View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14708_low_7 (Length: 253)
Name: NF14708_low_7
Description: NF14708
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14708_low_7 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 10 - 253
Target Start/End: Original strand, 37560783 - 37561026
Alignment:
| Q |
10 |
tccaagaatattcaacttcttcaacaacaaaattcatctattaatttattgttatatccaaacaataatacctgcattactgaaccaaaaccttacatca |
109 |
Q |
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| T |
37560783 |
tccaacaatattcaacttcttcaacaacaaaattcatctattaatttattgttatatccaaacaataatacctgcattactgaaccaaaaccttacataa |
37560882 |
T |
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| Q |
110 |
cacattcaacaaattcaaccacattcgtttcattggtttttcgcctttaattgcactttttcatcacacaataatttattggcagttacaacattttcca |
209 |
Q |
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| T |
37560883 |
cacattcaacaaattcaaccacattcgtttcattggtttttcgcctttaattgcactttttcatcacacaataatttataggcagttacaacattttcca |
37560982 |
T |
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| Q |
210 |
caagttcaacgaatatttgttacaataactttaaacctaaaggt |
253 |
Q |
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| T |
37560983 |
caagttcaacgaattattgttacactaactttaaacctaaaggt |
37561026 |
T |
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