View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14712_high_1 (Length: 627)

Name: NF14712_high_1
Description: NF14712
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14712_high_1
NF14712_high_1
[»] chr1 (115 HSPs)
chr1 (192-499)||(34849024-34849329)
chr1 (363-499)||(34850344-34850480)
chr1 (15-122)||(34849399-34849506)
chr1 (371-499)||(6367575-6367703)
chr1 (375-499)||(25647897-25648021)
chr1 (371-499)||(4960553-4960681)
chr1 (371-499)||(17662137-17662265)
chr1 (375-491)||(26024444-26024560)
chr1 (401-499)||(30711644-30711742)
chr1 (374-499)||(42248486-42248611)
chr1 (371-499)||(13914354-13914482)
chr1 (371-499)||(40210657-40210785)
chr1 (371-490)||(48691170-48691289)
chr1 (377-499)||(19515832-19515954)
chr1 (401-499)||(40435358-40435456)
chr1 (375-499)||(183482-183607)
chr1 (371-491)||(32917547-32917667)
chr1 (371-499)||(24009828-24009956)
chr1 (371-499)||(30711340-30711468)
chr1 (371-499)||(34464736-34464864)
chr1 (375-499)||(47999383-47999507)
chr1 (400-499)||(6367878-6367977)
chr1 (400-499)||(43759138-43759237)
chr1 (377-499)||(23209620-23209742)
chr1 (377-499)||(36694541-36694663)
chr1 (377-499)||(36710642-36710764)
chr1 (376-489)||(10303946-10304059)
chr1 (378-499)||(19017923-19018044)
chr1 (402-499)||(37578205-37578302)
chr1 (383-499)||(14878984-14879100)
chr1 (403-499)||(36694295-36694391)
chr1 (403-499)||(36710396-36710492)
chr1 (371-499)||(37578479-37578607)
chr1 (383-499)||(40772520-40772636)
chr1 (383-491)||(41098754-41098862)
chr1 (400-499)||(183234-183333)
chr1 (400-499)||(13914081-13914180)
chr1 (400-499)||(17661865-17661963)
chr1 (400-499)||(26024708-26024807)
chr1 (400-499)||(35473644-35473743)
chr1 (400-499)||(47999136-47999235)
chr1 (401-499)||(34464462-34464560)
chr1 (401-499)||(41099050-41099148)
chr1 (397-493)||(17691238-17691334)
chr1 (399-499)||(17692500-17692600)
chr1 (383-499)||(1103472-1103590)
chr1 (400-499)||(1103777-1103876)
chr1 (371-498)||(9443586-9443713)
chr1 (400-499)||(40210383-40210482)
chr1 (404-499)||(49723046-49723141)
chr1 (375-485)||(28011390-28011500)
chr1 (397-499)||(31197078-31197175)
chr1 (372-429)||(16970823-16970880)
chr1 (438-499)||(35152684-35152745)
chr1 (398-499)||(46899074-46899175)
chr1 (400-493)||(49955661-49955754)
chr1 (400-488)||(4960825-4960913)
chr1 (401-493)||(17188973-17189065)
chr1 (383-499)||(35152356-35152472)
chr1 (401-493)||(40714463-40714555)
chr1 (371-490)||(1841481-1841600)
chr1 (398-493)||(5734029-5734123)
chr1 (400-499)||(7820967-7821066)
chr1 (404-499)||(24009588-24009683)
chr1 (371-494)||(32917278-32917401)
chr1 (371-498)||(42267317-42267444)
chr1 (410-489)||(44522170-44522249)
chr1 (376-498)||(10304147-10304269)
chr1 (433-499)||(13300253-13300319)
chr1 (363-449)||(25065909-25065995)
chr1 (385-499)||(46163043-46163157)
chr1 (438-499)||(14879312-14879373)
chr1 (402-499)||(19017642-19017739)
chr1 (400-493)||(20760819-20760912)
chr1 (398-487)||(32132329-32132418)
chr1 (400-493)||(35038474-35038567)
chr1 (438-499)||(42533037-42533098)
chr1 (398-499)||(46899914-46900015)
chr1 (371-499)||(13245863-13245991)
chr1 (400-499)||(1841775-1841873)
chr1 (371-426)||(22103793-22103848)
chr1 (375-493)||(24905427-24905544)
chr1 (400-494)||(45749860-45749954)
chr1 (405-499)||(48692335-48692429)
chr1 (398-499)||(5735025-5735126)
chr1 (400-493)||(31050969-31051062)
chr1 (438-499)||(40772813-40772874)
chr1 (371-426)||(21444680-21444735)
chr1 (371-422)||(43758912-43758963)
chr1 (400-499)||(48779435-48779534)
chr1 (403-493)||(30326515-30326605)
chr1 (375-421)||(31514577-31514623)
chr1 (400-489)||(32133239-32133329)
chr1 (375-421)||(33442854-33442900)
chr1 (371-493)||(44523423-44523545)
chr1 (400-493)||(8898536-8898629)
chr1 (372-433)||(13295214-13295275)
chr1 (400-493)||(24905186-24905279)
chr1 (400-493)||(37929437-37929530)
chr1 (400-493)||(40714757-40714850)
chr1 (404-493)||(45750160-45750249)
chr1 (400-493)||(49955366-49955459)
chr1 (400-499)||(7821270-7821368)
chr1 (437-480)||(42534369-42534412)
chr1 (375-421)||(4716728-4716774)
chr1 (465-499)||(6518177-6518211)
chr1 (405-499)||(7231570-7231664)
chr1 (398-499)||(40439503-40439604)
chr1 (375-421)||(52134159-52134205)
chr1 (408-493)||(17189173-17189258)
chr1 (400-493)||(28011653-28011746)
chr1 (400-493)||(32558421-32558514)
chr1 (401-493)||(8898832-8898924)
chr1 (371-427)||(25065018-25065074)
chr1 (401-493)||(28324824-28324915)
[»] chr4 (127 HSPs)
chr4 (192-426)||(48529671-48529918)
chr4 (15-122)||(48529494-48529601)
chr4 (371-499)||(24349687-24349815)
chr4 (371-499)||(14801749-14801877)
chr4 (375-499)||(13058050-13058174)
chr4 (383-499)||(50418936-50419052)
chr4 (395-499)||(7451847-7451951)
chr4 (395-499)||(10781795-10781899)
chr4 (383-499)||(24711124-24711240)
chr4 (371-499)||(34765667-34765795)
chr4 (371-499)||(35028285-35028413)
chr4 (371-494)||(41582465-41582588)
chr4 (375-499)||(43155787-43155911)
chr4 (375-499)||(49879467-49879591)
chr4 (400-499)||(7452119-7452218)
chr4 (371-494)||(41583518-41583641)
chr4 (376-499)||(44967330-44967453)
chr4 (400-499)||(50418681-50418780)
chr4 (400-499)||(51692835-51692934)
chr4 (372-499)||(55867402-55867529)
chr4 (378-492)||(37248256-37248370)
chr4 (375-499)||(18831362-18831486)
chr4 (375-499)||(23613322-23613446)
chr4 (371-499)||(53701825-53701953)
chr4 (400-499)||(148071-148170)
chr4 (398-489)||(32063650-32063741)
chr4 (371-494)||(40387485-40387608)
chr4 (400-499)||(44967082-44967181)
chr4 (375-493)||(27934551-27934669)
chr4 (401-499)||(35028011-35028109)
chr4 (401-486)||(11448046-11448131)
chr4 (375-499)||(36009104-36009229)
chr4 (375-499)||(5368960-5369084)
chr4 (371-499)||(17356209-17356337)
chr4 (565-621)||(38735557-38735613)
chr4 (371-499)||(52909266-52909394)
chr4 (400-499)||(13058298-13058397)
chr4 (404-499)||(18831637-18831732)
chr4 (400-499)||(24350748-24350847)
chr4 (400-499)||(39539234-39539333)
chr4 (400-499)||(49879220-49879319)
chr4 (375-493)||(9400779-9400897)
chr4 (401-499)||(24711397-24711495)
chr4 (405-499)||(43155542-43155636)
chr4 (437-499)||(48528498-48528560)
chr4 (383-499)||(54086994-54087110)
chr4 (404-499)||(1179120-1179215)
chr4 (404-499)||(10780726-10780821)
chr4 (404-499)||(10974335-10974430)
chr4 (400-499)||(34765393-34765492)
chr4 (400-499)||(37248521-37248620)
chr4 (400-499)||(46661230-46661329)
chr4 (400-499)||(54086708-54086807)
chr4 (398-488)||(8438305-8438394)
chr4 (405-499)||(23613599-23613693)
chr4 (398-487)||(30641545-30641632)
chr4 (400-486)||(32062615-32062701)
chr4 (371-499)||(53129793-53129921)
chr4 (400-493)||(54713649-54713741)
chr4 (401-493)||(11523968-11524060)
chr4 (371-499)||(15507960-15508087)
chr4 (401-493)||(39667091-39667183)
chr4 (401-493)||(45463092-45463184)
chr4 (395-499)||(51692566-51692670)
chr4 (400-483)||(5369183-5369266)
chr4 (398-489)||(11446293-11446384)
chr4 (400-499)||(36008857-36008956)
chr4 (400-499)||(52909569-52909668)
chr4 (375-493)||(4982986-4983104)
chr4 (437-499)||(15507686-15507748)
chr4 (371-493)||(16605621-16605743)
chr4 (375-493)||(33247533-33247651)
chr4 (398-487)||(147344-147433)
chr4 (400-493)||(10408203-10408296)
chr4 (442-491)||(16006151-16006200)
chr4 (371-499)||(37976166-37976294)
chr4 (400-493)||(50504139-50504232)
chr4 (400-493)||(54858874-54858967)
chr4 (398-486)||(8439538-8439626)
chr4 (371-499)||(24411371-24411499)
chr4 (398-494)||(40388420-40388516)
chr4 (428-499)||(24411692-24411763)
chr4 (410-493)||(29321231-29321314)
chr4 (398-489)||(30642460-30642551)
chr4 (372-499)||(35508528-35508655)
chr4 (371-426)||(52298112-52298167)
chr4 (405-499)||(11108161-11108255)
chr4 (401-499)||(17355938-17356036)
chr4 (375-493)||(22566818-22566936)
chr4 (405-486)||(10203647-10203728)
chr4 (400-493)||(27068929-27069022)
chr4 (371-488)||(37976440-37976557)
chr4 (400-493)||(54858579-54858672)
chr4 (401-493)||(3032601-3032693)
chr4 (395-499)||(16005851-16005955)
chr4 (401-493)||(27069225-27069317)
chr4 (398-474)||(40316977-40317053)
chr4 (398-474)||(40327051-40327127)
chr4 (401-489)||(50750910-50750998)
chr4 (398-489)||(55866134-55866223)
chr4 (400-499)||(14802051-14802150)
chr4 (375-421)||(9145026-9145072)
chr4 (375-421)||(42738291-42738337)
chr4 (400-493)||(10407908-10408001)
chr4 (375-492)||(34837334-34837451)
chr4 (400-493)||(51859720-51859813)
chr4 (401-493)||(39701224-39701316)
chr4 (383-491)||(54435396-54435504)
chr4 (363-426)||(48528558-48528621)
chr4 (398-489)||(50751812-50751902)
chr4 (404-486)||(5818093-5818175)
chr4 (363-474)||(29320067-29320180)
chr4 (375-421)||(32950233-32950279)
chr4 (438-499)||(1178070-1178130)
chr4 (400-493)||(9400538-9400631)
chr4 (401-486)||(22718254-22718339)
chr4 (401-474)||(22923176-22923249)
chr4 (401-474)||(22927829-22927902)
chr4 (401-474)||(22984108-22984181)
chr4 (401-486)||(22986877-22986962)
chr4 (401-474)||(22997696-22997769)
chr4 (372-429)||(23455649-23455706)
chr4 (400-493)||(27149310-27149402)
chr4 (409-497)||(33247289-33247377)
chr4 (405-493)||(45463392-45463480)
chr4 (400-448)||(51859471-51859519)
chr4 (397-449)||(56014788-56014840)
[»] chr7 (97 HSPs)
chr7 (371-499)||(40379782-40379910)
chr7 (363-499)||(5457186-5457322)
chr7 (371-499)||(28469295-28469423)
chr7 (370-499)||(24388832-24388961)
chr7 (371-499)||(10935807-10935935)
chr7 (373-499)||(45010893-45011019)
chr7 (375-499)||(6253484-6253608)
chr7 (375-499)||(17102033-17102157)
chr7 (375-499)||(19204502-19204626)
chr7 (400-499)||(42362463-42362562)
chr7 (383-499)||(6571026-6571142)
chr7 (375-499)||(32298996-32299120)
chr7 (372-499)||(17886778-17886905)
chr7 (398-489)||(18855968-18856059)
chr7 (371-494)||(42731437-42731560)
chr7 (405-499)||(13386068-13386162)
chr7 (377-499)||(22871570-22871692)
chr7 (398-499)||(18670177-18670278)
chr7 (375-499)||(27991752-27991876)
chr7 (372-499)||(27396883-27397010)
chr7 (400-499)||(27992024-27992123)
chr7 (371-499)||(10936081-10936209)
chr7 (363-499)||(20426609-20426745)
chr7 (400-499)||(2640191-2640290)
chr7 (400-491)||(17885649-17885740)
chr7 (400-499)||(28469023-28469122)
chr7 (404-491)||(48788824-48788911)
chr7 (405-499)||(30128668-30128762)
chr7 (402-499)||(42019610-42019707)
chr7 (383-499)||(2640477-2640593)
chr7 (398-498)||(18086303-18086403)
chr7 (398-498)||(18087652-18087752)
chr7 (383-499)||(23181293-23181409)
chr7 (371-487)||(32053430-32053546)
chr7 (383-499)||(37656865-37656981)
chr7 (400-499)||(17102305-17102404)
chr7 (400-499)||(24389101-24389200)
chr7 (402-493)||(32687416-32687507)
chr7 (400-491)||(33808344-33808435)
chr7 (400-499)||(40380000-40380099)
chr7 (375-493)||(32680855-32680973)
chr7 (398-494)||(13384520-13384616)
chr7 (398-485)||(5455854-5455941)
chr7 (400-499)||(6253756-6253855)
chr7 (406-493)||(16803967-16804054)
chr7 (398-489)||(43123198-43123289)
chr7 (437-499)||(32298790-32298852)
chr7 (398-492)||(32688532-32688626)
chr7 (400-493)||(25453147-25453240)
chr7 (438-499)||(37657191-37657252)
chr7 (398-491)||(42363700-42363792)
chr7 (401-493)||(33828289-33828381)
chr7 (371-499)||(42019884-42020012)
chr7 (372-480)||(43124440-43124548)
chr7 (374-489)||(7354885-7355000)
chr7 (404-499)||(27396642-27396737)
chr7 (404-499)||(32053156-32053251)
chr7 (400-499)||(42731735-42731834)
chr7 (404-494)||(22828138-22828228)
chr7 (400-494)||(32934366-32934460)
chr7 (404-489)||(3914458-3914542)
chr7 (400-493)||(42617930-42618023)
chr7 (400-493)||(42618225-42618318)
chr7 (363-436)||(45915759-45915832)
chr7 (401-493)||(22081874-22081966)
chr7 (400-491)||(25628499-25628590)
chr7 (404-489)||(29144302-29144387)
chr7 (375-421)||(30948420-30948466)
chr7 (401-499)||(47945370-47945468)
chr7 (401-499)||(47950800-47950898)
chr7 (372-429)||(12644093-12644150)
chr7 (397-494)||(20425496-20425593)
chr7 (400-493)||(22081579-22081671)
chr7 (400-493)||(25628792-25628885)
chr7 (404-493)||(43266285-43266374)
chr7 (372-429)||(45914607-45914664)
chr7 (376-456)||(13311325-13311405)
chr7 (401-493)||(28890598-28890690)
chr7 (401-493)||(32068411-32068503)
chr7 (398-489)||(18855433-18855524)
chr7 (402-493)||(32068115-32068206)
chr7 (371-422)||(45010688-45010739)
chr7 (400-491)||(46205623-46205714)
chr7 (441-499)||(28105514-28105572)
chr7 (375-421)||(34928910-34928956)
chr7 (371-429)||(38643633-38643691)
chr7 (372-493)||(39274889-39275011)
chr7 (375-421)||(39686794-39686840)
chr7 (371-453)||(48789090-48789172)
chr7 (372-429)||(4226208-4226265)
chr7 (383-432)||(38644631-38644680)
chr7 (400-493)||(43266580-43266673)
chr7 (400-493)||(46204440-46204533)
chr7 (402-499)||(47946792-47946889)
chr7 (402-499)||(47952222-47952319)
chr7 (372-436)||(12643176-12643240)
chr7 (401-493)||(23058744-23058836)
[»] chr6 (61 HSPs)
chr6 (365-499)||(26463192-26463326)
chr6 (398-494)||(8090241-8090337)
chr6 (375-499)||(30337462-30337586)
chr6 (400-499)||(681044-681143)
chr6 (398-489)||(8089466-8089557)
chr6 (371-499)||(21628000-21628128)
chr6 (371-499)||(33517547-33517675)
chr6 (400-499)||(679879-679978)
chr6 (400-499)||(15115352-15115451)
chr6 (371-486)||(24210557-24210672)
chr6 (400-499)||(30726075-30726174)
chr6 (400-499)||(33517850-33517949)
chr6 (371-499)||(12080649-12080777)
chr6 (404-499)||(3059576-3059671)
chr6 (400-499)||(33647267-33647366)
chr6 (377-499)||(30803874-30803996)
chr6 (398-499)||(12407521-12407622)
chr6 (398-499)||(13379796-13379897)
chr6 (371-491)||(30725781-30725900)
chr6 (400-499)||(30337734-30337833)
chr6 (405-499)||(12408492-12408586)
chr6 (397-493)||(15116545-15116641)
chr6 (400-499)||(22617896-22617996)
chr6 (400-499)||(11434815-11434914)
chr6 (400-499)||(12080952-12081051)
chr6 (400-499)||(30804177-30804276)
chr6 (375-493)||(14196875-14196993)
chr6 (371-499)||(3059270-3059398)
chr6 (401-493)||(7905262-7905354)
chr6 (375-499)||(17734454-17734578)
chr6 (371-499)||(33646976-33647104)
chr6 (400-499)||(17734209-17734308)
chr6 (400-499)||(20651023-20651122)
chr6 (404-493)||(141060-141149)
chr6 (404-493)||(149081-149170)
chr6 (400-493)||(7160823-7160916)
chr6 (398-499)||(20651961-20652062)
chr6 (375-492)||(28000645-28000762)
chr6 (363-499)||(13378538-13378674)
chr6 (400-499)||(21627726-21627825)
chr6 (401-499)||(11393121-11393219)
chr6 (363-489)||(28498304-28498430)
chr6 (400-493)||(31406897-31406990)
chr6 (400-493)||(31407192-31407285)
chr6 (371-426)||(1215153-1215208)
chr6 (400-491)||(21836053-21836143)
chr6 (408-499)||(26464523-26464614)
chr6 (400-493)||(6517522-6517614)
chr6 (400-493)||(15913862-15913955)
chr6 (400-493)||(22502793-22502886)
chr6 (401-493)||(7161119-7161211)
chr6 (375-421)||(363090-363136)
chr6 (400-494)||(21836344-21836438)
chr6 (371-484)||(11392866-11392979)
chr6 (372-421)||(11435957-11436006)
chr6 (401-498)||(32593504-32593601)
chr6 (404-432)||(139873-139901)
chr6 (404-432)||(147894-147922)
chr6 (401-493)||(7905558-7905650)
chr6 (401-493)||(22503089-22503181)
chr6 (397-493)||(25486208-25486304)
[»] chr8 (90 HSPs)
chr8 (375-499)||(23663805-23663929)
chr8 (371-499)||(31608800-31608928)
chr8 (371-499)||(4405947-4406075)
chr8 (371-499)||(39071689-39071817)
chr8 (400-499)||(38862879-38862978)
chr8 (375-499)||(8316879-8317003)
chr8 (383-499)||(23698543-23698659)
chr8 (398-489)||(2535864-2535955)
chr8 (400-499)||(8316666-8316765)
chr8 (400-499)||(23663558-23663657)
chr8 (400-497)||(35756898-35756996)
chr8 (371-493)||(36928495-36928617)
chr8 (378-499)||(12273147-12273268)
chr8 (398-499)||(20385581-20385682)
chr8 (398-499)||(20386744-20386845)
chr8 (371-499)||(16388813-16388941)
chr8 (400-499)||(12272931-12273030)
chr8 (375-493)||(36325253-36325371)
chr8 (401-499)||(40317977-40318075)
chr8 (371-499)||(1425066-1425194)
chr8 (371-499)||(13186073-13186201)
chr8 (400-499)||(12198963-12199062)
chr8 (400-499)||(12443391-12443490)
chr8 (400-499)||(38955988-38956087)
chr8 (375-493)||(11674714-11674831)
chr8 (401-499)||(13186376-13186474)
chr8 (375-499)||(1425313-1425436)
chr8 (375-499)||(22915649-22915773)
chr8 (371-499)||(40318251-40318379)
chr8 (384-499)||(4994957-4995071)
chr8 (400-499)||(39071958-39072056)
chr8 (293-363)||(29566414-29566484)
chr8 (400-494)||(34061644-34061738)
chr8 (401-499)||(34685575-34685672)
chr8 (398-499)||(30712031-30712131)
chr8 (398-499)||(30719808-30719908)
chr8 (398-499)||(34177284-34177385)
chr8 (401-489)||(8746347-8746435)
chr8 (404-491)||(7294122-7294209)
chr8 (371-489)||(35756606-35756723)
chr8 (400-493)||(7983447-7983540)
chr8 (400-493)||(15229950-15230043)
chr8 (401-493)||(6471709-6471801)
chr8 (401-493)||(10445650-10445742)
chr8 (401-493)||(44664527-44664619)
chr8 (398-489)||(2534718-2534809)
chr8 (329-494)||(11761858-11762024)
chr8 (400-499)||(36928792-36928891)
chr8 (376-499)||(38955716-38955839)
chr8 (402-493)||(44664824-44664915)
chr8 (401-499)||(4994670-4994768)
chr8 (437-499)||(33357511-33357573)
chr8 (400-493)||(234054-234147)
chr8 (400-493)||(710465-710558)
chr8 (400-493)||(747677-747770)
chr8 (400-493)||(871572-871665)
chr8 (404-493)||(25124881-25124970)
chr8 (400-493)||(36325519-36325612)
chr8 (409-493)||(10749833-10749917)
chr8 (400-499)||(23698321-23698421)
chr8 (376-499)||(36186359-36186479)
chr8 (402-490)||(37542246-37542334)
chr8 (404-499)||(7295247-7295342)
chr8 (400-491)||(25124584-25124675)
chr8 (375-421)||(3041716-3041762)
chr8 (445-499)||(16388596-16388650)
chr8 (433-499)||(30459384-30459450)
chr8 (375-421)||(38845559-38845605)
chr8 (376-422)||(38862708-38862754)
chr8 (375-421)||(40775910-40775956)
chr8 (375-421)||(44407117-44407163)
chr8 (375-492)||(2266512-2266629)
chr8 (400-493)||(15230245-15230338)
chr8 (400-493)||(23507741-23507834)
chr8 (404-499)||(34176458-34176549)
chr8 (400-493)||(35634413-35634506)
chr8 (443-499)||(9065678-9065734)
chr8 (395-483)||(20050112-20050200)
chr8 (401-493)||(41353593-41353685)
chr8 (398-453)||(8747578-8747633)
chr8 (383-498)||(31873198-31873313)
chr8 (401-491)||(22915410-22915500)
chr8 (397-499)||(34060502-34060604)
chr8 (437-499)||(36186114-36186176)
chr8 (397-490)||(9337048-9337141)
chr8 (400-493)||(11674979-11675072)
chr8 (376-421)||(12199211-12199256)
chr8 (376-421)||(12443639-12443684)
chr8 (397-486)||(43181465-43181554)
chr8 (377-421)||(35449871-35449915)
[»] chr3 (92 HSPs)
chr3 (371-499)||(23458266-23458394)
chr3 (375-499)||(2796192-2796316)
chr3 (383-499)||(9294257-9294373)
chr3 (375-499)||(19741183-19741307)
chr3 (371-499)||(33689666-33689794)
chr3 (371-499)||(9367754-9367882)
chr3 (400-499)||(23457992-23458091)
chr3 (397-494)||(25107231-25107328)
chr3 (383-499)||(40033755-40033871)
chr3 (371-499)||(51994173-51994301)
chr3 (399-494)||(1079536-1079631)
chr3 (398-489)||(43608796-43608887)
chr3 (375-493)||(36314558-36314676)
chr3 (400-494)||(36417706-36417800)
chr3 (377-499)||(46474828-46474950)
chr3 (375-493)||(48322637-48322755)
chr3 (372-493)||(9368589-9368710)
chr3 (398-489)||(1078560-1078650)
chr3 (398-489)||(6956271-6956362)
chr3 (398-489)||(21186009-21186100)
chr3 (397-488)||(21783808-21783899)
chr3 (400-499)||(36418004-36418103)
chr3 (400-499)||(40758426-40758525)
chr3 (400-499)||(43384599-43384698)
chr3 (400-494)||(3849049-3849143)
chr3 (371-499)||(40758160-40758285)
chr3 (397-489)||(33154900-33154992)
chr3 (400-499)||(26463645-26463744)
chr3 (375-493)||(10770751-10770869)
chr3 (372-486)||(32431480-32431594)
chr3 (371-493)||(33156281-33156403)
chr3 (400-489)||(19740946-19741035)
chr3 (372-499)||(3850415-3850542)
chr3 (400-499)||(33689395-33689493)
chr3 (400-499)||(41558198-41558297)
chr3 (396-499)||(42342804-42342907)
chr3 (400-499)||(46475097-46475195)
chr3 (400-491)||(53757039-53757130)
chr3 (401-491)||(41558029-41558119)
chr3 (397-494)||(23276296-23276393)
chr3 (401-486)||(47857562-47857647)
chr3 (405-489)||(47856410-47856494)
chr3 (400-499)||(42343047-42343146)
chr3 (383-490)||(43384305-43384412)
chr3 (371-436)||(26463885-26463950)
chr3 (400-493)||(29118852-29118945)
chr3 (446-499)||(34142580-34142633)
chr3 (400-493)||(35643870-35643963)
chr3 (395-499)||(40506098-40506203)
chr3 (375-492)||(54466443-54466560)
chr3 (438-499)||(55052305-55052366)
chr3 (401-489)||(4323519-4323607)
chr3 (401-493)||(32306739-32306831)
chr3 (443-499)||(36150540-36150596)
chr3 (404-492)||(42855625-42855713)
chr3 (371-499)||(53756757-53756885)
chr3 (371-426)||(30380932-30380987)
chr3 (375-421)||(8041707-8041753)
chr3 (400-474)||(10307689-10307763)
chr3 (376-498)||(14634044-14634166)
chr3 (398-480)||(41988616-41988698)
chr3 (395-441)||(42854506-42854552)
chr3 (400-493)||(3469514-3469607)
chr3 (400-493)||(10294586-10294679)
chr3 (400-493)||(11910718-11910811)
chr3 (397-450)||(26718760-26718813)
chr3 (372-429)||(29192118-29192175)
chr3 (438-499)||(35712057-35712118)
chr3 (404-493)||(37778591-37778680)
chr3 (400-493)||(40788734-40788827)
chr3 (442-499)||(51993977-51994034)
chr3 (400-493)||(52032157-52032250)
chr3 (363-494)||(25108374-25108505)
chr3 (396-436)||(32716325-32716365)
chr3 (395-499)||(55052559-55052662)
chr3 (398-489)||(4322615-4322705)
chr3 (402-493)||(29685960-29686051)
chr3 (371-426)||(39399379-39399434)
chr3 (371-426)||(41988048-41988103)
chr3 (371-426)||(44654790-44654845)
chr3 (371-426)||(54317918-54317973)
chr3 (400-490)||(3469222-3469312)
chr3 (461-499)||(9292256-9292294)
chr3 (400-493)||(10770509-10770602)
chr3 (400-493)||(13948799-13948892)
chr3 (396-429)||(32717089-32717122)
chr3 (400-493)||(36314317-36314410)
chr3 (438-499)||(40033532-40033593)
chr3 (404-493)||(47551512-47551601)
chr3 (404-493)||(52032457-52032546)
chr3 (401-493)||(40788439-40788531)
chr3 (437-489)||(43607803-43607855)
[»] chr2 (78 HSPs)
chr2 (398-499)||(25231162-25231263)
chr2 (371-499)||(15848101-15848229)
chr2 (400-499)||(3555263-3555362)
chr2 (371-499)||(36382174-36382302)
chr2 (371-499)||(39423528-39423656)
chr2 (375-499)||(39498323-39498447)
chr2 (400-499)||(13692536-13692635)
chr2 (371-494)||(44714048-44714171)
chr2 (377-499)||(11163316-11163438)
chr2 (398-499)||(25230115-25230216)
chr2 (371-499)||(10712736-10712864)
chr2 (404-499)||(3556329-3556424)
chr2 (400-499)||(6588696-6588795)
chr2 (400-499)||(10713039-10713138)
chr2 (400-499)||(34448111-34448210)
chr2 (400-499)||(36755404-36755503)
chr2 (372-499)||(44045290-44045417)
chr2 (401-491)||(9076384-9076474)
chr2 (371-499)||(2318172-2318299)
chr2 (375-499)||(6657891-6658015)
chr2 (375-491)||(16099076-16099192)
chr2 (371-499)||(37895634-37895762)
chr2 (375-493)||(14900743-14900859)
chr2 (400-499)||(15848404-15848503)
chr2 (400-499)||(16099340-16099439)
chr2 (400-499)||(30729634-30729733)
chr2 (400-499)||(36480034-36480133)
chr2 (404-499)||(37895360-37895455)
chr2 (398-499)||(44044127-44044228)
chr2 (402-486)||(28230057-28230141)
chr2 (400-499)||(6658163-6658262)
chr2 (400-499)||(36382443-36382542)
chr2 (371-490)||(36479740-36479859)
chr2 (400-499)||(39423831-39423930)
chr2 (400-499)||(44713808-44713907)
chr2 (396-486)||(3653392-3653481)
chr2 (405-499)||(39498600-39498694)
chr2 (377-499)||(45556125-45556247)
chr2 (405-499)||(45556368-45556462)
chr2 (404-489)||(6589679-6589764)
chr2 (400-489)||(39936563-39936651)
chr2 (398-486)||(202670-202758)
chr2 (395-491)||(22051304-22051400)
chr2 (404-491)||(6307038-6307125)
chr2 (400-493)||(15604358-15604451)
chr2 (374-498)||(6846798-6846922)
chr2 (405-489)||(28228693-28228777)
chr2 (400-499)||(11163067-11163166)
chr2 (371-498)||(11689555-11689682)
chr2 (402-493)||(28226060-28226151)
chr2 (400-493)||(15604653-15604746)
chr2 (398-499)||(21370516-21370617)
chr2 (404-489)||(39935478-39935563)
chr2 (404-493)||(41587254-41587342)
chr2 (371-483)||(11721377-11721489)
chr2 (383-483)||(17266427-17266527)
chr2 (371-499)||(34447826-34447953)
chr2 (406-489)||(3652234-3652317)
chr2 (380-471)||(17266626-17266717)
chr2 (375-421)||(33739794-33739840)
chr2 (400-493)||(8710782-8710875)
chr2 (372-429)||(25623371-25623428)
chr2 (408-489)||(43742000-43742081)
chr2 (371-426)||(10840562-10840617)
chr2 (371-422)||(36755183-36755234)
chr2 (375-498)||(41248819-41248942)
chr2 (397-427)||(11349518-11349548)
chr2 (375-421)||(13995933-13995979)
chr2 (375-421)||(33062310-33062356)
chr2 (462-499)||(2318888-2318925)
chr2 (400-493)||(8342206-8342299)
chr2 (400-493)||(8342493-8342586)
chr2 (373-426)||(11347509-11347562)
chr2 (396-429)||(25624417-25624450)
chr2 (385-474)||(25892432-25892521)
chr2 (374-422)||(6573136-6573184)
chr2 (401-493)||(11830383-11830475)
chr2 (329-420)||(29957909-29958001)
[»] scaffold0005 (2 HSPs)
scaffold0005 (371-499)||(37850-37978)
scaffold0005 (400-499)||(37577-37676)
[»] chr5 (100 HSPs)
chr5 (383-499)||(39453313-39453429)
chr5 (375-499)||(3529133-3529257)
chr5 (371-499)||(5993902-5994030)
chr5 (375-499)||(11761762-11761886)
chr5 (371-499)||(19892595-19892723)
chr5 (371-499)||(20840546-20840674)
chr5 (371-499)||(24547412-24547540)
chr5 (371-499)||(35512161-35512289)
chr5 (400-499)||(19892321-19892420)
chr5 (376-499)||(38475291-38475414)
chr5 (371-499)||(16157142-16157270)
chr5 (375-499)||(27587161-27587285)
chr5 (400-499)||(8322720-8322819)
chr5 (406-499)||(5835748-5835841)
chr5 (371-499)||(13962877-13963005)
chr5 (371-499)||(20814422-20814550)
chr5 (371-499)||(32242255-32242383)
chr5 (400-499)||(11762033-11762132)
chr5 (400-499)||(14194436-14194535)
chr5 (400-491)||(16156876-16156967)
chr5 (377-499)||(28771131-28771253)
chr5 (401-499)||(35512431-35512529)
chr5 (400-494)||(37991217-37991311)
chr5 (371-499)||(5024305-5024433)
chr5 (371-499)||(17202412-17202540)
chr5 (377-499)||(18670215-18670334)
chr5 (400-499)||(3528886-3528985)
chr5 (400-499)||(6150736-6150835)
chr5 (400-499)||(27587431-27587530)
chr5 (400-499)||(28269435-28269534)
chr5 (400-499)||(39453615-39453714)
chr5 (400-499)||(43159130-43159229)
chr5 (400-490)||(6301859-6301949)
chr5 (375-493)||(6758125-6758243)
chr5 (401-499)||(17202716-17202814)
chr5 (375-493)||(41930535-41930653)
chr5 (405-486)||(5835649-5835730)
chr5 (402-499)||(13963147-13963244)
chr5 (383-499)||(18247099-18247213)
chr5 (400-499)||(186735-186834)
chr5 (400-499)||(11740700-11740799)
chr5 (400-499)||(11741833-11741932)
chr5 (376-499)||(16082990-16083113)
chr5 (398-489)||(24141475-24141566)
chr5 (400-499)||(38442383-38442482)
chr5 (377-499)||(6150467-6150589)
chr5 (437-499)||(18247429-18247491)
chr5 (437-499)||(28770882-28770944)
chr5 (400-486)||(35920254-35920340)
chr5 (397-499)||(37992601-37992703)
chr5 (383-488)||(35920483-35920588)
chr5 (406-499)||(42265748-42265841)
chr5 (383-499)||(13362527-13362643)
chr5 (397-493)||(40150127-40150223)
chr5 (400-499)||(5994205-5994304)
chr5 (400-499)||(11047753-11047851)
chr5 (401-499)||(27937068-27937164)
chr5 (400-499)||(32242558-32242656)
chr5 (376-499)||(38442081-38442204)
chr5 (401-499)||(21257478-21257576)
chr5 (371-483)||(12904783-12904895)
chr5 (400-499)||(5024032-5024131)
chr5 (383-494)||(14194722-14194832)
chr5 (400-499)||(20814149-20814247)
chr5 (405-499)||(19517928-19518022)
chr5 (428-494)||(24547195-24547261)
chr5 (405-499)||(29646375-29646469)
chr5 (400-494)||(42067840-42067934)
chr5 (402-499)||(16083261-16083358)
chr5 (400-493)||(17544362-17544455)
chr5 (397-474)||(42063292-42063369)
chr5 (383-491)||(186440-186548)
chr5 (400-488)||(21265167-21265255)
chr5 (383-499)||(29646661-29646776)
chr5 (401-493)||(33871653-33871745)
chr5 (397-489)||(40148921-40149013)
chr5 (402-493)||(8875468-8875559)
chr5 (401-488)||(38475057-38475144)
chr5 (375-421)||(297274-297320)
chr5 (398-480)||(15645026-15645108)
chr5 (405-498)||(5326071-5326164)
chr5 (400-489)||(20152804-20152893)
chr5 (377-422)||(28269681-28269726)
chr5 (400-493)||(33871358-33871451)
chr5 (407-499)||(20840760-20840852)
chr5 (364-499)||(30096822-30096957)
chr5 (377-421)||(31482664-31482708)
chr5 (400-479)||(6301576-6301655)
chr5 (383-422)||(8322494-8322533)
chr5 (371-422)||(11047527-11047578)
chr5 (383-498)||(14848753-14848868)
chr5 (371-426)||(14848994-14849049)
chr5 (434-477)||(18670500-18670543)
chr5 (375-421)||(1506058-1506104)
chr5 (331-429)||(20857015-20857115)
chr5 (372-429)||(22869688-22869745)
chr5 (372-429)||(22870422-22870479)
chr5 (400-493)||(41930801-41930894)
chr5 (371-450)||(13362289-13362368)
chr5 (329-429)||(20857462-20857564)
[»] scaffold0031 (2 HSPs)
scaffold0031 (371-499)||(68978-69106)
scaffold0031 (400-499)||(69281-69380)
[»] scaffold0020 (2 HSPs)
scaffold0020 (375-499)||(139685-139809)
scaffold0020 (400-499)||(139957-140056)
[»] scaffold0007 (2 HSPs)
scaffold0007 (375-499)||(1782-1906)
scaffold0007 (402-499)||(2059-2156)
[»] scaffold0707 (1 HSPs)
scaffold0707 (400-499)||(6395-6494)
[»] scaffold0008 (1 HSPs)
scaffold0008 (398-493)||(239865-239960)
[»] scaffold0075 (2 HSPs)
scaffold0075 (431-499)||(14737-14805)
scaffold0075 (405-499)||(14442-14536)
[»] scaffold0775 (2 HSPs)
scaffold0775 (400-487)||(4987-5074)
scaffold0775 (402-493)||(6296-6387)
[»] scaffold0128 (1 HSPs)
scaffold0128 (402-493)||(19876-19967)
[»] scaffold0388 (1 HSPs)
scaffold0388 (402-493)||(12555-12646)
[»] scaffold0328 (1 HSPs)
scaffold0328 (401-494)||(11455-11548)
[»] scaffold0205 (2 HSPs)
scaffold0205 (375-493)||(21229-21347)
scaffold0205 (405-493)||(21028-21116)
[»] scaffold0347 (2 HSPs)
scaffold0347 (363-427)||(14544-14608)
scaffold0347 (371-427)||(13694-13750)
[»] scaffold0006 (2 HSPs)
scaffold0006 (400-491)||(221812-221902)
scaffold0006 (400-493)||(222103-222196)
[»] scaffold0559 (1 HSPs)
scaffold0559 (375-421)||(1324-1370)
[»] scaffold0024 (1 HSPs)
scaffold0024 (375-421)||(141854-141900)
[»] scaffold0599 (1 HSPs)
scaffold0599 (400-493)||(2412-2505)
[»] scaffold0295 (1 HSPs)
scaffold0295 (372-423)||(2232-2283)
[»] scaffold0027 (1 HSPs)
scaffold0027 (371-426)||(14078-14132)
[»] scaffold0220 (1 HSPs)
scaffold0220 (372-474)||(23269-23371)
[»] scaffold0771 (1 HSPs)
scaffold0771 (400-493)||(939-1032)


Alignment Details
Target: chr1 (Bit Score: 245; Significance: 1e-135; HSPs: 115)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 192 - 499
Target Start/End: Complemental strand, 34849329 - 34849024
Alignment:
Q  192 ttgagtgtgtgtggttatatggcggcggtgatgattggtagatgaactgaatttcacattggagatgaatgaagatgaattgttggattgaagaaagagt 291  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  34849329 ttgagtgtgtgtggttatatggcggcggtgatgattggtagatgaactgaatttcatattggagatgaatgaagatgaattattggattgaagaaagagt 34849230  T
Q  292 tgggggcattttggtcattttgcttttggctgaagtcttaggggtatttttgtcagttcacatcatcttttgctaatcggtgacgtggcaatgattaaga 391  Q
    | |||||||||||||||||| ||||||||||||||||| |||  |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  34849229 taggggcattttggtcatttcgcttttggctgaagtctcagg--tatttttgtcagttcacagcatcttttgctaatcggtgacgtggcagtgattaaga 34849132  T
Q  392 ggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaag 491  Q
    || |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| || |||||||||||||| ||||||||||||||||    
T  34849131 ggggagagggacgaaattttaaatgattaaattttgcaagggtaatttgcaaggattagcgaatacagggaccaatttttaaaagacccctaattgcaag 34849032  T
Q  492 gattaaat 499  Q
    ||||||||    
T  34849031 gattaaat 34849024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 363 - 499
Target Start/End: Original strand, 34850344 - 34850480
Alignment:
Q  363 gctaatcggtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagaga 462  Q
    ||||||| ||||||||||| |||||||| || |||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||| || ||    
T  34850344 gctaatcagtgacgtggcagtgattaagtggggagagggatgaaattttaaatgattaaattttgcaagggtaatttgcaaggattagcgaatacaggga 34850443  T
Q  463 ccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||||||||||||||||||||    
T  34850444 ccaatttttaaacgacccctaattgcaaggattaaat 34850480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 15 - 122
Target Start/End: Complemental strand, 34849506 - 34849399
Alignment:
Q  15 caataacaaagaggaggaaagtgatcgagcatgtggaaggaaagaaaacaatgagaatttcatgtattacatagtgacatgagaaatgtagcaatggtgt 114  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34849506 caataacaaagaggaggaaagagatcgagcatgtggaaggagagaaaacaatgagaatttcatgtattacatagtgacatgagaaatgtagcaatggtgt 34849407  T
Q  115 ttatatat 122  Q
    ||||||||    
T  34849406 ttatatat 34849399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 371 - 499
Target Start/End: Complemental strand, 6367703 - 6367575
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||||||||| |||||||| || ||||||||||||||||||||||||||||   | ||||||||| |||| ||||||| ||| || || ||||||||||    
T  6367703 gtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagggaccaatttt 6367604  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||||||| ||||    
T  6367603 taaacgacccctaattgcaaggatgaaat 6367575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 375 - 499
Target Start/End: Complemental strand, 25648021 - 25647897
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || |||||||||||||||||||||||||||||  | || |||||| |||| ||||||||||| || || ||||||||||||||    
T  25648021 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaataatgcaggggtaaattgccaggattaacgattacagggaccaatttttaaa 25647922  T
Q  475 cgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||| ||||    
T  25647921 cgacccctaattgcaaggatcaaat 25647897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 371 - 499
Target Start/End: Complemental strand, 4960681 - 4960553
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||||||||| |||||||| ||  |||||||||||||||||||||||||||   | ||||||||| |||||||||||| |||||| | ||| |||||||    
T  4960681 gtgacgtggcagtgattaagtgggaagagggacgaaattttaaatgattaaacaatgcaagggtaaattgcaaggattagcgaatacaaagagcaatttt 4960582  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||| ||| ||||    
T  4960581 taaacgacccctaattgcaatgatgaaat 4960553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 371 - 499
Target Start/End: Original strand, 17662137 - 17662265
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||||||||| |||||||| ||  |||||||||||||||||||||||||||   | ||||||||| |||| ||||||||||| || ||  |||||||||    
T  17662137 gtgacgtggcagtgattaagtgggaagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattaacgattaaaggaaccaatttt 17662236  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||| |||||||||||| ||||    
T  17662237 taaacgaccccaaattgcaaggatgaaat 17662265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 375 - 491
Target Start/End: Complemental strand, 26024560 - 26024444
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || |||||||||||| |||||||||||||||   | ||||||||| |||| ||||||| ||| || |||||||||||||||||    
T  26024560 cgtggcagtgattaagtggggagagggacgaacttttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagagaccaatttttaaa 26024461  T
Q  475 cgacccctaattgcaag 491  Q
    |||||||||||||||||    
T  26024460 cgacccctaattgcaag 26024444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 401 - 499
Target Start/End: Original strand, 30711644 - 30711742
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||||   || ||||| || ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  30711644 gacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagagaccaatttttaaacgacccctaattgcaaggatgaaat 30711742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 374 - 499
Target Start/End: Complemental strand, 42248611 - 42248486
Alignment:
Q  374 acgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaa 473  Q
    |||||||| |||||||| || ||||||||||||||||||||||||||||   | ||||||||| |||| | ||||| ||| || | ||||||||||||||    
T  42248611 acgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccacgattagcgactacaaagaccaatttttaa 42248512  T
Q  474 acgacccctaattgcaaggattaaat 499  Q
    |||||| |||||||||||||| ||||    
T  42248511 acgaccactaattgcaaggatgaaat 42248486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 371 - 499
Target Start/End: Original strand, 13914354 - 13914482
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||||||||| ||||| || || ||||||||||||||||||||||||||||   ||||||||||| |||| ||||||| ||| || |  ||||||||||    
T  13914354 gtgacgtggcagtgatttagtggggagagggacgaaattttaaatgattaaacaatacaagggtaaattgccaggattagcgattacatggaccaatttt 13914453  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    ||||| ||| |||||||||||||| ||||    
T  13914454 taaacaacctctaattgcaaggatgaaat 13914482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 371 - 499
Target Start/End: Original strand, 40210657 - 40210785
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||||||||| |||||||| || ||||||||||||||||||||||||||||   | ||||||||| |||| || |||| ||| || | |||||||||||    
T  40210657 gtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccagaattagcgattacaaagaccaatttt 40210756  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    |||||| ||||||||||||| ||| ||||    
T  40210757 taaacggcccctaattgcaatgatgaaat 40210785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 371 - 490
Target Start/End: Complemental strand, 48691289 - 48691170
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||||||||| |||||||| || ||||| ||| |||||||||||||| ||   || ||||| || |||||||| ||||||||||| || ||||||||||    
T  48691289 gtgacgtggcagtgattaagtggggagagtgacaaaattttaaatgatcaatgattgcaaggttagtttgcaagaattaacgaatacagcgaccaatttt 48691190  T
Q  471 taaacgacccctaattgcaa 490  Q
    ||||||||||||||||||||    
T  48691189 taaacgacccctaattgcaa 48691170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 377 - 499
Target Start/End: Complemental strand, 19515954 - 19515832
Alignment:
Q  377 tggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacg 476  Q
    ||||| |||||||| || ||||||||||||||||||||| ||||||   | ||||||||| || | || |||||||| || | |||||||||||||||||    
T  19515954 tggcagtgattaagtggggagagggacgaaattttaaataattaaacaatgcaagggtaaatttccagaattaacgattacaaagaccaatttttaaacg 19515855  T
Q  477 acccctaattgcaaggattaaat 499  Q
    |||||||||||||||||| ||||    
T  19515854 acccctaattgcaaggatgaaat 19515832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 401 - 499
Target Start/End: Complemental strand, 40435456 - 40435358
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||| |||||||||||||||||||||||| | | ||  |||||||||||||||||| |  |||||||||||||||||||||||||||||||||| ||||    
T  40435456 gacggaattttaaatgattaaattttacaggtgcaaaatgcaaggattaacgaatacaatgaccaatttttaaacgacccctaattgcaaggatgaaat 40435358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 375 - 499
Target Start/End: Original strand, 183482 - 183607
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || |||||||||||||||||||||||||||||  | || |||||| |||| ||||||| ||| || || ||||||||||||||    
T  183482 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaataatgcaggggtaaattgctaggattagcgattacagggaccaatttttaaa 183581  T
Q  475 cga-cccctaattgcaaggattaaat 499  Q
    ||| ||||||||| ||||||| ||||    
T  183582 cgaccccctaattacaaggatcaaat 183607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 371 - 491
Target Start/End: Original strand, 32917547 - 32917667
Alignment:
Q  371 gtgacgtggcaatgattaaga-ggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaattt 469  Q
    ||||||||||||||||||||  ||| | ||| | ||||||||||||||||||   || ||||| || |||||||||||||||||||| ||||||||||||    
T  32917547 gtgacgtggcaatgattaagttggtcaaagg-atgaaattttaaatgattaatgattgcaaggctagtttgcaaggattaacgaatacagagaccaattt 32917645  T
Q  470 ttaaacgacccctaattgcaag 491  Q
    ||||||||||| ||||||||||    
T  32917646 ttaaacgacccttaattgcaag 32917667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 371 - 499
Target Start/End: Original strand, 24009828 - 24009956
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    |||| |||||| |||||||| || ||||||||||||||||||||||||||||   | ||||||||| |||| ||||||  ||| || |  ||||||||||    
T  24009828 gtgatgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattggcgattacaatgaccaatttt 24009927  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    ||||||| |||||||||||||||| ||||    
T  24009928 taaacgatccctaattgcaaggatgaaat 24009956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 371 - 499
Target Start/End: Complemental strand, 30711468 - 30711340
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||| ||||| |||||||| || | ||||||||||||||||||||||||||   | ||||| ||| |||| ||||||| ||| || ||||| |||||||    
T  30711468 gtgacatggcagtgattaagtggggcgagggacgaaattttaaatgattaaacaatgcaaggataaattgctaggattagcgattatagagatcaatttt 30711369  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    ||||| |||||||||||||||||| ||||    
T  30711368 taaacaacccctaattgcaaggatgaaat 30711340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 371 - 499
Target Start/End: Original strand, 34464736 - 34464864
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||| ||||| |||||||| || ||||||||| ||||||||||||||||||  || ||||||||| |||| | ||||| ||| || |  ||||||||||    
T  34464736 gtgacatggcagtgattaagtggggagagggacaaaattttaaatgattaaacattgcaagggtaaattgccaagattagcgattacatggaccaatttt 34464835  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    ||||| |||||||||||||||||| ||||    
T  34464836 taaacaacccctaattgcaaggatgaaat 34464864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 375 - 499
Target Start/End: Original strand, 47999383 - 47999507
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || ||||||||||| |||||||||||||||||  | || |||||| |||| | ||||| ||| || || ||||||||||||||    
T  47999383 cgtggcagtgattaagtggggagagggacgatattttaaatgattaaataatgcaggggtaaattgccaagattagcgattacagggaccaatttttaaa 47999482  T
Q  475 cgacccctaattgcaaggattaaat 499  Q
    |||||||||||| ||||||| ||||    
T  47999483 cgacccctaattacaaggatcaaat 47999507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 6367878 - 6367977
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||| || ||||||||||||| |||||| || |||||||||||||||||||| ||||||||||||| ||||    
T  6367878 ggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagggaccaatttttaaacgacccttaattgcaaggatgaaat 6367977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 43759138 - 43759237
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||| ||  || ||||| || ||||||||||||| |||||| || |||| ||||||||||||||||||||||||||||| ||||    
