View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14707_low_1 (Length: 567)
Name: NF14707_low_1
Description: NF14707
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14707_low_1 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 510; Significance: 0; HSPs: 17)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 510; E-Value: 0
Query Start/End: Original strand, 15 - 564
Target Start/End: Original strand, 4864608 - 4865156
Alignment:
| Q |
15 |
aagttttgataagatgttgggtaaaaatgaagacgaacaaaaacaggcgaactagtgatggtagaaaatgaatatgtgaaacttgagagagagatacgcg |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4864608 |
aagttttgataagatgttgggtaaaaatgaagacgaacaaaaacaggcgaactagtgatggtagaaaatgaatatgtgaaacttgagagagagatacgcg |
4864707 |
T |
|
| Q |
115 |
cggttgtgtatggaatttcgatgtttgaagcggaactaggtgatgttttaagagatgggtttgtggttttttgttcaatgaaagtaaagagatttttgtt |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4864708 |
cggttgtgtatggaatttcgatgtttgaagcggaactaggtgatgttttaagagatgggtttgtggttttttgttcaatgaaagtaaagagatttttgtt |
4864807 |
T |
|
| Q |
215 |
atcaatattatcaccaacccaaattcgtttatctaaggtagtatttgttgtggagccacaaccgatggctaaactgaaatcagggctgtatgctattgat |
314 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4864808 |
atcaatattatcaccaacccaaattcgtttatctaaggtagtatttgttgaggagccacaaccgatggctaaactgaaatcagggctgtatgctattgat |
4864907 |
T |
|
| Q |
315 |
ttagctactnnnnnnnnngaataggaaaaggagagatagtagggtgattttagtgtaaagtttcttgtttatcgagtttgccatagttgtgtgagaagag |
414 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4864908 |
ttagctact-aaaaaaaagaataggaaaaggagagatagtagggtgattttagtgtaaagtttcttgtttatcgagtttgccatagttgtgtgagaagag |
4865006 |
T |
|
| Q |
415 |
ggtgaagaaggattgattatgttgttgttgttgaggtttggaatgctagaagttacatttatttattcttataaacattgagaggtaggaagggaaattt |
514 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
4865007 |
ggtgaagaaggattgattatgttgttgttgttgaggtttggaatgctagaagttacatttatttattcttataaacattgaaaggtaggaagggaaattt |
4865106 |
T |
|
| Q |
515 |
ctgtgaaattgacaactttgaaatggtcaaaagatctctttgttacaaaa |
564 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4865107 |
ctgtgaaattgacaactttgaaatggtcaaaagatctctttgttacaaaa |
4865156 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 15 - 487
Target Start/End: Complemental strand, 4711496 - 4711028
Alignment:
| Q |
15 |
aagttttgataagatgttgggtaaaaatgaagacgaacaaaaacaggcgaactagtgatggtagaaaatgaatatgtgaaacttgagagagagatacgcg |
114 |
Q |
| |
|
|||||||| || || ||||||||||||||||| | || ||||||||| | |||||||| |||||||||| ||||||||| |||||||||||||||||| |
|
|
| T |
4711496 |
aagttttggtatgaagttgggtaaaaatgaaggctaataaaaacaggggtgttagtgatgctagaaaatgagtatgtgaaatttgagagagagatacgcg |
4711397 |
T |
|
| Q |
115 |
cggttgtgtatggaatttcgatgtttgaagcggaactaggtgatgttttaagagatgggtttgtggttttttgttcaatgaaagtaaagagatttttgtt |
214 |
Q |
| |
|
|||||||| |||||| ||||| || ||| |||| ||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||| ||| |
|
|
| T |
4711396 |
cggttgtgagtggaatatcgatattggaaagggaattaggtgatgatttaagagatgggtttgtggtttttggttcaatgaaggtaaagagatttgagtt |
