View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1470_low_5 (Length: 389)
Name: NF1470_low_5
Description: NF1470
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1470_low_5 |
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Alignment Details
Target: chr8 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 103 - 373
Target Start/End: Original strand, 1574946 - 1575208
Alignment:
| Q |
103 |
ttatttgagagttagattatgaagaagtatatgagtgtgtagggaaaaaagtgggagaatggaacatccatcgtttctctcatcacattattttaggaca |
202 |
Q |
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| T |
1574946 |
ttatttgagagttagattatgaagaagtatatgagtgtgtagggaaaaaagtgggagaatggaacatccatcgtttctctcatcacattattttaggaca |
1575045 |
T |
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| Q |
203 |
taagttgtatagcttgatggttctannnnnnnnnnnnnnnnnnnnnataatcaattggtcaagagaaaaatcattttagaaaggtttcaacgagtgagtg |
302 |
Q |
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| T |
1575046 |
taagttgtatagcttgatggttcta--------tttttttatttttataatcaattggtcaagagaaaaatcattttagaaaggtttcaacgagtgagtg |
1575137 |
T |
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| Q |
303 |
aaggtttgttattagaattaagttttgtttgtttaagatgaacggcatactctggtgtaaccaacatatca |
373 |
Q |
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| T |
1575138 |
aaggtttgttattagaattaagttttgtttgtttaagatcaacggcatactctggtgtaaccaacatatca |
1575208 |
T |
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