T  43759138 ggacgaaattttaaatgattgaagattgcaaggctagtttgcaaggattagcgaatacagggaccgatttttaaacgacccctaattgcaaggatgaaat 43759237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 377 - 499
Target Start/End: Original strand, 23209620 - 23209742
Alignment:
Q  377 tggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacg 476  Q
    ||||| |||||||| || ||||||||||||||| ||||||||| ||   | ||||||||| |||| ||||||| ||| || |  ||||||||||||||||    
T  23209620 tggcagtgattaagtggggagagggacgaaattgtaaatgattgaacaatgcaagggtaaattgccaggattagcgattacaaggaccaatttttaaacg 23209719  T
Q  477 acccctaattgcaaggattaaat 499  Q
    |||||||||||||||||| ||||    
T  23209720 acccctaattgcaaggatgaaat 23209742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 377 - 499
Target Start/End: Original strand, 36694541 - 36694663
Alignment:
Q  377 tggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacg 476  Q
    ||||| |||||||| || ||||| ||||||||||||||||||||||   | ||||||||| |||  ||||||| ||| || ||||||||||||||||||     
T  36694541 tggcagtgattaagtggggagagagacgaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacagagaccaatttttaaaca 36694640  T
Q  477 acccctaattgcaaggattaaat 499  Q
    || ||||||||||||||| ||||    
T  36694641 acacctaattgcaaggatgaaat 36694663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 377 - 499
Target Start/End: Original strand, 36710642 - 36710764
Alignment:
Q  377 tggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacg 476  Q
    ||||| |||||||| || ||||| ||||||||||||||||||||||   | ||||||||| |||  ||||||| ||| || ||||||||||||||||||     
T  36710642 tggcagtgattaagtggggagagagacgaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacagagaccaatttttaaaca 36710741  T
Q  477 acccctaattgcaaggattaaat 499  Q
    || ||||||||||||||| ||||    
T  36710742 acacctaattgcaaggatgaaat 36710764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 376 - 489
Target Start/End: Complemental strand, 10304059 - 10303946
Alignment:
Q  376 gtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaac 475  Q
    |||||| |||||||| || ||||||||||||||||||||||||||||||||  ||||| || |||| |||||||||||||| | ||| || ||||||||     
T  10304059 gtggcagtgattaagtggggagagggacgaaattttaaatgattaaattttggaagggcaaattgccaggattaacgaatacatagatcattttttaaat 10303960  T
Q  476 gacccctaattgca 489  Q
    ||| |||| |||||    
T  10303959 gactcctatttgca 10303946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 378 - 499
Target Start/End: Original strand, 19017923 - 19018044
Alignment:
Q  378 ggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacga 477  Q
    |||| |||||||| ||  |||||||| |||||||||||||||||||  | ||||||||| |||| ||||||| |||||| |  |||||||||||||||||    
T  19017923 ggcagtgattaagtgggaagagggacaaaattttaaatgattaaataatgcaagggtaaattgccaggattagcgaatacatggaccaatttttaaacga 19018022  T
Q  478 cccctaattgcaaggattaaat 499  Q
    ||  ||||||||||||| ||||    
T  19018023 cctgtaattgcaaggataaaat 19018044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 402 - 499
Target Start/End: Complemental strand, 37578302 - 37578205
Alignment:
Q  402 acgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||   ||  |||| || ||||||||||||| |||||| || |||||||||||||||||||||||||||||||||| ||||    
T  37578302 acgaaattttaaatgattaatgattggaaggctagtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattgcaaggatgaaat 37578205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 383 - 499
Target Start/End: Complemental strand, 14879100 - 14878984
Alignment:
Q  383 tgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccct 482  Q
    |||||||| || ||||||||||||||||||||||||||||   | ||||||||| |||| | ||||| ||| || |   |||||||||||||||||||||    
T  14879100 tgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccaagattagcgattacatgaaccaatttttaaacgacccct 14879001  T
Q  483 aattgcaaggattaaat 499  Q
    |||||||||||| ||||    
T  14879000 aattgcaaggataaaat 14878984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 403 - 499
Target Start/End: Complemental strand, 36694391 - 36694295
Alignment:
Q  403 cgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||   || ||||  || ||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||| ||||    
T  36694391 cgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgaatacatagaccaatttttaaacgacccctaattgcaaggatgaaat 36694295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 403 - 499
Target Start/End: Complemental strand, 36710492 - 36710396
Alignment:
Q  403 cgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||   || ||||  || ||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||| ||||    
T  36710492 cgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgaatacatagaccaatttttaaacgacccctaattgcaaggatgaaat 36710396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 371 - 499
Target Start/End: Original strand, 37578479 - 37578607
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||||||||| |||||||| || ||||| |||||||||||||||||||||    |  |||||||| |||| ||||||| ||| || | | |||||||||    
T  37578479 gtgacgtggcagtgattaagtggggagagtgacgaaattttaaatgattaatcaatgtaagggtaaattgccaggattagcgattacaaaaaccaatttt 37578578  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||| |||||||||||| ||||    
T  37578579 taaacgacccccaattgcaaggatgaaat 37578607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 383 - 499
Target Start/End: Complemental strand, 40772636 - 40772520
Alignment:
Q  383 tgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccct 482  Q
    |||||||| || ||||||||||||||||||||||||||||   | |||| |||| |||  ||||||| ||| || || |||||||||||||||||||| |    
T  40772636 tgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagagtaaattgtcaggattagcgattacagggaccaatttttaaacgacccat 40772537  T
Q  483 aattgcaaggattaaat 499  Q
    |||||||||||| ||||    
T  40772536 aattgcaaggatgaaat 40772520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 383 - 491
Target Start/End: Complemental strand, 41098862 - 41098754
Alignment:
Q  383 tgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccct 482  Q
    |||||||| || ||| ||||| ||||||||||||||||||   | ||||||||| |||  ||||||| ||| || |||||||||||||||||||||||||    
T  41098862 tgattaagtggggagggggacaaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacagagaccaatttttaaacgacccct 41098763  T
Q  483 aattgcaag 491  Q
    |||||||||    
T  41098762 aattgcaag 41098754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 400 - 499
Target Start/End: Complemental strand, 183333 - 183234
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||| |||||||||||||||||   || ||||| || ||||||||||||| |||||| || ||||||||||||||||||||||||||| |||||| ||||    
T  183333 ggactaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattgtaaggatcaaat 183234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 400 - 499
Target Start/End: Complemental strand, 13914180 - 13914081
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||  |||||||||||||||| |||||| |  ||| |||||||||||||||||||||||||||||| ||||    
T  13914180 ggacgaaattttaaatgattaatgattgcaagactaatttgcaaggattagcgaatacatggactaatttttaaacgacccctaattgcaaggatgaaat 13914081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 400 - 499
Target Start/End: Complemental strand, 17661963 - 17661865
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||| | || ||||||||||||| |||||| || |||||||||||||||||||||||||||||||||| ||||    
T  17661963 ggacgaaattttaaatgattaatgattgcaatgctagtttgcaaggattagcgaatacag-gaccaatttttaaacgacccctaattgcaaggatgaaat 17661865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 26024708 - 26024807
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||  || ||||||||||||| ||| || || |||||||||||||||||||||||||||||||||| ||||    
T  26024708 ggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgattacagggaccaatttttaaacgacccctaattgcaaggatcaaat 26024807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 400 - 499
Target Start/End: Complemental strand, 35473743 - 35473644
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||| |||||||||||| ||||   |||||||| || ||||| ||||||| ||| || || |||||||||||||||||||||||||||||||||||||||    
T  35473743 ggacaaaattttaaatgtttaatgattacaaggctagtttgccaggattagcgattacagggaccaatttttaaacgacccctaattgcaaggattaaat 35473644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 400 - 499
Target Start/End: Complemental strand, 47999235 - 47999136
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||| |||||||||||||||||   || ||||| || ||||||||||||| |||||| || ||||||||||||||||| |||||||||||||||| ||||    
T  47999235 ggactaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagggaccaatttttaaacgatccctaattgcaaggatcaaat 47999136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 401 - 499
Target Start/End: Complemental strand, 34464560 - 34464462
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||  || ||||||||| |||| | ||||| ||| || |  |||||||||||||||||||||||||||||||||| ||||    
T  34464560 gacgaaattttaaatgattaaacattgcaagggtaaattgccaagattagcgattacatggaccaatttttaaacgacccctaattgcaaggatgaaat 34464462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 401 - 499
Target Start/End: Original strand, 41099050 - 41099148
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||||   ||  |||| || ||||||||||||| |||||| |||||||||||||||||||||| ||||||| |||||| ||||    
T  41099050 gacgaaattttaaatgattaatgattgtaaggttagtttgcaaggattagcgaatacagagaccaatttttaaacgaccactaattgtaaggatgaaat 41099148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 397 - 493
Target Start/End: Complemental strand, 17691334 - 17691238
Alignment:
Q  397 gagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    ||||||||||||||||||||||||||   | ||||  |||||||||||||||| ||| || || ||||||||||||||||||||||| ||| |||||    
T  17691334 gagggacgaaattttaaatgattaaacaatgcaagactaatttgcaaggattagcgattacagggaccaatttttaaacgacccctacttgtaagga 17691238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 399 - 499
Target Start/End: Original strand, 17692500 - 17692600
Alignment:
Q  399 gggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaa 498  Q
    ||||||||||||||||||||||||   | ||| | |||||||||||||||| |||  | || |||| ||||||||||||||||||||||||||||| |||    
T  17692500 gggacgaaattttaaatgattaaacaatgcaaagctaatttgcaaggattagcgataacagggaccgatttttaaacgacccctaattgcaaggatgaaa 17692599  T
Q  499 t 499  Q
    |    
T  17692600 t 17692600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 383 - 499
Target Start/End: Complemental strand, 1103590 - 1103472
Alignment:
Q  383 tgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagacca--atttttaaacgaccc 480  Q
    |||||||| || ||||||||||||||||||||||||||||   | ||||||||| |||| ||||||| ||| || || |||||  ||||||||||||||     
T  1103590 tgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagggaccaatatttttaaacgacct 1103491  T
Q  481 ctaattgcaaggattaaat 499  Q
    |||||||||| ||| ||||    
T  1103490 ctaattgcaaagatgaaat 1103472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 1103777 - 1103876
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||  || ||||||||||||| |||||| || |||||||||||||||||||  ||||||||||||| ||||    
T  1103777 ggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgaatacagggaccaatttttaaacgacctttaattgcaaggatgaaat 1103876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 371 - 498
Target Start/End: Complemental strand, 9443713 - 9443586
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||| || ||||||||||| || | ||||||| ||||||||||||||||||||||   |||  ||  ||| |||||||| ||||| |||||||| ||||    
T  9443713 gtgacttgacaatgattaagtggggggagggaccaaattttaaatgattaaattttgggaggacaaaatgccaggattaaggaatacagagaccattttt 9443614  T
Q  471 taaacgacccctaattgcaaggattaaa 498  Q
    |||| |||||||| ||||||||| ||||    
T  9443613 taaatgacccctatttgcaaggactaaa 9443586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 400 - 499
Target Start/End: Complemental strand, 40210482 - 40210383
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||  || ||||||||||||| |||||| | ||||||| |||||||||||| |||||||||||||| ||||    
T  40210482 ggacgaaattttaaatgattaatgattgcaagtctagtttgcaaggattagcgaatacaaagaccaaattttaaacgaccactaattgcaaggatgaaat 40210383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 404 - 499
Target Start/End: Original strand, 49723046 - 49723141
Alignment:
Q  404 gaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||   ||  |||| || ||||||||||||| |||||| |  |||||||||||||||||||||||||||||||||| ||||    
T  49723046 gaaattttaaatgattaatgattgaaaggctagtttgcaaggattagcgaatacatggaccaatttttaaacgacccctaattgcaaggatgaaat 49723141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 375 - 485
Target Start/End: Complemental strand, 28011500 - 28011390
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || |||||||||||||||||||||||||||   || ||||| ||| |||| ||||||| | | || || ||| ||||||||||    
T  28011500 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaacaattgcaaggctaaattgccaggattagcaattacagggacgaatttttaaa 28011401  T
Q  475 cgacccctaat 485  Q
    |||||||||||    
T  28011400 cgacccctaat 28011390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 397 - 499
Target Start/End: Complemental strand, 31197175 - 31197078
Alignment:
Q  397 gagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggatta 496  Q
    |||||| |||||||||||||||||     | |||||||||||| | |||||||||||||| |||||| |||||||||| |||||||||||||| |||| |    
T  31197175 gagggatgaaattttaaatgatta-----tgcaagggtaattttccaggattaacgaatacagagacaaatttttaaatgacccctaattgcagggatga 31197081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 372 - 429
Target Start/End: Original strand, 16970823 - 16970880
Alignment:
Q  372 tgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttaca 429  Q
    |||| |||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  16970823 tgacatggcaatgattaagtggggagagggacgaaattttaaatgattaaattttaca 16970880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 438 - 499
Target Start/End: Original strand, 35152684 - 35152745
Alignment:
Q  438 ttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||| |||||| |||||| |||||||||||||||||||||||||||||| ||||    
T  35152684 ttgcaaggattagcgaatacagagactaatttttaaacgacccctaattgcaaggatgaaat 35152745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 398 - 499
Target Start/End: Complemental strand, 46899175 - 46899074
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaa 497  Q
    ||||||||||||||||||||||||   || ||| | || |||||||| |||| |||||| |  ||||||||||||||||||||||||||||| |||| ||    
T  46899175 agggacgaaattttaaatgattaatgattgcaaagctagtttgcaagaattagcgaatacatggaccaatttttaaacgacccctaattgcatggatgaa 46899076  T
Q  498 at 499  Q
    ||    
T  46899075 at 46899074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 400 - 493
Target Start/End: Original strand, 49955661 - 49955754
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||   | ||||||||| |||| ||||||||||| || | |||| |||||||||| ||| ||||||||||||||    
T  49955661 ggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattaacgattacaaagactaatttttaaatgacgcctaattgcaagga 49955754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 400 - 488
Target Start/End: Original strand, 4960825 - 4960913
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgc 488  Q
    ||||||||||||||||||||||   || ||||| || ||||||||||||| ||||||  | ||||||||||||||||||| ||||||||    
T  4960825 ggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacggggaccaatttttaaacgacctctaattgc 4960913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 401 - 493
Target Start/End: Complemental strand, 17189065 - 17188973
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||  | ||||||||| |||| ||||||| ||| || || ||| |||||||||| ||| ||||||||||||||    
T  17189065 gacgaaattttaaatgattaaataatgcaagggtaaattgccaggattagcgattacagggactaatttttaaatgacgcctaattgcaagga 17188973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 383 - 499
Target Start/End: Complemental strand, 35152472 - 35152356
Alignment:
Q  383 tgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccct 482  Q
    |||||||| || ||||||||| ||||||||||||||||||   |  |||||||| |||  || |||| ||| || || ||||||||||||||||||| ||    
T  35152472 tgattaagtggggagagggacaaaattttaaatgattaaacaatgtaagggtaaattggcagtattagcgattatagggaccaatttttaaacgacctct 35152373  T
Q  483 aattgcaaggattaaat 499  Q
    |||||||||||| ||||    
T  35152372 aattgcaaggatgaaat 35152356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 401 - 493
Target Start/End: Complemental strand, 40714555 - 40714463
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    ||||||||||||||||||||||   | ||||||||| |||| ||||||||||| || || ||| |||||||||| ||| ||||||||||||||    
T  40714555 gacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattaacgattacagggactaatttttaaatgacgcctaattgcaagga 40714463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 371 - 490
Target Start/End: Complemental strand, 1841600 - 1841481
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||| ||||| |||||||| || ||||| ||||||||||||||||||||||   |  |||||||| |||  ||||||| ||| ||  ||||||||||||    
T  1841600 gtgacatggcagtgattaagtggggagagtgacgaaattttaaatgattaaacaatgtaagggtaaattgtcaggattagcgattacggagaccaatttt 1841501  T
Q  471 taaacgacccctaattgcaa 490  Q
    |||||||| | |||||||||    
T  1841500 taaacgactcttaattgcaa 1841481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 398 - 493
Target Start/End: Complemental strand, 5734123 - 5734029
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||| ||||||||||||||||||   | ||||  |||||||||||||||| ||| || |  |||||||||||||||||||||||||||||||||    
T  5734123 agggacaaaattttaaatgattaaacaatgcaagactaatttgcaaggattagcgattacat-gaccaatttttaaacgacccctaattgcaagga 5734029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 400 - 499
Target Start/End: Complemental strand, 7821066 - 7820967
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||||||   | ||||||||| ||| |||||||| ||| || || ||| |||| ||||| ||||||||||||||||||| ||||    
T  7821066 ggacgaaattttaaatgattaaacaatgcaagggtaaattgtaaggattagcgattacagggactaattattaaaggacccctaattgcaaggatgaaat 7820967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 404 - 499
Target Start/End: Complemental strand, 24009683 - 24009588
Alignment:
Q  404 gaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||   || ||||| || || ||||||||||  ||||| |  |||||||||||||||||||||||||||||||||| ||||    
T  24009683 gaaattttaaatgattaatgattgcaaggctagttggcaaggattagtgaatacaaggaccaatttttaaacgacccctaattgcaaggatgaaat 24009588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 371 - 494
Target Start/End: Complemental strand, 32917401 - 32917278
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    |||| |||||| |||||||| || ||||| ||||||||||||||||||||||   | |||| ||||  ||  ||||||| ||| || || ||||||||||    
T  32917401 gtgatgtggcagtgattaagtggggagagagacgaaattttaaatgattaaacaatgcaagagtaaactgtcaggattagcgattacagggaccaatttt 32917302  T
Q  471 taaacgacccctaattgcaaggat 494  Q
    |||||||  |||||||||||||||    
T  32917301 taaacgattcctaattgcaaggat 32917278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 371 - 498
Target Start/End: Complemental strand, 42267444 - 42267317
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||||||| | |||||||| || ||||| |||||||| |||||||||||||||||   |||  || |||  |||||||| ||||| || ||||||||||    
T  42267444 gtgacgtggtagtgattaagtggggagagagacgaaatattaaatgattaaattttggcaggacaaattgtcaggattaaagaatacagggaccaatttt 42267345  T
Q  471 taaacgacccctaattgcaaggattaaa 498  Q
    |||| |||||||| ||||| ||| ||||    
T  42267344 taaatgacccctatttgcagggaataaa 42267317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 410 - 489
Target Start/End: Complemental strand, 44522249 - 44522170
Alignment:
Q  410 ttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgca 489  Q
    ||||||||||||| ||||||||| |||||||| ||||||||||| || || | |||||||||||| || |||||||||||    
T  44522249 ttaaatgattaaactttacaaggataatttgctaggattaacgattacagggtccaatttttaaatgatccctaattgca 44522170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 376 - 498
Target Start/End: Original strand, 10304147 - 10304269
Alignment:
Q  376 gtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaac 475  Q
    |||||| |||||||| || ||||| ||||||||||||||||||||||||||   | || || |||| || ||||||||||| |  ||||| ||||||||     
T  10304147 gtggcagtgattaagtggggagagagacgaaattttaaatgattaaattttgggaaggcaaattgccagaattaacgaatacattgaccattttttaaat 10304246  T
Q  476 gacccctaattgcaaggattaaa 498  Q
    |||||||| ||||| ||| ||||    
T  10304247 gacccctatttgcagggactaaa 10304269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 433 - 499
Target Start/End: Original strand, 13300253 - 13300319
Alignment:
Q  433 gtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||  ||||| ||||||||||||||||||||| ||||||||||| ||| ||||    
T  13300253 gtaatttgcaaggattagtgaatacagagaccaatttttaaacgacgcctaattgcaatgatgaaat 13300319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 363 - 449
Target Start/End: Original strand, 25065909 - 25065995
Alignment:
Q  363 gctaatcggtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggatta 449  Q
    ||||||| |||| |||||| |||||||| || |||||||||||||| |||||||||||| ||||||| ||||||  || ||||||||    
T  25065909 gctaatcagtgaggtggcagtgattaagtggagagagggacgaaatcttaaatgattaatttttacaggggtaaaatggaaggatta 25065995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 385 - 499
Target Start/End: Complemental strand, 46163157 - 46163043
Alignment:
Q  385 attaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaa 484  Q
    |||||| || ||||| ||||||||||||||||||||||   | ||||||||| |||  ||||||| ||| || |  ||||||||||||||||||||||||    
T  46163157 attaagtggggagagagacgaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacatggaccaatttttaaacgacccctaa 46163058  T
Q  485 ttgcaaggattaaat 499  Q
    || ||| ||| ||||    
T  46163057 ttacaatgatgaaat 46163043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 438 - 499
Target Start/End: Original strand, 14879312 - 14879373
Alignment:
Q  438 ttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||| |||||| |||||||||||||||||||| |||||||||||| ||| ||||    
T  14879312 ttgcaaggattagcgaatatagagaccaatttttaaacgatccctaattgcaatgatgaaat 14879373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 402 - 499
Target Start/End: Complemental strand, 19017739 - 19017642
Alignment:
Q  402 acgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||   || ||||  || |||| |||||||| |||||| ||| | |||||||||||| |||||||||||||||||| ||||    
T  19017739 acgaaattttaaatgattaatgattgcaagactagtttgtaaggattagcgaatacagaaatcaatttttaaacaacccctaattgcaaggatgaaat 19017642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 400 - 493
Target Start/End: Original strand, 20760819 - 20760912
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||   | ||||||||| |||| ||||||| ||| || |||||| |||||||||| ||| |||||||| |||||    
T  20760819 ggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagagactaatttttaaatgacgcctaattgtaagga 20760912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 398 - 487
Target Start/End: Complemental strand, 32132418 - 32132329
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattg 487  Q
    |||||||||||||||| |||||||| |||  ||| ||||||||||||||||||||| || |  ||| |||||||||| |||| |||||||    
T  32132418 agggacgaaattttaattgattaaactttgtaagagtaatttgcaaggattaacgattacatggacgaatttttaaatgaccactaattg 32132329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 400 - 493
Target Start/End: Complemental strand, 35038567 - 35038474
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||   |||||  ||||||||| ||||||||||| || |  || ||||||||||| ||||| ||||||||||||    
T  35038567 ggacgaaattttaaatgattaaacaatacaaaagtaatttgctaggattaacgattacatggatcaatttttaaatgacccttaattgcaagga 35038474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 438 - 499
Target Start/End: Complemental strand, 42533098 - 42533037
Alignment:
Q  438 ttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||| |  ||| |||||||||||||||||||||||||||||| ||||    
T  42533098 ttgcaaggattaacgaatacatggactaatttttaaacgacccctaattgcaaggatgaaat 42533037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 398 - 499
Target Start/End: Original strand, 46899914 - 46900015
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaa 497  Q
    ||||||||||||||||||||||||   || ||||| || |||||||| |||| |||||| |  |||||||||||||| ||||| |||||||| |||| ||    
T  46899914 agggacgaaattttaaatgattaatgattgcaaggctagtttgcaagaattagcgaatacattgaccaatttttaaatgacccttaattgcatggatgaa 46900013  T
Q  498 at 499  Q
    ||    
T  46900014 at 46900015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 371 - 499
Target Start/End: Complemental strand, 13245991 - 13245863
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    |||||||| || |||||||| || ||||||||| ||||||||| ||||||||||||   |||||||  ||| |||||||| ||||| |  ||||||||||    
T  13245991 gtgacgtgacagtgattaagtggggagagggacaaaattttaagtgattaaattttggcagggtaaaatgccaggattaaggaatacaaggaccaatttt 13245892  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    |||| ||  |||| ||||| ||| |||||    
T  13245891 taaatgaatcctatttgcagggactaaat 13245863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 1841775 - 1841873
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||  || ||||||||||||| |||||| || || ||||||||||||||||||| ||| ||||||| ||||    
T  1841775 ggacgaaattttaaatgattaatgattgcaagc-tagtttgcaaggattagcgaatacagggaacaatttttaaacgacccctcattacaaggatgaaat 1841873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 22103793 - 22103848
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaatttt 426  Q
    ||||||||||| |||||||| || ||||||||||||||||||| ||||||||||||    
T  22103793 gtgacgtggcagtgattaagtggagagagggacgaaattttaagtgattaaatttt 22103848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 375 - 493
Target Start/End: Original strand, 24905427 - 24905544
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || |||||||||||||||||||||||||||   || || || ||| |||| ||||||| | | || || ||| ||||||||||    
T  24905427 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaacaattgcagggctaaattgccaggattagcaattacag-gacgaatttttaaa 24905525  T
Q  475 cgacccctaattgcaagga 493  Q
    ||| || ||||||||||||    
T  24905526 cgatccataattgcaagga 24905544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 400 - 494
Target Start/End: Complemental strand, 45749954 - 45749860
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggat 494  Q
    |||||||||||||||||||||||   | |||| |||| |||  ||||||||||| || | |||| |||||||||| ||| |||||||||||||||    
T  45749954 ggacgaaattttaaatgattaaacaatgcaagtgtaaattgtcaggattaacgattacaaagactaatttttaaatgacgcctaattgcaaggat 45749860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 405 - 499
Target Start/End: Original strand, 48692335 - 48692429
Alignment:
Q  405 aaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||  |||  |||| ||||||||||| ||||||||||| |  || |||||||||||||||| |||||| ||| ||| ||||    
T  48692335 aaattttaaatgattaatgtttgtaaggctaatttgcaagaattaacgaatacaatgatcaatttttaaacgacctctaattacaatgatcaaat 48692429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 398 - 499
Target Start/End: Original strand, 5735025 - 5735126
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaa 497  Q
    ||||||||||||||||||||||||   ||  |||| || ||||||||||||| |||||| |   ||||||||||||||||  |||||||||| |||| ||    
T  5735025 agggacgaaattttaaatgattaatgattgtaaggctagtttgcaaggattagcgaatacatgaaccaatttttaaacgattcctaattgcagggatgaa 5735124  T
Q  498 at 499  Q
    ||    
T  5735125 at 5735126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 400 - 493
Target Start/End: Complemental strand, 31051062 - 31050969
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||   | ||| ||||| |||| ||||||| ||| || |||||| ||||||||||  || ||||||||||||||    
T  31051062 ggacgaaattttaaatgattaaacaatgcaaaggtaaattgccaggattagcgattacagagactaatttttaaataacgcctaattgcaagga 31050969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 438 - 499
Target Start/End: Original strand, 40772813 - 40772874
Alignment:
Q  438 ttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||| |||||| || |||| ||||| ||||||||||||||||||||||| ||||    
T  40772813 ttgcaaggattagcgaatacagggaccgattttcaaacgacccctaattgcaaggatgaaat 40772874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 21444735 - 21444680
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaatttt 426  Q
    ||||||||||| |||||||| || |||| |||||||||||||| ||||||||||||    
T  21444735 gtgacgtggcagtgattaagtggggagatggacgaaattttaagtgattaaatttt 21444680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 371 - 422
Target Start/End: Complemental strand, 43758963 - 43758912
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaa 422  Q
    ||||| ||||| |||||||| || ||||||||||||||||||||||||||||    
T  43758963 gtgacatggcagtgattaagtggagagagggacgaaattttaaatgattaaa 43758912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 48779435 - 48779534
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||  || ||||||||||||| | |||| |  ||| ||||||||| |||| ||||||||||||||| ||||    
T  48779435 ggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcaaatacatggactaatttttaagcgactcctaattgcaaggatgaaat 48779534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 403 - 493
Target Start/End: Complemental strand, 30326605 - 30326515
Alignment:
Q  403 cgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    ||||||||||||||||||||   | ||||||||| || | || |||| ||| || |||||| |||||||||| ||| ||||||||||||||    
T  30326605 cgaaattttaaatgattaaacaatgcaagggtaaattaccagaattagcgattacagagactaatttttaaatgacgcctaattgcaagga 30326515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 375 - 421
Target Start/End: Original strand, 31514577 - 31514623
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaa 421  Q
    ||||||| |||||||| || |||||||||||||||||||||||||||    
T  31514577 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 31514623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 489
Target Start/End: Original strand, 32133239 - 32133329
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgac-ccctaattgca 489  Q
    ||||||||||||||||||||||| ||| | ||| |||||||| | ||||||||| || |  ||| |||||||||| ||| |||||||||||    
T  32133239 ggacgaaattttaaatgattaaactttgcgaggctaatttgccaagattaacgattacaaggacgaatttttaaaggactccctaattgca 32133329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 375 - 421
Target Start/End: Original strand, 33442854 - 33442900
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaa 421  Q
    ||||||| |||||||| || |||||||||||||||||||||||||||    
T  33442854 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 33442900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 493
Target Start/End: Original strand, 44523423 - 44523545
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||||||||| |||||||| |  | |||||| |||||||||||||||||||   | ||||||||| |||| | ||||| ||| || ||| |  ||||||    
T  44523423 gtgacgtggcagtgattaagtgaagggagggatgaaattttaaatgattaaacaatgcaagggtaaattgccatgattagcgattatagatattaatttt 44523522  T
Q  471 taaacgacccctaattgcaagga 493  Q
    |||| ||  ||||||||||||||    
T  44523523 taaatgaggcctaattgcaagga 44523545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 400 - 493
Target Start/End: Complemental strand, 8898629 - 8898536
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||   |||||| |||| || | || |||| ||| || || ||| |||||||||| ||| ||||||||||||||    
T  8898629 ggacgaaattttaaatgattaaacaatacaagagtaaattaccagaattagcgattacagtgactaatttttaaatgacgcctaattgcaagga 8898536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 372 - 433
Target Start/End: Complemental strand, 13295275 - 13295214
Alignment:
Q  372 tgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaaggg 433  Q
    |||||||||| |||||||  ||  |||||||||| ||||||||||||||| |||||||||||    
T  13295275 tgacgtggcagtgattaaccgggaagagggacgacattttaaatgattaatttttacaaggg 13295214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 400 - 493
Target Start/End: Complemental strand, 24905279 - 24905186
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||| |||||||||||||||||   || ||||| ||| |||||||||||| | | || || ||| |||||||||| ||| ||||||||||||||    
T  24905279 ggaccaaattttaaatgattaacaattgcaaggctaaattgcaaggattagcaattacagggacgaatttttaaatgacgcctaattgcaagga 24905186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 400 - 493
Target Start/End: Complemental strand, 37929530 - 37929437
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    ||||||||||||||||||||||||  |  |||||||| |||  ||||||| |||  | || ||| |||||||||| ||| ||||||||||||||    
T  37929530 ggacgaaattttaaatgattaaataatgtaagggtaaattgtcaggattagcgataacagggactaatttttaaatgacgcctaattgcaagga 37929437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 400 - 493
Target Start/End: Original strand, 40714757 - 40714850
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||   | ||| ||||| |||| ||||||| ||| || |  ||| |||||||||| ||| ||||||||||||||    
T  40714757 ggacgaaattttaaatgattaaacaatgcaaaggtaaattgccaggattagcgattacatggactaatttttaaatgacgcctaattgcaagga 40714850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 404 - 493
Target Start/End: Original strand, 45750160 - 45750249
Alignment:
Q  404 gaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||   | |||| |||| |||| ||||||| ||| || | |||| |||||||||| ||| ||||||||||||||    
T  45750160 gaaattttaaatgattaaacaatgcaagagtaaattgctaggattagcgattacaaagactaatttttaaatgacgcctaattgcaagga 45750249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #102
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 400 - 493
Target Start/End: Complemental strand, 49955459 - 49955366
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||| ||||||||||||||||||   | ||||||||| |||| ||||||| ||| || || ||| |||||||||| ||  ||||||||||||||    
T  49955459 ggacaaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagggactaatttttaaatgatgcctaattgcaagga 49955366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #103
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 7821270 - 7821368
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||| |||||||||||   || || || || ||||||||||||| |||||| |  |||||||||||||||||||  ||||||||| ||| ||||    
T  7821270 ggacgaaattataaatgattaatgattgcacggctagtttgcaaggattagcgaatacat-gaccaatttttaaacgacctttaattgcaatgatgaaat 7821368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #104
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 437 - 480
Target Start/End: Original strand, 42534369 - 42534412
Alignment:
Q  437 tttgcaaggattaacgaatagagagaccaatttttaaacgaccc 480  Q
    ||||||| |||||||||||| |||||| ||||||||||||||||    
T  42534369 tttgcaaagattaacgaatacagagactaatttttaaacgaccc 42534412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #105
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 375 - 421
Target Start/End: Original strand, 4716728 - 4716774
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaa 421  Q
    ||||||| |||||||| || ||||| |||||||||||||||||||||    
T  4716728 cgtggcagtgattaagtggggagagagacgaaattttaaatgattaa 4716774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #106
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 465 - 499
Target Start/End: Original strand, 6518177 - 6518211
Alignment:
Q  465 aatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||||||||||||| ||||    
T  6518177 aatttttaaacgacccctaattgcaaggatgaaat 6518211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #107
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 405 - 499
Target Start/End: Original strand, 7231570 - 7231664
Alignment:
Q  405 aaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||| |||||   |||||| | || |||| || |||||| ||||| || || ||||||||||||||| ||||||| ||||||| ||||    
T  7231570 aaattttaaataattaatgattacaaagctagtttgtaaagattaatgaatacagtgatcaatttttaaacgactcctaattacaaggataaaat 7231664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #108
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 398 - 499
Target Start/End: Original strand, 40439503 - 40439604
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgaccc-ctaattgcaaggatta 496  Q
    |||||| || ||||||||||||||| |||   ||| || ||||||||||||| |||||| |  || |||||||||||||||||  ||||||||||||| |    
T  40439503 agggaccaatttttaaatgattaaactttgagaggttagtttgcaaggattagcgaataca-tgatcaatttttaaacgacccattaattgcaaggatga 40439601  T
Q  497 aat 499  Q
    |||    
T  40439602 aat 40439604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #109
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 375 - 421
Target Start/End: Complemental strand, 52134205 - 52134159
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaa 421  Q
    ||||||| |||||||| || |||||||||||||||||||| ||||||    
T  52134205 cgtggcagtgattaagtggggagagggacgaaattttaaacgattaa 52134159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #110
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 493
Target Start/End: Original strand, 17189173 - 17189258
Alignment:
Q  408 ttttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||   | ||||||||| |||| ||||||| ||| || || ||| |||||||||| |||  |||||||||||||    
T  17189173 ttttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagggactaatttttaaatgacgtctaattgcaagga 17189258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #111
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 493
Target Start/End: Original strand, 28011653 - 28011746
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||| |||||||||||||||||   || ||||| ||| |||| ||||||| | | || || ||| |||||||||| ||| ||||||||||||||    
T  28011653 ggaccaaattttaaatgattaacaattgcaaggctaaattgccaggattagcaattacagggacgaatttttaaatgacgcctaattgcaagga 28011746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #112
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 493
Target Start/End: Original strand, 32558421 - 32558514
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||  |||||||||||| ||   ||||||| ||| || ||  || |||||||||| |||  ||||||| |||||    
T  32558421 ggacgaaattttaaatgattaaacattacaagggtaaattatcaggattagcgattataggaactaatttttaaatgacgtctaattgtaagga 32558514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #113
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 401 - 493
Target Start/End: Original strand, 8898832 - 8898924
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    ||||||||||||||||||||||   | ||||||||| |||  || ||||  || || |||||| |||||||||| ||| ||||||| ||||||    
T  8898832 gacgaaattttaaatgattaaacaatgcaagggtaaattgtcagtattagtgattacagagactaatttttaaatgacgcctaattacaagga 8898924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #114
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 371 - 427
Target Start/End: Complemental strand, 25065074 - 25065018
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaatttta 427  Q
    ||||||||||| |||| ||| |  |||||||||||||| |||||||||||| |||||    
T  25065074 gtgacgtggcagtgatcaagtgaggagagggacgaaatcttaaatgattaattttta 25065018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #115
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 401 - 493
Target Start/End: Complemental strand, 28324915 - 28324824
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||  | ||||||||| |||  ||||||| ||| || |  || | | ||||||||||| ||||||||||||||    
T  28324915 gacgaaattttaaatgattaaataatgcaagggtaaattgtcaggattagcgattaca-tgaactaattttaaacgacgcctaattgcaagga 28324824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 164; Significance: 2e-87; HSPs: 127)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 192 - 426
Target Start/End: Original strand, 48529671 - 48529918
Alignment:
Q  192 ttgagtgtgtgtggttatatggcggcggtgatgattggtagatgaactgaatttcacattggagatgaatgaagatgaattgttgg-------------a 278  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||             |    
T  48529671 ttgagtgtgtgtggttatatggcggcggtgatgattggtatatgaactgaatttcagattggagatgaatgaagatgaattgttggattgtgtttttgga 48529770  T
Q  279 ttgaagaaagagttgggggcattttggtcattttgcttttggctgaagtcttaggggtatttttgtcagttcacatcatcttttgctaatcggtgacgtg 378  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  48529771 ttgaagaaagagttgggggcactttggtcaatttgcttttggctgaagtcttaagggtatttttgtcagttcacatcatcttttgctaatcagtgacgtg 48529870  T
Q  379 gcaatgattaagaggtgagagggacgaaattttaaatgattaaatttt 426  Q
    ||| |||||||| || ||||||||| ||||||||||||||||||||||    
T  48529871 gcagtgattaagtggagagagggacaaaattttaaatgattaaatttt 48529918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 15 - 122
Target Start/End: Original strand, 48529494 - 48529601
Alignment:
Q  15 caataacaaagaggaggaaagtgatcgagcatgtggaaggaaagaaaacaatgagaatttcatgtattacatagtgacatgagaaatgtagcaatggtgt 114  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||    
T  48529494 caataacaaagaggatgaaagtgatcgagcatgtggaaggaaagaaaacaatgagaatttcatgtattacatagtgacatgagatatggagtaatggtgt 48529593  T
Q  115 ttatatat 122  Q
    ||||||||    
T  48529594 ttatatat 48529601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 371 - 499
Target Start/End: Complemental strand, 24349815 - 24349687
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||||||||| |||||||  || |||||||||||||||||||||||||||   || ||||| || ||||||||||||| |||||| || ||||||||||    
T  24349815 gtgacgtggcagtgattaactggggagagggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagggaccaatttt 24349716  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||||||| ||||    
T  24349715 taaacgacccctaattgcaaggatcaaat 24349687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 371 - 499
Target Start/End: Complemental strand, 14801877 - 14801749
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||||||||| |||||||| || ||||||||||||||||||||||||||||   ||||||||||| |||  ||||||| ||| || | |||||||||||    
T  14801877 gtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatacaagggtaaattgtcaggattagcgattacaaagaccaatttt 14801778  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    |||||||| ||||||||||||||| ||||    
