View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14711_high_16 (Length: 286)
Name: NF14711_high_16
Description: NF14711
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14711_high_16 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 19 - 286
Target Start/End: Original strand, 5688095 - 5688362
Alignment:
| Q |
19 |
ctaaacccattaaaaagccaatgatatctttcatttcaacctttcttctcaattggtgacaaaatgccaataaaatcaccattaatataccacaaaatat |
118 |
Q |
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| T |
5688095 |
ctaaacccattaaaaagccaaggatatctttcatttcaacctttcttctcaattggtgacaaaatgccaataaaatcaccattaatataccacaaaatat |
5688194 |
T |
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| Q |
119 |
ttaagacatgagcaaatttcctccaccacttcacccttccggattaatagtaaagcaaaaacctaactagtatcttaattcgtcaatcttcttcgaattt |
218 |
Q |
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||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5688195 |
ttaagacatgagcaagtttcatccaccagttcacccttccggattaatagtaaagcaaaaacctaactagtatcttaattcgtcaatcttcttcgaattt |
5688294 |
T |
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| Q |
219 |
gataaagttcacaaagaaatagtacatgtggcttatatactcagaagatgtattttaaattagaaatt |
286 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5688295 |
gataaagttcacaaagaaatagtacatgtggcttatatactcagaagatgtattttaaattagaaatt |
5688362 |
T |
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