View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1470_low_16 (Length: 260)
Name: NF1470_low_16
Description: NF1470
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1470_low_16 |
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Alignment Details
Target: chr4 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 43540457 - 43540690
Alignment:
| Q |
1 |
ttaagggaaggagagtttgtgaagaaaaatgcaccaaagacatgtgatgttacattgatttacaatggtgaattgtttgtgtatgagattgatgctttta |
100 |
Q |
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| T |
43540457 |
ttaagggaaggagagtttgtgaagaaaaatgcaccaaagacatgtgatgttacattgatttacaatggtgaattgtttgtgtatgagattgatgctttta |
43540556 |
T |
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| Q |
101 |
tggatgaatgccaatcacaaagtaaatatcactcaaaatgcaacttctttcatcagtgtatttgcttttcaggcaagtcaagttaattatggctttcttt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43540557 |
tggatgaatgccaatcacaaagtaaatatcactcaaaatgcaacttctttcatcagtgtatttgcttttcaggcaagtcaagttaattatggctttcttt |
43540656 |
T |
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| Q |
201 |
aaattaatatcatagcatagcatgtataattcta |
234 |
Q |
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|||||||||||||||||||||| ||||||||||| |
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| T |
43540657 |
aaattaatatcatagcatagcaggtataattcta |
43540690 |
T |
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