T  14801777 taaacgactcctaattgcaaggatgaaat 14801749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 375 - 499
Target Start/End: Complemental strand, 13058174 - 13058050
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || ||||||||||||||||||||||||||||   | || |||||| || | ||||||| ||| || |||||||||||||||||    
T  13058174 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaggggtaaattaccaggattagcgattacagagaccaatttttaaa 13058075  T
Q  475 cgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||| ||||    
T  13058074 cgacccctaattgcaaggatcaaat 13058050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 383 - 499
Target Start/End: Original strand, 50418936 - 50419052
Alignment:
Q  383 tgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccct 482  Q
    |||||||| || ||||||||||||||||||||||||||||   | ||||||||  |||| ||||||| ||| ||||| ||||||||||||||||||||||    
T  50418936 tgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtagattgccaggattagcgattagagggaccaatttttaaacgacccct 50419035  T
Q  483 aattgcaaggattaaat 499  Q
    |||||||||||| ||||    
T  50419036 aattgcaaggatcaaat 50419052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 395 - 499
Target Start/End: Complemental strand, 7451951 - 7451847
Alignment:
Q  395 gagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggat 494  Q
    ||||||||||||||||||||||||||||   | || |||||| |||| ||||||||||| || || ||||||||||||||||||||||||||||||||||    
T  7451951 gagagggacgaaattttaaatgattaaacaatgcaggggtaaattgccaggattaacgattacagggaccaatttttaaacgacccctaattgcaaggat 7451852  T
Q  495 taaat 499  Q
     ||||    
T  7451851 caaat 7451847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 395 - 499
Target Start/End: Original strand, 10781795 - 10781899
Alignment:
Q  395 gagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggat 494  Q
    |||||||||||||||||||||||||||   || ||||| || ||||||||||||| |||||| |  ||||||||||||||||||||||||||||||||||    
T  10781795 gagagggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacatggaccaatttttaaacgacccctaattgcaaggat 10781894  T
Q  495 taaat 499  Q
     ||||    
T  10781895 caaat 10781899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 383 - 499
Target Start/End: Complemental strand, 24711240 - 24711124
Alignment:
Q  383 tgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccct 482  Q
    |||||||| || ||||||||||||||||||||||||||||   | ||| ||||| |||| ||||||| ||| || || ||||||||||||||||||||||    
T  24711240 tgattaagtggggagagggacgaaattttaaatgattaaacaatgcaacggtaaattgccaggattagcgattacagggaccaatttttaaacgacccct 24711141  T
Q  483 aattgcaaggattaaat 499  Q
    |||||||||||| ||||    
T  24711140 aattgcaaggatcaaat 24711124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 371 - 499
Target Start/End: Original strand, 34765667 - 34765795
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||||||||| |||||||| || ||||||||||||||||||||||||||||   | ||| ||||| |||| ||||||| ||| || |   |||||||||    
T  34765667 gtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaaaggtaaattgccaggattagcgattacatgaaccaatttt 34765766  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||||||| ||||    
T  34765767 taaacgacccctaattgcaaggataaaat 34765795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 371 - 499
Target Start/End: Original strand, 35028285 - 35028413
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||||||||| |||||||| || ||||| ||||||||||||||||||||||   | ||||||||| |||||||||||| |||| | |  ||||||||||    
T  35028285 gtgacgtggcagtgattaagtggggagagtgacgaaattttaaatgattaaacaatgcaagggtaaattgcaaggattagcgaacatatggaccaatttt 35028384  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    ||||  |||||||||||||||||| ||||    
T  35028385 taaaatacccctaattgcaaggatgaaat 35028413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 371 - 494
Target Start/End: Complemental strand, 41582588 - 41582465
Alignment:
Q  371 gtgacgtggcaatgattaagaggtga-gagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaattt 469  Q
    |||||||||||||||||||  | ||| ||||||||||||||||||||||||| |||| || ||| ||||||| ||||||||||| ||||| |||||||||    
T  41582588 gtgacgtggcaatgattaactg-tgatgagggacgaaattttaaatgattaacttttgcaggggcaatttgccaggattaacgattagagggaccaattt 41582490  T
Q  470 ttaaacgacccctaattgcaaggat 494  Q
    ||||| ||||||| |||||| ||||    
T  41582489 ttaaatgacccctgattgcagggat 41582465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 375 - 499
Target Start/End: Original strand, 43155787 - 43155911
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || |||||||||||||||||||||||||||||  | || || ||| |||| ||||||||||| || || ||||||||||||||    
T  43155787 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaataatgcagggataaattgccaggattaacgattacagggaccaatttttaaa 43155886  T
Q  475 cgacccctaattgcaaggattaaat 499  Q
    ||||||||||||  |||||| ||||    
T  43155887 cgacccctaattataaggatcaaat 43155911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 375 - 499
Target Start/End: Original strand, 49879467 - 49879591
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || ||||||||||||||||||||||||||||   | ||||||||| |||  ||||||| ||| || ||||| || ||||||||    
T  49879467 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacagagatcagtttttaaa 49879566  T
Q  475 cgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||| ||||    
T  49879567 cgacccctaattgcaaggatcaaat 49879591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 7452119 - 7452218
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||| |||||||||||||||||   || ||||| || ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  7452119 ggactaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagagaccaatttttaaacgacccctaattgcaaggatcaaat 7452218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 371 - 494
Target Start/End: Original strand, 41583518 - 41583641
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||||||||| |||||||| |   |||||||||||||||||||||||||| |||| || ||| ||||||| ||||||| |||||| ||| | |||||||    
T  41583518 gtgacgtggcagtgattaagtgagaagagggacgaaattttaaatgattaacttttgcaggggcaatttgccaggattagcgaatacagaaatcaatttt 41583617  T
Q  471 taaacgacccctaattgcaaggat 494  Q
    |||| |||||||||||||| ||||    
T  41583618 taaatgacccctaattgcagggat 41583641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 376 - 499
Target Start/End: Original strand, 44967330 - 44967453
Alignment:
Q  376 gtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaac 475  Q
    |||||| |||||||| || ||||||||||||||||||||||||||||   | || |||||| |||| ||||||| ||| || || |||||||||||||||    
T  44967330 gtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaggggtaaattgccaggattagcgattacagggaccaatttttaaac 44967429  T
Q  476 gacccctaattgcaaggattaaat 499  Q
    |||| |||||||||||||| ||||    
T  44967430 gacctctaattgcaaggatcaaat 44967453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 400 - 499
Target Start/End: Complemental strand, 50418780 - 50418681
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||| || ||||||||||||||||| || || |||||||||||||||||||||||||||||||||| ||||    
T  50418780 ggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattaacgattacagggaccaatttttaaacgacccctaattgcaaggatcaaat 50418681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 51692835 - 51692934
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||| || ||||||||||||| |||||| || |||||||||||||||||||||||||||||||||| ||||    
T  51692835 ggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattgcaaggatgaaat 51692934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 372 - 499
Target Start/End: Original strand, 55867402 - 55867529
Alignment:
Q  372 tgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaattttt 471  Q
    |||||||||| |||||||  ||  | |||||||||||||||||||||||||   | |||||||| ||||||||||||||||| || |  |||||||||||    
T  55867402 tgacgtggcagtgattaactgggaatagggacgaaattttaaatgattaaacaatgcaagggtagtttgcaaggattaacgattacatggaccaattttt 55867501  T
Q  472 aaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||| |||| ||||    
T  55867502 aaacgacccctaattgcagggatcaaat 55867529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 378 - 492
Target Start/End: Complemental strand, 37248370 - 37248256
Alignment:
Q  378 ggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacga 477  Q
    |||| |||||||| || ||||| ||||||||||||||||||||||   | ||||||||| |||| ||||||| ||| || || |||||||||||||||||    
T  37248370 ggcagtgattaagtggggagagcgacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagggaccaatttttaaacga 37248271  T
Q  478 cccctaattgcaagg 492  Q
    |||||||||||||||    
T  37248270 cccctaattgcaagg 37248256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 375 - 499
Target Start/End: Complemental strand, 18831486 - 18831362
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || ||||| ||||||||||||||||||||||   | ||||||||| || | ||||||| ||| || || ||||||||||||||    
T  18831486 cgtggcagtgattaagtggggagagagacgaaattttaaatgattaaacaatgcaagggtaaattaccaggattagcgattacagggaccaatttttaaa 18831387  T
Q  475 cgacccctaattgcaaggattaaat 499  Q
    ||||||||||||| |||||| ||||    
T  18831386 cgacccctaattgtaaggatcaaat 18831362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 375 - 499
Target Start/End: Complemental strand, 23613446 - 23613322
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || ||||||||||||||||||||||||||||   | || |||||| |||| | ||||| ||| || |  ||||||||||||||    
T  23613446 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaggggtaaattgccaagattagcgattacatggaccaatttttaaa 23613347  T
Q  475 cgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||| ||||    
T  23613346 cgacccctaattgcaaggatcaaat 23613322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 371 - 499
Target Start/End: Complemental strand, 53701953 - 53701825
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||||||||| |||||||| || |||||||| |||||||||||||||||||   | ||||| ||| |||  |||||||  || || ||||| |||||||    
T  53701953 gtgacgtggcagtgattaagtggggagagggaagaaattttaaatgattaaacaatgcaaggataaattgtcaggattagagattacagagatcaatttt 53701854  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||||||| ||||    
T  53701853 taaacgacccctaattgcaaggatgaaat 53701825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 148071 - 148170
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||  || |||||||||||||||||||| || ||||||||||||||||||||||||||||| |||| ||||    
T  148071 ggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattaacgaataaagggaccaatttttaaacgacccctaattgcagggatgaaat 148170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 398 - 489
Target Start/End: Original strand, 32063650 - 32063741
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgca 489  Q
    ||||||| ||||||||||||||||| ||| |||||||||||||| || |||||||| || ||| ||||||||||||| ||||||||||||||    
T  32063650 agggacggaattttaaatgattaaactttgcaagggtaatttgccagtattaacgattacagaaaccaatttttaaatgacccctaattgca 32063741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 371 - 494
Target Start/End: Complemental strand, 40387608 - 40387485
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||||||||| |||||||| |   ||||| |||||||||||||||||||| |||| || ||| ||||||| ||||||| |||||| || ||||||||||    
T  40387608 gtgacgtggcagtgattaagtgagaagaggaacgaaattttaaatgattaacttttgcaggggcaatttgccaggattagcgaatacagggaccaatttt 40387509  T
Q  471 taaacgacccctaattgcaaggat 494  Q
    |||| | |||||||||||| ||||    
T  40387508 taaatggcccctaattgcagggat 40387485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 400 - 499
Target Start/End: Complemental strand, 44967181 - 44967082
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||| |||||||||||||||||   || ||||| || |||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  44967181 ggactaaattttaaatgattaatgattgcaaggctagtttgtaaggattagcgaatacagagaccaatttttaaacgacccctaattgcaaggatcaaat 44967082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 375 - 493
Target Start/End: Complemental strand, 27934669 - 27934551
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || |||||||||||||||||||||||||||   || ||||| ||| |||| ||||||| | | || || ||| ||||||||||    
T  27934669 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaacaattgcaaggctaaattgccaggattagcaattacagggacaaatttttaaa 27934570  T
Q  475 cgacccctaattgcaagga 493  Q
    |||||||||||||||||||    
T  27934569 cgacccctaattgcaagga 27934551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 401 - 499
Target Start/End: Complemental strand, 35028109 - 35028011
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||||   || ||||| || ||||||||||||| |||||| ||  ||||||||||||||||||||||||||||||||| ||||    
T  35028109 gacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacaggaaccaatttttaaacgacccctaattgcaaggatgaaat 35028011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 401 - 486
Target Start/End: Original strand, 11448046 - 11448131
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaatt 486  Q
    ||||||||||||||||||||||   | |||||||||||||||||||||| ||| || ||||| |||||||||||||||||||||||    
T  11448046 gacgaaattttaaatgattaaacaatgcaagggtaatttgcaaggattagcgattacagagatcaatttttaaacgacccctaatt 11448131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 375 - 499
Target Start/End: Original strand, 36009104 - 36009229
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || ||||||||||||||||||||||||||||   | || |||||| || | ||||||||||| || || ||||||||||||||    
T  36009104 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaggggtaaatttccaggattaacgattacagggaccaatttttaaa 36009203  T
Q  475 cga-cccctaattgcaaggattaaat 499  Q
    ||| ||||||||| ||||||| ||||    
T  36009204 cgaccccctaattacaaggatcaaat 36009229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 375 - 499
Target Start/End: Complemental strand, 5369084 - 5368960
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || ||||||||| ||||||||||||||||||   | || |||||| |||| ||||||| ||| || |  ||||||||||||||    
T  5369084 cgtggcagtgattaagtggggagagggacaaaattttaaatgattaaacaatgcaggggtaaattgccaggattagcgattacaaggaccaatttttaaa 5368985  T
Q  475 cgacccctaattgcaaggattaaat 499  Q
    ||| |||||||||||||||| ||||    
T  5368984 cgatccctaattgcaaggatcaaat 5368960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 371 - 499
Target Start/End: Original strand, 17356209 - 17356337
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    |||||||| || |||||||| || |||||||||||||||||||||||| |||   | |||| |||| |||| | ||||| |||||| || ||||||||||    
T  17356209 gtgacgtgacagtgattaagtggggagagggacgaaattttaaatgatcaaacaatgcaagagtaaattgccaagattagcgaatacagggaccaatttt 17356308  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    |||||||||| |||||| |||||| ||||    
T  17356309 taaacgacccgtaattggaaggatgaaat 17356337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 565 - 621
Target Start/End: Complemental strand, 38735613 - 38735557
Alignment:
Q  565 ccttcaaaatttataataatattaattttagttgataaatttctattggagaataat 621  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  38735613 ccttcaaaatttctaataatattaattttagttgataaatttctattggagaataat 38735557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 371 - 499
Target Start/End: Complemental strand, 52909394 - 52909266
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||| ||||| |||||||| || |||| |||||||||||||||||||||||   | ||||||||| |||  ||||||| ||| || || ||||||||||    
T  52909394 gtgacatggcagtgattaagtggggagatggacgaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacagtgaccaatttt 52909295  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    | |||||||||||||||||| ||| ||||    
T  52909294 tgaacgacccctaattgcaaagatgaaat 52909266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 13058298 - 13058397
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||| |||||||||||||||||   || ||||| || ||||||||||||| |||||| || |||||||||||||||||||||| ||||||||||| ||||    
T  13058298 ggactaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagggaccaatttttaaacgaccccttattgcaaggatcaaat 13058397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 404 - 499
Target Start/End: Original strand, 18831637 - 18831732
Alignment:
Q  404 gaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||   || ||||| || ||||||| ||||| |||||| || |||||||||||||||||||||||||||||||||| ||||    
T  18831637 gaaattttaaatgattaatgattgcaaggttagtttgcaatgattagcgaatacagggaccaatttttaaacgacccctaattgcaaggatgaaat 18831732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 24350748 - 24350847
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||| | || ||||||||||||| |||||  || |||||||||||||||||||||||||||||||||| ||||    
T  24350748 ggacgaaattttaaatgattaatgattgcaaagctagtttgcaaggattagcgaatgcagggaccaatttttaaacgacccctaattgcaaggatcaaat 24350847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 39539234 - 39539333
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||||||   | ||||| ||||||||||| |||||||| || |  |||||||||||||||||||| ||||||||||||| ||||    
T  39539234 ggacgaaattttaaatgattaaagaatgcaaggctaatttgcaagaattaacgattacattgaccaatttttaaacgacccttaattgcaaggatgaaat 39539333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 400 - 499
Target Start/End: Complemental strand, 49879319 - 49879220
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||| || ||||||||||||| | | || || |||||||||||||||||||||||||||||||||| ||||    
T  49879319 ggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcaattacagggaccaatttttaaacgacccctaattgcaaggatcaaat 49879220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 375 - 493
Target Start/End: Original strand, 9400779 - 9400897
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || |||||||| ||||||||||||||||||   || ||||| ||| |||| ||||||| | | || || ||| ||||||||||    
T  9400779 cgtggcagtgattaagtggggagagggatgaaattttaaatgattaacaattgcaaggctaaattgccaggattagcaattacagggacgaatttttaaa 9400878  T
Q  475 cgacccctaattgcaagga 493  Q
    |||||||||||||||||||    
T  9400879 cgacccctaattgcaagga 9400897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 401 - 499
Target Start/End: Original strand, 24711397 - 24711495
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||||   || ||||| || |||||||||||||||||  | |  |||||||||||||||||||||||||||||||||| ||||    
T  24711397 gacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattaacgatgacatggaccaatttttaaacgacccctaattgcaaggatcaaat 24711495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 405 - 499
Target Start/End: Complemental strand, 43155636 - 43155542
Alignment:
Q  405 aaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||   || ||||| || ||||||||||||| |||||| || |||||||||||||||||||| ||||||||||||| ||||    
T  43155636 aaattttaaatgattaacgattgcaaggctagtttgcaaggattagcgaatacagggaccaatttttaaacgacccttaattgcaaggatcaaat 43155542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 437 - 499
Target Start/End: Complemental strand, 48528560 - 48528498
Alignment:
Q  437 tttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  48528560 tttgcaaggattgacgaatacagagaccaatttttaaacgacccctaattgcaaggatcaaat 48528498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 383 - 499
Target Start/End: Original strand, 54086994 - 54087110
Alignment:
Q  383 tgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccct 482  Q
    |||||||| || ||||| ||||||||||||||||||||||   | ||||||||| |||  | ||||||||| || || ||||||||||||||||||||||    
T  54086994 tgattaagtggggagagagacgaaattttaaatgattaaacaatgcaagggtaaattgtcatgattaacgattacagggaccaatttttaaacgacccct 54087093  T
Q  483 aattgcaaggattaaat 499  Q
    |||| ||| ||| ||||    
T  54087094 aattacaatgatgaaat 54087110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 404 - 499
Target Start/End: Original strand, 1179120 - 1179215
Alignment:
Q  404 gaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||   || ||||| || ||||||||||||| |||||| |  |||||||||||||||||||||||||||||| ||| ||||    
T  1179120 gaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacatggaccaatttttaaacgacccctaattgcaaagataaaat 1179215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 404 - 499
Target Start/End: Complemental strand, 10780821 - 10780726
Alignment:
Q  404 gaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||   || ||||| || ||||||||||||| |||||  |  |||||||||||||||||||||||||||||||||| ||||    
T  10780821 gaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatgcatggaccaatttttaaacgacccctaattgcaaggatcaaat 10780726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 404 - 499
Target Start/End: Complemental strand, 10974430 - 10974335
Alignment:
Q  404 gaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||   || ||||| || ||||||||||||| |||||  |  |||||||||||||||||||||||||||||||||| ||||    
T  10974430 gaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatgcatggaccaatttttaaacgacccctaattgcaaggatcaaat 10974335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 400 - 499
Target Start/End: Complemental strand, 34765492 - 34765393
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||| || ||||||||||||| |||||| |  |||| ||||||||||||||| ||||||||||||| ||||    
T  34765492 ggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacaaggaccgatttttaaacgacccttaattgcaaggataaaat 34765393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 37248521 - 37248620
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||| ||||||||||   || ||||  || ||||||||||||| ||| || || |||||||||||||||||||||||||||||||||| ||||    
T  37248521 ggacgaaatttaaaatgattaatgattgcaagactagtttgcaaggattagcgattacagggaccaatttttaaacgacccctaattgcaaggatcaaat 37248620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 46661230 - 46661329
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||| || ||||| |||||||   |||| || |||||||||||||||||||||||||||||||||| ||||    
T  46661230 ggacgaaattttaaatgattaatgattgcaaggctagtttgcgaggattagtaaatacagggaccaatttttaaacgacccctaattgcaaggatgaaat 46661329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 400 - 499
Target Start/End: Complemental strand, 54086807 - 54086708
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||| |||||||||||||||||   |||||||  ||  ||  |||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  54086807 ggacaaaattttaaatgattaatgattacaagactagctttgaaggattagcgaatacagagaccaatttttaaacgacccctaattgcaaggatgaaat 54086708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 398 - 488
Target Start/End: Complemental strand, 8438394 - 8438305
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgc 488  Q
    ||||||||||||||||||||||||  ||| |||| ||||||||| ||||||||||| || |  |||||||||||||| |||||||||||||    
T  8438394 agggacgaaattttaaatgattaaggtttgcaagagtaatttgccaggattaacgattaca-tgaccaatttttaaatgacccctaattgc 8438305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 405 - 499
Target Start/End: Original strand, 23613599 - 23613693
Alignment:
Q  405 aaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||    || ||||  |||||||||||||||| |||||| || || ||||||||||||||||||||||||||||||| ||||    
T  23613599 aaattttaaatgattagtgattgcaagactaatttgcaaggattagcgaatacagggatcaatttttaaacgacccctaattgcaaggatcaaat 23613693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 398 - 487
Target Start/End: Complemental strand, 30641632 - 30641545
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattg 487  Q
    ||||||||||||||||||||||||| |||  || |||||||||||||||||||||| |  | |||| |||||||||| ||||||||||||    
T  30641632 agggacgaaattttaaatgattaaactttgtaatggtaatttgcaaggattaacgatt--acagacaaatttttaaatgacccctaattg 30641545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 400 - 486
Target Start/End: Complemental strand, 32062701 - 32062615
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaatt 486  Q
    ||||||||||||||||||||||||||||||||| |||||||  |||||||| |  || |  |||||||||||||| |||||||||||    
T  32062701 ggacgaaattttaaatgattaaattttacaaggctaatttgtcaggattaatgtttacaaggaccaatttttaaatgacccctaatt 32062615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 371 - 499
Target Start/End: Original strand, 53129793 - 53129921
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaata-gagagaccaattt 469  Q
    |||| |||||| |||||||| || |||||||||||||||||||| ||| |||   | | ||||||| |||||||||||| ||| || ||| || ||||||    
T  53129793 gtgatgtggcagtgattaagtggggagagggacgaaattttaaacgatgaaacaatgcgagggtaaattgcaaggattagcgattacgag-gatcaattt 53129891  T
Q  470 ttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||| ||||||||||| ||||    
T  53129892 ttaaacgacccctgattgcaaggatgaaat 53129921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 400 - 493
Target Start/End: Complemental strand, 54713741 - 54713649
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    ||||||||||||||||||||||   || ||||| || ||||||||||||| |||||| |||||  ||||||||||||||||| |||||||||||    
T  54713741 ggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagagattaatttttaaacgacccc-aattgcaagga 54713649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 401 - 493
Target Start/End: Complemental strand, 11524060 - 11523968
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    ||||||||||||||||||||||   | ||||||||  |||| ||||||||||| || |||||| |||||||||| ||| ||||||||||||||    
T  11524060 gacgaaattttaaatgattaaacaatgcaagggtatattgccaggattaacgattacagagactaatttttaaatgacgcctaattgcaagga 11523968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 371 - 499
Target Start/End: Original strand, 15507960 - 15508087
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    |||||| |||| |||||||| || ||||| ||||||||||||||||||||||   | ||| ||||| |||  ||||||| ||| || | ||  |||||||    
T  15507960 gtgacgcggcagtgattaagtggggagagagacgaaattttaaatgattaaaccatgcaatggtaaattgtcaggattagcgattaca-aggacaatttt 15508058  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||||||| ||||    
T  15508059 taaacgacccctaattgcaaggatgaaat 15508087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 401 - 493
Target Start/End: Original strand, 39667091 - 39667183
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    ||||||||||||||||||||||   | |||||||||||| | ||||||||||| || || |||||||||||||| ||||| ||||| ||||||    
T  39667091 gacgaaattttaaatgattaaacaatgcaagggtaatttaccaggattaacgattacagggaccaatttttaaatgacccgtaattacaagga 39667183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 401 - 493
Target Start/End: Complemental strand, 45463184 - 45463092
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    ||||||||||||||||||||||   | ||||||||| |||| ||||||| ||| || |||||| |||||||||| ||| ||||||||||||||    
T  45463184 gacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagagactaatttttaaatgacgcctaattgcaagga 45463092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 499
Target Start/End: Complemental strand, 51692670 - 51692566
Alignment:
Q  395 gagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggat 494  Q
    ||||||||||||||||||| ||||||||   | ||||||||| |||  ||||||| ||| || | ||| |||||||||||||||| ||||||||||||||    
T  51692670 gagagggacgaaattttaagtgattaaacaatgcaagggtaaattgtcaggattagcgattacatagatcaatttttaaacgacctctaattgcaaggat 51692571  T
Q  495 taaat 499  Q
     ||||    
T  51692570 gaaat 51692566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 400 - 483
Target Start/End: Original strand, 5369183 - 5369266
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgaccccta 483  Q
    |||| |||||||||||||||||   || ||||| || |||||||||||||||||||  || |||||||||||||||||||||||    
T  5369183 ggactaaattttaaatgattaatgattgcaaggctagtttgcaaggattaacgaatgcagggaccaatttttaaacgaccccta 5369266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 398 - 489
Target Start/End: Complemental strand, 11446384 - 11446293
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgca 489  Q
    ||||||||||||||||| ||||||| ||| |||||||||||||| ||||||||||| |  |   ||||||||||||| |||| |||||||||    
T  11446384 agggacgaaattttaaaagattaaactttgcaagggtaatttgccaggattaacgattccatgaaccaatttttaaatgacctctaattgca 11446293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 400 - 499
Target Start/End: Complemental strand, 36008956 - 36008857
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||| |||||||||||||||||   || ||||| || ||||||| ||||| |||||| || ||||||||||||||||| |||||||| ||||||| ||||    
T  36008956 ggactaaattttaaatgattaatgattgcaaggctagtttgcaatgattagcgaatacagggaccaatttttaaacgatccctaattacaaggatcaaat 36008857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 52909569 - 52909668
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||| |||||   || ||||| || ||||||||||||| |||||| | ||||||||||||||| || || ||||||||||||| ||||    
T  52909569 ggacgaaattttaaataattaatgattgcaaggctagtttgcaaggattagcgaatacatagaccaatttttaaatgatccataattgcaaggatgaaat 52909668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 375 - 493
Target Start/End: Original strand, 4982986 - 4983104
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || |||||||||||||||||||||||||||   || ||||| ||| |||| ||||||| | | || |  ||  ||||||||||    
T  4982986 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaataattgcaaggctaaattgcgaggattagcaattacaaggatgaatttttaaa 4983085  T
Q  475 cgacccctaattgcaagga 493  Q
    |||| ||||||||||||||    
T  4983086 cgacgcctaattgcaagga 4983104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 437 - 499
Target Start/End: Complemental strand, 15507748 - 15507686
Alignment:
Q  437 tttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||| |||||| || |||||||||||||||||||| ||||||||||||| ||||    
T  15507748 tttgcaaggattagcgaatatagggaccaatttttaaacgacccttaattgcaaggatgaaat 15507686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 371 - 493
Target Start/End: Complemental strand, 16605743 - 16605621
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||||||||| |||||||| || | |||||||||||||||||||||||||    | ||||||||| |||  ||| || |||| || || ||| ||||||    
T  16605743 gtgacgtggcagtgattaagtggggggagggacgaaattttaaatgattaatcaatgcaagggtaaattggcaggtttgacgattacagggactaatttt 16605644  T
Q  471 taaacgacccctaattgcaagga 493  Q
    |||| ||| ||||||||||||||    
T  16605643 taaatgacacctaattgcaagga 16605621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 375 - 493
Target Start/End: Original strand, 33247533 - 33247651
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || |||||||| ||||||||||||||||||   || ||||| ||| |||| ||||||| | | || || |||  |||||||||    
T  33247533 cgtggcagtgattaagtggggagagggatgaaattttaaatgattaacaattgcaaggctaaattgccaggattagcaattacagggacggatttttaaa 33247632  T
Q  475 cgacccctaattgcaagga 493  Q
    ||| |||||||||||||||    
T  33247633 cgatccctaattgcaagga 33247651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 398 - 487
Target Start/End: Complemental strand, 147433 - 147344
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattg 487  Q
    |||||| ||||||||||| |||||   || ||||  || ||||||||||||| |||||| || |||||||||||||||||||||||||||    
T  147433 agggacaaaattttaaattattaatgattgcaagactagtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattg 147344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 400 - 493
Target Start/End: Original strand, 10408203 - 10408296
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||   | ||||||||| |||| ||||||| ||| || || ||| |||||||||| ||| ||||||||||||||    
T  10408203 ggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagggactaatttttaaatgacgcctaattgcaagga 10408296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 442 - 491
Target Start/End: Original strand, 16006151 - 16006200
Alignment:
Q  442 aaggattaacgaatagagagaccaatttttaaacgacccctaattgcaag 491  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  16006151 aaggattagcgaatacagagaccaatttttaaacgacccctaattgcaag 16006200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 371 - 499
Target Start/End: Complemental strand, 37976294 - 37976166
Alignment:
Q  371 gtgacgtggcaatgattaaga-ggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaattt 469  Q
    ||||||||||||||||||||  ||| | ||| ||||||||||||||||||||   || ||||  || ||||||| ||||| |||||| ||  |||| |||    
T  37976294 gtgacgtggcaatgattaagttggtcaaagg-acgaaattttaaatgattaatgattgcaagactagtttgcaaagattagcgaatacaggaaccagttt 37976196  T
Q  470 ttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||| |||||||||||||| ||||    
T  37976195 ttaaacgacctctaattgcaaggatgaaat 37976166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 400 - 493
Target Start/End: Original strand, 50504139 - 50504232
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||   | ||||||||| ||||  |||||||||| || |||||| |||||||||| ||| ||||||| ||||||    
T  50504139 ggacgaaattttaaatgattaaacaatgcaagggtaaattgcctggattaacgattacagagactaatttttaaatgacgcctaattacaagga 50504232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 400 - 493
Target Start/End: Original strand, 54858874 - 54858967
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||   | ||||||||| |||| ||||||||||| || |  ||| |||||||||| ||| ||||||||||||||    
T  54858874 ggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattaacgattacatggactaatttttaaatgacgcctaattgcaagga 54858967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 398 - 486
Target Start/End: Original strand, 8439538 - 8439626
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaatt 486  Q
    ||||||||||||||||||||||||  ||| ||||| |||||||| ||||||||||| || |  || |||||||||||| |||| |||||    
T  8439538 agggacgaaattttaaatgattaatgtttgcaaggataatttgctaggattaacgattacaatgatcaatttttaaacaacccttaatt 8439626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 371 - 499
Target Start/End: Complemental strand, 24411499 - 24411371
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||||||| | |||||||| ||  |||||||||||  ||||||||||||||   | ||||||||| |||  ||| ||| ||| || || ||||||||||    
T  24411499 gtgacgtgggagtgattaagtgggaagagggacgaatctttaaatgattaaacaatgcaagggtaaattgtcagggttagcgattacagggaccaatttt 24411400  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    ||||| |||||||||||| ||||| ||||    
T  24411399 taaactacccctaattgctaggatgaaat 24411371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 398 - 494
Target Start/End: Original strand, 40388420 - 40388516
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggat 494  Q
    |||||||||||||||||||||||| ||||    ||| ||||||| ||||||| ||| ||||| |||||||||||||| | ||| |||||||| ||||    
T  40388420 agggacgaaattttaaatgattaacttttgttggggcaatttgccaggattagcgattagagggaccaatttttaaatggcccttaattgcagggat 40388516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 428 - 499
Target Start/End: Original strand, 24411692 - 24411763
Alignment:
Q  428 caagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||| || ||||||||||||| |||||| || || ||||||||||||||||| ||||||||||||| ||||    
T  24411692 caaggttagtttgcaaggattagcgaatacagggatcaatttttaaacgacccttaattgcaaggatgaaat 24411763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 493
Target Start/End: Original strand, 29321231 - 29321314
Alignment:
Q  410 ttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    ||||||||||||| |||  || |||||||||| || |||||||| || ||| ||||||||||||| ||||| ||||||||||||    
T  29321231 ttaaatgattaaaatttgaaaaggtaatttgccagaattaacgattatagaaaccaatttttaaatgacccttaattgcaagga 29321314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 398 - 489
Target Start/End: Original strand, 30642460 - 30642551
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgca 489  Q
    ||||||||||||||||||||||||| ||| ||||  |||||||| ||||||||||| || |  ||  |||||||||| ||||| ||||||||    
T  30642460 agggacgaaattttaaatgattaaactttgcaagactaatttgctaggattaacgattacaatgatgaatttttaaatgacccataattgca 30642551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 372 - 499
Target Start/End: Original strand, 35508528 - 35508655
Alignment:
Q  372 tgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaattttt 471  Q
    |||| ||||| |||||||| || |||||  |||||||||||||||||||||   | ||||||||| |||  || |||||||| || |  ||  |||||||    
T  35508528 tgacatggcagtgattaagtggggagagatacgaaattttaaatgattaaacaatgcaagggtaaattgttagaattaacgattacaaggattaattttt 35508627  T
Q  472 aaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||| ||| ||||    
T  35508628 aaacgacccctaattgcaatgataaaat 35508655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 52298167 - 52298112
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaatttt 426  Q
    ||||||||||| |||||||| || ||||| ||||||||||||||||||||||||||    
T  52298167 gtgacgtggcagtgattaagtggggagagagacgaaattttaaatgattaaatttt 52298112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 405 - 499
Target Start/End: Original strand, 11108161 - 11108255
Alignment:
Q  405 aaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||   || ||||  || ||||||||||||| |||||| |  || |||||||||||||| |||||||||||||||| ||||    
T  11108161 aaattttaaatgattaatgattgcaagactagtttgcaaggattagcgaatacaaggatcaatttttaaacgatccctaattgcaaggatgaaat 11108255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 401 - 499
Target Start/End: Complemental strand, 17356036 - 17355938
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||||    | ||||  || ||||||| ||||| |||||| ||  ||||||||||||||||| ||||||||||||||| ||||    
T  17356036 gacgaaattttaaatgattaatgaatgcaagactagtttgcaaagattagcgaatacagcaaccaatttttaaacgactcctaattgcaaggatgaaat 17355938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 375 - 493
Target Start/End: Complemental strand, 22566936 - 22566818
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || |||||||| ||||||||||||||||||   || ||||| ||| |||| ||||||| | | || ||  || ||||||||||    
T  22566936 cgtggcagtgattaagtggggagagggatgaaattttaaatgattaacaattgcaaggctaaattgccaggattagcaattacaggaacgaatttttaaa 22566837  T
Q  475 cgacccctaattgcaagga 493  Q
    ||| |||||||| ||||||    
T  22566836 cgatccctaattacaagga 22566818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 405 - 486
Target Start/End: Complemental strand, 10203728 - 10203647
Alignment:
Q  405 aaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaatt 486  Q
    ||||||||||||||||||||||| |||| |||||||  || |||||||| || || ||| |||||||||| ||||| |||||    
T  10203728 aaattttaaatgattaaattttataaggataatttgtcagaattaacgattacagtgactaatttttaaatgacccttaatt 10203647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 400 - 493
Target Start/End: Complemental strand, 27069022 - 27068929
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||   | ||||||||| |||| ||||||| ||| || || ||| |||||||||| ||  ||||||||||||||    
T  27069022 ggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagggactaatttttaaatgatgcctaattgcaagga 27068929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 371 - 488
Target Start/End: Original strand, 37976440 - 37976557
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||| ||||| |||||||| || ||||| ||||||||||||||||||||||   | ||| | ||| |||  || |||| ||| || || || |||||||    
T  37976440 gtgacatggcagtgattaagtggggagagtgacgaaattttaaatgattaaacaatgcaatgataaattgtcagaattagcgattacagggatcaatttt 37976539  T
Q  471 taaacgacccctaattgc 488  Q
    ||||||||||||||||||    
T  37976540 taaacgacccctaattgc 37976557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 400 - 493
Target Start/End: Complemental strand, 54858672 - 54858579
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||   | ||||||||| |||  ||||||| ||| || || ||| |||||||||| ||| ||||||||||||||    
T  54858672 ggacgaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacagggactaatttttaaatgacgcctaattgcaagga 54858579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 401 - 493
Target Start/End: Complemental strand, 3032693 - 3032601
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    ||||||||||||||||||||||   | ||||||||| |||| ||||||| ||| || |  ||| |||||||||| ||| ||||||||||||||    
T  3032693 gacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacaaggactaatttttaaatgacgcctaattgcaagga 3032601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 499
Target Start/End: Complemental strand, 16005955 - 16005851
Alignment:
Q  395 gagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggat 494  Q
    ||||||||||||||||||||||||||||   |||| || ||| |||| || |||| ||| || || ||  ||||||||||||||||||||||  ||||||    
T  16005955 gagagggacgaaattttaaatgattaaacaatacatggataaattgccagaattagcgattacagggattaatttttaaacgacccctaattataaggat 16005856  T
Q  495 taaat 499  Q
     ||||    
T  16005855 caaat 16005851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 401 - 493
Target Start/End: Original strand, 27069225 - 27069317
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    ||||||||||||||||||||||   | ||||||||| |||| ||||||| | | || || ||| |||||||||| ||| ||||||||||||||    
T  27069225 gacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcaattacagggactaatttttaaatgacgcctaattgcaagga 27069317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 398 - 474
Target Start/End: Original strand, 40316977 - 40317053
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| ||||||||| ||||||| |||  ||||||||||| | ||||||||||| || |||| ||||||||||||    
T  40316977 agggacggaattttaaaggattaaactttgaaagggtaattttccaggattaacgattacagaggccaatttttaaa 40317053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 398 - 474
Target Start/End: Original strand, 40327051 - 40327127
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| ||||||||| ||||||| |||  ||||||||||| | ||||||||||| || |||| ||||||||||||    
T  40327051 agggacggaattttaaaggattaaactttgaaagggtaattttccaggattaacgattacagaggccaatttttaaa 40327127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 401 - 489
Target Start/End: Complemental strand, 50750998 - 50750910
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgca 489  Q
    |||||| |||||||||||||||   | ||||| |||||||| ||||||| ||| || || ||| |||||||||||||| ||||||||||    
T  50750998 gacgaatttttaaatgattaaacaatgcaaggttaatttgccaggattagcgattacagggacgaatttttaaacgacgcctaattgca 50750910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 398 - 489
Target Start/End: Complemental strand, 55866223 - 55866134
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgca 489  Q
    |||||| || ||||||||||||| | |||   ||||||||||||||||||||  ||||| | |  |||||||||||||||||||||||||||    
