View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1470_low_15 (Length: 261)
Name: NF1470_low_15
Description: NF1470
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1470_low_15 |
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Alignment Details
Target: chr5 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 10821661 - 10821417
Alignment:
| Q |
1 |
tcctaacaccgcctttgcaagcatcaaacctggcctatgaaactcaatccaatcaatcaaatccaaataatgttcctcattactaacctttgaaattgca |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10821661 |
tcctaacaccgcctttgcaagcatcaaacctggcctatgaaactcaatccaatcaatcaaatccaaataatgttcctcattactaacctttgaaattgca |
10821562 |
T |
|
| Q |
101 |
tcatgaactatttcaccaatgtctgataatgaaccttccttcaattcttgaatccttgcctcaccgaaagccaaagacaatacattaccgatgtaattcg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10821561 |
tcatgaactatttcaccaatgtctgataatgaaccttccttcaattcttgaatccttgcctcaccgaaagccaaagacaatacattaccgatgtaattcg |
10821462 |
T |
|
| Q |
201 |
acattgaatttttgcttacactcattctttctcttccatctacta |
245 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10821461 |
acattgaatttttgcttacactcattctttctcttccatctacta |
10821417 |
T |
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