View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14706_low_14 (Length: 343)
Name: NF14706_low_14
Description: NF14706
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14706_low_14 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 322; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 14 - 343
Target Start/End: Complemental strand, 1537464 - 1537135
Alignment:
| Q |
14 |
cctcctacacccaccacttttttcatcctcattaaaagacttatctctgctaatttaacccgtcaagccgttcgcgctttcaatgaaatcgaatcgtata |
113 |
Q |
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| T |
1537464 |
cctcctacacccaccacttttttcatcctcattaaaagacttatctctgctaatttaacccgtcaagccgttcgcgctttcaatgaaatcgaatcgtata |
1537365 |
T |
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| Q |
114 |
cagatactaaattaacatcagaccatttcacttacttgcttgacacgttatgtaagtatggttacgttaaacacgcttgcgagttgtttaacagaaattc |
213 |
Q |
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| T |
1537364 |
cagatactaaattaacatcagaccatttcacttacttgcttgacacgttatgtaagtatggttacgttaaacacgcttgcgagttgtttaacagaaattc |
1537265 |
T |
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| Q |
214 |
taatagatttgtagctgatgtcaaaatgtatactgttttgatatatggttggtgtaagattgtaaggtttaagacggcattgtcgtttttgaatgagatg |
313 |
Q |
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| T |
1537264 |
taatagatttgtagctgatgtcaaaatgtatactgttttgatatatggttggtgtaagattggaaggtttaagacggcattgtcgtttttgaatgagatg |
1537165 |
T |
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| Q |
314 |
aaggtgaaaggagttgacccaaatgttgtt |
343 |
Q |
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| T |
1537164 |
aaggtgaaaggagttgaaccaaatgttgtt |
1537135 |
T |
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