T  55866223 agggaccaatttttaaatgattatactttgagagggtaatttgcaaggattagtgaatacaaa--ccaatttttaaacgacccctaattgca 55866134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 14802051 - 14802150
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||  || ||||| || |||| |||||| |  ||||||||||||||||| | |||||||||||||| ||||    
T  14802051 ggacgaaattttaaatgattaatgattgcaagaatagtttgctagaattagcgaatacaaggaccaatttttaaacgatctctaattgcaaggatgaaat 14802150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 375 - 421
Target Start/End: Original strand, 9145026 - 9145072
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaa 421  Q
    ||||||| |||||||| || |||||||||||||||||||||||||||    
T  9145026 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 9145072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 375 - 421
Target Start/End: Original strand, 42738291 - 42738337
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaa 421  Q
    ||||||| |||||||| || |||||||||||||||||||||||||||    
T  42738291 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 42738337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #104
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 400 - 493
Target Start/End: Complemental strand, 10408001 - 10407908
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||   | ||||||||| |||  ||||||| ||| || || ||  |||||||||| ||| ||||||||||||||    
T  10408001 ggacgaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacagggagtaatttttaaatgactcctaattgcaagga 10407908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #105
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 375 - 492
Target Start/End: Original strand, 34837334 - 34837451
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || |||||||||||||||||||| ||||||   || || || |||  ||| ||||||| | | || |||||| ||||||||||    
T  34837334 cgtggcagtgattaagtggggagagggacgaaattttaaacgattaacaattgcagggttaaaatgccaggattagcaattacagagacgaatttttaaa 34837433  T
Q  475 cgacccctaattgcaagg 492  Q
     | | |||||||||||||    
T  34837434 tgccgcctaattgcaagg 34837451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #106
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 400 - 493
Target Start/End: Original strand, 51859720 - 51859813
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||   ||||||| ||| |||| ||||||| ||| || | |||| ||||||||||  ||  |||||||||||||    
T  51859720 ggacgaaattttaaatgattaaacaatacaaggataaattgccaggattagcgattacaaagactaatttttaaattacgtctaattgcaagga 51859813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #107
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 401 - 493
Target Start/End: Original strand, 39701224 - 39701316
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    ||||||||||||||||||||||   | ||| ||||| |||  | ||||||||| || | |||| |||||||||| ||| ||||||||||||||    
T  39701224 gacgaaattttaaatgattaaacaatgcaaaggtaaattgtcaagattaacgattacatagactaatttttaaatgacgcctaattgcaagga 39701316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #108
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 383 - 491
Target Start/End: Original strand, 54435396 - 54435504
Alignment:
Q  383 tgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccct 482  Q
    |||||||| ||  |||||||||||||||||||| ||||     | ||| | ||||||||||||||| |||| || |  || ||||||||||||||| |||    
T  54435396 tgattaagggggaagagggacgaaattttaaataattatcaaatgcaatgctaatttgcaaggattgacgattacatggatcaatttttaaacgacacct 54435495  T
Q  483 aattgcaag 491  Q
    |||||||||    
T  54435496 aattgcaag 54435504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #109
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 426
Target Start/End: Complemental strand, 48528621 - 48528558
Alignment:
Q  363 gctaatcggtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaatttt 426  Q
    ||||||| |||| ||| || |||||||| || || ||| |||||||||||||||||||||||||    
T  48528621 gctaatcagtgatgtgacagtgattaagtggggataggaacgaaattttaaatgattaaatttt 48528558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #110
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 489
Target Start/End: Original strand, 50751812 - 50751902
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgca 489  Q
    ||||||||| |||||||||||||||   | ||||| |||||||  ||||||| ||| || || ||| |||||||||||||| ||||||||||    
T  50751812 agggacgaatttttaaatgattaaacaatgcaaggttaatttgtcaggattagcgattacag-gacgaatttttaaacgacgcctaattgca 50751902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #111
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 404 - 486
Target Start/End: Original strand, 5818093 - 5818175
Alignment:
Q  404 gaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaatt 486  Q
    |||||||||||||||||||   | ||||||||| |||  ||||||||||| || || ||| |||||||||| ||| |||||||    
T  5818093 gaaattttaaatgattaaacaatgcaagggtaaattgacaggattaacgattacagggactaatttttaaatgacgcctaatt 5818175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #112
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 474
Target Start/End: Complemental strand, 29320180 - 29320067
Alignment:
Q  363 gctaatcggtgacgtggcaatgattaagagg--tgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagaga 460  Q
    ||||||| |||||||| || |||||||  ||  |||||||||| || | | ||||||||||| |||  ||||||||||||  |||||||| || || ||     
T  29320180 gctaatcagtgacgtgacactgattaactgggttgagagggaccaattctaaaatgattaaactttgaaagggtaatttgttaggattaaggattacagg 29320081  T
Q  461 gaccaatttttaaa 474  Q
    ||||||||||||||    
T  29320080 gaccaatttttaaa 29320067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #113
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 375 - 421
Target Start/End: Complemental strand, 32950279 - 32950233
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaa 421  Q
    ||||||| |||||||| || ||||| |||||||||||||||||||||    
T  32950279 cgtggcagtgattaagtggggagagagacgaaattttaaatgattaa 32950233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #114
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 499
Target Start/End: Complemental strand, 1178130 - 1178070
Alignment:
Q  438 ttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||| |||||| |  ||||||||||||||||||| |||||| ||||||| ||||    
T  1178130 ttgcaaggattagcgaatacat-gaccaatttttaaacgacctctaattacaaggatgaaat 1178070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #115
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 493
Target Start/End: Complemental strand, 9400631 - 9400538
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||| |||||||||||||||||   || ||||| ||| |||| ||||||| | | || || ||| |||||||||| ||| ||||||||||||||    
T  9400631 ggaccaaattttaaatgattaacaattgcaaggctaaattgccaggattagcaattacagggacgaatttttaaatgacacctaattgcaagga 9400538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #116
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 486
Target Start/End: Original strand, 22718254 - 22718339
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaatt 486  Q
    ||||||||||||||||||||||   | |||| |||| |||| ||||||||| | || |||||  |||||||||| ||| |||||||    
T  22718254 gacgaaattttaaatgattaaacaatgcaagagtaaattgccaggattaacaattacagagagtaatttttaaatgacgcctaatt 22718339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #117
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 474
Target Start/End: Complemental strand, 22923249 - 22923176
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||||||||||||||||||   | |||| |||| |||  ||||||||||| || |||||| ||||||||||    
T  22923249 gacgaaattttaaatgattaaacaatgcaagagtaaattgtcaggattaacgattacagagactaatttttaaa 22923176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #118
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 474
Target Start/End: Complemental strand, 22927902 - 22927829
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||||||||||||||||||   | |||| |||| |||  ||||||||||| || |||||| ||||||||||    
T  22927902 gacgaaattttaaatgattaaacaatgcaagagtaaattgtcaggattaacgattacagagactaatttttaaa 22927829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #119
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 474
Target Start/End: Complemental strand, 22984181 - 22984108
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||||||||||||||||||   | |||| |||| |||  ||||||||||| || |||||| ||||||||||    
T  22984181 gacgaaattttaaatgattaaacaatgcaagagtaaattgtcaggattaacgattacagagactaatttttaaa 22984108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #120
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 486
Target Start/End: Complemental strand, 22986962 - 22986877
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaatt 486  Q
    ||||||||||||||||||||||   | |||| |||| |||| ||||||||| | || |||||  |||||||||| ||| |||||||    
T  22986962 gacgaaattttaaatgattaaacaatgcaagagtaaattgccaggattaacaattacagagagtaatttttaaatgacgcctaatt 22986877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #121
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 474
Target Start/End: Complemental strand, 22997769 - 22997696
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||||||||||||||||||   | |||| |||| |||  ||||||||||| || |||||| ||||||||||    
T  22997769 gacgaaattttaaatgattaaacaatgcaagagtaaattgtcaggattaacgattacagagactaatttttaaa 22997696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #122
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 429
Target Start/End: Original strand, 23455649 - 23455706
Alignment:
Q  372 tgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttaca 429  Q
    |||||||||| |||||||  ||  ||||||||||||||| |||||||||| |||||||    
T  23455649 tgacgtggcagtgattaatcgggaagagggacgaaatttgaaatgattaatttttaca 23455706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #123
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 493
Target Start/End: Original strand, 27149310 - 27149402
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||   | ||||||||| |||| ||||||| | | || || ||| || ||||||| ||| ||||||||||||||    
T  27149310 ggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcaattacagggactaa-ttttaaatgacgcctaattgcaagga 27149402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #124
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 409 - 497
Target Start/End: Complemental strand, 33247377 - 33247289
Alignment:
Q  409 tttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaa 497  Q
    |||||||||||||   || ||||| ||| |||| ||||||| | | || || ||| |||||||||| ||| ||||||||||||||||||    
T  33247377 tttaaatgattaacaattgcaaggctaaattgccaggattagcaattacagggacgaatttttaaatgacacctaattgcaaggattaa 33247289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #125
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 405 - 493
Target Start/End: Original strand, 45463392 - 45463480
Alignment:
Q  405 aaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    ||||||||||||||||||   | ||||||||  |||| ||||||| | | || || ||| |||||||||| ||| ||||||||||||||    
T  45463392 aaattttaaatgattaaacaatgcaagggtagattgccaggattagcaattacagggactaatttttaaatgacgcctaattgcaagga 45463480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #126
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 400 - 448
Target Start/End: Complemental strand, 51859519 - 51859471
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggatt 448  Q
    ||||||||||||||||||||||||  | ||||||||| |||| ||||||    
T  51859519 ggacgaaattttaaatgattaaataatgcaagggtaaattgccaggatt 51859471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #127
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 397 - 449
Target Start/End: Complemental strand, 56014840 - 56014788
Alignment:
Q  397 gagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggatta 449  Q
    |||||||||||||||||||||||||  ||| || ||| ||||||| |||||||    
T  56014840 gagggacgaaattttaaatgattaacgtttgcaggggcaatttgccaggatta 56014788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 8e-38; HSPs: 97)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 371 - 499
Target Start/End: Complemental strand, 40379910 - 40379782
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||||||||| |||||||| || ||||||||||||||||||||||||||||   ||||| ||||| |||||||||||| |||||| | |||||||||||    
T  40379910 gtgacgtggcattgattaagtggggagagggacgaaattttaaatgattaaacaatacaaaggtaaattgcaaggattagcgaatacaaagaccaatttt 40379811  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||||||| ||||    
T  40379810 taaacgacccctaattgcaaggatgaaat 40379782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 363 - 499
Target Start/End: Original strand, 5457186 - 5457322
Alignment:
Q  363 gctaatcggtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagaga 462  Q
    ||||||| ||||||||||| |||||||  ||   ||||||||||||||||||||||||||  ||  |||||||||||||||||||||||||||| |  ||    
T  5457186 gctaatcagtgacgtggcagtgattaactgggatgagggacgaaattttaaatgattaaacattgaaagggtaatttgcaaggattaacgaatacaagga 5457285  T
Q  463 ccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||||||||||||||| ||||    
T  5457286 ccaatttttaaacgacccctaattgcaaggatgaaat 5457322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 371 - 499
Target Start/End: Original strand, 28469295 - 28469423
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||||||| | |||||||| || ||||||||||||||||||||||||||||   | ||||||||| |||| ||||||||||| || || ||||||||||    
T  28469295 gtgacgtggtagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattaacgattacagggaccaatttt 28469394  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||||||| ||||    
T  28469395 taaacgacccctaattgcaaggatgaaat 28469423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 370 - 499
Target Start/End: Complemental strand, 24388961 - 24388832
Alignment:
Q  370 ggtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaattt 469  Q
    ||||| |||||| |||||||| || ||||||||||||||||||| ||||||||   ||||||||||| |||| | ||||| |||||| ||||||||||||    
T  24388961 ggtgatgtggcagtgattaagtggggagagggacgaaattttaagtgattaaacaatacaagggtaaattgccatgattagcgaatacagagaccaattt 24388862  T
Q  470 ttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||| ||||||||||||| ||||    
T  24388861 ttaaacgacccataattgcaaggatgaaat 24388832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 371 - 499
Target Start/End: Complemental strand, 10935935 - 10935807
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||| ||||| |||||||| || ||||||||||||||||||||||||||||   | ||||||||| |||| ||||||| ||| || || ||||||||||    
T  10935935 gtgacatggcagtgattaagtggagagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagggaccaatttt 10935836  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||||||| ||||    
T  10935835 taaacgacccctaattgcaaggatgaaat 10935807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 373 - 499
Target Start/End: Original strand, 45010893 - 45011019
Alignment:
Q  373 gacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaattttta 472  Q
    ||||||||| |||||||| || ||||| ||||||||||||||||||||||   | ||||||||| |||||||||||| |||||| |   |||||||||||    
T  45010893 gacgtggcagtgattaagtggggagagagacgaaattttaaatgattaaacaatgcaagggtaaattgcaaggattagcgaatacatgaaccaattttta 45010992  T
Q  473 aacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||||| ||||    
T  45010993 aacgacccctaattgcaaggatgaaat 45011019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 375 - 499
Target Start/End: Complemental strand, 6253608 - 6253484
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || ||||||||||||||||||||||||||||   | || |||||| |||| ||||||| ||| || || ||||||||||||||    
T  6253608 cgtggcattgattaagtggagagagggacgaaattttaaatgattaaacaatgcaggggtaaattgccaggattagcgattacagggaccaatttttaaa 6253509  T
Q  475 cgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||| ||||    
T  6253508 cgacccctaattgcaaggatcaaat 6253484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 375 - 499
Target Start/End: Complemental strand, 17102157 - 17102033
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || ||||||||||||||||||||||||||||   | || |||||| |||| ||||||| ||| || || ||||||||||||||    
T  17102157 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaggggtaaattgccaggattagcgattacagggaccaatttttaaa 17102058  T
Q  475 cgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||| ||||    
T  17102057 cgacccctaattgcaaggatcaaat 17102033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 375 - 499
Target Start/End: Complemental strand, 19204626 - 19204502
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    |||||||||||||||| || ||||||||| ||||||||||||||||||   | ||||||||| |||| || |||||||| || || ||||||||||||||    
T  19204626 cgtggcaatgattaagtggggagagggacaaaattttaaatgattaaacaatgcaagggtaaattgccagaattaacgattacagggaccaatttttaaa 19204527  T
Q  475 cgacccctaattgcaaggattaaat 499  Q
    |||||||||||| ||||||| ||||    
T  19204526 cgacccctaatttcaaggatcaaat 19204502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 400 - 499
Target Start/End: Complemental strand, 42362562 - 42362463
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||||||   | ||||||||||||||||||||||||||||| |  |||||||||||||||||| ||||||||||||||| ||||    
T  42362562 ggacgaaattttaaatgattaaagaatgcaagggtaatttgcaaggattaacgaatacaaggaccaatttttaaacgacacctaattgcaaggatgaaat 42362463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 383 - 499
Target Start/End: Complemental strand, 6571142 - 6571026
Alignment:
Q  383 tgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccct 482  Q
    |||||||| || ||||||||| ||||||||||||||||||   | ||||||||| |||  ||||||||||| || || ||||||||||||||||||||||    
T  6571142 tgattaagtggggagagggacaaaattttaaatgattaaacaatgcaagggtaaattgtcaggattaacgattacagggaccaatttttaaacgacccct 6571043  T
Q  483 aattgcaaggattaaat 499  Q
    |||||||||||| ||||    
T  6571042 aattgcaaggatcaaat 6571026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 375 - 499
Target Start/End: Original strand, 32298996 - 32299120
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || ||||||||||||||||| ||||||||||   | ||||||||| |||| ||||||| ||| || || ||||||||||||||    
T  32298996 cgtggcagtgattaagtggggagagggacgaaattttcaatgattaaacaatgcaagggtaaattgccaggattagcgattacagggaccaatttttaaa 32299095  T
Q  475 cgacccctaattgcaaggattaaat 499  Q
    |||| ||||||||||||||| ||||    
T  32299096 cgactcctaattgcaaggatcaaat 32299120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 372 - 499
Target Start/End: Original strand, 17886778 - 17886905
Alignment:
Q  372 tgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaattttt 471  Q
    |||||||||| |||||||| ||    ||||||||||||||||||||||||  ||| |||||||| |||||||||||||||||||| |  || ||||||||    
T  17886778 tgacgtggcagtgattaagtgggtcaagggacgaaattttaaatgattaatatttgcaagggtagtttgcaaggattaacgaatacatggatcaattttt 17886877  T
Q  472 aaacgacccctaattgcaaggattaaat 499  Q
    ||| || |||||||||||||||| ||||    
T  17886878 aaatgatccctaattgcaaggatgaaat 17886905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 398 - 489
Target Start/End: Original strand, 18855968 - 18856059
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgca 489  Q
    ||||||||||||||||||||||||| ||| |||||||||||||| | ||||||||| || || |||||||||||||| ||||||||||||||    
T  18855968 agggacgaaattttaaatgattaaactttgcaagggtaatttgccaagattaacgattacagggaccaatttttaaatgacccctaattgca 18856059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 371 - 494
Target Start/End: Complemental strand, 42731560 - 42731437
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||| ||||| |||||||| || ||||||||||||||||||||||||||||   | || |||||| |||| ||||||| ||| || |  ||||||||||    
T  42731560 gtgacatggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaggggtaaattgccaggattagcgattacaaggaccaatttt 42731461  T
Q  471 taaacgacccctaattgcaaggat 494  Q
    ||||||||||||||||||||||||    
T  42731460 taaacgacccctaattgcaaggat 42731437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 405 - 499
Target Start/End: Original strand, 13386068 - 13386162
Alignment:
Q  405 aaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||  || ||||| || ||||||||||||| |||||| || ||||||||||||||||||||||||||||||| |||||||    
T  13386068 aaattttaaatgattaaacattgcaaggctagtttgcaaggattagcgaatatagggaccaatttttaaacgacccctaattgcaagtattaaat 13386162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 377 - 499
Target Start/End: Original strand, 22871570 - 22871692
Alignment:
Q  377 tggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacg 476  Q
    ||||| |||||||| || |||||||| |||||||||||||||||||   | ||||||||| |||||||||||| | | || || |||||||||||||| |    
T  22871570 tggcagtgattaagtggggagagggaagaaattttaaatgattaaacaatgcaagggtaaattgcaaggattagctattacagggaccaatttttaaatg 22871669  T
Q  477 acccctaattgcaaggattaaat 499  Q
    |||||||||||||||||| ||||    
T  22871670 acccctaattgcaaggatcaaat 22871692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 398 - 499
Target Start/End: Original strand, 18670177 - 18670278
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaa 497  Q
    |||||| ||||||||| |||||||| |||   |||| || ||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||    
T  18670177 agggaccaaattttaagtgattaaactttgggagggcaaattgcaaggattaacgaatacagggaccattttttaaacgacccctaattgcaaggattaa 18670276  T
Q  498 at 499  Q
    ||    
T  18670277 at 18670278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 375 - 499
Target Start/End: Complemental strand, 27991876 - 27991752
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || ||||||||||||||||||||||||||||   | || |||||| |||| ||||||| ||| || || || |||||| ||||    
T  27991876 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaggggtaaattgccaggattagcgattacagggatcaatttctaaa 27991777  T
Q  475 cgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||| ||||    
T  27991776 cgacccctaattgcaaggatcaaat 27991752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 372 - 499
Target Start/End: Original strand, 27396883 - 27397010
Alignment:
Q  372 tgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaattttt 471  Q
    |||||||||| |||||||| || ||||||||||||||||||||||||||||   | ||  ||| | |||  ||||||| ||| || || |||||||||||    
T  27396883 tgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcagtggtgaattgtcaggattagcgattacagggaccaattttt 27396982  T
Q  472 aaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||| ||||    
T  27396983 aaacgacccctaattgcaaggatgaaat 27397010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 27992024 - 27992123
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||| |||||||||||||||||   || ||||| || ||||||||||||| |||||| || |||||||||||||||||||||||||||||||||| ||||    
T  27992024 ggactaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattgcaaggatcaaat 27992123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 371 - 499
Target Start/End: Original strand, 10936081 - 10936209
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    |||||| |||||||||||||  ||   | ||||||||||||||||||||||   || ||||| || ||||||||||||| |||||| |  ||||||||||    
T  10936081 gtgacgcggcaatgattaagttgtccaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacaaggaccaatttt 10936180  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    ||||| |||||||||||||||||| ||||    
T  10936181 taaacaacccctaattgcaaggatgaaat 10936209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 363 - 499
Target Start/End: Original strand, 20426609 - 20426745
Alignment:
Q  363 gctaatcggtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagaga 462  Q
    ||||||||||||||||||| || || || ||   ||||||| |||||||||||||||||| |||   |||||||  ||| ||||||| |||||| || ||    
T  20426609 gctaatcggtgacgtggcagtggtttagtgggatgagggactaaattttaaatgattaaactttgtgagggtaaaatgccaggattagcgaatacaggga 20426708  T
Q  463 ccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||| ||||||||| |||| ||||    
T  20426709 ccaatttttaaacgacctctaattgcagggatgaaat 20426745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 400 - 499
Target Start/End: Complemental strand, 2640290 - 2640191
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||  |||||||||||||||| |||||| ||  |||||||||||||||||||||||||| |||||| ||||    
T  2640290 ggacgaaattttaaatgattaatgattgcaagactaatttgcaaggattagcgaatacaggtaccaatttttaaacgacccctaattgtaaggatgaaat 2640191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 400 - 491
Target Start/End: Complemental strand, 17885740 - 17885649
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaag 491  Q
    ||||||||||||||||||||||   || ||||| || |||||||||||||  ||||| || |||||||||||||||||||||||||||||||    
T  17885740 ggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagagaatacagggaccaatttttaaacgacccctaattgcaag 17885649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 400 - 499
Target Start/End: Complemental strand, 28469122 - 28469023
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||| || ||||||| ||||| |||||| |  |||||||||||||||||||||||||||||||||| ||||    
T  28469122 ggacgaaattttaaatgattaatgattgcaaggctagtttgcaaagattagcgaatataaggaccaatttttaaacgacccctaattgcaaggatgaaat 28469023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 404 - 491
Target Start/End: Complemental strand, 48788911 - 48788824
Alignment:
Q  404 gaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaag 491  Q
    ||||||||||||||||||   || ||||| || ||||||||||||| |||||| || |||||||||||||||||||||||||||||||    
T  48788911 gaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattgcaag 48788824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 405 - 499
Target Start/End: Original strand, 30128668 - 30128762
Alignment:
Q  405 aaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||| |||||||| |||   ||||||| ||||||| ||||||||||| || ||||| |||||||||||||| ||||||||||||||||||    
T  30128668 aaattttaagtgattaaactttgggagggtaaattgcaagaattaacgaatatagggaccattttttaaacgacccttaattgcaaggattaaat 30128762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 402 - 499
Target Start/End: Complemental strand, 42019707 - 42019610
Alignment:
Q  402 acgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||   |||||| | || ||||||||||||| |||||| |  |||||||||||||||||||| ||||||||||||| ||||    
T  42019707 acgaaattttaaatgattaatgattacaaagctagtttgcaaggattagcgaatacatggaccaatttttaaacgacccttaattgcaaggatgaaat 42019610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 383 - 499
Target Start/End: Original strand, 2640477 - 2640593
Alignment:
Q  383 tgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccct 482  Q
    |||||||| || ||||| ||||||||||||||||||||||   | ||||||||| |||| || |||| ||| || |||| ||||||||||||||||||||    
T  2640477 tgattaagtggggagagagacgaaattttaaatgattaaacaatgcaagggtaaattgccagaattagcgattacagaggccaatttttaaacgacccct 2640576  T
Q  483 aattgcaaggattaaat 499  Q
    ||||  |||||| ||||    
T  2640577 aattataaggatgaaat 2640593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 398 - 498
Target Start/End: Complemental strand, 18086403 - 18086303
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaa 497  Q
    |||||||||||||||| |||||||   || ||||| |||||||||||||||| ||  || || |||||||||||||||||| |||||||||||||| |||    
T  18086403 agggacgaaattttaagtgattaataattgcaaggctaatttgcaaggattatcgtttacagggaccaatttttaaacgactcctaattgcaaggactaa 18086304  T
Q  498 a 498  Q
    |    
T  18086303 a 18086303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 398 - 498
Target Start/End: Original strand, 18087652 - 18087752
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaa 497  Q
    |||||| |||||||||||||||||   || ||||| || ||||||||||||| ||| || || |||||||||||||| |||||||||||||||||| |||    
T  18087652 agggacaaaattttaaatgattaataattgcaaggctattttgcaaggattagcgattacagtgaccaatttttaaatgacccctaattgcaaggactaa 18087751  T
Q  498 a 498  Q
    |    
T  18087752 a 18087752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 383 - 499
Target Start/End: Original strand, 23181293 - 23181409
Alignment:
Q  383 tgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccct 482  Q
    |||||||| || ||||||||||||||||||||||||||||   | ||||||||| |||| | ||||| ||| || |  ||||||| ||||||||||||||    
T  23181293 tgattaagtggagagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccaagattagcgattacatggaccaatatttaaacgacccct 23181392  T
Q  483 aattgcaaggattaaat 499  Q
    |||||||| ||| ||||    
T  23181393 aattgcaatgatgaaat 23181409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 371 - 487
Target Start/End: Original strand, 32053430 - 32053546
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    |||||||| || |||||||| || ||||||||||||||||||||||||||||   | ||| | ||| |||| ||||||||||| || ||  |||||||||    
T  32053430 gtgacgtgacagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaatgataaattgctaggattaacgattataggaaccaatttt 32053529  T
Q  471 taaacgacccctaattg 487  Q
    ||||||| |||||||||    
T  32053530 taaacgatccctaattg 32053546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 383 - 499
Target Start/End: Complemental strand, 37656981 - 37656865
Alignment:
Q  383 tgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccct 482  Q
    |||||||| || ||||||||||||||||||||| | ||||   | |||| |||| |||| ||||||| ||| || ||||||||||||||||||||  |||    
T  37656981 tgattaagtggggagagggacgaaattttaaataaataaacaatgcaagcgtaaattgcgaggattagcgattacagagaccaatttttaaacgattcct 37656882  T
Q  483 aattgcaaggattaaat 499  Q
    |||||||||||| ||||    
T  37656881 aattgcaaggatgaaat 37656865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 17102305 - 17102404
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||| |||||||||||||||||   || ||||| || ||||| ||||||| |||||| |  |||||||||||||||||||||||||||||||||| ||||    
T  17102305 ggactaaattttaaatgattaatgattgcaaggctagtttgctaggattagcgaatacatggaccaatttttaaacgacccctaattgcaaggatcaaat 17102404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 24389101 - 24389200
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||| |||||||||||||||||   || ||| | || ||||||||||||| |||||| |  |||||||||||||||||||||||||||||||||| ||||    
T  24389101 ggacaaaattttaaatgattaatgattgcaatgctagtttgcaaggattagcgaatacatggaccaatttttaaacgacccctaattgcaaggatgaaat 24389200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 402 - 493
Target Start/End: Complemental strand, 32687507 - 32687416
Alignment:
Q  402 acgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    ||||||||||||||||||||  ||| |||||| ||||||| ||||||||||| || || |||||| ||||||| ||||||||||| ||||||    
T  32687507 acgaaattttaaatgattaatatttgcaagggcaatttgccaggattaacgattacagggaccaaattttaaatgacccctaattacaagga 32687416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 400 - 491
Target Start/End: Complemental strand, 33808435 - 33808344
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaag 491  Q
    |||||||||||||||||||||||   | ||||  |||||||||||||||| |||||| ||||||||||||||||||||| | ||||| ||||    
T  33808435 ggacgaaattttaaatgattaaagaatgcaagactaatttgcaaggattagcgaatacagagaccaatttttaaacgacgcgtaatttcaag 33808344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 40380000 - 40380099
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||| || ||||||||||||  |||||| |  |||||||||||||||||| ||||||||||||||| ||||    
T  40380000 ggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattggcgaatacatggaccaatttttaaacgactcctaattgcaaggatgaaat 40380099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 375 - 493
Target Start/End: Original strand, 32680855 - 32680973
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || |||||||||||||||||||||||||||   || ||||| ||| |||| ||||||| | | || |  ||| ||||||||||    
T  32680855 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaacaattgcaaggctaaattgccaggattagcaattacatggacgaatttttaaa 32680954  T
Q  475 cgacccctaattgcaagga 493  Q
    |||| ||||||||||||||    
T  32680955 cgacgcctaattgcaagga 32680973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 398 - 494
Target Start/End: Complemental strand, 13384616 - 13384520
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggat 494  Q
    ||||||||||||||||||||||||  ||| |||||||| ||||| ||||||| ||| || || |||||| |||||| |||||| |||||||| ||||    
T  13384616 agggacgaaattttaaatgattaacgtttgcaagggtagtttgctaggattagcgattacagggaccaaattttaagcgacccttaattgcagggat 13384520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 398 - 485
Target Start/End: Complemental strand, 5455941 - 5455854
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaat 485  Q
    ||||| ||||||||||||||||||| |||  ||||  ||| |||||||||||  ||||| || |||||||||||||||||||||||||    
T  5455941 agggatgaaattttaaatgattaaactttgaaaggacaatatgcaaggattagagaatacagggaccaatttttaaacgacccctaat 5455854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 6253756 - 6253855
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||| |||||||||||||||||   || ||||  |  ||||||||||||| |||||| |  |||||||||||||||||||||||||||||||||| ||||    
T  6253756 ggactaaattttaaatgattaatgattgcaagacttgtttgcaaggattagcgaatacaaggaccaatttttaaacgacccctaattgcaaggatcaaat 6253855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 406 - 493
Target Start/End: Original strand, 16803967 - 16804054
Alignment:
Q  406 aattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||   | ||||||||| |||| ||||||  ||| || || |||||||||||||||||||||||||||||||||    
T  16803967 aattttaaatgattaaacaatgcaagggtaaattgctaggattggcgattacagggaccaatttttaaacgacccctaattgcaagga 16804054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 398 - 489
Target Start/End: Complemental strand, 43123289 - 43123198
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgca 489  Q
    |||||| || ||||||||||||| | |||   |||||| |||||||||||||  ||||| || |||||||||||||||||||||||||||||    
T  43123289 agggactaatttttaaatgattatactttgagagggtagtttgcaaggattagtgaatacagggaccaatttttaaacgacccctaattgca 43123198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 437 - 499
Target Start/End: Complemental strand, 32298852 - 32298790
Alignment:
Q  437 tttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||| |||||| || ||||| |||||||||||||||||||||||||||| ||||    
T  32298852 tttgcaaggattagcgaatacagggaccagtttttaaacgacccctaattgcaaggatcaaat 32298790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 398 - 492
Target Start/End: Original strand, 32688532 - 32688626
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagg 492  Q
    ||||||||||||||||||||||||  ||| |||||| ||||||  ||||||| ||| || |  |||||| ||||||| |||||||||||||||||    
T  32688532 agggacgaaattttaaatgattaatatttgcaagggcaatttgtcaggattagcgattacaaggaccaaattttaaatgacccctaattgcaagg 32688626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 400 - 493
Target Start/End: Complemental strand, 25453240 - 25453147
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    ||||||||||||||||||||||||  | ||||||||| |||  ||||||| ||| || || ||| |||||||||| ||| ||||||||||||||    
T  25453240 ggacgaaattttaaatgattaaataatgcaagggtaaattgtcaggattagcgattatagggactaatttttaaatgacgcctaattgcaagga 25453147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 438 - 499
Target Start/End: Original strand, 37657191 - 37657252
Alignment:
Q  438 ttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||| || || |||||||||||||| |||||||||||||||| ||||    
T  37657191 ttgcaaggattaacgaatacagggatcaatttttaaacgatccctaattgcaaggatgaaat 37657252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 398 - 491
Target Start/End: Original strand, 42363700 - 42363792
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaag 491  Q
    |||||||||||||| | | |||||| ||| ||||| |||||||||| |||||||||||| || ||||||||||||||||||  | |||||||||    
T  42363700 agggacgaaattttgagttattaaaatttgcaaggataatttgcaaagattaacgaatacag-gaccaatttttaaacgacgtcaaattgcaag 42363792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 401 - 493
Target Start/End: Original strand, 33828289 - 33828381
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    ||||||||||||||||||||||   | ||||||||| |||  ||||||| ||| || |||||| |||||||||| ||| ||||||||||||||    
T  33828289 gacgaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacagagactaatttttaaatgacacctaattgcaagga 33828381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 371 - 499
Target Start/End: Original strand, 42019884 - 42020012
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||| ||||| |||||||| |  ||||| ||||||||||||||| ||||||   | |||| |||| |||| | ||||| ||| || ||  |||||||||    
T  42019884 gtgacatggcagtgattaagtgaggagagagacgaaattttaaataattaaacaatgcaagagtaaattgccaagattagcgattataggaaccaatttt 42019983  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    ||||| |||||||||||||||||| ||||    
T  42019984 taaacaacccctaattgcaaggatgaaat 42020012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 372 - 480
Target Start/End: Original strand, 43124440 - 43124548
Alignment:
Q  372 tgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaattttt 471  Q
    |||||||||| |||||||  ||  | |||||||||||||||||||||||||   | |||||||| |||| |||||||| ||| || || |||||||||||    
T  43124440 tgacgtggcagtgattaactgggaatagggacgaaattttaaatgattaaacaatgcaagggtagtttgtaaggattagcgattacagggaccaattttt 43124539  T
Q  472 aaacgaccc 480  Q
    ||| |||||    
T  43124540 aaatgaccc 43124548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 374 - 489
Target Start/End: Complemental strand, 7355000 - 7354885
Alignment:
Q  374 acgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaa 473  Q
    |||||||||| |||||| || | ||||||| |||||||||||||||||||  |  | ||| ||  ||| | |||||||||||| || |||||||||||||    
T  7355000 acgtggcaataattaagtggggggagggaccaaattttaaatgattaaatagtttaggggcaaaatgccacgattaacgaatatagggaccaatttttaa 7354901  T
Q  474 acgacccctaattgca 489  Q
    | |||||||| |||||    
T  7354900 atgacccctatttgca 7354885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 404 - 499
Target Start/End: Complemental strand, 27396737 - 27396642
Alignment:
Q  404 gaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||   || ||||  || ||||||||||||| |||||| |  |||||||||||||||| ||||||||| ||||||| ||||    
T  27396737 gaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgaatacatggaccaatttttaaacggcccctaattacaaggatgaaat 27396642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 404 - 499
Target Start/End: Complemental strand, 32053251 - 32053156
Alignment:
Q  404 gaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||   || ||||| || ||||||||||||| || ||| || |||| ||||||||||||||| ||||| ||||||| ||||    
T  32053251 gaaattttaaatgattaatgattgcaaggctagtttgcaaggattatcgtatatagggaccgatttttaaacgacccataattacaaggatgaaat 32053156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 42731735 - 42731834
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||| | ||  |||||||||||| || ||| || || ||||||||||||||||||||||| ||||||| ||||    
T  42731735 ggacgaaattttaaatgattaataattgcaaagctagcttgcaaggattagcggatatagggatcaatttttaaacgacccctaattacaaggatgaaat 42731834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 404 - 494
Target Start/End: Original strand, 22828138 - 22828228
Alignment:
Q  404 gaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggat 494  Q
    ||||||||||||||||||  ||| || ||||||||||  | ||||||||| || |  |||||||||||||| ||||||||||| |||||||    
T  22828138 gaaattttaaatgattaaggtttgcaggggtaatttgtcaagattaacgattacaaggaccaatttttaaatgacccctaattacaaggat 22828228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 400 - 494
Target Start/End: Complemental strand, 32934460 - 32934366
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggat 494  Q
    |||||||||||||||||||||||   | ||||||||| |||  ||||||| ||| || || ||| |||||||||| ||| |||||||||||||||    
T  32934460 ggacgaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacagcgactaatttttaaatgacacctaattgcaaggat 32934366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 404 - 489
Target Start/End: Original strand, 3914458 - 3914542
Alignment:
Q  404 gaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgca 489  Q
    ||||||||||||||||||   || ||||| || ||||||||||||| |||||| || |||||| |||||||||||| |||||||||    
T  3914458 gaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagggaccaa-ttttaaacgacctctaattgca 3914542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 400 - 493
Target Start/End: Complemental strand, 42618023 - 42617930
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||   | ||||||||| |||  ||||||| ||| || || ||| |||||||||| ||| ||||||||||||||    
T  42618023 ggacgaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattaaagggactaatttttaaatgacgcctaattgcaagga 42617930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 400 - 493
Target Start/End: Original strand, 42618225 - 42618318
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||   | ||||||||| |||| ||||||| ||| || ||  || |||||||||| ||| ||||||||||||||    
T  42618225 ggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacaggaactaatttttaaatgacgcctaattgcaagga 42618318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 363 - 436
Target Start/End: Original strand, 45915759 - 45915832
Alignment:
Q  363 gctaatcggtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaa 436  Q
    ||||||| ||||||||||| |||||||  ||  ||||||||| |||||||||||||||| ||||||| ||||||    
T  45915759 gctaatcagtgacgtggcagtgattaatcggaaagagggacggaattttaaatgattaatttttacaggggtaa 45915832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 401 - 493
Target Start/End: Original strand, 22081874 - 22081966
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    ||||||||||||||||||||||   | ||||||||| |||| ||||||| ||| || ||| || |||||||||| ||| | ||||||||||||    
T  22081874 gacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagaaactaatttttaaatgacgcataattgcaagga 22081966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 400 - 491
Target Start/End: Complemental strand, 25628590 - 25628499
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaag 491  Q
    |||||||||||||||||||||||   | ||||||||| |||| ||||||| ||| || |  ||| |||||||||| ||| ||||||||||||    
