View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1470_low_11 (Length: 282)
Name: NF1470_low_11
Description: NF1470
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1470_low_11 |
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Alignment Details
Target: chr2 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 18 - 261
Target Start/End: Original strand, 13580662 - 13580905
Alignment:
| Q |
18 |
atacttgctattacttgtttcatttgggttgttataatgcgtgctacatctgaaattcattcctgtatcagtagcttttacaacttggttgaaacacaat |
117 |
Q |
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| T |
13580662 |
atactcgctattacttgcttcatttgggtggttataatgcgtgctacatctgaaattcagtcctgtatcggtatcttttacaacttggtagaaacgtgat |
13580761 |
T |
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| Q |
118 |
tttccaagcgaatcaaggccattcacagtgagaatggccctgcgtttttccttaaaacagtttcatgcctccaaaggcatcgtttatcaaactagccgtg |
217 |
Q |
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| T |
13580762 |
tttccaagcgaatcaagcccattcacagtgataatggccctgcgtttttccttaaaacagtttcatgcctccaaaggcattgtttatcaaactagccgtg |
13580861 |
T |
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| Q |
218 |
aggaaatgccacagcagaatggtcgtgttgagaggtgtcatcag |
261 |
Q |
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| T |
13580862 |
aggaaatgccacagcagaatggtcgtgttgagaggtgtcatcag |
13580905 |
T |
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