4711297 |
T |
|
| Q |
215 |
atcaatattatcaccaacccaaattcgtttatctaag---gtagtatttgttgtggagccacaaccgatggctaaactgaaatcagggctgtatgctatt |
311 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||| ||||| ||||||| | |||||||| |||||||||| || |||||||| |||| | |
|
|
| T |
4711296 |
atcaatattatcaccaacccaaattcgactatctaaggcagtagtgtttgttgagaagccacaattgatggctaaattgtaatcagggttgta------t |
4711203 |
T |
|
| Q |
312 |
gatttagctactnnnnnnnnngaataggaaaaggagagatagtagggtgattttagtgtaaagtttcttgtttatcgagtttgccatagttgtgtgagaa |
411 |
Q |
| |
|
|| ||||| ||| || || ||| ||||||||||||||| |||||||||| || ||| | |||||| ||||||||||||||| ||||| || |
|
|
| T |
4711202 |
gagttagcaactagagggaac-aagagcaaatagagagatagtagggtaattttagtgtgaaatttttcgtttatggagtttgccatagttatgtgaaaa |
4711104 |
T |
|
| Q |
412 |
gagggtgaagaaggattgattatgttgttgttgttgaggtttggaatgctagaagttacatttatttattcttata |
487 |
Q |
| |
|
|| ||||||||| | |||| |||| || |||||||| || | ||||| |||||| |||||||||||| ||||| |
|
|
| T |
4711103 |
tagagtgaagaagagtagattttgtttttcttgttgagtgttaggatgcttgaagttgcatttatttattgttata |
4711028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 15 - 424
Target Start/End: Original strand, 4637537 - 4637942
Alignment:
| Q |
15 |
aagttttgataagatgttgggtaaaaatgaagacgaacaaaaacaggcgaactagtgatggtagaaaatgaatatgtgaaacttgagagagagatacgcg |
114 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||| |||||||| ||| |||||||| |||||||||| ||||||||| |||||||||| | ||| | |
|
|
| T |
4637537 |
aagttttgataagatgtagggtaaaaatgaagacgaagaaaaacagtggaattagtgatgctagaaaatgagtatgtgaaatttgagagagaaacacgtg |
4637636 |
T |
|
| Q |
115 |
cggttgtgtatggaatttcgatgtttgaagcggaactaggtgatgttttaagagatgggtttgtggttttttgttcaatgaaagtaaagagatttttgtt |
214 |
Q |
| |
|
|| ||||||||||| || ||| ||||| |||| ||| | | |||| ||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
4637637 |
cgtgtgtgtatggaacttggatatttgagagggaattagcttgtacattaaaagatgggtttgtggtttttggttcaatgaaagtaaagagatttttgtt |
4637736 |
T |
|
| Q |
215 |
atcaatattatcaccaacccaaattcgtttatctaaggtagtattt---gttgtggagccacaaccgatggctaaactgaaatcagggctgtatgctatt |
311 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||| |||||||||| || |||||||| |||||| |
|
|
| T |
4637737 |
attaatattatcaccaacccaaattcgtttatctaaggcagtattgtcggttaaggagccacaattgatggctaaattgtaatcagggttgtatg----- |
4637831 |
T |
|
| Q |
312 |
gatttagctactnnnnnnnnngaataggaaaaggagagatagtagggtgattttagtgtaaagtttcttgtttatcgagtttgccatagttgtgtgagaa |
411 |
Q |
| |
|
| ||||| ||| | ||| |||| ||| ||||||| | ||||||| ||||||| || |||||||| ||||||||||||| |||||||||| |
|
|
| T |
4637832 |
-agttagcaactaaagggaaa-agtagcaaaaagagggatagtatgctgatttttgtgtaaatgtttttgtttatggagtttgccatagctgtgtgagaa |
4637929 |
T |
|
| Q |
412 |
gagggtgaagaag |
424 |
Q |
| |
|
||| ||||||||| |
|
|
| T |
4637930 |
gagagtgaagaag |
4637942 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 18 - 306
Target Start/End: Original strand, 4654182 - 4654473
Alignment:
| Q |
18 |
ttttgataagatgttgggtaaaaatgaagacgaacaaaaacaggcgaactagtgatggtagaaaatgaatatgtgaaacttgagagagagatacgcgcgg |