T  25628590 ggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattatcgattacaatgactaatttttaaatgacgcctaattgcaag 25628499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 489
Target Start/End: Original strand, 29144302 - 29144387
Alignment:
Q  404 gaaattttaaatgattaaattttacaagggtaatttgcaaggattaa-cgaatagagagaccaatttttaaacgacccctaattgca 489  Q
    |||||||||||||||||||   | ||| ||||| ||||||||||||| ||| || |  |||||||||||||||||||||||||||||    
T  29144302 gaaattttaaatgattaaacaatgcaaaggtaagttgcaaggattaaacgattatat-gaccaatttttaaacgacccctaattgca 29144387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 375 - 421
Target Start/End: Original strand, 30948420 - 30948466
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaa 421  Q
    ||||||| |||||||| || |||||||||||||||||||||||||||    
T  30948420 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 30948466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 499
Target Start/End: Complemental strand, 47945468 - 47945370
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||||   || ||| | || ||||||||||||| |||||| |   |||||||||||||||| ||| |||||||| ||| ||||    
T  47945468 gacgaaattttaaatgattaatgattgcaatgctagtttgcaaggattagcgaatacatgaaccaatttttaaacgatccccaattgcaacgatgaaat 47945370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 499
Target Start/End: Complemental strand, 47950898 - 47950800
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||||   || ||| | || ||||||||||||| |||||| |   |||||||||||||||| ||| |||||||| ||| ||||    
T  47950898 gacgaaattttaaatgattaatgattgcaatgctagtttgcaaggattagcgaatacatgaaccaatttttaaacgatccccaattgcaacgatgaaat 47950800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 372 - 429
Target Start/End: Original strand, 12644093 - 12644150
Alignment:
Q  372 tgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttaca 429  Q
    |||||||||| |||||||  ||  |||||||||||||||||||||||||| |||||||    
T  12644093 tgacgtggcagtgattaaccgggaagagggacgaaattttaaatgattaatttttaca 12644150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 397 - 494
Target Start/End: Complemental strand, 20425593 - 20425496
Alignment:
Q  397 gagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggat 494  Q
    ||||||||||||||||| ||||||||||||   |||||| ||||| | ||||| ||| || |   ||||||||||||| || ||||||||||| ||||    
T  20425593 gagggacgaaattttaagtgattaaattttgagagggtagtttgccaagattatcgattacatgaaccaatttttaaatgatccctaattgcagggat 20425496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 400 - 493
Target Start/End: Complemental strand, 22081671 - 22081579
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||   | ||||||||| |||| || |||| ||| ||||| ||| |||||||||| ||| | ||||||||||||    
T  22081671 ggacgaaattttaaatgattaaacaatgcaagggtaaattgccagcattagcgattagag-gactaatttttaaatgacgcataattgcaagga 22081579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 400 - 493
Target Start/End: Original strand, 25628792 - 25628885
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||   | ||||||||| |||  ||||||| ||| || | |||| |||||||||| ||| | ||||||||||||    
T  25628792 ggacgaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacatagactaatttttaaatgacgcataattgcaagga 25628885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 404 - 493
Target Start/End: Complemental strand, 43266374 - 43266285
Alignment:
Q  404 gaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||   | ||||||||| |||  ||||||||||| || |  ||| |||||||||| ||| ||||||||||||||    
T  43266374 gaaattttaaatgattaaacaatgcaagggtaaattgtcaggattaacgattacatggactaatttttaaatgacgcctaattgcaagga 43266285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 372 - 429
Target Start/End: Complemental strand, 45914664 - 45914607
Alignment:
Q  372 tgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttaca 429  Q
    |||||||||| |||||||  ||  |||||||||||||||||||||||||| |||||||    
T  45914664 tgacgtggcagtgattaatcgggaagagggacgaaattttaaatgattaatttttaca 45914607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 376 - 456
Target Start/End: Original strand, 13311325 - 13311405
Alignment:
Q  376 gtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaata 456  Q
    |||||| ||||||||  | ||||||||||||||||||||| ||||||||||  ||||| || |||  | ||||||||||||    
T  13311325 gtggcagtgattaagtcgggagagggacgaaattttaaattattaaattttggaagggcaaattgttaagattaacgaata 13311405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 401 - 493
Target Start/End: Complemental strand, 28890690 - 28890598
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    ||||||||||||||||||||||   | ||||||||| |||| ||||||| ||| || |  ||| |||||||||| |||  |||||||||||||    
T  28890690 gacgaaattttaaatgattaaacaatgcaagggtaaattgctaggattagcgattacaaggactaatttttaaatgacgtctaattgcaagga 28890598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 401 - 493
Target Start/End: Original strand, 32068411 - 32068503
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    ||||||||||||||||||||||   | ||||||||| |||  ||||||| ||| || || ||  |||||||||| ||| ||||||||||||||    
T  32068411 gacgaaattttaaatgattaaacaatgcaagggtaaattggcaggattagcgattacagggattaatttttaaatgactcctaattgcaagga 32068503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 489
Target Start/End: Complemental strand, 18855524 - 18855433
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgca 489  Q
    |||||||||||||||| ||||||| ||||  |||||||  ||   ||||||||||| || || ||||| |||||||| |||||||| |||||    
T  18855524 agggacgaaattttaattgattaacttttgaaagggtagatttttaggattaacgattatagggaccattttttaaatgacccctatttgca 18855433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 493
Target Start/End: Complemental strand, 32068206 - 32068115
Alignment:
Q  402 acgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||   | ||||||||| |||| ||||||| ||| || |  ||| |||||||||| |||  |||||||||||||    
T  32068206 acgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacaaggactaatttttaaatgacgtctaattgcaagga 32068115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 422
Target Start/End: Complemental strand, 45010739 - 45010688
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaa 422  Q
    ||||| ||||| |||||||| || |||| |||||||||||||||||||||||    
T  45010739 gtgacttggcagtgattaagtggggagatggacgaaattttaaatgattaaa 45010688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 491
Target Start/End: Original strand, 46205623 - 46205714
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaag 491  Q
    |||||||||||||||||||||||   | |||||||||||||  ||||||||||| || ||  |||||| |||||| || |  ||||||||||    
T  46205623 ggacgaaattttaaatgattaaacaatgcaagggtaatttgtcaggattaacgattacaggaaccaatctttaaatgatcattaattgcaag 46205714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 441 - 499
Target Start/End: Complemental strand, 28105572 - 28105514
Alignment:
Q  441 caaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||  ||||| || ||| |||||||||||||||| ||||||||||||| ||||    
T  28105572 caaggattagtgaatacagggacaaatttttaaacgacccttaattgcaaggatgaaat 28105514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 375 - 421
Target Start/End: Original strand, 34928910 - 34928956
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaa 421  Q
    ||||||| |||||||| || |||||||||||||||||||| ||||||    
T  34928910 cgtggcagtgattaagtggggagagggacgaaattttaaacgattaa 34928956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 429
Target Start/End: Complemental strand, 38643691 - 38643633
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttaca 429  Q
    |||||||| || | |||||| || |||||||||||||| |||||||||||| |||||||    
T  38643691 gtgacgtgacagtaattaagtggggagagggacgaaatcttaaatgattaatttttaca 38643633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 372 - 493
Target Start/End: Complemental strand, 39275011 - 39274889
Alignment:
Q  372 tgacgtggcaatgattaaga-ggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    |||||||||| ||||||||  ||| | | |||||||||||||||||||||||   | ||| ||||| || | ||||||| ||| || |||||| ||||||    
T  39275011 tgacgtggcagtgattaagttggtcaaaaggacgaaattttaaatgattaaacaatgcaaaggtaaattactaggattagcgattacagagactaatttt 39274912  T
Q  471 taaacgacccctaattgcaagga 493  Q
    ||||  || || |||||||||||    
T  39274911 taaataacgccaaattgcaagga 39274889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 375 - 421
Target Start/End: Original strand, 39686794 - 39686840
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaa 421  Q
    ||||||| |||||||| || |||||||||||||||||||| ||||||    
T  39686794 cgtggcagtgattaagtggggagagggacgaaattttaaacgattaa 39686840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 453
Target Start/End: Original strand, 48789090 - 48789172
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacga 453  Q
    ||||| || ||||||| ||| || |||||||| |||||||||||||||||||   | ||||||||| |||| || ||||||||    
T  48789090 gtgacatgacaatgatcaagtggggagagggatgaaattttaaatgattaaacaatgcaagggtaaattgccagaattaacga 48789172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 429
Target Start/End: Complemental strand, 4226265 - 4226208
Alignment:
Q  372 tgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttaca 429  Q
    |||||||||| |||||||  ||  ||| |||||||||||||||||||||| |||||||    
T  4226265 tgacgtggcagtgattaaccgggaagaaggacgaaattttaaatgattaatttttaca 4226208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 432
Target Start/End: Original strand, 38644631 - 38644680
Alignment:
Q  383 tgattaagaggtgagagggacgaaattttaaatgattaaattttacaagg 432  Q
    |||||||| || |||||||| ||||| |||||||||||| ||||||||||    
T  38644631 tgattaagtggggagagggatgaaatcttaaatgattaatttttacaagg 38644680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 493
Target Start/End: Original strand, 43266580 - 43266673
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||   | ||||||||| |||  || |||| ||| || |  ||| |||||||||| ||| ||||||||||||||    
T  43266580 ggacgaaattttaaatgattaaacaatgcaagggtaaattgtcagaattagcgattacatggactaatttttaaatgacgcctaattgcaagga 43266673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 493
Target Start/End: Complemental strand, 46204533 - 46204440
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    ||||||||||||||||||| ||||  | ||| ||||| |||  ||| ||| ||| || || ||| |||||||||| ||| ||||||||||||||    
T  46204533 ggacgaaattttaaatgataaaataatgcaatggtaaattgtcaggtttagcgattacagggactaatttttaaatgacgcctaattgcaagga 46204440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 499
Target Start/End: Original strand, 47946792 - 47946889
Alignment:
Q  402 acgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||| |||||   || ||||  ||||||| ||||  || |||||| ||||||| ||||||||||||  ||||||| ||||||| ||||    
T  47946792 acgaaattttaaataattaatgattgcaagactaatttggaagggatagcgaatacagagaccgatttttaaacgattcctaattacaaggataaaat 47946889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 499
Target Start/End: Original strand, 47952222 - 47952319
Alignment:
Q  402 acgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||| |||||   || ||||  ||||||| ||||  || |||||| ||||||| ||||||||||||  ||||||| ||||||| ||||    
T  47952222 acgaaattttaaataattaatgattgcaagactaatttggaagggatagcgaatacagagaccgatttttaaacgattcctaattacaaggataaaat 47952319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #96
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 372 - 436
Target Start/End: Complemental strand, 12643240 - 12643176
Alignment:
Q  372 tgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaa 436  Q
    |||||||||| |||||||  ||  ||||||||||||||||||||| |||| |||| || ||||||    
T  12643240 tgacgtggcagtgattaatcgggaagagggacgaaattttaaatggttaatttttgcaggggtaa 12643176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #97
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 401 - 493
Target Start/End: Original strand, 23058744 - 23058836
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    ||||||||||||||||||||||   | | ||||||| |||| ||||||||||| || |  ||  |||||||||| ||| || |||||||||||    
T  23058744 gacgaaattttaaatgattaaacaatgcgagggtaaattgccaggattaacgattacaaggattaatttttaaatgacgccgaattgcaagga 23058836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 1e-36; HSPs: 61)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 365 - 499
Target Start/End: Complemental strand, 26463326 - 26463192
Alignment:
Q  365 taatcggtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagacc 464  Q
    ||||| ||||||||||| |||||||  ||   |||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||| || ||||    
T  26463326 taatcagtgacgtggcagtgattaactgggatgagggacgaaattttaaatgattaaactttgcaagggtaatttgccaggattaacgaatacagggacc 26463227  T
Q  465 aatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||||| |||| ||||    
T  26463226 aatttttaaacgacccctaattgcagggatcaaat 26463192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 398 - 494
Target Start/End: Original strand, 8090241 - 8090337
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggat 494  Q
    |||||| |||||||||||||||||| ||| ||||||||||||||||||||||  ||||| |  ||||||||||||||||||||||||||||||||||    
T  8090241 agggaccaaattttaaatgattaaactttgcaagggtaatttgcaaggattagtgaatacaaggaccaatttttaaacgacccctaattgcaaggat 8090337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 375 - 499
Target Start/End: Complemental strand, 30337586 - 30337462
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || |||||||||||||||||||||||||||    | ||||||||| |||| ||||||| ||| || || ||||||||||||||    
T  30337586 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaccaatgcaagggtaaattgccaggattagcgattacagggaccaatttttaaa 30337487  T
Q  475 cgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||| ||||    
T  30337486 cgacccctaattgcaaggatcaaat 30337462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 681044 - 681143
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||| || ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  681044 ggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagagaccaatttttaaacgacccctaattgcaaggatcaaat 681143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 398 - 489
Target Start/End: Complemental strand, 8089557 - 8089466
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgca 489  Q
    |||||||||||||||||||||||||   | |||||||||||||||||||||||||| || || |||||||||||||||||||||||||||||    
T  8089557 agggacgaaattttaaatgattaaacaatgcaagggtaatttgcaaggattaacgattatagggaccaatttttaaacgacccctaattgca 8089466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 371 - 499
Target Start/End: Original strand, 21628000 - 21628128
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||||||||| |||||||| || ||||||||| ||||||||||||||||||   | ||||||||| |||  ||||||| ||| || || ||||||||||    
T  21628000 gtgacgtggcagtgattaagtggggagagggacaaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacagggaccaatttt 21628099  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    ||| |||||||||||||||||||| ||||    
T  21628100 taagcgacccctaattgcaaggatgaaat 21628128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 371 - 499
Target Start/End: Complemental strand, 33517675 - 33517547
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||||| ||| |||||||| || ||||||||||||||||||||||||||||   | ||||||||| |||| ||||||| ||| || || ||||||||||    
T  33517675 gtgacgtagcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagggaccaatttt 33517576  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    ||||||| |||||||| ||||||| ||||    
T  33517575 taaacgatccctaattacaaggatgaaat 33517547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 400 - 499
Target Start/End: Complemental strand, 679978 - 679879
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||| || ||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||| ||||    
T  679978 ggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagagaccaatttttaaacgacccttaattgcaaggatcaaat 679879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 400 - 499
Target Start/End: Complemental strand, 15115451 - 15115352
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||| |||||||||||||||||| ||| ||||| |||||||||||||||||||| || || ||||||||||||||||| | |||||||||||||| ||||    
T  15115451 ggactaaattttaaatgattaaactttgcaaggctaatttgcaaggattaacgattatagggaccaatttttaaacgatctctaattgcaaggatgaaat 15115352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 371 - 486
Target Start/End: Complemental strand, 24210672 - 24210557
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||||||||  |||||| | || |||||||| ||||||||||||||||||| ||| |||||||||||||| | ||||||| | || |||||||||||||    
T  24210672 gtgacgtggcggtgattaggcggggagagggatgaaattttaaatgattaaactttgcaagggtaatttgctatgattaacaattacagagaccaatttt 24210573  T
Q  471 taaacgacccctaatt 486  Q
    |||| |||||||||||    
T  24210572 taaatgacccctaatt 24210557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 30726075 - 30726174
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||| || ||||||||||||| |||||| || |||||||||||||||||||||||||||||||||| ||||    
T  30726075 ggacgaaattttaaatgattaatgatttcaaggctagtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattgcaaggatgaaat 30726174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 33517850 - 33517949
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||| || ||||||||||||| |||||| || |||||||||||||||||||||||||||||||||| ||||    
T  33517850 ggacgaaattttaaatgattaatgattgcaaggctactttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattgcaaggatgaaat 33517949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 371 - 499
Target Start/End: Complemental strand, 12080777 - 12080649
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||| ||||| |||||||| || ||||||||||||||||||||||||||||   | || |||||| |||| | ||||| ||| || || || |||||||    
T  12080777 gtgacatggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaggggtaaattgccatgattagcgattacagggagcaatttt 12080678  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||||||| ||||    
T  12080677 taaacgacccctaattgcaaggatgaaat 12080649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 404 - 499
Target Start/End: Original strand, 3059576 - 3059671
Alignment:
Q  404 gaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||   || ||||| || ||||||||||||| |||||| || |||||||||||||||||||||||||||||||||| ||||    
T  3059576 gaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattgcaaggatgaaat 3059671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 33647267 - 33647366
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||| |||||||||||||||||   || ||||| || ||||||||||||| |||||| || |||||||||||||||||||||||||||||||||| ||||    
T  33647267 ggactaaattttaaatgattaatgattgcaaggttagtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattgcaaggatgaaat 33647366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 377 - 499
Target Start/End: Complemental strand, 30803996 - 30803874
Alignment:
Q  377 tggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacg 476  Q
    ||||| |||||||| || ||||||||||||||||||||||||||||   |  |||||||| |||| ||||||||||| || | ||| |||||||||||||    
T  30803996 tggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgtaagggtaaattgccaggattaacgattacatagatcaatttttaaacg 30803897  T
Q  477 acccctaattgcaaggattaaat 499  Q
    || |||| |||||||||| ||||    
T  30803896 acacctagttgcaaggatgaaat 30803874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 398 - 499
Target Start/End: Complemental strand, 12407622 - 12407521
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaa 497  Q
    |||||| |||||||||||||||||| ||| | || ||||||| ||||||||| |||||| |||||||||||||||||||| || |||||| |||||| ||    
T  12407622 agggaccaaattttaaatgattaaactttgctagagtaatttacaaggattagcgaatacagagaccaatttttaaacgatccttaattgtaaggatgaa 12407523  T
Q  498 at 499  Q
    ||    
T  12407522 at 12407521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 398 - 499
Target Start/End: Original strand, 13379796 - 13379897
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaa 497  Q
    ||||||||||||||||||||||||   || ||||| || |||||||| |||| |||||| || ||||||||||||||||||||||||||||| |||| ||    
T  13379796 agggacgaaattttaaatgattaatgattgcaaggctagtttgcaagaattagcgaatacagggaccaatttttaaacgacccctaattgcagggatcaa 13379895  T
Q  498 at 499  Q
    ||    
T  13379896 at 13379897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 371 - 491
Target Start/End: Complemental strand, 30725900 - 30725781
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||| ||||| |||||||  || ||||||||||||||||||||||||||||   | ||||||||| |||  ||||||| ||| || |||||||||||||    
T  30725900 gtgacatggcagtgattaaatggggagagggacgaaattttaaatgattaaacagtgcaagggtaaattggcaggattagcgattacagagaccaatttt 30725801  T
Q  471 taaacgacccctaattgcaag 491  Q
    ||||||| |||||||||||||    
T  30725800 taaacga-ccctaattgcaag 30725781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 30337734 - 30337833
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||| || ||||||||||||| ||| || || |||||||||||||| ||||||||||||||||||| ||||    
T  30337734 ggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgattacagggaccaatttttaaatgacccctaattgcaaggatcaaat 30337833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 405 - 499
Target Start/End: Original strand, 12408492 - 12408586
Alignment:
Q  405 aaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||| ||| ||||| |||||||||||||||| |||||| |  |||||| |||||||| ||||||||||| |||||| ||||    
T  12408492 aaattttaaatgattaaactttgcaaggataatttgcaaggattagcgaatacaaggaccaacttttaaacaacccctaattgtaaggatgaaat 12408586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 397 - 493
Target Start/End: Original strand, 15116545 - 15116641
Alignment:
Q  397 gagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaata-gagagaccaatttttaaacgacccctaattgcaagga 493  Q
    ||||||| || ||||||||||||||| ||| ||||| || ||||||||||||| ||| || ||| |||||||||||||||||||||||||||||||||    
T  15116545 gagggaccaatttttaaatgattaaactttgcaaggctagtttgcaaggattagcgattacgag-gaccaatttttaaacgacccctaattgcaagga 15116641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 400 - 499
Target Start/End: Complemental strand, 22617996 - 22617896
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagacc-aatttttaaacgacccctaattgcaaggattaaa 498  Q
    |||||| |||||||||||||||  ||| |||||||| | ||||||||||| |||||  ||||||| |||||||||||||| ||||||||||||||| |||    
T  22617996 ggacgacattttaaatgattaatatttgcaagggtagtctgcaaggattagcgaatgcagagacccaatttttaaacgactcctaattgcaaggatgaaa 22617897  T
Q  499 t 499  Q
    |    
T  22617896 t 22617896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 400 - 499
Target Start/End: Complemental strand, 11434914 - 11434815
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||| || ||||||| ||||| |||||| |  |||||||||||||||||||| ||||||||||||| ||||    
T  11434914 ggacgaaattttaaatgattaatgattgcaaggctagtttgcaacgattagcgaatacatggaccaatttttaaacgacccttaattgcaaggatgaaat 11434815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 12080952 - 12081051
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||  || ||||||||||||| |||||| || ||| |||||||||||||| ||||||||||||||| ||||    
T  12080952 ggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgaatacagggacaaatttttaaacgactcctaattgcaaggatgaaat 12081051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 30804177 - 30804276
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||| | || |||||||| |||| |||||| || || ||||||||||||||||||||||||||||||| ||||    
T  30804177 ggacgaaattttaaatgattaatgattgcaacgctagtttgcaagaattagcgaatacagggatcaatttttaaacgacccctaattgcaaggatgaaat 30804276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 375 - 493
Target Start/End: Original strand, 14196875 - 14196993
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || ||||||| |||||||||||||||||||   || ||||| ||| |||| ||||||| | | || || ||| ||||||||||    
T  14196875 cgtggcagtgattaagtggggagaggggcgaaattttaaatgattaacaattgcaaggctaaattgccaggattagcaattacagggacgaatttttaaa 14196974  T
Q  475 cgacccctaattgcaagga 493  Q
    |||| ||||||||||||||    
T  14196975 cgacgcctaattgcaagga 14196993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 371 - 499
Target Start/End: Complemental strand, 3059398 - 3059270
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||| ||||| |||||||| |  ||||||||||||||||||||||||||||   | ||||||||| |||| ||||||| ||| || |  ||| |  |||    
T  3059398 gtgacatggcagtgattaagtgaggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgctaggattagcgattacatggacaatattt 3059299  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    |||||||||| ||||||||||||| ||||    
T  3059298 taaacgacccttaattgcaaggatgaaat 3059270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 401 - 493
Target Start/End: Complemental strand, 7905354 - 7905262
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||  | ||||||||| |||| ||||||||||| || |  ||| |||||||||| ||| ||||||||||||||    
T  7905354 gacgaaattttaaatgattaaataatgcaagggtaaattgccaggattaacgattacaaggactaatttttaaatgacgcctaattgcaagga 7905262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 375 - 499
Target Start/End: Original strand, 17734454 - 17734578
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || ||||||||| ||||||||||||||||||   | ||||||||| |||  ||||||| ||| || |  || |||||||||||    
T  17734454 cgtggcagtgattaagtggggagagggacaaaattttaaatgattaaacaatgcaagggtaaattgataggattagcgattacatggatcaatttttaaa 17734553  T
Q  475 cgacccctaattgcaaggattaaat 499  Q
    |||||| |||||| |||||| ||||    
T  17734554 cgacccataattgtaaggatcaaat 17734578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 371 - 499
Target Start/End: Complemental strand, 33647104 - 33646976
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||||||||| |||||||  || ||||| |||||||||||||||||||||||  | ||||||||| |||  | ||||| ||| || || || || ||||    
T  33647104 gtgacgtggcagtgattaaatggggagagagacgaaattttaaatgattaaataatgcaagggtaaattggcaagattagcgattacagggatcactttt 33647005  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    |||||||||| |||||| |||||| ||||    
T  33647004 taaacgacccttaattgtaaggatgaaat 33646976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 400 - 499
Target Start/End: Complemental strand, 17734308 - 17734209
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||| || ||||||||||||| | | || |   ||||||||||||||||||||||||||||||||| ||||    
T  17734308 ggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcaattacaagaaccaatttttaaacgacccctaattgcaaggatcaaat 17734209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 400 - 499
Target Start/End: Complemental strand, 20651122 - 20651023
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||| |  ||||||||||||| |||||| ||  |||||||||||||||| ||||||||||| |||| ||||    
T  20651122 ggacgaaattttaaatgattaatgattgcaaggctggtttgcaaggattagcgaatacaggaaccaatttttaaacgatccctaattgcagggatcaaat 20651023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 404 - 493
Target Start/End: Original strand, 141060 - 141149
Alignment:
Q  404 gaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||| |||| |||| ||||||||||||||||||||| || ||  || ||||||||||  ||  |||||||||||||    
T  141060 gaaattttaaatgattaatttttgcaagagtaatttgcaaggattaacgattacaggaacaaatttttaaataacatctaattgcaagga 141149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 404 - 493
Target Start/End: Original strand, 149081 - 149170
Alignment:
Q  404 gaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||| |||| |||| ||||||||||||||||||||| || ||  || ||||||||||  ||  |||||||||||||    
T  149081 gaaattttaaatgattaatttttgcaagagtaatttgcaaggattaacgattacaggaacaaatttttaaataacatctaattgcaagga 149170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 400 - 493
Target Start/End: Complemental strand, 7160916 - 7160823
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||   | |||| |||| |||| ||||||| ||| || |||||| |||||||||| ||| ||||||||||||||    
T  7160916 ggacgaaattttaaatgattaaacaatgcaagagtaaattgccaggattagcgattacagagactaatttttaaatgacgcctaattgcaagga 7160823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 398 - 499
Target Start/End: Original strand, 20651961 - 20652062
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaa 497  Q
    ||||||||||||||||||||||||   || ||||| |  |||||||||||||  ||||| || || ||||||||||||||||| |||||||| | |||||    
T  20651961 agggacgaaattttaaatgattaacgattgcaaggctggtttgcaaggattagtgaatacagggatcaatttttaaacgacccataattgcaggaattaa 20652060  T
Q  498 at 499  Q
    ||    
T  20652061 at 20652062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 375 - 492
Target Start/End: Original strand, 28000645 - 28000762
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || |||||||||||||||||||||||||||   || ||||| ||| |||| || |||| | | || |||||| ||||||||||    
T  28000645 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaacaattgcaaggctaaattgccagaattagcaattacagagacaaatttttaaa 28000744  T
Q  475 cgacccctaattgcaagg 492  Q
     | | |||||||||||||    
T  28000745 tgccgcctaattgcaagg 28000762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 363 - 499
Target Start/End: Complemental strand, 13378674 - 13378538
Alignment:
Q  363 gctaatcggtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagaga 462  Q
    ||||||| ||||||||||| |||||||  ||   ||||||| || |||||| |||||||||||||  |||| || |||| ||||||||| |||| |  ||    
T  13378674 gctaatcagtgacgtggcactgattaactgggttgagggaccaatttttaagtgattaaattttaggagggcaaattgccaggattaacaaatacaagga 13378575  T
Q  463 ccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||| |||||||| |||||||| ||||| ||| |||||    
T  13378574 ccattttttaaatgacccctatttgcagggagtaaat 13378538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 400 - 499
Target Start/End: Complemental strand, 21627825 - 21627726
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||| || ||||||||||||| |||||| |  || |||||||||||||| || ||||| ||||||| ||||    
T  21627825 ggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacatggatcaatttttaaacgatccttaattacaaggatgaaat 21627726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 401 - 499
Target Start/End: Original strand, 11393121 - 11393219
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||| ||||||||||   || ||||  || ||||||||||||| ||||||  | |||||||||||||||||||||||||| ||| ||| ||||    
T  11393121 gacgaaatttgaaatgattaatgattgcaagtctagtttgcaaggattagcgaatacggggaccaatttttaaacgacccctaattacaaagatgaaat 11393219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 363 - 489
Target Start/End: Original strand, 28498304 - 28498430
Alignment:
Q  363 gctaatcggtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagaga 462  Q
    ||||||| ||||||||||| |||||||  ||    |||||| |||||||||||||||||| |||   |||||| ||||| ||||||| ||| || |  ||    
T  28498304 gctaatcagtgacgtggcagtgattaactgggctcagggaccaaattttaaatgattaaactttgggagggtagtttgccaggattagcgattacaagga 28498403  T
Q  463 ccaatttttaaacgacccctaattgca 489  Q
    |||||||||||| || |||||||||||    
T  28498404 ccaatttttaaatgagccctaattgca 28498430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 400 - 493
Target Start/End: Complemental strand, 31406990 - 31406897
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    ||||||||||||||||||||||||  | |||||  || || | ||||||||||| || || ||| |||||||||| ||| ||||||||||||||    
T  31406990 ggacgaaattttaaatgattaaataatgcaaggacaaattaccaggattaacgattacagggactaatttttaaatgacgcctaattgcaagga 31406897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 400 - 493
Target Start/End: Original strand, 31407192 - 31407285
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||   | ||||||||| |||  ||||||| ||| || || ||| |||||||||| ||| ||||||||||||||    
T  31407192 ggacgaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacagggactaatttttaaatgacgcctaattgcaagga 31407285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 1215153 - 1215208
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaatttt 426  Q
    ||||||||||| |||||||| || || |||||||||||||||| ||||||||||||    
T  1215153 gtgacgtggcagtgattaagtggggatagggacgaaattttaagtgattaaatttt 1215208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 400 - 491
Target Start/End: Complemental strand, 21836143 - 21836053
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaag 491  Q
    |||||||||||||||||||||||   | ||||||||| |||| ||||||| ||| || | |||| |||||||||| ||| ||||||||||||    
T  21836143 ggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattaca-agactaatttttaaatgacgcctaattgcaag 21836053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 408 - 499
Target Start/End: Original strand, 26464523 - 26464614
Alignment:
Q  408 ttttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||| ||||||| |||||  |||| || |||| ||||||||| |||| || ||||| |||||||| |||||||||||||| |||| ||||    
T  26464523 ttttaagtgattaatttttaggagggaaaattgccaggattaacaaatacagggaccattttttaaatgacccctaattgcagggatgaaat 26464614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 400 - 493
Target Start/End: Complemental strand, 6517614 - 6517522
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||   | ||||| ||| |||| ||||||| ||| || | |||| |||||||||| ||| ||||||||||||||    
T  6517614 ggacgaaattttaaatgattaaacaatgcaagg-taaattgccaggattagcgattacaaagactaatttttaaatgacgcctaattgcaagga 6517522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 400 - 493
Target Start/End: Original strand, 15913862 - 15913955
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||| ||||||   |||| ||||||||| | | ||||||||| || |  ||| |||||||||| ||||| ||||||||||||    
T  15913862 ggacgaaattttaaattattaaacaatacaggggtaattttccaagattaacgattatatggacaaatttttaaatgacccttaattgcaagga 15913955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 400 - 493
Target Start/End: Complemental strand, 22502886 - 22502793
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||   | ||||||||| |||  ||||||| ||| || |  ||| |||||||||| ||| ||||||||||||||    
T  22502886 ggacgaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacaaggactaatttttaaatgacgcctaattgcaagga 22502793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 401 - 493
Target Start/End: Original strand, 7161119 - 7161211
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    ||||||||||||||||||||||   | ||||||||| |||  |||||||  || || || ||| |||||||||| ||| ||||||||||||||    
T  7161119 gacgaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagtgattatagggactaatttttaaatgacgcctaattgcaagga 7161211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 375 - 421
Target Start/End: Original strand, 363090 - 363136
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaa 421  Q
    ||||||| |||||||| || |||||||||||||||||||| ||||||    
T  363090 cgtggcagtgattaagtggggagagggacgaaattttaaacgattaa 363136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 400 - 494
Target Start/End: Original strand, 21836344 - 21836438
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggat 494  Q
    |||||||||||||||||||||||   | ||||||||| |||  ||||||| ||| || |   || |||||||||| ||| |||||||||||||||    
T  21836344 ggacgaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacaagaactaatttttaaatgacgcctaattgcaaggat 21836438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 484
Target Start/End: Complemental strand, 11392979 - 11392866
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||| ||||| ||||||||  | ||||  ||||||||||||||||||||||   | ||||||||| ||   ||||||| ||| || |  ||||||||||    
T  11392979 gtgacatggcagtgattaagttgggagatagacgaaattttaaatgattaaacaatgcaagggtaaattattaggattagcgattacaaggaccaatttt 11392880  T
Q  471 taaacgacccctaa 484  Q
    |||||||| |||||    
T  11392879 taaacgactcctaa 11392866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 421
Target Start/End: Original strand, 11435957 - 11436006
Alignment:
Q  372 tgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaa 421  Q
    ||||||||||||||||||| ||    ||||||||||||||||||||||||    
T  11435957 tgacgtggcaatgattaagtgggtcaagggacgaaattttaaatgattaa 11436006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 498
Target Start/End: Complemental strand, 32593601 - 32593504
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaa 498  Q
    |||||||||||||||||||||    | ||||||||| |||  ||||||| ||| || || ||| |||||||||| ||| |||||||| ||||| ||||    
T  32593601 gacgaaattttaaatgattaacaaatgcaagggtaaattgtcaggattagcgattatagggactaatttttaaatgacgcctaattgaaaggactaaa 32593504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 404 - 432
Target Start/End: Complemental strand, 139901 - 139873
Alignment:
Q  404 gaaattttaaatgattaaattttacaagg 432  Q
    |||||||||||||||||||||||||||||    
T  139901 gaaattttaaatgattaaattttacaagg 139873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 404 - 432
Target Start/End: Complemental strand, 147922 - 147894
Alignment:
Q  404 gaaattttaaatgattaaattttacaagg 432  Q
    |||||||||||||||||||||||||||||    
T  147922 gaaattttaaatgattaaattttacaagg 147894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 401 - 493
Target Start/End: Original strand, 7905558 - 7905650
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||| |||||||||||   | ||||||||| |||| || |||| ||| || || ||| ||||| |||| ||| ||||||||||||||    
T  7905558 gacgaaatttgaaatgattaaacaatgcaagggtaaattgccagaattagcgattatagggacaaatttataaatgacacctaattgcaagga 7905650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 401 - 493
Target Start/End: Original strand, 22503089 - 22503181
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    ||||||| ||||||||||||||   | ||||| ||| |||| ||||||| ||| || |  ||| |||||||||| ||| ||||||||||||||    
T  22503089 gacgaaaatttaaatgattaaacaatgcaaggataaattgccaggattagcgattacaaggactaatttttaaatgacgcctaattgcaagga 22503181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 397 - 493
Target Start/End: Original strand, 25486208 - 25486304
Alignment:
Q  397 gagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||||   || ||||| ||| ||||  |||||| | | || || ||| |||||||||||||| | || |||||||||    
T  25486208 gagggacgaaattttaaatgattaacaattgcaaggctaaattgccgggattagcaattacagggacgaatttttaaacgacgcttagttgcaagga 25486304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 5e-33; HSPs: 90)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 375 - 499
Target Start/End: Original strand, 23663805 - 23663929
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || ||||||||||||||||||||||||||||   | ||||||||| |||| ||||||| ||| || |||||||||||||||||    
T  23663805 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagagaccaatttttaaa 23663904  T
Q  475 cgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||| ||||    
T  23663905 cgacccctaattgcaaggatcaaat 23663929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 371 - 499
Target Start/End: Original strand, 31608800 - 31608928
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||||||||| |||||||| || |||||||||||||||||||||||||| |   | ||||||||| |||||||||||| |||||| |  ||||||||||    
T  31608800 gtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattagacaatgcaagggtaaattgcaaggattagcgaatacatggaccaatttt 31608899  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    |||||||||| ||||||||||||| ||||    
T  31608900 taaacgacccttaattgcaaggatgaaat 31608928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 371 - 499
Target Start/End: Original strand, 4405947 - 4406075
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    |||||||| || |||||||| ||  |||||||||||||||||||||||||||  || ||||||||| |||||||||||||| |||| |  ||||||||||    
T  4405947 gtgacgtgacagtgattaagtgggaagagggacgaaattttaaatgattaaacattgcaagggtaaattgcaaggattaacaaatacatggaccaatttt 4406046  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    ||||| |||||||||| ||||||| ||||    
T  4406047 taaacaacccctaattacaaggatgaaat 4406075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 371 - 499
Target Start/End: Complemental strand, 39071817 - 39071689
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    |||||| |||| |||||||| || ||||||||||||||||||||||||||||   | ||||||||| |||  ||||||| ||| || || ||||||||||    
T  39071817 gtgacgcggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacagggaccaatttt 39071718  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||||||| ||||    
T  39071717 taaacgacccctaattgcaaggatgaaat 39071689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 38862879 - 38862978
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||| || ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  38862879 ggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagagaccaatttttaaacgacccctaattgcaaggatgaaat 38862978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 375 - 499
Target Start/End: Original strand, 8316879 - 8317003
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || |||| |||||||||||||||||||||||   | ||||||||| |||| ||||||| ||| || |  ||||||||||||||    
T  8316879 cgtggcagtgattaagtggggagatggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacaaggaccaatttttaaa 8316978  T
Q  475 cgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||| ||||    
T  8316979 cgacccctaattgcaaggatcaaat 8317003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 383 - 499
Target Start/End: Original strand, 23698543 - 23698659
Alignment:
Q  383 tgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccct 482  Q
    |||||||| || ||||||||||||||||||||||||||||   | ||||||||| |||| ||||||| ||| || || ||||||||||||||||||||||    
T  23698543 tgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagggaccaatttttaaacgacccct 23698642  T
Q  483 aattgcaaggattaaat 499  Q
    |||| ||||||| ||||    
T  23698643 aattacaaggatcaaat 23698659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 398 - 489
Target Start/End: Original strand, 2535864 - 2535955
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgca 489  Q
    ||||||||||||||||||||||||| |||  ||||||||||||| ||||||||||| || || |||||||||||||| ||||||||||||||    
T  2535864 agggacgaaattttaaatgattaaactttgtaagggtaatttgccaggattaacgattacagggaccaatttttaaatgacccctaattgca 2535955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 400 - 499
Target Start/End: Complemental strand, 8316765 - 8316666
