View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14710_high_4 (Length: 247)
Name: NF14710_high_4
Description: NF14710
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14710_high_4 |
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Alignment Details
Target: chr3 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 30784022 - 30784263
Alignment:
| Q |
1 |
gctattctcttctttctctctaacccctacgctcctatagtatttttatataagtcagttgaaatccaaaatcagttctatgtccataatctgcctataa |
100 |
Q |
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| T |
30784022 |
gctattctcttctttctctctaacccctacgctcctatagtatttttatataagtcagttgaaatccaaaatcagttctatgtcaataatctgcctataa |
30784121 |
T |
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| Q |
101 |
ctaattaacataactatcaattagttaattaatcaccagtcatatcaataaccttcaattatttgaaagctaatatgagataaaaacacacttttaaaaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
30784122 |
ctaattaacataactatcaattagttaattaatcaccagtcatatcaataaccttcaattatttgaaagctaatatgagataaaaacacactttttaaaa |
30784221 |
T |
|
| Q |
201 |
accatattccccccaaaaattccaataatagcatagaataat |
242 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||| |
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| T |
30784222 |
accatactccccccaaaaattccaataatagcatagaataat |
30784263 |
T |
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