117 |
Q |
| |
|
|||||||| || || |||||||||||||| || ||||||||| ||| |||||||| |||||||||| ||||||||| ||||||||||||||| |||| |
|
|
| T |
4654182 |
ttttgatacgaagtagggtaaaaatgaaggcggttaaaaacaggggaagtagtgatgttagaaaatgagtatgtgaaatatgagagagagatacgtgcgg |
4654281 |
T |
|
| Q |
118 |
ttgtgtatggaatttcgatgtttgaagcggaactaggtgatgttttaagagatgggtttgtggttttttgttcaatgaaagtaaagagatttttgttatc |
217 |
Q |
| |
|
||||| ||||||||| | ||||| ||||||| ||| |||| ||||||||||||| ||||||||| |||||||||||||||||| |||||||||||| |
|
|
| T |
4654282 |
ttgtgaatggaatttgagtatttgagagggaactacgtggtgttgtaagagatgggttcgtggtttttggttcaatgaaagtaaagatatttttgttatc |
4654381 |
T |
|
| Q |
218 |
aatattatcaccaacccaaattcgtttatctaaggtagta---tttgttgtggagccacaaccgatggctaaactgaaatcagggctgtatg |
306 |
Q |
| |
|
|||||| ||||||| ||||||||||||||||||||||||| | |||| |||||||||| |||| |||||| || |||||||| |||||| |
|
|
| T |
4654382 |
aatattctcaccaatccaaattcgtttatctaaggtagtagtgtctgttagggagccacaatcgatagctaaattgtaatcagggttgtatg |
4654473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 30 - 306
Target Start/End: Complemental strand, 4845409 - 4845130
Alignment:
| Q |
30 |
gttgggtaaaaatgaagacgaacaaaaacaggcgaactagtgatggtagaaaatgaatatgtgaaacttgagagagagatacgcgcggttgtgtatggaa |
129 |
Q |
| |
|
||||||||||||||||| |||| ||||||||| ||||||| ||| |||||||||| ||||||||| |||||| ||||||| ||||||||||| |||||| |
|
|
| T |
4845409 |
gttgggtaaaaatgaaggcgaataaaaacaggggaactaggaatgctagaaaatgagtatgtgaaatttgagaaagagatatgcgcggttgtgaatggaa |
4845310 |
T |
|
| Q |
130 |
tttcgatgtttgaagcggaactaggtgatgttttaagagatgggtttgtggttttttgttcaatgaaagtaaagagatttttgttatcaatattatcacc |
229 |
Q |
| |
|
||| ||| || ||| |||| |||| |||| ||||| |||||| |||||||||||| |||||||||| |||||||||||| |||||||||||||||||| |
|
|
| T |
4845309 |
tttggatattggaaagggaattaggagatgatttaaaagatggatttgtggtttttggttcaatgaaggtaaagagatttgagttatcaatattatcacc |
4845210 |
T |
|
| Q |
230 |
aacccaaattcgtttatctaagg---tagtatttgttgtggagccacaaccgatggctaaactgaaatcagggctgtatg |
306 |
Q |
| |
|
|| |||||||||||||||||||| | | ||||||| ||| |||||| |||||||||| || |||||||| |||||| |
|
|
| T |
4845209 |
aatccaaattcgtttatctaaggcaacattgtttgttgaggaaccacaattgatggctaaattgtaatcagggttgtatg |
4845130 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 31 - 287
Target Start/End: Original strand, 4673402 - 4673664
Alignment:
| Q |
31 |
ttgggtaaaaatgaagacgaacaaaaacaggcgaactagtgatggtagaaaatgaatatgtgaaacttgagagagagatacgcgcggttgtgtatggaat |
130 |
Q |
| |
|
|||||||||||||||| |||| |||||||| ||| |||||||| |||||||||| ||||||||| |||||||||| | ||| ||| ||||||||||| |
|
|
| T |
4673402 |
ttgggtaaaaatgaaggcgaagaaaaacagtggaattagtgatgctagaaaatgagtatgtgaaatttgagagagaaacacgtgcgtgtgtgtatggaac |
4673501 |
T |
|
| Q |
131 |
ttcgatgtttgaagcggaactaggtgatgttttaagagatgggtttgtggttttttgttcaatgaaagtaaagagatttttgttatcaa---tattatca |
227 |
Q |
| |
|
|| ||| ||||| |||| ||||| |||| |||||||||||| |||||||||| ||||||||||||||||||||||| |||||| || |||||||| |
|
|
| T |
4673502 |
ttggatatttgagagggaattaggttgtgttgtaagagatgggtatgtggtttttggttcaatgaaagtaaagagatttgtgttattaatattattatca |
