View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14707_low_3 (Length: 369)
Name: NF14707_low_3
Description: NF14707
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14707_low_3 |
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Alignment Details
Target: chr8 (Bit Score: 335; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 335; E-Value: 0
Query Start/End: Original strand, 14 - 352
Target Start/End: Complemental strand, 7416280 - 7415942
Alignment:
| Q |
14 |
ataatactattaagtattaaataaatatcatgtcaatttttcaaaatagaaattattatccttagtgcatgggtgggtggtccaattgatgcttgcatct |
113 |
Q |
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| T |
7416280 |
ataatactattaagtattaaataaatatcatgtcaatttttcaaaatagaaattattatccttagtgcatgggtgggtggtccaattgatgcttgcatct |
7416181 |
T |
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| Q |
114 |
tcgtggaaatgatgggaagttgaaaagtcatatttctaaaacaaaaatccaaaccataatttagagattaactgtttaacgcaattccagttttgcttga |
213 |
Q |
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| T |
7416180 |
tcgtggaaatgatgggaagttgaaaagtcatatttctaaaacaaaaatccaaaccataatttagagattaactgtttaacgcaattccagttttgcttga |
7416081 |
T |
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| Q |
214 |
tagctccaaatatcacttatttattcaatatattgtattcgtggggctaactaaattaacttgctcttatcttgccacatttgttacccttatgtctgta |
313 |
Q |
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| T |
7416080 |
tagctccaaatatcacttatttattcaatatattgtattcgtggggctaactaaattaacttgctcttatcttgccacatttgttacccttatgtctgta |
7415981 |
T |
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| Q |
314 |
tattttttatttactaattatacaagtcgtgccaagttt |
352 |
Q |
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| T |
7415980 |
tattttttatttactaattatacaagtggtgccaagttt |
7415942 |
T |
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