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||| || |||||||||||||||||||| |  |||||||||||||||||||||||||||||||||| ||||    
T  8316765 ggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattaacgaatacatggaccaatttttaaacgacccctaattgcaaggatgaaat 8316666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 400 - 499
Target Start/End: Complemental strand, 23663657 - 23663558
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||| || ||| |||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||    
T  23663657 ggacgaaattttaaatgattaatgatttcaaggttagtttccaaggattaacgaatacagggaccaatttttaaacgacccctaattgcaaggatgaaat 23663558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 400 - 497
Target Start/End: Original strand, 35756898 - 35756996
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacga-cccctaattgcaaggattaa 497  Q
    ||||||||||||||||||||||   || ||||  || |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  35756898 ggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattaacgaatacagagaccaatttttaaacgaccccctaattgcaaggattaa 35756996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 371 - 493
Target Start/End: Complemental strand, 36928617 - 36928495
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||||||||| |||||||| || ||||||||||||||||||||||||||||   | ||||||||| |||  ||||||| ||| || | |||||||||||    
T  36928617 gtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacatagaccaatttt 36928518  T
Q  471 taaacgacccctaattgcaagga 493  Q
    |||||||||| |||||| |||||    
T  36928517 taaacgacccttaattgaaagga 36928495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 378 - 499
Target Start/End: Original strand, 12273147 - 12273268
Alignment:
Q  378 ggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacga 477  Q
    |||| |||||||| ||  |||||||||||||||||||||||||||   | ||||||||| |||   |||||||||| || || |||||||||||||||||    
T  12273147 ggcagtgattaagtgggaagagggacgaaattttaaatgattaaacaatgcaagggtaaattgacgggattaacgattacagggaccaatttttaaacga 12273246  T
Q  478 cccctaattgcaaggattaaat 499  Q
    ||||||||||||||||| ||||    
T  12273247 cccctaattgcaaggatcaaat 12273268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 398 - 499
Target Start/End: Complemental strand, 20385682 - 20385581
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaa 497  Q
    ||||||||||||||||||||||||   || ||||  || ||||||||||||| |||||| || |||||||||||||||||||||||||||||||||| ||    
T  20385682 agggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattgcaaggatcaa 20385583  T
Q  498 at 499  Q
    ||    
T  20385582 at 20385581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 398 - 499
Target Start/End: Original strand, 20386744 - 20386845
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaa 497  Q
    ||||||||||||||||||||||||   || | ||| || ||||||||||||| |||||| || |||||||||||||||||||||||||||||||||| ||    
T  20386744 agggacgaaattttaaatgattaataattgcgaggctagtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattgcaaggatcaa 20386843  T
Q  498 at 499  Q
    ||    
T  20386844 at 20386845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 371 - 499
Target Start/End: Original strand, 16388813 - 16388941
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||||||||| |||||||| || ||||||||||||||||||||||||||||   | ||||||||| |||| ||||||| | | || |   |||||||||    
T  16388813 gtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcaattacatgaaccaatttt 16388912  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    |||| ||||||||||||||||||| ||||    
T  16388913 taaatgacccctaattgcaaggatgaaat 16388941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 400 - 499
Target Start/End: Complemental strand, 12273030 - 12272931
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||| || ||||||||||||| ||| || |||||||||||||||||||| |||||||||||||||| ||||    
T  12273030 ggacgaaattttaaatgattaataattgcaaggctagtttgcaaggattagcgattacagagaccaatttttaaacgatccctaattgcaaggatcaaat 12272931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 375 - 493
Target Start/End: Complemental strand, 36325371 - 36325253
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || |||||||||||||||||||||||||||   || ||||| ||| |||| ||||||||| | || || ||| ||||||||||    
T  36325371 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaacaattgcaaggctaaattgccaggattaacaattacagggacgaatttttaaa 36325272  T
Q  475 cgacccctaattgcaagga 493  Q
    ||||||||||||| |||||    
T  36325271 cgacccctaattgtaagga 36325253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 401 - 499
Target Start/End: Complemental strand, 40318075 - 40317977
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||| ||||||||||||||||   || ||||| || ||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||| ||||    
T  40318075 gacgcaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagagacaaatttttaaacgacccctaattgcaaggatgaaat 40317977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 371 - 499
Target Start/End: Complemental strand, 1425194 - 1425066
Alignment:
Q  371 gtgacgtggcaatgattaaga-ggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaattt 469  Q
    ||||||||||||||||||||  ||| | ||| || |||||||||||||||||   || ||||| || |||||||||||||  ||||| || |||||||||    
T  1425194 gtgacgtggcaatgattaagttggtcaaagg-actaaattttaaatgattaatgattgcaaggctagtttgcaaggattagtgaatacagggaccaattt 1425096  T
Q  470 ttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||||| ||||    
T  1425095 ttaaacgacccctaattgcaaggatcaaat 1425066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 371 - 499
Target Start/End: Complemental strand, 13186201 - 13186073
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||||||||| |||||||| || ||||| ||||||||||||||||||||||   | ||||||||| |||  ||||||| ||| || |   |||||||||    
T  13186201 gtgacgtggcagtgattaagtggggagagagacgaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacatgaaccaatttt 13186102  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    ||||||| |||||||||||||||| ||||    
T  13186101 taaacgatccctaattgcaaggatgaaat 13186073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 400 - 499
Target Start/End: Complemental strand, 12199062 - 12198963
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||  || ||||||||||||| ||| || || |||||||||||||||||||||||||||||||||| ||||    
T  12199062 ggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgattatagggaccaatttttaaacgacccctaattgcaaggatcaaat 12198963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 400 - 499
Target Start/End: Complemental strand, 12443490 - 12443391
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||  || ||||||||||||| ||| || || |||||||||||||||||||||||||||||||||| ||||    
T  12443490 ggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgattatagggaccaatttttaaacgacccctaattgcaaggatcaaat 12443391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 38955988 - 38956087
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||| |||||||||||||||||   || ||||| || ||| ||||||||| |||||| || |||||||||||||||||||||||||||||||||| ||||    
T  38955988 ggactaaattttaaatgattaatgattgcaaggctagtttacaaggattagcgaatacagggaccaatttttaaacgacccctaattgcaaggatcaaat 38956087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 375 - 493
Target Start/End: Complemental strand, 11674831 - 11674714
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || |||||||||||||||||||||||||||   || ||||| ||| |||| ||||||||| | || || ||| ||||||||||    
T  11674831 cgtggcagtgattaagtgg-gagagggacgaaattttaaatgattaacaattgcaaggctaaattgccaggattaacaattacagggacgaatttttaaa 11674733  T
Q  475 cgacccctaattgcaagga 493  Q
    |||| ||||||||||||||    
T  11674732 cgacgcctaattgcaagga 11674714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 401 - 499
Target Start/End: Original strand, 13186376 - 13186474
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||||   || ||||| || ||||||||||||| |||||| |   ||||||||||||||||||||||||||||||||| ||||    
T  13186376 gacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacatgaaccaatttttaaacgacccctaattgcaaggatgaaat 13186474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 375 - 499
Target Start/End: Original strand, 1425313 - 1425436
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || ||||||||||||||||||||||||||||   | || |||||| |||| |||||||  || || || ||||||||||||||    
T  1425313 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaggggtaaattgccaggattagtgattacag-gaccaatttttaaa 1425411  T
Q  475 cgacccctaattgcaaggattaaat 499  Q
    ||||| |||||| ||||||| ||||    
T  1425412 cgacctctaattacaaggatcaaat 1425436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 375 - 499
Target Start/End: Original strand, 22915649 - 22915773
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || |||||||||| |||||||||||||||||   | ||||||||| |||| | ||||| ||| || |  ||||||||||||||    
T  22915649 cgtggcagtgattaagtggggagagggacggaattttaaatgattaaacaatgcaagggtaaattgccaagattagcgattacatggaccaatttttaaa 22915748  T
Q  475 cgacccctaattgcaaggattaaat 499  Q
    ||| ||||| |||||||||| ||||    
T  22915749 cgatccctagttgcaaggatcaaat 22915773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 371 - 499
Target Start/End: Original strand, 40318251 - 40318379
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||| ||||| |||||||| |  |||| |||||||||||||||||||||||   | ||||||||| |||| ||||||| ||| || |  ||| ||||||    
T  40318251 gtgacatggcagtgattaagtgaggagaaggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacatggactaatttt 40318350  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    ||||| |||||||||||||||||| ||||    
T  40318351 taaacaacccctaattgcaaggatgaaat 40318379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 384 - 499
Target Start/End: Original strand, 4994957 - 4995071
Alignment:
Q  384 gattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgaccccta 483  Q
    ||||||| || |||||||||||||||| |||||||||||   | ||||||||| |||  ||||||| ||| || || |||||||||||||| ||||||||    
T  4994957 gattaagtggggagagggacgaaatttgaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacag-gaccaatttttaaatgaccccta 4995055  T
Q  484 attgcaaggattaaat 499  Q
    ||||||||||| ||||    
T  4995056 attgcaaggatgaaat 4995071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 39071958 - 39072056
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||| || ||||||||||||| |||||| || |||||||||||||||||||| | ||||||||||| ||||    
T  39071958 ggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggatta-cgaatacagggaccaatttttaaacgacccttgattgcaaggatgaaat 39072056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 293 - 363
Target Start/End: Original strand, 29566414 - 29566484
Alignment:
Q  293 gggggcattttggtcattttgcttttggctgaagtcttaggggtatttttgtcagttcacatcatcttttg 363  Q
    ||||||||||||   |||||| |||||||| |||||||||||||||||||||||||||||| |||||||||    
T  29566414 gggggcattttgcctattttgtttttggctaaagtcttaggggtatttttgtcagttcacaccatcttttg 29566484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 400 - 494
Target Start/End: Original strand, 34061644 - 34061738
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggat 494  Q
    |||||||||||||||||||||||   | |||||| ||||||||||||||| |||||| |  || |||||||||||||||  ||||||||||||||    
T  34061644 ggacgaaattttaaatgattaaagaatgcaagggcaatttgcaaggattagcgaatacatggatcaatttttaaacgacgtctaattgcaaggat 34061738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 401 - 499
Target Start/End: Original strand, 34685575 - 34685672
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||||   ||  |||| || ||||||||||||| |||||| | |||||||||||||||||| |||||||||||||||| ||||    
T  34685575 gacgaaattttaaatgattaatgattgtaaggctagtttgcaaggattagcgaataca-agaccaatttttaaacgatccctaattgcaaggataaaat 34685672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 398 - 499
Target Start/End: Original strand, 30712031 - 30712131
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaa 497  Q
    ||||||||||||||||||||||||   || ||||| || ||||||||||||| | |||| || |||||||||||||||| |||||||| |||||||| ||    
T  30712031 agggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcaaatacag-gaccaatttttaaacggcccctaatcgcaaggatcaa 30712129  T
Q  498 at 499  Q
    ||    
T  30712130 at 30712131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 398 - 499
Target Start/End: Original strand, 30719808 - 30719908
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaa 497  Q
    ||||||||||||||||||||||||   || ||||| || ||||||||||||| | |||| || |||||||||||||||| |||||||| |||||||| ||    
T  30719808 agggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcaaatacag-gaccaatttttaaacggcccctaatcgcaaggatcaa 30719906  T
Q  498 at 499  Q
    ||    
T  30719907 at 30719908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 398 - 499
Target Start/End: Original strand, 34177284 - 34177385
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaa 497  Q
    |||||||||||||||||||||||||   | ||||| || ||| ||||||||| |||||| |  |||||||||||||||||||||||||| ||| ||| ||    
T  34177284 agggacgaaattttaaatgattaaagaatgcaaggctagtttacaaggattagcgaatacaaggaccaatttttaaacgacccctaattacaaagatgaa 34177383  T
Q  498 at 499  Q
    ||    
T  34177384 at 34177385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 401 - 489
Target Start/End: Complemental strand, 8746435 - 8746347
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgca 489  Q
    |||||||||||||||||||||  ||| |||||||||||||  | ||||||||| || || |||| ||||||||| ||||||||||||||    
T  8746435 gacgaaattttaaatgattaaggtttgcaagggtaatttgtcacgattaacgattacagtgaccgatttttaaatgacccctaattgca 8746347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 404 - 491
Target Start/End: Complemental strand, 7294209 - 7294122
Alignment:
Q  404 gaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaag 491  Q
    |||||||||||||||||||   | ||||| || ||| ||||||||| |||||| ||||| |||||||||||||||| |||||||||||    
T  7294209 gaaattttaaatgattaaagaatgcaaggctagtttacaaggattagcgaatatagagatcaatttttaaacgacctctaattgcaag 7294122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 371 - 489
Target Start/End: Complemental strand, 35756723 - 35756606
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||| ||||| |||||||| || ||||||||||||||||||||||||||||   | ||||| ||| |||  |||||||  || || | |||||||||||    
T  35756723 gtgacatggcagtgattaagtggggagagggacgaaattttaaatgattaaacaattcaaggataaattgtcaggattagtgattata-agaccaatttt 35756625  T
Q  471 taaacgacccctaattgca 489  Q
    |||| ||||||||||||||    
T  35756624 taaatgacccctaattgca 35756606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 400 - 493
Target Start/End: Complemental strand, 7983540 - 7983447
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||   | ||||||||| |||| ||||||| ||| || || ||| |||||||||| ||| ||||||||||||||    
T  7983540 ggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagggactaatttttaaatgacgcctaattgcaagga 7983447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 400 - 493
Target Start/End: Complemental strand, 15230043 - 15229950
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||   | ||||||||| |||| ||||||| ||| || || ||| |||||||||| ||| ||||||||||||||    
T  15230043 ggacgaaattttaaatgattaaacaatccaagggtaaattgccaggattagcgattacagggactaatttttaaatgacgcctaattgcaagga 15229950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 401 - 493
Target Start/End: Complemental strand, 6471801 - 6471709
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    ||||||||||||||||||||||   | ||||||||| |||| ||||||| ||| || ||||||  ||||||||| ||| ||||||||||||||    
T  6471801 gacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattatagagactcatttttaaatgacgcctaattgcaagga 6471709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 401 - 493
Target Start/End: Original strand, 10445650 - 10445742
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    ||||||||||||||||||||||   | ||||||||| |||| ||||||| ||| || || ||| |||||||||| ||| ||||||||||||||    
T  10445650 gacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagggactaatttttaaatgacacctaattgcaagga 10445742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 401 - 493
Target Start/End: Complemental strand, 44664619 - 44664527
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    ||||||||||||||||||||||   | ||||| ||| |||| ||||||||||| || || ||| |||||||||| ||| ||||||||||||||    
T  44664619 gacgaaattttaaatgattaaacaatgcaaggttaaattgccaggattaacgattacagggactaatttttaaatgacgcctaattgcaagga 44664527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 398 - 489
Target Start/End: Complemental strand, 2534809 - 2534718
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgca 489  Q
    |||||||||||||||||||||||||   | |||| ||| ||||||||||||| ||| || |   ||||||||||||||||||| ||||||||    
T  2534809 agggacgaaattttaaatgattaaacaatgcaagagtagtttgcaaggattagcgattacatgtaccaatttttaaacgacccataattgca 2534718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 329 - 494
Target Start/End: Complemental strand, 11762024 - 11761858
Alignment:
Q  329 ttaggggtatttttgtcagttcacatcatcttttgctaatcgg-tgacgtggcaatgattaagaggtga-gagggacgaaattttaaatgattaaatttt 426  Q
    |||||||||||||||||  ||| |||  | ||||||||||  | |||||||||| ||||||| || ||| |||| ||||||||||||||||||||  |||    
T  11762024 ttaggggtatttttgtccattcccatgctattttgctaatttgatgacgtggcagtgattaacag-tgatgaggtacgaaattttaaatgattaacgttt 11761926  T
Q  427 acaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggat 494  Q
     || ||| ||||||  | ||||||||| || |||||| ||||||||||  | ||||||||||| ||||    
T  11761925 gcaggggcaatttgacaagattaacgattacagagacgaatttttaaataatccctaattgcagggat 11761858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 36928792 - 36928891
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||| || ||||||||||||| | |||| | ||||||||||||||||||   |||||||||| ||| ||||    
T  36928792 ggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcaaatacatagaccaatttttaaacgatatctaattgcaacgatgaaat 36928891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 376 - 499
Target Start/End: Complemental strand, 38955839 - 38955716
Alignment:
Q  376 gtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaac 475  Q
    |||||| |||||||| |  |||||||| |||||||||||||||||||   | || |||||| || | ||||||| ||| || |  |||||||||||||||    
T  38955839 gtggcagtgattaagtgaggagagggatgaaattttaaatgattaaacaatgcaggggtaaattaccaggattagcgattacaatgaccaatttttaaac 38955740  T
Q  476 gacccctaattgcaaggattaaat 499  Q
    || ||| |||||||||||| ||||    
T  38955739 gatccccaattgcaaggatcaaat 38955716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 402 - 493
Target Start/End: Original strand, 44664824 - 44664915
Alignment:
Q  402 acgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||   | ||||||||| |||  ||||||| ||| || |||||| |||||||||| ||| ||||||||||||||    
T  44664824 acgaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacagagactaatttttaaatgacgcctaattgcaagga 44664915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 401 - 499
Target Start/End: Complemental strand, 4994768 - 4994670
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||| |||||   || ||||| || ||| ||||||||| |||||| ||||| |||||||||||| | |||||||||||| ||| ||||    
T  4994768 gacgaaattttaaataattaatgattgcaaggctagtttccaaggattagcgaatacagagatcaatttttaaacaatccctaattgcaacgatgaaat 4994670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 437 - 499
Target Start/End: Complemental strand, 33357573 - 33357511
Alignment:
Q  437 tttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||| |||||| |  || ||||||||||||||||||||||||||||||| ||||    
T  33357573 tttgcaaggattagcgaatacatggatcaatttttaaacgacccctaattgcaaggatgaaat 33357511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 400 - 493
Target Start/End: Original strand, 234054 - 234147
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||   | ||||||||| |||| ||||||||| | || || ||| |||||||||| ||  ||||||||||||||    
T  234054 ggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattaacaattacagggactaatttttaaatgatgcctaattgcaagga 234147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 400 - 493
Target Start/End: Original strand, 710465 - 710558
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||   | ||||||||| |||| ||||||||| | || || ||| |||||||||| ||  ||||||||||||||    
T  710465 ggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattaacaattacagggactaatttttaaatgatgcctaattgcaagga 710558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 400 - 493
Target Start/End: Original strand, 747677 - 747770
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||   | ||||||||| |||| ||||||||| | || || ||| |||||||||| ||  ||||||||||||||    
T  747677 ggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattaacaattacagggactaatttttaaatgatgcctaattgcaagga 747770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 400 - 493
Target Start/End: Original strand, 871572 - 871665
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||   | ||||||||| |||| ||||||||| | || || ||| |||||||||| ||  ||||||||||||||    
T  871572 ggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattaacaattacagggactaatttttaaatgatgcctaattgcaagga 871665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 404 - 493
Target Start/End: Original strand, 25124881 - 25124970
Alignment:
Q  404 gaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||   | ||||||||| |||| || |||| ||| || |||||| |||||||||| ||| ||||||||||||||    
T  25124881 gaaattttaaatgattaaacaatgcaagggtaaattgccagaattagcgattacagagactaatttttaaatgacacctaattgcaagga 25124970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 400 - 493
Target Start/End: Original strand, 36325519 - 36325612
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||| |||||||||||||||||   || ||||| ||| |||| ||||||||| | || |||||| |||||||||| ||| ||||||||||||||    
T  36325519 ggaccaaattttaaatgattaacaattgcaaggctaaattgccaggattaacaattacagagacgaatttttaaatgacgcctaattgcaagga 36325612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 409 - 493
Target Start/End: Original strand, 10749833 - 10749917
Alignment:
Q  409 tttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    ||||| |||||||  ||| |||||||||||||  ||||||||||| || |  |||||||||||||| || |||||||||||||||    
T  10749833 tttaagtgattaacgtttgcaagggtaatttgacaggattaacgattacatggaccaatttttaaatgatccctaattgcaagga 10749917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 499
Target Start/End: Complemental strand, 23698421 - 23698321
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacga-cccctaattgcaaggattaaa 498  Q
    |||||||||||||| |||||||   || ||||| || |||||||| |||| ||| || || ||| ||||||||||||| ||||||||||||||||| |||    
T  23698421 ggacgaaattttaactgattaatgattgcaaggctagtttgcaagaattagcgattacagggactaatttttaaacgaccccctaattgcaaggatcaaa 23698322  T
Q  499 t 499  Q
    |    
T  23698321 t 23698321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 376 - 499
Target Start/End: Original strand, 36186359 - 36186479
Alignment:
Q  376 gtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaac 475  Q
    |||||| ||||||||  | ||||||||||||||||||||||||||||   | ||| ||||| |||  ||||||| ||| |  | ||||||| ||||||||    
T  36186359 gtggcagtgattaagtagggagagggacgaaattttaaatgattaaacaatgcaaaggtaaattgtcaggattagcgatt--atagaccaa-ttttaaac 36186455  T
Q  476 gacccctaattgcaaggattaaat 499  Q
    ||||| ||||||||||||| ||||    
T  36186456 gacccttaattgcaaggatgaaat 36186479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 490
Target Start/End: Complemental strand, 37542334 - 37542246
Alignment:
Q  402 acgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaa 490  Q
    |||||||||||||||||||||   | ||||||||| |||| ||||||| ||| || || ||| |||||||||| ||| |||||||||||    
T  37542334 acgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattaaagggactaatttttaaatgacgcctaattgcaa 37542246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 404 - 499
Target Start/End: Original strand, 7295247 - 7295342
Alignment:
Q  404 gaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||| |||||||   | ||||  || ||||||||||||| |||||| || |||| |||||||||||| || ||||||||||||| ||||    
T  7295247 gaaattttaaacgattaaagaatgcaagactagtttgcaaggattagcgaatacagggaccgatttttaaacgatccataattgcaaggataaaat 7295342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 400 - 491
Target Start/End: Complemental strand, 25124675 - 25124584
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaag 491  Q
    |||||||||||||||||||||||   | ||||||||| |||| ||||||| ||| || |  ||| |||||||||| ||| ||||||||||||    
T  25124675 ggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacatggactaatttttaaatgacgcctaattgcaag 25124584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 375 - 421
Target Start/End: Original strand, 3041716 - 3041762
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaa 421  Q
    ||||||| |||||||| || |||||||||||||||||||||||||||    
T  3041716 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 3041762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 499
Target Start/End: Complemental strand, 16388650 - 16388596
Alignment:
Q  445 gattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||| |||||| ||  ||||||||||||||||||||||||||||||||| ||||    
T  16388650 gattagcgaatataggaaccaatttttaaacgacccctaattgcaaggatgaaat 16388596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 433 - 499
Target Start/End: Complemental strand, 30459450 - 30459384
Alignment:
Q  433 gtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||  ||||| | |||| |||||||||||||| |||||||| |||||| ||||    
T  30459450 gtaatttgcaaggattagtgaatacatagactaatttttaaacgacgcctaattgtaaggatgaaat 30459384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 375 - 421
Target Start/End: Original strand, 38845559 - 38845605
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaa 421  Q
    ||||||| |||||||| || |||||||||||||||||||||||||||    
T  38845559 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 38845605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 376 - 422
Target Start/End: Complemental strand, 38862754 - 38862708
Alignment:
Q  376 gtggcaatgattaagaggtgagagggacgaaattttaaatgattaaa 422  Q
    |||||| |||||||| || ||||||||||||||||||||||||||||    
T  38862754 gtggcagtgattaagtggggagagggacgaaattttaaatgattaaa 38862708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 375 - 421
Target Start/End: Original strand, 40775910 - 40775956
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaa 421  Q
    ||||||| |||||||| || |||||||||||||||||||||||||||    
T  40775910 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 40775956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 375 - 421
Target Start/End: Original strand, 44407117 - 44407163
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaa 421  Q
    ||||||| |||||||| || |||||||||||||||||||||||||||    
T  44407117 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 44407163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 375 - 492
Target Start/End: Complemental strand, 2266629 - 2266512
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || |||||||||||||||||||| ||||||   || || || |||  ||| ||||||| | | || |||||| ||||||||||    
T  2266629 cgtggcagtgattaagtggggagagggacgaaattttaaacgattaacaattgcagggttaaaatgccaggattagcaattacagagacgaatttttaaa 2266530  T
Q  475 cgacccctaattgcaagg 492  Q
     | | |||||||||||||    
T  2266529 tgccgcctaattgcaagg 2266512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 400 - 493
Target Start/End: Original strand, 15230245 - 15230338
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||   | ||||||||| |||  | ||||| ||| || || ||| |||||||||| ||| ||||||||||||||    
T  15230245 ggacgaaattttaaatgattaaacaatgcaagggtaaattgtcaagattagcgattacagggactaatttttaaatgacacctaattgcaagga 15230338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 400 - 493
Target Start/End: Original strand, 23507741 - 23507834
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||| |||||||||||||||||   || ||||||||| |||||||||||| | | || || |||  ||||||||| ||| ||||||||||||||    
T  23507741 ggaccaaattttaaatgattaacaattgcaagggtaaattgcaaggattagcaattacagggacgtatttttaaatgacgcctaattgcaagga 23507834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 404 - 499
Target Start/End: Complemental strand, 34176549 - 34176458
Alignment:
Q  404 gaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||   | ||||  || |||||||||||||||||||| |   |||||||||||||||| || ||||||||||||| ||||    
T  34176549 gaaattttaaatgattaaagaatgcaagactagtttgcaaggattaacgaatata---accaatttttaaacga-ccataattgcaaggatgaaat 34176458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 400 - 493
Target Start/End: Original strand, 35634413 - 35634506
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||   | ||||||||| |||  ||||||| ||| || || ||| |||||||||| ||| | ||||||||||||    
T  35634413 ggacgaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacagggactaatttttaaatgacgcttaattgcaagga 35634506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 443 - 499
Target Start/End: Complemental strand, 9065734 - 9065678
Alignment:
Q  443 aggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||| || || |||||||||||||||||||||||||| ||| ||| ||||    
T  9065734 aggattaacgattatagggaccaatttttaaacgacccctaattacaaagatgaaat 9065678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 395 - 483
Target Start/End: Complemental strand, 20050200 - 20050112
Alignment:
Q  395 gagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgaccccta 483  Q
    ||||||||||||||||||| ||||||||||||   |||| ||  ||| || ||||| ||||| |  |||||||||||||| ||||||||    
T  20050200 gagagggacgaaattttaagtgattaaattttggcagggcaaaatgccagaattaaggaatacatggaccaatttttaaatgaccccta 20050112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 401 - 493
Target Start/End: Complemental strand, 41353685 - 41353593
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    ||||||||||||||||||||||   | ||||||||| |||  ||||||| ||| || ||| || |||||||||| ||| |||||||| |||||    
T  41353685 gacgaaattttaaatgattaaacaatgcaagggtaaattgttaggattagcgattacagaaactaatttttaaatgacgcctaattgtaagga 41353593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 453
Target Start/End: Original strand, 8747578 - 8747633
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacga 453  Q
    ||||||||||||||||||||||||  ||| ||||||||||||   |||||||||||    
T  8747578 agggacgaaattttaaatgattaatgtttgcaagggtaatttttcaggattaacga 8747633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 498
Target Start/End: Original strand, 31873198 - 31873313
Alignment:
Q  383 tgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccct 482  Q
    |||||||| ||  ||||| || ||||||||||||||||||||||   |||| || |||| | |||||||||||| |  ||||| |||||||| ||||| |    
T  31873198 tgattaagtgggaagaggaacaaaattttaaatgattaaattttgggagggcaaattgccaagattaacgaataaaaggaccattttttaaatgacccat 31873297  T
Q  483 aattgcaaggattaaa 498  Q
    | ||||| ||| ||||    
T  31873298 atttgcagggactaaa 31873313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 401 - 491
Target Start/End: Complemental strand, 22915500 - 22915410
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaag 491  Q
    ||||||||| |||||||||||   || ||||| || ||||||||||||| ||| || |  |||||||||||||| || | |||||||||||    
T  22915500 gacgaaattgtaaatgattaatgattgcaaggctagtttgcaaggattagcgattacatggaccaatttttaaatgatctctaattgcaag 22915410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 397 - 499
Target Start/End: Complemental strand, 34060604 - 34060502
Alignment:
Q  397 gagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggatta 496  Q
    |||||| ||| |||||||||||||||   | ||| |  ||||||||||||||| ||| || |  ||||||||||||||||||   ||||||||||||| |    
T  34060604 gagggatgaagttttaaatgattaaagaatgcaacgacaatttgcaaggattagcgattacatggaccaatttttaaacgacgtttaattgcaaggatga 34060505  T
Q  497 aat 499  Q
    |||    
T  34060504 aat 34060502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 437 - 499
Target Start/End: Complemental strand, 36186176 - 36186114
Alignment:
Q  437 tttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||| |||||| || |||||| ||||||| ||||||||||| ||| ||| ||||    
T  36186176 tttgcaaggattagcgaatacagggaccaaattttaaaagacccctaattacaaagatgaaat 36186114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 490
Target Start/End: Complemental strand, 9337141 - 9337048
Alignment:
Q  397 gagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaa 490  Q
    ||||||| || | ||||||||||||| |||  ||||||||||||| |  |||||||| || |  |||||||||| ||| |||| ||||||||||    
T  9337141 gagggaccaattcttaaatgattaaactttgaaagggtaatttgccaaaattaacgattacaaggaccaattttaaaatgacctctaattgcaa 9337048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 493
Target Start/End: Original strand, 11674979 - 11675072
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||| |||||||||||||||||   || ||||| ||| |||| ||||||| | | || || ||| |||||||||| ||| ||||||||||||||    
T  11674979 ggaccaaattttaaatgattaacaattgcaaggctaaattgccaggattagcaattacagggacgaatttttaaatgacgcctaattgcaagga 11675072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 421
Target Start/End: Original strand, 12199211 - 12199256
Alignment:
Q  376 gtggcaatgattaagaggtgagagggacgaaattttaaatgattaa 421  Q
    |||||| |||||||| || ||||| |||||||||||||||||||||    
T  12199211 gtggcagtgattaagtggggagagagacgaaattttaaatgattaa 12199256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 421
Target Start/End: Original strand, 12443639 - 12443684
Alignment:
Q  376 gtggcaatgattaagaggtgagagggacgaaattttaaatgattaa 421  Q
    |||||| |||||||| || ||||| |||||||||||||||||||||    
T  12443639 gtggcagtgattaagtggggagagagacgaaattttaaatgattaa 12443684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 486
Target Start/End: Original strand, 43181465 - 43181554
Alignment:
Q  397 gagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaatt 486  Q
    |||| |||||||||||||||||||||   |  |||| |||||| ||||||||||||| |  |  || |||||||||||||| ||||||||    
T  43181465 gaggaacgaaattttaaatgattaaacaatgtaaggctaatttacaaggattaacgattgcatggatcaatttttaaacgatccctaatt 43181554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #90
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 377 - 421
Target Start/End: Original strand, 35449871 - 35449915
Alignment:
Q  377 tggcaatgattaagaggtgagagggacgaaattttaaatgattaa 421  Q
    ||||| |||||||  || |||||||||||||||||||||||||||    
T  35449871 tggcagtgattaaatggggagagggacgaaattttaaatgattaa 35449915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 5e-33; HSPs: 92)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 371 - 499
Target Start/End: Original strand, 23458266 - 23458394
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    |||| |||||| |||||||| || ||||||||||||||||||||||||||||   | ||||||||| |||||||||||| ||| || |||||||||||||    
T  23458266 gtgatgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgcaaggattagcgattacagagaccaatttt 23458365  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    |||||||||| ||||||||||||| ||||    
T  23458366 taaacgacccataattgcaaggatgaaat 23458394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 375 - 499
Target Start/End: Complemental strand, 2796316 - 2796192
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || ||||||||||||||||||||||||||||   | ||||||||| |||| ||||||| ||| || || ||||||||||||||    
T  2796316 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagggaccaatttttaaa 2796217  T
Q  475 cgacccctaattgcaaggattaaat 499  Q
     ||||||||||||||||||| ||||    
T  2796216 tgacccctaattgcaaggatcaaat 2796192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 383 - 499
Target Start/End: Original strand, 9294257 - 9294373
Alignment:
Q  383 tgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccct 482  Q
    |||||||| || ||||||||||||||||||||||||||||   | ||||||||| |||| ||||||| ||| || || ||||||||||||||||||||||    
T  9294257 tgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattatagggaccaatttttaaacgacccct 9294356  T
Q  483 aattgcaaggattaaat 499  Q
    |||||||||||| ||||    
T  9294357 aattgcaaggatgaaat 9294373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 375 - 499
Target Start/End: Original strand, 19741183 - 19741307
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || ||||| ||||||||||||||||||||||   ||||||||||| |||| | ||||| ||| || || ||||||||||||||    
T  19741183 cgtggcagtgattaagtggggagagtgacgaaattttaaatgattaaacaatacaagggtaaattgccaagattagcgattacagggaccaatttttaaa 19741282  T
Q  475 cgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||| ||||    
T  19741283 cgacccctaattgcaaggatcaaat 19741307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 371 - 499
Target Start/End: Original strand, 33689666 - 33689794
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||||||||| |||||||| || |||||||||||||||||||||||||||||  | ||||||||| |||| ||||||| ||| || |   |||||||||    
T  33689666 gtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaataatgcaagggtaaattgccaggattagcgattacatgaaccaatttt 33689765  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||| ||| ||||    
T  33689766 taaacgacccctaattgcaaagatgaaat 33689794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 371 - 499
Target Start/End: Complemental strand, 9367882 - 9367754
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||||||||| |||||||  ||   |||||||||||||||||||||||||   || ||||| || ||||||||||||| |||||| |||||||| ||||    
T  9367882 gtgacgtggcagtgattaattgggatgagggacgaaattttaaatgattaataattgcaaggctagtttgcaaggattagcgaatacagagaccattttt 9367783  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||| | |||||||||    
T  9367782 taaacgacccctaattgtagggattaaat 9367754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 400 - 499
Target Start/End: Complemental strand, 23458091 - 23457992
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||||| | || ||||| || ||||||||||||| |||||| || |||||||||||||||||||| ||||||||||||| ||||    
T  23458091 ggacgaaattttaaatgattaattattgcaaggctagtttgcaaggattagcgaatacagggaccaatttttaaacgacccttaattgcaaggatgaaat 23457992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 397 - 494
Target Start/End: Complemental strand, 25107328 - 25107231
Alignment:
Q  397 gagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggat 494  Q
    |||||||||||||||||||||||||  ||| || ||| ||||||| ||||||| ||| |||||||||||||||||||| |||||||||||||| ||||    
T  25107328 gagggacgaaattttaaatgattaacatttgcaggggcaatttgccaggattagcgattagagagaccaatttttaaatgacccctaattgcagggat 25107231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 383 - 499
Target Start/End: Original strand, 40033755 - 40033871
Alignment:
Q  383 tgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccct 482  Q
    |||||||| || ||||||||| ||||||||||||||||||   | ||||||||| |||| ||||||| | | || ||| |||||||||||||||||||||    
T  40033755 tgattaagtggggagagggacaaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcaattatagaaaccaatttttaaacgacccct 40033854  T
Q  483 aattgcaaggattaaat 499  Q
    |||||||||||| ||||    
T  40033855 aattgcaaggatgaaat 40033871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 371 - 499
Target Start/End: Original strand, 51994173 - 51994301
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||||||||| |||||||| || ||||||||||||||||||||||||||||   | || |||||| |||| || |||| ||| || |  ||||||||||    
T  51994173 gtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaggggtaaattgccagaattagcgattacaaggaccaatttt 51994272  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    ||||||| |||||||||||||||| ||||    
T  51994273 taaacgatccctaattgcaaggatcaaat 51994301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 399 - 494
Target Start/End: Original strand, 1079536 - 1079631
Alignment:
Q  399 gggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggat 494  Q
    |||||||||||||||| ||||||| ||| ||||| |||||||| ||||||||||| || || |||||||||||||| |||||||||||||| ||||    
T  1079536 gggacgaaattttaaaagattaaactttgcaaggctaatttgccaggattaacgattacagggaccaatttttaaatgacccctaattgcagggat 1079631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 398 - 489
Target Start/End: Original strand, 43608796 - 43608887
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgca 489  Q
    ||||||||||||||||||||||||| ||| ||||| |||||| | ||||||||||| || ||||||||||||||||| || |||||||||||    
T  43608796 agggacgaaattttaaatgattaaactttgcaaggttaatttacgaggattaacgattacagagaccaatttttaaatgatccctaattgca 43608887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 375 - 493
Target Start/End: Original strand, 36314558 - 36314676
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || |||||||||||||||||||||||||||   || ||||| ||| |||| ||||||||| | || || ||| ||||||||||    
T  36314558 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaacaattgcaaggctaaattgccaggattaacaattacagggacgaatttttaaa 36314657  T
Q  475 cgacccctaattgcaagga 493  Q
    |||| ||||||||||||||    
T  36314658 cgacgcctaattgcaagga 36314676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 400 - 494
Target Start/End: Complemental strand, 36417800 - 36417706
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggat 494  Q
    ||||||||||||||||||||||   || ||||| || ||||||||||||| |||||| || |||||||||||||||||||||||||| |||||||    
T  36417800 ggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattacaaggat 36417706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 377 - 499
Target Start/End: Complemental strand, 46474950 - 46474828
Alignment:
Q  377 tggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacg 476  Q
    ||||| |||||||| || ||||||||| ||||||||||||||||||   | ||| ||||| |||| | ||||| ||| || |||||||||||||||||||    
T  46474950 tggcagtgattaagtggggagagggacaaaattttaaatgattaaacaatgcaatggtaaattgccaagattagcgattacagagaccaatttttaaacg 46474851  T
Q  477 acccctaattgcaaggattaaat 499  Q
    |||||||||||||| ||| ||||    
T  46474850 acccctaattgcaaagatgaaat 46474828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 375 - 493
Target Start/End: Original strand, 48322637 - 48322755