4673601 |
T |
|
| Q |
228 |
ccaacccaaattcgtttatctaaggtag---tatttgttgtggagccacaaccgatggctaaa |
287 |
Q |
| |
|
|||||||| ||||| ||||| ||||||| | ||||||| ||| |||||| |||||||||| |
|
|
| T |
4673602 |
ccaacccacattcggttatcgaaggtagcattgtttgttgaggaaccacaattgatggctaaa |
4673664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 33 - 287
Target Start/End: Complemental strand, 4696572 - 4696318
Alignment:
| Q |
33 |
gggtaaaaatgaagacgaacaaaaacaggcgaactagtgatggtagaaaatgaatatgtgaaacttgagagagagatacgcgcggttgtgtatggaattt |
132 |
Q |
| |
|
|||||||||||||| |||| ||||||||| ||| |||||||| ||| ||| || ||||||||| |||||||||||| ||| ||||||||| ||||||||| |
|
|
| T |
4696572 |
gggtaaaaatgaaggcgaagaaaaacaggggaagtagtgatgctaggaaaagagtatgtgaaatttgagagagagacacgtgcggttgtgaatggaattt |
4696473 |
T |
|
| Q |
133 |
cgatgtttgaagcggaactaggtgatgttttaagagatgggtttgtggttttttgttcaatgaaagtaaagagatttttgttatcaatattatcaccaac |
232 |
Q |
| |
|
||| ||||| || |||||| | || ||||||||| ||||||||||||| ||||| |||| | |||||| ||| |||||||| ||||||||||||| |
|
|
| T |
4696472 |
ggatatttgagagggtgttaggtggtattgtaagagatgtgtttgtggtttttggttcattgaaggaaaagagttttgtgttatcattattatcaccaac |
4696373 |
T |
|
| Q |
233 |
ccaaattcgtttatctaaggtagtatttgttgtggagccacaaccgatggctaaa |
287 |
Q |
| |
|
||| |||||||| || |||||||| | || || |||||||||| |||||||||| |
|
|
| T |
4696372 |
ccatattcgtttgtcgaaggtagtgtctgatgaggagccacaattgatggctaaa |
4696318 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 18 - 306
Target Start/End: Complemental strand, 4783244 - 4782950
Alignment:
| Q |
18 |
ttttgataagatgttgggtaaaaatgaagacgaacaaaaacaggcgaactagtgatggt---agaaaatgaatatgtgaaacttgagagagagatacgcg |
114 |
Q |
| |
|
|||||||| || ||||||||||||||||| |||| ||||| || || |||||||| | ||||||||| ||||||||| ||||||||||| ||| |
|
|
| T |
4783244 |
ttttgatatgaagttgggtaaaaatgaaggcgaagaaaaatagtggagttagtgatgatgttagaaaatgagtatgtgaaatttgagagagaggcacgta |
4783145 |
T |
|
| Q |
115 |
cggttgtgtatggaatttcgatgtttgaagcggaactaggtgatgttttaagagatgggtttgtggttttttgttcaatgaaagtaaagagatttttgtt |
214 |
Q |
| |
|
|||||||| ||||||||| ||| ||||| |||| ||||| ||||||||||||||||||||| ||||| |||||||||| | ||||||||| ||| |
|
|
| T |
4783144 |
cggttgtgaatggaatttggatatttgagagggaattaggttttgttttaagagatgggtttgtattttttggttcaatgaaggaaaagagattagagtt |
4783045 |
T |
|
| Q |
215 |
atcaatattatcaccaacccaaattcgtttatctaag---gtagtatttgttgtggagccacaaccgatggctaaactgaaatcagggctgtatg |
306 |
Q |
| |
|
|||||| |||||| |||||||||||||| ||| ||| ||||| ||||||| ||||||||||| ||||||||||||| |||||||| |||||| |
|
|
| T |
4783044 |
atcaatgttatcaacaacccaaattcgtccatcaaaggcagtagtgtttgttgaggagccacaactgatggctaaactgtaatcagggttgtatg |
4782950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 18 - 306
Target Start/End: Complemental strand, 4815673 - 4815379
Alignment:
| Q |
18 |
ttttgataagatgttgggtaaaaatgaagacgaacaaaaacaggcgaactagtgatggt---agaaaatgaatatgtgaaacttgagagagagatacgcg |
114 |
Q |
| |
|
|||||||| || ||||||||||||||||| |||| ||||| || || |||||||| | ||||||||| ||||||||| ||||||||||| ||| |
|
|
| T |
4815673 |
