View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14708_high_7 (Length: 234)
Name: NF14708_high_7
Description: NF14708
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14708_high_7 |
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Alignment Details
Target: chr3 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 28810126 - 28810358
Alignment:
| Q |
1 |
atattacccttatgtgcaaaaatcatataatatcaagcatggctttgattaatgttgtcgtgcttgtgagagacatgattaagatgattttgttggctta |
100 |
Q |
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| T |
28810126 |
atattacccttatgtgcaaaaatcatataatatcaagcatggctttgattaatgttgtcgtgcttgtgagagacatgattaagatgattttgttggctta |
28810225 |
T |
|
| Q |
101 |
aagattaatgtggtcttttgttttgatgttgtttctatatgacattaacaagaataattgagattttgtacttttagagtctacttgtttctatcgatct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
28810226 |
aagattaatgtggtcttttgttttgatgttgtttctatatgacattaacaagaataattgagattttgtacttttatagtctacttgtttctatcgatct |
28810325 |
T |
|
| Q |
201 |
ttttcgaattaaaggtgttgtttacggtagaca |
233 |
Q |
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||||||||||||||||||||||||||| ||||| |
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| T |
28810326 |
ttttcgaattaaaggtgttgtttacgggagaca |
28810358 |
T |
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