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || |||||||||||||||||||||||||||   || ||||| ||| |||| ||||||||| | || || ||| ||||||||||    
T  48322637 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaacaattgcaaggctaaattgccaggattaacaattacagggacgaatttttaaa 48322736  T
Q  475 cgacccctaattgcaagga 493  Q
    |||| ||||||||||||||    
T  48322737 cgacgcctaattgcaagga 48322755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 372 - 493
Target Start/End: Original strand, 9368589 - 9368710
Alignment:
Q  372 tgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaattttt 471  Q
    |||||||||||| |||||| ||    ||| |||||||||||||||||||||   |  ||| |||||||||||||||||| || || || |||||||||||    
T  9368589 tgacgtggcaatcattaagtgggttaaggaacgaaattttaaatgattaaacaatgtaagagtaatttgcaaggattaatgattacagggaccaattttt 9368688  T
Q  472 aaacgacccctaattgcaagga 493  Q
    ||||||||||||||||||||||    
T  9368689 aaacgacccctaattgcaagga 9368710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 398 - 489
Target Start/End: Complemental strand, 1078650 - 1078560
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgca 489  Q
    ||||||||||||||||||||||||| ||||||||| |||||| | | ||||||||| || || |||||||||||||| ||||||||||||||    
T  1078650 agggacgaaattttaaatgattaaactttacaaggttaatttacca-gattaacgattacagggaccaatttttaaatgacccctaattgca 1078560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 398 - 489
Target Start/End: Complemental strand, 6956362 - 6956271
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgca 489  Q
    |||||||||||||||||||||| || ||| |||||||||||||| ||||||||||| || || ||| |||||||||| || |||||||||||    
T  6956362 agggacgaaattttaaatgatttaagtttgcaagggtaatttgccaggattaacgattatagggactaatttttaaatgatccctaattgca 6956271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 398 - 489
Target Start/End: Original strand, 21186009 - 21186100
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgca 489  Q
    ||||||||||||||||||||||||  ||| |||||||||||||| ||||||||||| || |   ||||||||||||| ||||||||||||||    
T  21186009 agggacgaaattttaaatgattaaggtttgcaagggtaatttgccaggattaacgattacatgtaccaatttttaaatgacccctaattgca 21186100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 397 - 488
Target Start/End: Original strand, 21783808 - 21783899
Alignment:
Q  397 gagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgc 488  Q
    |||| ||||||||||||||||||||||||| || || |||  |||||||||||||||||| |  ||| ||||||||||||||||||||||||    
T  21783808 gaggaacgaaattttaaatgattaaattttgcagggataaaatgcaaggattaacgaatataaggactaatttttaaacgacccctaattgc 21783899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 36418004 - 36418103
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||| || ||||||||||||| |||||| ||  ||||||||||||||||||||||||| ||||||| ||||    
T  36418004 ggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacaggaaccaatttttaaacgacccctaattacaaggatgaaat 36418103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 40758426 - 40758525
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||  || ||||||||||||| |||||| | ||||||||||||||| ||||||||||||||||||| ||||    
T  40758426 ggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgaatacatagaccaatttttaaatgacccctaattgcaaggatgaaat 40758525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 43384599 - 43384698
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||| |||   || ||||| || |||||||||||||||||||| |||||| |||||||||||||  ||||||||||||||| ||||    
T  43384599 ggacgaaattttaaatgactaatgattgcaaggctagtttgcaaggattaacgaatatagagacaaatttttaaacgattcctaattgcaaggatgaaat 43384698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 400 - 494
Target Start/End: Complemental strand, 3849143 - 3849049
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggat 494  Q
    ||||||||||||||||||||||   || || || || |||||||||||||||||||| || |||||||||||||||||| |||||||||| ||||    
T  3849143 ggacgaaattttaaatgattaatgattgcagggctagtttgcaaggattaacgaatacagggaccaatttttaaacgactcctaattgcagggat 3849049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 371 - 499
Target Start/End: Complemental strand, 40758285 - 40758160
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||||||| | |||||||| || ||||||||||||||||||||||||||||   | |  |||||| |||| ||||||| ||| || |  ||||||||||    
T  40758285 gtgacgtggtagtgattaagtggggagagggacgaaattttaaatgattaaacaatgc--gggtaaattgc-aggattagcgattacatggaccaatttt 40758189  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||||||| ||||    
T  40758188 taaacgacccctaattgcaaggatgaaat 40758160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 397 - 489
Target Start/End: Complemental strand, 33154992 - 33154900
Alignment:
Q  397 gagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgca 489  Q
    ||||||| || | ||||||||||||| ||||||||| |||||||  ||||||||||| || || |||||||||||||| ||||||||||||||    
T  33154992 gagggaccaattcttaaatgattaaactttacaaggataatttgtcaggattaacgattacagggaccaatttttaaatgacccctaattgca 33154900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 400 - 499
Target Start/End: Complemental strand, 26463744 - 26463645
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||  |||||||||||||||| |||||| |  || ||||||||||||||||| ||||||||||||| ||||    
T  26463744 ggacgaaattttaaatgattaatgattgcaagactaatttgcaaggattaccgaatacaaggatcaatttttaaacgacccttaattgcaaggatgaaat 26463645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 375 - 493
Target Start/End: Original strand, 10770751 - 10770869
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || |||||||||||||||||||||||||||   || ||||| ||| |||| ||||||||| | || || ||| ||||||||||    
T  10770751 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaacaattgcaaggctaaattgccaggattaacaattacagggacgaatttttaaa 10770850  T
Q  475 cgacccctaattgcaagga 493  Q
     ||| |||||||| |||||    
T  10770851 tgacgcctaattgtaagga 10770869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 372 - 486
Target Start/End: Original strand, 32431480 - 32431594
Alignment:
Q  372 tgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaattttt 471  Q
    |||||||||||| |||||| ||    ||||||||||||||||||| ||||| ||| ||||| |||||||  ||||||||||| |  || |||||||||||    
T  32431480 tgacgtggcaatcattaagcgggtcaagggacgaaattttaaatggttaaactttgcaaggctaatttgtcaggattaacgattgcagggaccaattttt 32431579  T
Q  472 aaacgacccctaatt 486  Q
    ||| |||||||||||    
T  32431580 aaatgacccctaatt 32431594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 371 - 493
Target Start/End: Original strand, 33156281 - 33156403
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||||||||| |||||||| || | ||||||||||||||||||||||||||   |  |||||||| |||| | ||||||||| || |  ||| ||||||    
T  33156281 gtgacgtggcagtgattaagtggggggagggacgaaattttaaatgattaaacaatgaaagggtaaattgccaagattaacgattacaatgactaatttt 33156380  T
Q  471 taaacgacccctaattgcaagga 493  Q
    |||| ||| ||||||||||||||    
T  33156381 taaatgacgcctaattgcaagga 33156403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 400 - 489
Target Start/End: Complemental strand, 19741035 - 19740946
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgca 489  Q
    ||||||||||||||||||||||   || ||||| || ||||||||||||| ||| || || ||||||||||||||||| |||||||||||    
T  19741035 ggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgattacagggaccaatttttaaacgatccctaattgca 19740946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 372 - 499
Target Start/End: Original strand, 3850415 - 3850542
Alignment:
Q  372 tgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaattttt 471  Q
    |||||||||| ||||||| | |   |||||||||||||||||| ||||||   || ||  | || ||| ||||||||| |||||| || |||||||||||    
T  3850415 tgacgtggcagtgattaacaaggatgagggacgaaattttaaacgattaatgattgcagagctagtttccaaggattatcgaatacagggaccaattttt 3850514  T
Q  472 aaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||| |||| ||||    
T  3850515 aaacgacccctaattgcagggatgaaat 3850542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 400 - 499
Target Start/End: Complemental strand, 33689493 - 33689395
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||| |||||||||||||||||   || ||||| || |||||||| |||| |||||| |  |||||||||||||||||||||||||||||||||| ||||    
T  33689493 ggacaaaattttaaatgattaatgattgcaaggctagtttgcaagaattagcgaatacat-gaccaatttttaaacgacccctaattgcaaggatgaaat 33689395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 41558198 - 41558297
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||  |||||||||||||||| |||||| |  ||  ||||||||||||||||||||||||| |||| ||||    
T  41558198 ggacgaaattttaaatgattaatgattgcaagactaatttgcaaggattagcgaatacatggattaatttttaaacgacccctaattgcagggatgaaat 41558297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 396 - 499
Target Start/End: Complemental strand, 42342907 - 42342804
Alignment:
Q  396 agagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggatt 495  Q
    |||||||||||||||||||||||||||   | ||||||||| |||| |||| || | | || |  ||||||||||||||||||||||||||| ||||||     
T  42342907 agagggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggactagcaattacatggaccaatttttaaacgacccctaattgtaaggatg 42342808  T
Q  496 aaat 499  Q
    ||||    
T  42342807 aaat 42342804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 46475097 - 46475195
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||| || ||||||||||||| |||||| ||  | |||||||||||||||||||||||| |||||| ||||    
T  46475097 ggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacag-tatcaatttttaaacgacccctaattgtaaggatgaaat 46475195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 400 - 491
Target Start/End: Original strand, 53757039 - 53757130
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaag 491  Q
    ||||||||||||||||||||||   || ||||| || ||||||||||||| |||||| |  ||||||||||||||||||  |||||||||||    
T  53757039 ggacgaaattttaaatgattaatgattgcaaggttagtttgcaaggattagcgaatacatggaccaatttttaaacgacttctaattgcaag 53757130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 401 - 491
Target Start/End: Complemental strand, 41558119 - 41558029
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaag 491  Q
    |||||||||||||||||||||   || ||||| |||| ||||||||||| |||||| |   ||||||||||||||||||| ||||||||||    
T  41558119 gacgaaattttaaatgattaataattgcaaggttaatgtgcaaggattagcgaatacaagtaccaatttttaaacgacccataattgcaag 41558029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 397 - 494
Target Start/End: Original strand, 23276296 - 23276393
Alignment:
Q  397 gagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggat 494  Q
    ||||||| |||||||||||||||||  |||  | |||||||||||  |||||| ||| || || |||||||||||||| |||||||||||||| ||||    
T  23276296 gagggacaaaattttaaatgattaacgtttgtaggggtaatttgccgggattagcgattacagggaccaatttttaaatgacccctaattgcagggat 23276393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 401 - 486
Target Start/End: Original strand, 47857562 - 47857647
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaatt 486  Q
    |||||||||||||||||||||| ||| ||||| |||||| | || |||||||| || | ||| ||||||||||||||| |||||||    
T  47857562 gacgaaattttaaatgattaaactttgcaaggataatttaccagaattaacgattacaaagatcaatttttaaacgacacctaatt 47857647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 405 - 489
Target Start/End: Complemental strand, 47856494 - 47856410
Alignment:
Q  405 aaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgca 489  Q
    |||||||||||||||||| ||| |||| ||||||||  ||||||||||| || |  |||||||||||||||||| | ||||||||    
T  47856494 aaattttaaatgattaaactttgcaagagtaatttgtcaggattaacgattacaaggaccaatttttaaacgacgcttaattgca 47856410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 42343047 - 42343146
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||  |||||||||| ||||| |||||| |  || ||||||||||||||||| ||||| ||||||| ||||    
T  42343047 ggacgaaattttaaatgattaatcattgcaagactaatttgcaaagattagcgaatacatggatcaatttttaaacgacccttaattacaaggatgaaat 42343146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 383 - 490
Target Start/End: Complemental strand, 43384412 - 43384305
Alignment:
Q  383 tgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccct 482  Q
    |||||||| || ||||| ||||||||||||||||||||||   | ||||||||| |||  ||||||| ||| || || |||||||||||||| || || |    
T  43384412 tgattaagtggggagagagacgaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacagggaccaatttttaaaggatccgt 43384313  T
Q  483 aattgcaa 490  Q
    ||||||||    
T  43384312 aattgcaa 43384305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 371 - 436
Target Start/End: Original strand, 26463885 - 26463950
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaa 436  Q
    |||||||| || |||||||| || ||||||||||||||||||||||||||||   |||||||||||    
T  26463885 gtgacgtgacagtgattaagtggggagagggacgaaattttaaatgattaaacaatacaagggtaa 26463950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 400 - 493
Target Start/End: Original strand, 29118852 - 29118945
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||   | ||| ||||| |||| ||||||| ||| || || ||| |||||||||| ||| ||||||||||||||    
T  29118852 ggacgaaattttaaatgattaaacaatgcaatggtaaattgccaggattagcgattacagtgactaatttttaaatgacgcctaattgcaagga 29118945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 446 - 499
Target Start/End: Original strand, 34142580 - 34142633
Alignment:
Q  446 attaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||| || || |||||||||||||||||||||||||||||||||| ||||    
T  34142580 attaacgattacagggaccaatttttaaacgacccctaattgcaaggatcaaat 34142633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 400 - 493
Target Start/End: Complemental strand, 35643963 - 35643870
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||   | || |||||| |||| ||||||| ||| || || ||| |||||||||| ||| ||||||||||||||    
T  35643963 ggacgaaattttaaatgattaaacaatgcacgggtaaattgccaggattagcgattacagggactaatttttaaatgacgcctaattgcaagga 35643870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 395 - 499
Target Start/End: Original strand, 40506098 - 40506203
Alignment:
Q  395 gagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccc-taattgcaagga 493  Q
    ||||| |||||||||||||||||||||||  |  |||||||| |||  ||||||||||| || ||  ||||| ||||||| |||||| ||||||||||||    
T  40506098 gagagagacgaaattttaaatgattaaataatgtaagggtaaattgtcaggattaacgattacaggaaccaacttttaaatgaccccataattgcaagga 40506197  T
Q  494 ttaaat 499  Q
    | ||||    
T  40506198 tgaaat 40506203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 375 - 492
Target Start/End: Complemental strand, 54466560 - 54466443
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || |||||||||||||||||||||||||||   || || || |||  ||| ||||||||| | || || ||| ||||||||||    
T  54466560 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaacaattgcagggttaaaatgccaggattaacaattacagggacgaatttttaaa 54466461  T
Q  475 cgacccctaattgcaagg 492  Q
     | | |||||||||||||    
T  54466460 tgccgcctaattgcaagg 54466443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 438 - 499
Target Start/End: Complemental strand, 55052366 - 55052305
Alignment:
Q  438 ttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||| |||||| ||||||||||||||| |||||||||||||  |||||| ||||    
T  55052366 ttgcaaggattagcgaatacagagaccaatttttagacgacccctaattataaggatcaaat 55052305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 401 - 489
Target Start/End: Original strand, 4323519 - 4323607
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgca 489  Q
    |||||| |||||||||||||||   | ||||| |||||||| ||||||| ||| || || ||| |||||||||||||| ||||||||||    
T  4323519 gacgaatttttaaatgattaaacaatgcaaggttaatttgccaggattagcgattacagggacgaatttttaaacgacgcctaattgca 4323607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 401 - 493
Target Start/End: Original strand, 32306739 - 32306831
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    ||||||||||||||||||||||   | ||||||||| |||| ||||||| ||| || |  ||| |||||||||| ||| ||||||||||||||    
T  32306739 gacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacattgactaatttttaaatgacgcctaattgcaagga 32306831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 443 - 499
Target Start/End: Complemental strand, 36150596 - 36150540
Alignment:
Q  443 aggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||| |||| |  |||||||||||||||||||||||||||||||||| ||||    
T  36150596 aggattaacaaatataaggaccaatttttaaacgacccctaattgcaaggatgaaat 36150540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 492
Target Start/End: Original strand, 42855625 - 42855713
Alignment:
Q  404 gaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagg 492  Q
    |||||||||||||||||||   | ||||| || ||||||||||||| |||||| |  ||| |||||||||| ||| |||||||||||||    
T  42855625 gaaattttaaatgattaaagaatgcaaggctagtttgcaaggattagcgaatacatggactaatttttaaatgacgcctaattgcaagg 42855713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 371 - 499
Target Start/End: Complemental strand, 53756885 - 53756757
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||| || ||||||||||  ||  ||| |||||||||||||||||||||||   | ||||||||| || | | ||||||||| || |   | |||||||    
T  53756885 gtgacatgacaatgattaaatgggaagatggacgaaattttaaatgattaaacaatgcaagggtaaattactaagattaacgattacatgaatcaatttt 53756786  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||| ||| ||||    
T  53756785 taaacgacccctaattgcaaagatgaaat 53756757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 30380987 - 30380932
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaatttt 426  Q
    ||||||||||| |||| ||| ||  |||||||||||||||||||||||||||||||    
T  30380987 gtgacgtggcagtgatcaagtggacagagggacgaaattttaaatgattaaatttt 30380932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 375 - 421
Target Start/End: Complemental strand, 8041753 - 8041707
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaa 421  Q
    ||||||| |||||||| || |||||||||||||||||||||||||||    
T  8041753 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 8041707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 474
Target Start/End: Original strand, 10307689 - 10307763
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    |||||||||||||||||||||||   | ||||||||| |||| ||||||| ||| || |||||| ||||||||||    
T  10307689 ggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagagactaatttttaaa 10307763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 376 - 498
Target Start/End: Original strand, 14634044 - 14634166
Alignment:
Q  376 gtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaac 475  Q
    |||||| |||||||| || |||| |||||||| ||| | ||||||||||||   |||| ||  |||   |||||| ||||| || ||||||||||||||     
T  14634044 gtggcagtgattaagtggggagaaggacgaaagttttagtgattaaattttggcagggcaaaatgcctcgattaaggaatacagggaccaatttttaaat 14634143  T
Q  476 gacccctaattgcaaggattaaa 498  Q
    |||||||| ||||||||| ||||    
T  14634144 gacccctatttgcaaggactaaa 14634166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 480
Target Start/End: Complemental strand, 41988698 - 41988616
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgaccc 480  Q
    |||||||||| ||||||||||||||   | |||| |||||||||||| ||||  ||||| || |||||||||||||| |||||    
T  41988698 agggacgaaaatttaaatgattaaagaatgcaagagtaatttgcaagaattagtgaatacagggaccaatttttaaatgaccc 41988616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 441
Target Start/End: Complemental strand, 42854552 - 42854506
Alignment:
Q  395 gagagggacgaaattttaaatgattaaattttacaagggtaatttgc 441  Q
    ||||| |||||||||||||||||||||||||| ||| ||||||||||    
T  42854552 gagagagacgaaattttaaatgattaaattttgcaaaggtaatttgc 42854506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 400 - 493
Target Start/End: Original strand, 3469514 - 3469607
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    ||||| |||||||||||||||||   | ||||||||| |||| ||||||| ||| || ||  || |||||||||| ||| ||||||||||||||    
T  3469514 ggacggaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacaggaactaatttttaaatgacgcctaattgcaagga 3469607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 400 - 493
Target Start/End: Complemental strand, 10294679 - 10294586
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||   ||||||||||| |||  | ||||| | | || || ||| |||||||||| ||| ||||||||||||||    
T  10294679 ggacgaaattttaaatgattaaacaatacaagggtaaattgtcatgattagcaattacagggactaatttttaaatgacgcctaattgcaagga 10294586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 400 - 493
Target Start/End: Complemental strand, 11910811 - 11910718
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||   | ||||||||| |||| ||||||| ||| || || ||  |||||||||| |||  |||||||||||||    
T  11910811 ggacgaaattttaaatgattaaacaatgcaagggtaaattgctaggattagcgattacagggattaatttttaaatgacgtctaattgcaagga 11910718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 397 - 450
Target Start/End: Original strand, 26718760 - 26718813
Alignment:
Q  397 gagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaa 450  Q
    ||||||| || ||||||||||||||| |||||||||||||||||| || |||||    
T  26718760 gagggaccaatttttaaatgattaaactttacaagggtaatttgccagaattaa 26718813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 372 - 429
Target Start/End: Complemental strand, 29192175 - 29192118
Alignment:
Q  372 tgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttaca 429  Q
    |||||||||| |||||||  ||  |||||||||||||||||||||||||| |||||||    
T  29192175 tgacgtggcagtgattaatcgggaagagggacgaaattttaaatgattaatttttaca 29192118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 438 - 499
Target Start/End: Complemental strand, 35712118 - 35712057
Alignment:
Q  438 ttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||| |||||| |  |||||||||||||| || |||||||||||||||| ||||    
T  35712118 ttgcaaggattagcgaatacatggaccaatttttaaatgatccctaattgcaaggatgaaat 35712057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 404 - 493
Target Start/End: Original strand, 37778591 - 37778680
Alignment:
Q  404 gaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||   | ||||||||| |||| ||||||| | | || || ||| |||||||||| ||| ||||||||||||||    
T  37778591 gaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcaattacagggactaatttttaaatgacgcctaattgcaagga 37778680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 400 - 493
Target Start/End: Original strand, 40788734 - 40788827
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    ||||||||||||||| |||||||   | |||| |||| |||| ||||||| ||| || || ||| |||||||||| ||| ||||||||||||||    
T  40788734 ggacgaaattttaaaagattaaacaatgcaagagtaaattgccaggattagcgattacagggactaatttttaaatgacgcctaattgcaagga 40788827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 442 - 499
Target Start/End: Complemental strand, 51994034 - 51993977
Alignment:
Q  442 aaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||| |||||| || ||||||||||||||||||| |||||||||| ||| ||||    
T  51994034 aaggattagcgaatacagggaccaatttttaaacgacctctaattgcaaagatcaaat 51993977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 400 - 493
Target Start/End: Complemental strand, 52032250 - 52032157
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||   | ||||||||| |||| ||||||| ||| || |  ||  |||||||||| ||| ||||||||||||||    
T  52032250 ggacgaaattttaaatgattaaacaatgcaagggtaaattgctaggattagcgattacaaggattaatttttaaatgacgcctaattgcaagga 52032157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 494
Target Start/End: Original strand, 25108374 - 25108505
Alignment:
Q  363 gctaatcggtgacgtggcaatgattaagaggtga-gagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagag 461  Q
    ||||||| ||||||||||| |||||||  | ||| || ||||||||||||||||||||||  ||| || ||  | ||||| ||||||| | | || || |    
T  25108374 gctaatcagtgacgtggcagtgattaactg-tgatgaaggacgaaattttaaatgattaacgtttgcagggacagtttgccaggattagcaattacaggg 25108472  T
Q  462 accaatttttaaacgacccctaattgcaaggat 494  Q
    ||||| ||||||| |||||||||||||| ||||    
T  25108473 accaaattttaaatgacccctaattgcagggat 25108505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 396 - 436
Target Start/End: Complemental strand, 32716365 - 32716325
Alignment:
Q  396 agagggacgaaattttaaatgattaaattttacaagggtaa 436  Q
    ||||||||||||||||||||| |||| ||||||||||||||    
T  32716365 agagggacgaaattttaaatggttaatttttacaagggtaa 32716325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 395 - 499
Target Start/End: Original strand, 55052559 - 55052662
Alignment:
Q  395 gagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggat 494  Q
    ||||||||||||||||||||||||||||   | ||  ||||| |||| | ||||||||| || |  ||||||||||||||  |||||||||| |||||||    
T  55052559 gagagggacgaaattttaaatgattaaacaatgcagaggtaaattgccatgattaacgattacatggaccaatttttaaa-aacccctaattacaaggat 55052657  T
Q  495 taaat 499  Q
     ||||    
T  55052658 caaat 55052662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 489
Target Start/End: Complemental strand, 4322705 - 4322615
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgca 489  Q
    ||||||||| |||||||||||||||   | ||||| |||||||  ||||||| ||| || || ||| |||||||||||||| ||||||||||    
T  4322705 agggacgaatttttaaatgattaaacaatgcaaggttaatttgtcaggattagcgattacag-gacgaatttttaaacgacgcctaattgca 4322615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 493
Target Start/End: Complemental strand, 29686051 - 29685960
Alignment:
Q  402 acgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||   | ||||| ||| |||  ||||||| ||| || || ||| |||||||||| ||| ||||||||||||||    
T  29686051 acgaaattttaaatgattaaacaatgcaaggataaattgtcaggattagcgattacagggactaatttttaaatgacgcctaattgcaagga 29685960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 39399379 - 39399434
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaatttt 426  Q
    ||||||||||| |||||||  || ||||| || |||||||||||||||||||||||    
T  39399379 gtgacgtggcagtgattaactggggagagagatgaaattttaaatgattaaatttt 39399434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 41988103 - 41988048
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaatttt 426  Q
    |||| |||||| |||||||| |  ||||| ||||||||||||||||||||||||||    
T  41988103 gtgatgtggcagtgattaagtgaggagagagacgaaattttaaatgattaaatttt 41988048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 44654790 - 44654845
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaatttt 426  Q
    |||||||| || |||||||  || ||||||||||||||||||| ||||||||||||    
T  44654790 gtgacgtgacagtgattaaatggggagagggacgaaattttaagtgattaaatttt 44654845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 54317918 - 54317973
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaatttt 426  Q
    ||||||||||| |||||||   | ||||| ||||||||||||||||||||||||||    
T  54317918 gtgacgtggcagtgattaattagggagagagacgaaattttaaatgattaaatttt 54317973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 400 - 490
Target Start/End: Complemental strand, 3469312 - 3469222
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaa 490  Q
    |||||||||||||||||||||||   | ||||||||| |||| |||||||  || || |  ||| |||||||||| ||| |||||||||||    
T  3469312 ggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagtgattacatggactaatttttaaatgacgcctaattgcaa 3469222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 461 - 499
Target Start/End: Complemental strand, 9292294 - 9292256
Alignment:
Q  461 gaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||| |||||||||||||||| ||||    
T  9292294 gaccaatttttaaacgatccctaattgcaaggatgaaat 9292256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 493
Target Start/End: Complemental strand, 10770602 - 10770509
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||| |||||||||||||||||   || ||||| ||| |||| ||||||| | | || || ||| |||||||||| ||| ||||||||||||||    
T  10770602 ggaccaaattttaaatgattaacaattgcaaggctaaattgccaggattagcaattacagggacgaatttttaaatgacgcctaattgcaagga 10770509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 493
Target Start/End: Complemental strand, 13948892 - 13948799
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||   | ||||||||| |||| | ||||| ||| || |  ||| |||||||||| ||  ||||||||||||||    
T  13948892 ggacgaaattttaaatgattaaacaatgcaagggtaaattgccaagattagcgattacatggactaatttttaaatgatgcctaattgcaagga 13948799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 429
Target Start/End: Original strand, 32717089 - 32717122
Alignment:
Q  396 agagggacgaaattttaaatgattaaattttaca 429  Q
    |||||||||||||||||||||||||| |||||||    
T  32717089 agagggacgaaattttaaatgattaatttttaca 32717122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 493
Target Start/End: Complemental strand, 36314410 - 36314317
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||| |||||||||||||||||   || ||||| ||| |||| ||||||| | | || || ||| |||||||||| ||| ||||||||||||||    
T  36314410 ggaccaaattttaaatgattaacaattgcaaggctaaattgccaggattagcaattacagggacgaatttttaaatgacgcctaattgcaagga 36314317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 499
Target Start/End: Complemental strand, 40033593 - 40033532
Alignment:
Q  438 ttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||| |||||| |  || |||||||||||||| || ||||||||||||| ||||    
T  40033593 ttgcaaggattagcgaatacatggatcaatttttaaacgatccttaattgcaaggatgaaat 40033532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 493
Target Start/End: Complemental strand, 47551601 - 47551512
Alignment:
Q  404 gaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||   | ||||||||| |||| || |||| ||| || || ||| |||||||||| |||  |||||||||||||    
T  47551601 gaaattttaaatgattaaacaatgcaagggtaaattgccagtattagcgattacagggactaatttttaaatgacatctaattgcaagga 47551512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 493
Target Start/End: Original strand, 52032457 - 52032546
Alignment:
Q  404 gaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||   | ||||||||  |||| ||||||| ||| || || ||| |||||||||| |||  |||||||||||||    
T  52032457 gaaattttaaatgattaaacaatgcaagggtatattgccaggattagcgattacagggactaatttttaaatgacgtctaattgcaagga 52032546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 401 - 493
Target Start/End: Complemental strand, 40788531 - 40788439
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||  | ||| ||||| |||  || |||| ||| ||||| ||| ||||||||||  || | ||||||||||||    
T  40788531 gacgaaattttaaatgattaaataatgcaaaggtaaattgtcagaattagcgattagagggactaatttttaaataacgcttaattgcaagga 40788439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 437 - 489
Target Start/End: Complemental strand, 43607855 - 43607803
Alignment:
Q  437 tttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgca 489  Q
    ||||||||||||||||| || || |||||||||||||| ||| | ||||||||    
T  43607855 tttgcaaggattaacgattacagggaccaatttttaaatgacgcttaattgca 43607803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 3e-31; HSPs: 78)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 398 - 499
Target Start/End: Original strand, 25231162 - 25231263
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaa 497  Q
    ||||||||||||||||||||||||| ||| |||||||||||||| ||||||| |||||| |  ||||||||||||||||||||||||||||| |||||||    
T  25231162 agggacgaaattttaaatgattaaagtttgcaagggtaatttgctaggattagcgaatacatggaccaatttttaaacgacccctaattgcagggattaa 25231261  T
Q  498 at 499  Q
    ||    
T  25231262 at 25231263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 371 - 499
Target Start/End: Complemental strand, 15848229 - 15848101
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||||||||| |||||||| || ||||||||||||||||||||||||||||   | ||||||||| || | ||||||| ||| || || ||||||||||    
T  15848229 gtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattaccaggattagcgattacagggaccaatttt 15848130  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||||||| ||||    
T  15848129 taaacgacccctaattgcaaggatgaaat 15848101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 400 - 499
Target Start/End: Complemental strand, 3555362 - 3555263
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||||||   | ||||| ||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  3555362 ggacgaaattttaaatgattaaagaatgcaaggctaatttgtaaggaataacgaatacagagaccaatttttaaacgacccctaattgcaaggatgaaat 3555263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 371 - 499
Target Start/End: Complemental strand, 36382302 - 36382174
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||||||||| |||||||| || |||||||| |||||||||||||||||||   | ||||||||| |||  ||||||| ||| || || ||||||||||    
T  36382302 gtgacgtggcagtgattaagtggggagagggatgaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattatagggaccaatttt 36382203  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    ||||||| |||||||||||||||| ||||    
T  36382202 taaacgaaccctaattgcaaggatgaaat 36382174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 371 - 499
Target Start/End: Complemental strand, 39423656 - 39423528
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||| ||||| |||||||| || ||||||||||||||||||||||||||||   ||||||| ||| |||| || |||| ||| || |||||||||||||    
T  39423656 gtgacatggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatacaaggataaattgccagaattagcgattacagagaccaatttt 39423557  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    |||||||||| ||||| ||||||| ||||    
T  39423556 taaacgacccgtaattacaaggatgaaat 39423528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 375 - 499
Target Start/End: Complemental strand, 39498447 - 39498323
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || ||||||||||||||||||||||||||||   |  | |||||| |||| ||||||||||| || || ||||||||||||||    
T  39498447 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgtaggggtaaattgccaggattaacgattacagggaccaatttttaaa 39498348  T
Q  475 cgacccctaattgcaaggattaaat 499  Q
    |||||||||||| ||||||| ||||    
T  39498347 cgacccctaattacaaggatcaaat 39498323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 13692536 - 13692635
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||| || ||||||||||||| |||||| || |||||||||||||||||||||||||||||||||| ||||    
T  13692536 ggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattgcaaggatgaaat 13692635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 371 - 494
Target Start/End: Original strand, 44714048 - 44714171
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||| ||||| |||||||| || ||||||||||||||||||||||||||||   | ||||||||| |||| ||||||| | | || || ||| ||||||    
T  44714048 gtgacatggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcaattacagggactaatttt 44714147  T
Q  471 taaacgacccctaattgcaaggat 494  Q
    ||||||||||||||||||||||||    
T  44714148 taaacgacccctaattgcaaggat 44714171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 377 - 499
Target Start/End: Original strand, 11163316 - 11163438
Alignment:
Q  377 tggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacg 476  Q
    ||||| |||||||| || ||||||||||||||||||||||||||||   | ||  ||||| |||| ||||||| ||| || || ||||||||||||||||    
T  11163316 tggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcagaggtaaattgccaggattagcgattacagggaccaatttttaaacg 11163415  T
Q  477 acccctaattgcaaggattaaat 499  Q
    |||||||||||||||||| ||||    
T  11163416 acccctaattgcaaggatcaaat 11163438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 398 - 499
Target Start/End: Complemental strand, 25230216 - 25230115
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaa 497  Q
    |||||||||||||||||||||||    || ||||| || ||||||||||||| |||||| || ||||||||||||||||||||||||||||| |||||||    
T  25230216 agggacgaaattttaaatgattagtaattgcaaggctagtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattgcagggattaa 25230117  T
Q  498 at 499  Q
    ||    
T  25230116 at 25230115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 371 - 499
Target Start/End: Complemental strand, 10712864 - 10712736
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||||||| | |||||||| || |||||||| |||||||||||||||||||   | ||||||||| |||| |||||||| || || |  ||||||||||    
T  10712864 gtgacgtggtagtgattaagtggggagagggatgaaattttaaatgattaaacaatgcaagggtaaattgccaggattaatgattataaggaccaatttt 10712765  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    ||||||| |||||||||||||||| ||||    
T  10712764 taaacgaaccctaattgcaaggatgaaat 10712736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 404 - 499
Target Start/End: Original strand, 3556329 - 3556424
Alignment:
Q  404 gaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||   | ||||| || ||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||| ||||    
T  3556329 gaaattttaaatgattaaagaatgcaaggctagtttgcaaggattaacgattacagagaccaatttttaaacgacccataattgcaaggatgaaat 3556424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 400 - 499
Target Start/End: Complemental strand, 6588795 - 6588696
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||||||   | ||||| || ||||||||||||| |||||| |  |||||||||||||||||||||||||||||||||| ||||    
T  6588795 ggacgaaattttaaatgattaaagaatgcaaggctagtttgcaaggattagcgaatacatggaccaatttttaaacgacccctaattgcaaggatgaaat 6588696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 10713039 - 10713138
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||| |||||||||||||||   || ||||| |||||||||||||||| |||||| ||| ||||||||||||||||||| ||||||||||||| ||||    
T  10713039 ggacgacattttaaatgattaacgattgcaaggctaatttgcaaggattagcgaatacagaaaccaatttttaaacgacccttaattgcaaggatgaaat 10713138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 34448111 - 34448210
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||  || |||||||||||||||||||| || ||||||||||||||| |||||||||||||||||| ||||    
T  34448111 ggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattaacgaatatagggaccaatttttaaacaacccctaattgcaaggatgaaat 34448210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 36755404 - 36755503
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||| || ||||||||||||| ||| || || |||||||||||||||||||||||||||||||||| ||||    
T  36755404 ggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgattatagggaccaatttttaaacgacccctaattgcaaggatgaaat 36755503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 372 - 499
Target Start/End: Original strand, 44045290 - 44045417
Alignment:
Q  372 tgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaattttt 471  Q
    |||||||||| |||||||  ||   ||||||| |||||||||||||||||   || ||||| || ||||||||||||| |||||| || |||||||||||    
T  44045290 tgacgtggcagtgattaactgggatgagggacaaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagggaccaattttt 44045389  T
Q  472 aaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||| |||| ||||    
T  44045390 aaacgacccctaattgcagggatcaaat 44045417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 401 - 491
Target Start/End: Original strand, 9076384 - 9076474
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaag 491  Q
    |||||||||||||||||||||   || ||||  || ||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  9076384 gacgaaattttaaatgattaatgattgcaagactagtttgcaaggattaacgaatacggagaccaatttttaaacgacccctaattgcaag 9076474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 371 - 499
Target Start/End: Complemental strand, 2318299 - 2318172
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||||||||| | |||||| || ||||||||||||||||||||||||||||   | ||||||||| |||| || |||| ||| || | |||||||||||    
T  2318299 gtgacgtggcattaattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccagaattagcgattacatagaccaatttt 2318200  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    ||||| | |||||||||||||||| ||||    
T  2318199 taaacta-ccctaattgcaaggatgaaat 2318172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 375 - 499
Target Start/End: Complemental strand, 6658015 - 6657891
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || ||||||||||||||||||||||||||||   | || |||||| |||| | |||||  || || || ||||||||||||||    
T  6658015 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaggggtaaattgccatgattagtgattacagggaccaatttttaaa 6657916  T
Q  475 cgacccctaattgcaaggattaaat 499  Q
    ||||||| |||||||||||| ||||    
T  6657915 cgaccccaaattgcaaggatcaaat 6657891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 375 - 491
Target Start/End: Complemental strand, 16099192 - 16099076
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || ||||||||||||||||||||||||||||   | || |||||| |||| |||||||  || || || ||||||||||||||    
T  16099192 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaggggtaaattgccaggattagtgattacagggaccaatttttaaa 16099093  T
Q  475 cgacccctaattgcaag 491  Q
     ||||||||||||||||    
T  16099092 tgacccctaattgcaag 16099076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 371 - 499
Target Start/End: Original strand, 37895634 - 37895762
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||||||||| |||||||| || ||||||||||||||||||||||||||||   | |||| |||| |||| ||||||| ||| ||  |  |||| ||||    
T  37895634 gtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagtgtaaattgccaggattagcgattacgggaaccattttt 37895733  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    |||||||||| ||||||||||||| ||||    
T  37895734 taaacgacccataattgcaaggatgaaat 37895762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 375 - 493
Target Start/End: Original strand, 14900743 - 14900859
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || |||||||||||||||||||||||||||    ||||||| ||| |||| ||||||| | | || || ||| ||||||||||    
T  14900743 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa--catacaaggctaaattgccaggattagcaattacagggacaaatttttaaa 14900840  T
Q  475 cgacccctaattgcaagga 493  Q
    |||||||||||||||||||    
T  14900841 cgacccctaattgcaagga 14900859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 15848404 - 15848503
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||| || || |||||||||| |||||| | | ||||||||||||||||||||||||||||||||| ||||    
T  15848404 ggacgaaattttaaatgattaatgattgcaaggttagttcgcaaggattagcgaatacataaaccaatttttaaacgacccctaattgcaaggatgaaat 15848503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 16099340 - 16099439