ttttgatatgaagttgggtaaaaatgaaggcgaagaaaaatagtggagttagtgatgatgttagaaaatgagtatgtgaaatttgagagagaggcacgtc |
4815574 |
T |
|
| Q |
115 |
cggttgtgtatggaatttcgatgtttgaagcggaactaggtgatgttttaagagatgggtttgtggttttttgttcaatgaaagtaaagagatttttgtt |
214 |
Q |
| |
|
|||||||| ||||||||| | | ||||| |||| ||||| ||||||||||||||||||||| ||||| |||||||||| | ||||||||| ||| |
|
|
| T |
4815573 |
cggttgtgaatggaatttgggtatttgagagggaattaggttttgttttaagagatgggtttgtattttttggttcaatgaaggaaaagagattagagtt |
4815474 |
T |
|
| Q |
215 |
atcaatattatcaccaacccaaattcgtttatctaag---gtagtatttgttgtggagccacaaccgatggctaaactgaaatcagggctgtatg |
306 |
Q |
| |
|
|||||| |||||| |||||||||||||| ||| ||| ||||| ||||||| ||||||||||| ||||||||||||| |||||||| |||||| |
|
|
| T |
4815473 |
atcaatgttatcaacaacccaaattcgtccatcaaaggcagtagtgtttgttgaggagccacaactgatggctaaactgtaatcagggttgtatg |
4815379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 18 - 285
Target Start/End: Original strand, 4644381 - 4644648
Alignment:
| Q |
18 |
ttttgataagatgttgggtaaaaatgaagacgaacaaaaacaggcgaactagtgatggtagaaaatgaatatgtgaaacttgagagagagatacgcgcgg |
117 |
Q |
| |
|
|||||||| |||| |||||||||| ||| |||| ||||||||| ||| ||||||| |||||||||| ||||| ||| |||||| ||||| ||| ||| |
|
|
| T |
4644381 |
ttttgatacgatgcagggtaaaaataaaggcgaagaaaaacaggggaaacagtgatgctagaaaatgagtatgtaaaatttgagaaagagacacgtgcgt |
4644480 |
T |
|
| Q |
118 |
ttgtgtatggaatttcgatgtttgaagcggaactaggtgatgttttaagagatgggtttgtggttttttgttcaatgaaagtaaagagatttttgttatc |
217 |
Q |
| |
|
||||||||||| | || |||| ||| || ||||||||||| ||||||| || ||||||||| ||||||||||||||||||| ||| ||||||| |
|
|
| T |
4644481 |
gtgtgtatggaactgtgaaatttgg---ggatttaagtgatgttttaggagatggattagtggtttttggttcaatgaaagtaaagagttttgtgttatc |
4644577 |
T |
|
| Q |
218 |
aatattatcaccaacccaaattcgtttatctaag---gtagtatttgttgtggagccacaaccgatggcta |
285 |
Q |
| |
|
| |||||||||||||||||||||| |||||||| ||||| || |||| ||||||||||| ||||||| |
|
|
| T |
4644578 |
attattatcaccaacccaaattcgactatctaaggcagtagtgttcgttgaggagccacaactaatggcta |
4644648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 351 - 444
Target Start/End: Original strand, 4673721 - 4673814
Alignment:
| Q |
351 |
tagtagggtgattttagtgtaaagtttcttgtttatcgagtttgccatagttgtgtgagaagagggtgaagaaggattgattatgttgttgttg |
444 |
Q |
| |
|
||||||||||||||| |||||| ||| |||||||| ||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||| |
|
|
| T |
4673721 |
tagtagggtgatttttgtgtaattttttttgtttatggagtttgccatagctgtgtgagaagagggtgaagaagggttgattctgttgttgttg |
4673814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 15 - 240
Target Start/End: Original strand, 4663373 - 4663604
Alignment:
| Q |
15 |
aagttttgataagatgttgggtaaaaatgaagacgaacaaaaacaggcgaactagtgatggtagaaaatgaatatgtgaaacttgagagagagatacgcg |
114 |
Q |
| |
|
||||||| ||||||||||| |||||||||||| |||| ||||||||| |||||| |||||||| |||||| ||||||||| ||||||| |||||||| | |
|
|
| T |
4663373 |
aagtttttataagatgttgagtaaaaatgaaggcgaagaaaaacagggcaactagggatggtaggaaatgagtatgtgaaatttgagagcgagatacgtg |
4663472 |
T |
|
| Q |
115 |
