View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14709_low_16 (Length: 233)
Name: NF14709_low_16
Description: NF14709
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14709_low_16 |
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Alignment Details
Target: chr7 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 46 - 216
Target Start/End: Original strand, 41809588 - 41809759
Alignment:
| Q |
46 |
cggtagacgttcacaatatcatgaggtgtgacatcctccttccatatgttaaggtcaatcctagtaaatatgaaagcgaataacacattacatatacaca |
145 |
Q |
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| T |
41809588 |
cggtagaagttcacaatatcacgaggcgtgacatcctccttccatattttaaggtcaatcctagtaaatatgaaagggaataacacattacatatacaca |
41809687 |
T |
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| Q |
146 |
tgaatagtgc-aaagacaatggaaattaacgaaccaaaaccttaatcgatcctaagatcccaacaacttgct |
216 |
Q |
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|||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
41809688 |
tgaatagtgcaaaagacaatggaaattaacaaaccaaaaccttaatcgatcctaagatcccaacaacttgct |
41809759 |
T |
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