cggttgtgtatggaatttcgatgtttgaagcggaactagg------tgatgttttaagagatgggtttgtggttttttgttcaatgaaagtaaagagatt |
208 |
Q |
| |
|
||||| || ||||||| ||| |||||| | || | | ||| |||||||||||| ||| | |||||| | |||| ||||| |||||| | |
|
|
| T |
4663473 |
cggttttgagtggaattgggatatttgaaaggtaatcatggggtagtgacaatttaagagatggattttttgtttttggctcaaggaaagaaaagagttc |
4663572 |
T |
|
| Q |
209 |
tttgttatcaatattatcaccaacccaaattc |
240 |
Q |
| |
|
| |||||||| ||||||||||||||||||||| |
|
|
| T |
4663573 |
tgtgttatcattattatcaccaacccaaattc |
4663604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 340 - 424
Target Start/End: Original strand, 4644696 - 4644780
Alignment:
| Q |
340 |
aaaaggagagatagtagggtgattttagtgtaaagtttcttgtttatcgagtttgccatagttgtgtgagaagagggtgaagaag |
424 |
Q |
| |
|
|||| |||||| |||| | ||||||| |||||| ||| |||||||| | ||||||||||||||||||||||||| ||||||||| |
|
|
| T |
4644696 |
aaaatgagagaaagtatgctgatttttgtgtaattttttttgtttatggtgtttgccatagttgtgtgagaagagagtgaagaag |
4644780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 348 - 406
Target Start/End: Complemental strand, 4845095 - 4845037
Alignment:
| Q |
348 |
agatagtagggtgattttagtgtaaagtttcttgtttatcgagtttgccatagttgtgt |
406 |
Q |
| |
|
||||||||||||||||||||||| || ||| |||||||| ||||||| ||||||||||| |
|
|
| T |
4845095 |
agatagtagggtgattttagtgtgaaattttttgtttatggagtttggcatagttgtgt |
4845037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 334 - 423
Target Start/End: Original strand, 4654494 - 4654583
Alignment:
| Q |
334 |
aataggaaaaggagagatagtagggtgattttagtgtaaagtttcttgtttatcgagtttgccatagttgtgtgagaagagggtgaagaa |
423 |
Q |
| |
|
||||| |||| ||||||||||| | | ||||| ||||||| || |||||||| |||||||||||| ||||||||||||| |||||||| |
|
|
| T |
4654494 |
aatagcaaaaagagagatagtatgctcatttttgtgtaaatgtttttgtttatggagtttgccatatctgtgtgagaagagtgtgaagaa |
4654583 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 334 - 422
Target Start/End: Complemental strand, 4696278 - 4696190
Alignment:
| Q |
334 |
aataggaaaaggagagatagtagggtgattttagtgtaaagtttcttgtttatcgagtttgccatagttgtgtgagaagagggtgaaga |
422 |
Q |
| |
|
||||| |||| ||||||||| ||| |||||||||||| || ||| |||||| | ||||||||||||||| | ||| ||||| ||||||| |
|
|
| T |
4696278 |
aatagcaaaatgagagatagcaggatgattttagtgtgaaattttttgtttctggagtttgccatagttctctgataagagagtgaaga |
4696190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 4667621 - 4667701
Alignment:
| Q |
15 |
aagttttgataagatgttgggtaaaaatgaagacgaacaaaaacaggcgaactagtgatggtagaaaatgaatatgtgaaa |
95 |
Q |
| |
|
||||||||||| ||||||||||||||||| || |||| ||||||||| |||| |||| | ||||||||| |||||||| |
|
|
| T |
4667621 |
aagttttgatacgatgttgggtaaaaatggaggcgaagaaaaacagggccactattgatcggagaaaatgagaatgtgaaa |
4667701 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 18925157 - 18925115
Alignment:
| Q |
15 |
aagttttgataagatgttgggtaaaaatgaagacgaacaaaaa |
57 |
Q |
| |
|
||||||||||| |||||||||||||||||||| |||| ||||| |
|
|
| T |
18925157 |
aagttttgatacgatgttgggtaaaaatgaaggcgaagaaaaa |
18925115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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