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||| |||||||||||||||||   || ||||| || |||||||||||||  ||||| || |||||||||||||||||||||||||||||||||| ||||    
T  16099340 ggactaaattttaaatgattaatgattgcaaggctagtttgcaaggattagtgaatacagggaccaatttttaaacgacccctaattgcaaggatcaaat 16099439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 400 - 499
Target Start/End: Complemental strand, 30729733 - 30729634
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||| |||||||   | |||||| ||||||||||||||| |||||| || ||||||||||||||||||  |||||||||||||| ||||    
T  30729733 ggacgaaattttaaacgattaaagaatgcaagggcaatttgcaaggattagcgaatatagggaccaatttttaaacgacgtctaattgcaaggatgaaat 30729634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 36480034 - 36480133
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||| |||||   || ||||| || ||||||||||||| |||||| || |||||||||||||||||||| ||||||||||||| ||||    
T  36480034 ggacgaaattttaaattattaatgattgcaaggctagtttgcaaggattagcgaatatagggaccaatttttaaacgacccttaattgcaaggatgaaat 36480133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 404 - 499
Target Start/End: Complemental strand, 37895455 - 37895360
Alignment:
Q  404 gaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||   || ||||| || ||||||||||||| |||||| || |||||||||||||||||||| ||||||||||||| ||||    
T  37895455 gaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagggaccaatttttaaacgacccttaattgcaaggatgaaat 37895360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 398 - 499
Target Start/End: Complemental strand, 44044228 - 44044127
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaa 497  Q
    ||||||||||||||||||||||||   |||||||| || ||| |||||||||  ||||| || ||||||||||||||| ||||||||||||| |||| ||    
T  44044228 agggacgaaattttaaatgattaatgattacaaggttagttttcaaggattagtgaatacagggaccaatttttaaaccacccctaattgcagggatcaa 44044129  T
Q  498 at 499  Q
    ||    
T  44044128 at 44044127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 402 - 486
Target Start/End: Original strand, 28230057 - 28230141
Alignment:
Q  402 acgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaatt 486  Q
    ||||||||||||||||||||| |||  ||||||||||||| ||||||||||| || || |||||||||||||| ||||| |||||    
T  28230057 acgaaattttaaatgattaaactttgaaagggtaatttgctaggattaacgattacagggaccaatttttaaatgacccataatt 28230141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 6658163 - 6658262
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||| |||||||||||||||||   ||  |||| || ||||||||||||| |||||| || ||||||||||||||||||| |||||||||||||| ||||    
T  6658163 ggactaaattttaaatgattaatgattgtaaggctagtttgcaaggattagcgaatacagggaccaatttttaaacgacctctaattgcaaggatcaaat 6658262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 36382443 - 36382542
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||  || |||||| |||||| |||||| || |||||||||||||||||||| ||||||||||||| ||||    
T  36382443 ggacgaaattttaaatgattaacgattgcaagactagtttgcatggattagcgaatacagggaccaatttttaaacgacccttaattgcaaggatgaaat 36382542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 371 - 490
Target Start/End: Complemental strand, 36479859 - 36479740
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||| ||||| |||||||| || |||| |||||||||||||||||||||||   | |||||||||  ||| | ||||| ||| || |  ||||||||||    
T  36479859 gtgacatggcagtgattaagtggggagatggacgaaattttaaatgattaaacaatgcaagggtaaaatgctaagattagcgattacatggaccaatttt 36479760  T
Q  471 taaacgacccctaattgcaa 490  Q
    ||||||||||||||||||||    
T  36479759 taaacgacccctaattgcaa 36479740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 39423831 - 39423930
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||| |||||||||||||||||   || ||||  || ||||||||||||| |||||| || || ||||||||||||||||||||||||||||||| ||||    
T  39423831 ggacaaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgaatatagggatcaatttttaaacgacccctaattgcaaggatgaaat 39423930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 400 - 499
Target Start/End: Complemental strand, 44713907 - 44713808
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||| || ||||||||||||| |||||| |  |||||||||||||||||||| ||||| ||||||| ||||    
T  44713907 ggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacattgaccaatttttaaacgacccttaattacaaggatgaaat 44713808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 396 - 486
Target Start/End: Original strand, 3653392 - 3653481
Alignment:
Q  396 agagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaatt 486  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||| | ||||||||| || |  |||||||||||||| ||||| |||||    
T  3653392 agagggacgaaattttaaatgattaaactttgcaagggtaatttgcca-gattaacgattacatggaccaatttttaaatgacccataatt 3653481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 405 - 499
Target Start/End: Original strand, 39498600 - 39498694
Alignment:
Q  405 aaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||   || ||||| || ||||||||||||| |||||| |  ||||||||||||||||| |||||||||||||||| ||||    
T  39498600 aaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacatggaccaatttttaaacgatccctaattgcaaggatcaaat 39498694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 377 - 499
Target Start/End: Complemental strand, 45556247 - 45556125
Alignment:
Q  377 tggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacg 476  Q
    ||||| ||||||||  | ||||||||| ||||||||||||||||||   | || || ||| |||| ||||||| ||| || || ||||||||||||||||    
T  45556247 tggcagtgattaagtagggagagggacaaaattttaaatgattaaacaatgcagggataaattgccaggattagcgattacagggaccaatttttaaacg 45556148  T
Q  477 acccctaattgcaaggattaaat 499  Q
    | |||||||||||||||| ||||    
T  45556147 atccctaattgcaaggatcaaat 45556125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 405 - 499
Target Start/End: Original strand, 45556368 - 45556462
Alignment:
Q  405 aaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||   || ||||| || ||||||| ||||| |||||| || |||||||||||||||||||||||||| ||||||| ||||    
T  45556368 aaattttaaatgattaatgattgcaaggctagtttgcaaagattagcgaatacagcgaccaatttttaaacgacccctaattacaaggatcaaat 45556462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 404 - 489
Target Start/End: Original strand, 6589679 - 6589764
Alignment:
Q  404 gaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgca 489  Q
    ||||||||||||||||||| ||| |||||||||||||| || |||||||| || |  |||||||||||||| ||||| ||||||||    
T  6589679 gaaattttaaatgattaaactttgcaagggtaatttgccagaattaacgattacatggaccaatttttaaatgacccttaattgca 6589764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 400 - 489
Target Start/End: Original strand, 39936563 - 39936651
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgca 489  Q
    ||||||||||||||||||||||| ||| |||||||||||||| ||||||||||| || |  |||||| |||||||| || ||||||||||    
T  39936563 ggacgaaattttaaatgattaaactttgcaagggtaatttgccaggattaacgattacaaggaccaa-ttttaaaccacgcctaattgca 39936651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 398 - 486
Target Start/End: Original strand, 202670 - 202758
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaatt 486  Q
    ||||||||||||||||||||||||| | | ||||| |||||||| ||||||||||| || |  ||| |||||||||| |||||||||||    
T  202670 agggacgaaattttaaatgattaaactctgcaaggctaatttgccaggattaacgattacatggacgaatttttaaatgacccctaatt 202758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 491
Target Start/End: Original strand, 22051304 - 22051400
Alignment:
Q  395 gagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaag 491  Q
    ||||| ||||||||||||||||||||||   | ||||||||| |||| ||||||| ||| || |||||| ||||||||||| ||| |||||||||||    
T  22051304 gagagagacgaaattttaaatgattaaacaatgcaagggtaaattgctaggattagcgattacagagactaatttttaaacaacctctaattgcaag 22051400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 404 - 491
Target Start/End: Original strand, 6307038 - 6307125
Alignment:
Q  404 gaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaag 491  Q
    ||||||||||||||||||||  | || |  ||||||| |||||||||||| || || ||||||||||||||||||| |||||||||||    
T  6307038 gaaattttaaatgattaaataatgcaggactaatttgtaaggattaacgattatagggaccaatttttaaacgaccactaattgcaag 6307125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 400 - 493
Target Start/End: Complemental strand, 15604451 - 15604358
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||   | ||||||||| |||| ||||||| ||| || || ||| |||||||||| ||| ||||||||||||||    
T  15604451 ggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagggactaatttttaaatgacacctaattgcaagga 15604358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 374 - 498
Target Start/End: Complemental strand, 6846922 - 6846798
Alignment:
Q  374 acgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaa 473  Q
    |||||||| | |||||| ||  |||||||||||||||||||||||| |||||| || ||  ||  |||  ||||||||||||  |  |||||||||||||    
T  6846922 acgtggcagtaattaagtgggaagagggacgaaattttaaatgattcaattttgcagggacaaaatgcccggattaacgaattcaaggaccaatttttaa 6846823  T
Q  474 acgacccctaattgcaaggattaaa 498  Q
    | |||||||| ||||| ||||||||    
T  6846822 atgacccctatttgcagggattaaa 6846798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 405 - 489
Target Start/End: Complemental strand, 28228777 - 28228693
Alignment:
Q  405 aaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgca 489  Q
    |||||| ||||||||||| |||  ||| ||||||||| | ||||||||| || || |||||||||||||| ||||||||||||||    
T  28228777 aaatttcaaatgattaaactttgaaagagtaatttgccacgattaacgattacagggaccaatttttaaatgacccctaattgca 28228693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 400 - 499
Target Start/End: Complemental strand, 11163166 - 11163067
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||| |||||||||||||||||   || ||||  || ||||||||||||| |||||| || |||||||||||||||||||  ||||||||| ||| ||||    
T  11163166 ggactaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgaatacagggaccaatttttaaacgacctttaattgcaaagatcaaat 11163067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 371 - 498
Target Start/End: Complemental strand, 11689682 - 11689555
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||||||||| |||||||| || |||| |||||||||||||| ||||||||||||   |||  ||  |||  ||||||| ||||| || || |||||||    
T  11689682 gtgacgtggcagtgattaagtggggagatggacgaaattttaagtgattaaattttggcaggacaaaatgccgggattaaagaatacagggatcaatttt 11689583  T
Q  471 taaacgacccctaattgcaaggattaaa 498  Q
    |||| |||||||| || |||||| ||||    
T  11689582 taaatgacccctatttccaaggactaaa 11689555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 402 - 493
Target Start/End: Original strand, 28226060 - 28226151
Alignment:
Q  402 acgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||   | ||||||||| |||| ||||||| ||| || || ||| |||||||||| ||| ||||||||||||||    
T  28226060 acgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagggactaatttttaaatgacgcctaattgcaagga 28226151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 400 - 493
Target Start/End: Original strand, 15604653 - 15604746
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||   | ||||||||| |||| ||||||| ||| || || ||| | |||||||| ||| ||||||||||||||    
T  15604653 ggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagggactagtttttaaatgacacctaattgcaagga 15604746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 398 - 499
Target Start/End: Original strand, 21370516 - 21370617
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaa 497  Q
    |||||||||||||||||| |||||   || ||| | || |||||||||||||||||||| |  || ||||||||||||||||  ||||| ||||||| ||    
T  21370516 agggacgaaattttaaattattaatgattgcaatgctagtttgcaaggattaacgaatacatggatcaatttttaaacgacctataattacaaggatgaa 21370615  T
Q  498 at 499  Q
    ||    
T  21370616 at 21370617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 404 - 489
Target Start/End: Complemental strand, 39935563 - 39935478
Alignment:
Q  404 gaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgca 489  Q
    ||||||||||||||||||| ||| ||||| |||||||  ||||||||||| || |   |||||||||||||| || ||||||||||    
T  39935563 gaaattttaaatgattaaactttgcaaggataatttgtcaggattaacgattataagaaccaatttttaaaccacacctaattgca 39935478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 404 - 493
Target Start/End: Complemental strand, 41587342 - 41587254
Alignment:
Q  404 gaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||   | |||||||||||| | ||||||||||| || || |||||||||||||| ||| | ||||||||||||    
T  41587342 gaaattttaaatgattaaacaatgcaagggtaattttccaggattaacgattacag-gaccaatttttaaatgactcttaattgcaagga 41587254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 371 - 483
Target Start/End: Original strand, 11721377 - 11721489
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    |||||||| || |||||||| || ||||| ||||||||||||| ||||||||||||   ||| |||  ||  |||||||| ||||| || || |||||||    
T  11721377 gtgacgtgacagtgattaagtggggagagagacgaaattttaagtgattaaattttggcaggataaaatgtcaggattaaagaatacagggatcaatttt 11721476  T
Q  471 taaacgaccccta 483  Q
    |||| ||||||||    
T  11721477 taaatgaccccta 11721489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 383 - 483
Target Start/End: Complemental strand, 17266527 - 17266427
Alignment:
Q  383 tgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccct 482  Q
    |||||||| || ||||||||| ||||||||||||||||||||||  ||||| || |||  ||||| |||||||| |  ||||| |||||||| || ||||    
T  17266527 tgattaagtggggagagggaccaaattttaaatgattaaattttggaagggaaaattgtcaggataaacgaatacattgaccattttttaaatgatccct 17266428  T
Q  483 a 483  Q
    |    
T  17266427 a 17266427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 371 - 499
Target Start/End: Complemental strand, 34447953 - 34447826
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    |||| |||||| |||||||| || ||||| |||||||||| |||| ||||||   | ||||||||| |||  ||||||  ||| || || ||||||||||    
T  34447953 gtgatgtggcagtgattaagtggggagagagacgaaattt-aaattattaaacaatgcaagggtaaattgtcaggatttgcgattatagggaccaatttt 34447855  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    |||| ||||||||||| ||||||| ||||    
T  34447854 taaatgacccctaattacaaggatgaaat 34447826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 406 - 489
Target Start/End: Complemental strand, 3652317 - 3652234
Alignment:
Q  406 aattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgca 489  Q
    ||||||||||||||||| ||| |||||||||||||| | ||||||||| || |  ||||||||||| || || |||| ||||||    
T  3652317 aattttaaatgattaaactttgcaagggtaatttgccatgattaacgattatattgaccaatttttgaatgatccctgattgca 3652234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 380 - 471
Target Start/End: Original strand, 17266626 - 17266717
Alignment:
Q  380 caatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaattttt 471  Q
    ||||||||||| || ||||  ||||||||||||||||||||||||||   |||| || |||  | |||||||||||| |||||||| |||||    
T  17266626 caatgattaagtggggagaatgacgaaattttaaatgattaaattttgggagggcaaattgtcaagattaacgaatacagagaccatttttt 17266717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 375 - 421
Target Start/End: Complemental strand, 33739840 - 33739794
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaa 421  Q
    ||||||| |||||||| || |||||||||||||||||||||||||||    
T  33739840 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 33739794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 400 - 493
Target Start/End: Original strand, 8710782 - 8710875
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||   | ||||||||| |||  ||||||| ||| || |  ||| |||||||||| ||| ||||||||||||||    
T  8710782 ggacgaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacatggactaatttttaaatgacgcctaattgcaagga 8710875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 372 - 429
Target Start/End: Complemental strand, 25623428 - 25623371
Alignment:
Q  372 tgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttaca 429  Q
    |||||||||| |||||||  ||  |||||||||||||||||||||||||| |||||||    
T  25623428 tgacgtggcagtgattaaccgggtagagggacgaaattttaaatgattaatttttaca 25623371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 408 - 489
Target Start/End: Original strand, 43742000 - 43742081
Alignment:
Q  408 ttttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgca 489  Q
    ||||||||||||||| ||| |||||||||||||  |||||||| || || |  |||||||||||||| |||| | |||||||    
T  43742000 ttttaaatgattaaactttgcaagggtaatttgtcaggattaatgattacatggaccaatttttaaatgacctccaattgca 43742081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 10840617 - 10840562
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaatttt 426  Q
    |||||||| || |||||||| ||  |||||||||||| ||||||||||||||||||    
T  10840617 gtgacgtgacagtgattaagtgggaagagggacgaaagtttaaatgattaaatttt 10840562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 422
Target Start/End: Complemental strand, 36755234 - 36755183
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaa 422  Q
    |||||||| || |||||||| || ||||| ||||||||||||||||||||||    
T  36755234 gtgacgtgacagtgattaagtggggagagagacgaaattttaaatgattaaa 36755183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 375 - 498
Target Start/End: Original strand, 41248819 - 41248942
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || |||||||||||||||||||| ||||||   || || || |||  ||| ||||||| | | || || ||| ||||||||||    
T  41248819 cgtggcagtgattaagtggggagagggacgaaattttaaacgattaacaattgcagggttaaaatgccaggattagcaattacagggacgaatttttaaa 41248918  T
Q  475 cgacccctaattgcaaggattaaa 498  Q
     | | ||||||||||||| |||||    
T  41248919 tgccgcctaattgcaagggttaaa 41248942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 397 - 427
Target Start/End: Original strand, 11349518 - 11349548
Alignment:
Q  397 gagggacgaaattttaaatgattaaatttta 427  Q
    |||||||||||||||||||||||||||||||    
T  11349518 gagggacgaaattttaaatgattaaatttta 11349548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 375 - 421
Target Start/End: Original strand, 13995933 - 13995979
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaa 421  Q
    ||||||| |||||||| || |||||||||||||||||||| ||||||    
T  13995933 cgtggcagtgattaagtggggagagggacgaaattttaaacgattaa 13995979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 375 - 421
Target Start/End: Original strand, 33062310 - 33062356
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaa 421  Q
    ||||||| |||||||| || ||||||||||||||| |||||||||||    
T  33062310 cgtggcagtgattaagtggggagagggacgaaattataaatgattaa 33062356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 499
Target Start/End: Original strand, 2318888 - 2318925
Alignment:
Q  462 accaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  2318888 accaatttttaaacgacccctaattggaaggatgaaat 2318925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 493
Target Start/End: Complemental strand, 8342299 - 8342206
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||   | ||||| ||| |||| ||||||| | | || | |||| |||||||||| ||| | ||||||||||||    
T  8342299 ggacgaaattttaaatgattaaacaatgcaaggataaattgccaggattaccaattacatagactaatttttaaatgacgcttaattgcaagga 8342206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 493
Target Start/End: Original strand, 8342493 - 8342586
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||| ||||||   | ||||||||| |||  |||||||  || || |||||| |||||||||| ||| |||||||| |||||    
T  8342493 ggacgaaattttaaataattaaacaatgcaagggtaaattgtcaggattattgattacagagactaatttttaaatgacgcctaattgtaagga 8342586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 426
Target Start/End: Complemental strand, 11347562 - 11347509
Alignment:
Q  373 gacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaatttt 426  Q
    ||||||||| |||||||   | ||||| ||||||||||||||||||||||||||    
T  11347562 gacgtggcactgattaattagggagagagacgaaattttaaatgattaaatttt 11347509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 429
Target Start/End: Original strand, 25624417 - 25624450
Alignment:
Q  396 agagggacgaaattttaaatgattaaattttaca 429  Q
    |||||||||||||||||||||||||| |||||||    
T  25624417 agagggacgaaattttaaatgattaatttttaca 25624450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 474
Target Start/End: Complemental strand, 25892521 - 25892432
Alignment:
Q  385 attaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    |||||| || |||||||||||| |||||||||||||||   |  ||||||||||||| ||||||| ||| || |  ||| ||||||||||    
T  25892521 attaagtggggagagggacgaatttttaaatgattaaacaatggaagggtaatttgccaggattagcgattacatggacaaatttttaaa 25892432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 374 - 422
Target Start/End: Complemental strand, 6573184 - 6573136
Alignment:
Q  374 acgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaa 422  Q
    ||||| || |||||||| || |||||||||||| |||||||||||||||    
T  6573184 acgtgacagtgattaaggggggagagggacgaatttttaaatgattaaa 6573136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 401 - 493
Target Start/End: Complemental strand, 11830475 - 11830383
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    ||||||||||||||||||||||   | ||||||||| |||  ||||||| | | || || ||| |||||||||| |||  |||||||||||||    
T  11830475 gacgaaattttaaatgattaaacaatgcaagggtaaattgttaggattagcaattacagggactaatttttaaatgacgtctaattgcaagga 11830383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 329 - 420
Target Start/End: Complemental strand, 29958001 - 29957909
Alignment:
Q  329 ttaggggtatttttgtcagttcacatcatcttttgctaatcgg-tgacgtggcaatgattaagaggtgagagggacgaaattttaaatgatta 420  Q
    |||||||||||||||||| ||| |||    ||||||||||  | ||||||||||||||||||  ||  ||||||||||| ||| |||||||||    
T  29958001 ttaggggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcaatgattaaccgggaagagggacgaactttcaaatgatta 29957909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 69; Significance: 1e-30; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 371 - 499
Target Start/End: Original strand, 37850 - 37978
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||||||||| |||||||| || ||||||||||||||||||||||||||||   ||||||||||| |||  ||||||| ||| || | |||||||||||    
T  37850 gtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatacaagggtaaattgtcaggattagcgattacaaagaccaatttt 37949  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    |||||||| ||||||||||||||| ||||    
T  37950 taaacgactcctaattgcaaggatgaaat 37978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 400 - 499
Target Start/End: Complemental strand, 37676 - 37577
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||  || ||||| || |||| |||||| |  ||||||||||||||||| | |||||||||||||| ||||    
T  37676 ggacgaaattttaaatgattaatgattgcaagaatagtttgctagaattagcgaatacaaggaccaatttttaaacgatctctaattgcaaggatgaaat 37577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 1e-30; HSPs: 100)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 383 - 499
Target Start/End: Complemental strand, 39453429 - 39453313
Alignment:
Q  383 tgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccct 482  Q
    |||||||| || ||||||||||||||||||||||||||||   | ||||||||| |||| ||||||| ||| || |||||||||||||||||||||||||    
T  39453429 tgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagagaccaatttttaaacgacccct 39453330  T
Q  483 aattgcaaggattaaat 499  Q
    |||||||||||| ||||    
T  39453329 aattgcaaggatgaaat 39453313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 375 - 499
Target Start/End: Original strand, 3529133 - 3529257
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || ||||||||||||||||||||||||||||   |  | |||||| |||| ||||||||||| || || ||||||||||||||    
T  3529133 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgtaggggtaaattgccaggattaacgattacagggaccaatttttaaa 3529232  T
Q  475 cgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||| ||||    
T  3529233 cgacccctaattgcaaggatcaaat 3529257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 371 - 499
Target Start/End: Complemental strand, 5994030 - 5993902
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||| ||||| |||||||| || ||||||||||||||||||||||||||||   | ||||||||| |||| || |||| ||| || || ||||||||||    
T  5994030 gtgacatggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccagaattagcgattacagggaccaatttt 5993931  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||||||| ||||    
T  5993930 taaacgacccctaattgcaaggatgaaat 5993902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 375 - 499
Target Start/End: Complemental strand, 11761886 - 11761762
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    |||||||||||||||| || |||| |||||||||||||||||||||||   | || |||||| |||| ||||||| ||| || || ||||||||||||||    
T  11761886 cgtggcaatgattaagtggggagatggacgaaattttaaatgattaaacaatgcaggggtaaattgccaggattagcgattacagggaccaatttttaaa 11761787  T
Q  475 cgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||| ||||    
T  11761786 cgacccctaattgcaaggatcaaat 11761762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 371 - 499
Target Start/End: Original strand, 19892595 - 19892723
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||||||||| |||||||| || ||||  ||||||||||||||||||||||   | ||||||||| |||  ||||||||||| || |||||||||||||    
T  19892595 gtgacgtggcagtgattaagtggggagaatgacgaaattttaaatgattaaacaatgcaagggtaaattgttaggattaacgattacagagaccaatttt 19892694  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    ||||||||| |||||||||||||| ||||    
T  19892695 taaacgacctctaattgcaaggatgaaat 19892723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 371 - 499
Target Start/End: Complemental strand, 20840674 - 20840546
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||||||||| |||||||| || ||||||||| ||||||||||| ||||||   | ||||||||| |||| ||||||||||| || ||  |||||||||    
T  20840674 gtgacgtggcagtgattaagtggggagagggacaaaattttaaatcattaaacaatgcaagggtaaattgctaggattaacgattacaggtaccaatttt 20840575  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||||||| ||||    
T  20840574 taaacgacccctaattgcaaggatgaaat 20840546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 371 - 499
Target Start/End: Original strand, 24547412 - 24547540
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||||||||| || ||||| || ||||||||||||||||||||||||||||   | ||||||||| |||| ||||||| ||| || |  ||||||||||    
T  24547412 gtgacgtggcagtggttaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattataaggaccaatttt 24547511  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||||||| ||||    
T  24547512 taaacgacccctaattgcaaggatcaaat 24547540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 371 - 499
Target Start/End: Complemental strand, 35512289 - 35512161
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    |||| |||||| |||||||| || ||||||||||||||||||||||||||||   | ||||||||| |||| ||||||| ||| || || ||||||||||    
T  35512289 gtgatgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagggaccaatttt 35512190  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    |||||||||| ||||||||||||| ||||    
T  35512189 taaacgacccttaattgcaaggatgaaat 35512161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 400 - 499
Target Start/End: Complemental strand, 19892420 - 19892321
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   |||||||| || |||||||||||||||||||| |  |||||||||||||||||||||||||||||||||| ||||    
T  19892420 ggacgaaattttaaatgattaatgattacaaggctagtttgcaaggattaacgaatacatggaccaatttttaaacgacccctaattgcaaggatgaaat 19892321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 376 - 499
Target Start/End: Original strand, 38475291 - 38475414
Alignment:
Q  376 gtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaac 475  Q
    |||||| |||||||| || ||||||||||||||||||||||||||||   | ||||||||| |||  ||||||||||| || |  |||||||||||||||    
T  38475291 gtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgtcaggattaacgattacatggaccaatttttaaac 38475390  T
Q  476 gacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||| ||||    
T  38475391 gacccctaattgcaaggatgaaat 38475414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 371 - 499
Target Start/End: Original strand, 16157142 - 16157270
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||| |||||  ||||||| || ||||||||| ||||||||||||||||||   | ||||||||| |||  ||||||||||| || || ||||||||||    
T  16157142 gtgacatggcagggattaagtggggagagggacaaaattttaaatgattaaacaatgcaagggtaaattgtcaggattaacgattatagggaccaatttt 16157241  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||||||| ||||    
T  16157242 taaacgacccctaattgcaaggatgaaat 16157270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 375 - 499
Target Start/End: Complemental strand, 27587285 - 27587161
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||  || ||||||||||||||||||||||||||||   | || |||||| |||| ||||||| ||| || || ||||||||||||||    
T  27587285 cgtggcagtgattaaatggggagagggacgaaattttaaatgattaaacgatgcaggggtaaattgccaggattagcgattacagggaccaatttttaaa 27587186  T
Q  475 cgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||| ||||    
T  27587185 cgacccctaattgcaaggatcaaat 27587161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 8322720 - 8322819
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||| || ||||||||||||||||||||  | |||||||||||||||||||||||||||||||||| ||||    
T  8322720 ggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattaacgaatacggggaccaatttttaaacgacccctaattgcaaggatgaaat 8322819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 406 - 499
Target Start/End: Original strand, 5835748 - 5835841
Alignment:
Q  406 aattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||| || ||||| |||||||||||||||| |||||| ||| |||||||||||||| || ||||||||||||||| ||||    
T  5835748 aattttaaatgattaaatgttgcaaggctaatttgcaaggattagcgaatacagaaaccaatttttaaacaactcctaattgcaaggatgaaat 5835841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 371 - 499
Target Start/End: Complemental strand, 13963005 - 13962877
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    |||||||| || |||||||| |  ||||||||||||||||||||||||||||   | ||||||||| || | ||||||| | | || || ||||||||||    
T  13963005 gtgacgtgacagtgattaagtgaggagagggacgaaattttaaatgattaaacaatgcaagggtaaattaccaggattagcaattacagggaccaatttt 13962906  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||||||| ||||    
T  13962905 taaacgacccctaattgcaaggataaaat 13962877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 371 - 499
Target Start/End: Original strand, 20814422 - 20814550
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||| ||||| ||||||||  | ||||||||| ||||||||||||||||||   | |||| |||| |||| ||||||| ||| || || ||||||||||    
T  20814422 gtgacatggcagtgattaagtagggagagggacaaaattttaaatgattaaacaatgcaagtgtaaattgctaggattagcgattacagtgaccaatttt 20814521  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||||||| ||||    
T  20814522 taaacgacccctaattgcaaggatgaaat 20814550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 371 - 499
Target Start/End: Complemental strand, 32242383 - 32242255
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||||||||| |||||||| || ||||||||||||||||||||||||||||   | |||| |||| |||| | ||||| | | || || || |||||||    
T  32242383 gtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagagtaaattgccatgattagctattacagggatcaatttt 32242284  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||||||| ||||    
T  32242283 taaacgacccctaattgcaaggatgaaat 32242255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 11762033 - 11762132
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||| |||||||||||||||||   || ||||| || ||||||||||||| |||||| || |||||||||||||||||||||||||||||||||| ||||    
T  11762033 ggactaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattgcaaggatcaaat 11762132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 400 - 499
Target Start/End: Complemental strand, 14194535 - 14194436
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||  || ||||||||||||| |||||| || |||||||||||||||||||||||||||||||||| ||||    
T  14194535 ggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattgcaaggatgaaat 14194436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 400 - 491
Target Start/End: Complemental strand, 16156967 - 16156876
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaag 491  Q
    ||||||||||||||||||||||   || ||||  || |||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  16156967 ggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattaacgaatacatagaccaatttttaaacgacccctaattgcaag 16156876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 377 - 499
Target Start/End: Original strand, 28771131 - 28771253
Alignment:
Q  377 tggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacg 476  Q
    ||||| |||||||| || ||||||||||||||||||||||||||||   |||| |||||| |||| | ||||| ||| || |  ||||||||||||||||    
T  28771131 tggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatacaggggtaaattgccaagattagcgattacatggaccaatttttaaacg 28771230  T
Q  477 acccctaattgcaaggattaaat 499  Q
    |||||||||| ||||||| ||||    
T  28771231 acccctaattacaaggatcaaat 28771253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 401 - 499
Target Start/End: Original strand, 35512431 - 35512529
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||||   || ||||| || ||||||||||||  |||||| || |||||||||||||||||||||||||||||||||| ||||    
T  35512431 gacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattggcgaatacagggaccaatttttaaacgacccctaattgcaaggatgaaat 35512529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 400 - 494
Target Start/End: Complemental strand, 37991311 - 37991217
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggat 494  Q
    ||||||||||| ||||||||||   || ||||| || |||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||    
T  37991311 ggacgaaatttgaaatgattaatgattgcaaggctagtttgcaaggattaacgaatacagggaccaatttttaaacgacccctaattgcagggat 37991217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 371 - 499
Target Start/End: Original strand, 5024305 - 5024433
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    |||| |||||| |||||||| || |||||| |||||||||||||||||||||   | ||| ||||| |||  ||||||| ||| || |  ||||||||||    
T  5024305 gtgatgtggcagtgattaagtggggagaggaacgaaattttaaatgattaaacaatgcaatggtaaattgtcaggattagcgattacaatgaccaatttt 5024404  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||||||| ||||    
T  5024405 taaacgacccctaattgcaaggatgaaat 5024433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 371 - 499
Target Start/End: Complemental strand, 17202540 - 17202412
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||| ||||| |||||||| || ||| |||||||||||||||||| |||||   | ||||||||| |||  ||||||| ||| || || ||||||||||    
T  17202540 gtgacatggcagtgattaagtggggagggggacgaaattttaaatgcttaaacaatgcaagggtaaattgtcaggattagcgattacagtgaccaatttt 17202441  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||| |||||| ||||    
T  17202440 taaacgacccctaattggaaggatgaaat 17202412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 377 - 499
Target Start/End: Complemental strand, 18670334 - 18670215
Alignment:
Q  377 tggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacg 476  Q
    |||||||||||||| || |||| |||||||||||||||||||||||   | ||||||||| ||||   ||||| ||| || || ||||||||||||||||    
T  18670334 tggcaatgattaagtggggagatggacgaaattttaaatgattaaacaatgcaagggtaaattgc---gattagcgattacagggaccaatttttaaacg 18670238  T
Q  477 acccctaattgcaaggattaaat 499  Q
    ||||||| |||||||||| ||||    
T  18670237 acccctacttgcaaggatgaaat 18670215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 400 - 499
Target Start/End: Complemental strand, 3528985 - 3528886
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||| |||||||||||||||||   || ||||| || ||||||||||||| | |||| || |||||||||||||||||||||||||||||||||| ||||    
T  3528985 ggactaaattttaaatgattaacgattgcaaggctagtttgcaaggattagcaaatacagggaccaatttttaaacgacccctaattgcaaggatcaaat 3528886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 6150736 - 6150835
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||| || ||||||| |||||||||||| |  ||| |||||||||||||||||||||||||||||| ||||    
T  6150736 ggacgaaattttaaatgattaatgattgcaaggctagtttgcaaagattaacgaatacatggactaatttttaaacgacccctaattgcaaggatgaaat 6150835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 27587431 - 27587530
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||| |||||||||||||||||   || ||||| || ||||||||||||| |||||| |  |||||||||||||||||||||||||||||||||| ||||    
T  27587431 ggactaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacaaggaccaatttttaaacgacccctaattgcaaggatcaaat 27587530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 400 - 499
Target Start/End: Complemental strand, 28269534 - 28269435
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||| || ||||||||||||| ||||||  | |||||||||||||||||||||||||||||| ||| ||||    
T  28269534 ggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatactgggaccaatttttaaacgacccctaattgcaatgatgaaat 28269435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 39453615 - 39453714
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||| || ||||||| ||||| |||||| || |||||||||||||| ||||||||||||||||||| ||||    
T  39453615 ggacgaaattttaaatgattaatgattgcaaggctagtttgcaaagattagcgaatacagggaccaatttttaaatgacccctaattgcaaggatgaaat 39453714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 43159130 - 43159229
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||| || |||| |||||||| |||||| |  |||||||||||||||||||||||||||||||||| ||||    
T  43159130 ggacgaaattttaaatgattaatgattgcaaggctagtttgtaaggattagcgaatacaacgaccaatttttaaacgacccctaattgcaaggatgaaat 43159229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 400 - 490
Target Start/End: Original strand, 6301859 - 6301949
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaa 490  Q
    ||||||||||||||||||||||   || ||||  || |||||||||||||||||||| |  ||||||||||||||||||||||||||||||    
T  6301859 ggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattaacgaatacaaggaccaatttttaaacgacccctaattgcaa 6301949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 375 - 493
Target Start/End: Original strand, 6758125 - 6758243
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || |||||||||||||||||||||||||||   || ||||| ||| |||| || |||||| | || || ||| ||||||||||    
T  6758125 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaacaattgcaaggttaaattgccagaattaacaattacagggacgaatttttaaa 6758224  T
Q  475 cgacccctaattgcaagga 493  Q
    |||| ||||||||||||||    
T  6758225 cgacgcctaattgcaagga 6758243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 401 - 499
Target Start/End: Original strand, 17202716 - 17202814
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||||   || ||||  || ||||||||||||| |||||| || |||| ||||||||||||||||||||||||||||| ||||    
T  17202716 gacgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgaatacagggaccgatttttaaacgacccctaattgcaaggatgaaat 17202814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 375 - 493
Target Start/End: Complemental strand, 41930653 - 41930535
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || |||||||||||||||||||||||||||   || ||||| ||| |||| ||||||| | | || || ||| ||||||||||    
T  41930653 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaacaattgcaaggctaaattgccaggattagcaattacagggacaaatttttaaa 41930554  T
Q  475 cgacccctaattgcaagga 493  Q
    ||||| |||||||||||||    
T  41930553 cgacctctaattgcaagga 41930535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 405 - 486
Target Start/End: Complemental strand, 5835730 - 5835649
Alignment:
Q  405 aaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaatt 486  Q
    |||||||||||||||||| ||| |||||||||||||||| |||||||||||| |   |||||||||||||||| ||||||||    
T  5835730 aaattttaaatgattaaactttgcaagggtaatttgcaaagattaacgaatacaagaaccaatttttaaacgatccctaatt 5835649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 402 - 499
Target Start/End: Original strand, 13963147 - 13963244
Alignment:
Q  402 acgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||   || ||||  || |||||||||||||||||||| | ||||||||||||||||||||| ||||| ||||||| ||||    
T  13963147 acgaaattttaaatgattaatgattgcaagactagtttgcaaggattaacgaatacatagaccaatttttaaacgacccataattacaaggatgaaat 13963244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 383 - 499
Target Start/End: Complemental strand, 18247213 - 18247099
Alignment:
Q  383 tgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccct 482  Q
    |||||||| || ||||||||||||||| |||||||||||||  | ||||||||| |||| |  |||| ||| || |  ||||||||||||||||||||||    
T  18247213 tgattaagtggggagagggacgaaattctaaatgattaaataatgcaagggtaaattgcca--attagcgattacatggaccaatttttaaacgacccct 18247116  T
Q  483 aattgcaaggattaaat 499  Q
    |||||||||||| ||||    
T  18247115 aattgcaaggatgaaat 18247099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 186735 - 186834
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||| || ||||||| ||||| | |||| || ||||||||||||||||||| |||||||||||||| ||||    
T  186735 ggacgaaattttaaatgattaatgattgcaaggctagtttgcaaagattagcaaatacagggaccaatttttaaacgacctctaattgcaaggatgaaat 186834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 400 - 499
Target Start/End: Complemental strand, 11740799 - 11740700
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||| ||||||||||||||||||   | ||||| || ||||||||||||| |||||| |  || ||||||||||||||||||||||||||||||| ||||    
T  11740799 ggacaaaattttaaatgattaaagaatgcaaggctagtttgcaaggattagcgaatatatggatcaatttttaaacgacccctaattgcaaggatgaaat 11740700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 11741833 - 11741932
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||||||   | ||||| || ||||||| ||||| |||||| ||||||| ||||||||| ||||||||||| ||||||| ||||    
T  11741833 ggacgaaattttaaatgattaaagaatgcaaggctagtttgcaaagattagcgaatacagagaccgatttttaaatgacccctaattacaaggatgaaat 11741932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 376 - 499
Target Start/End: Complemental strand, 16083113 - 16082990
Alignment:
Q  376 gtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaac 475  Q
    |||||| ||||||||  | |||||| |||||||||||||||||||||   | ||||||||| |||| ||||||| ||| || || ||| |||||||||||    
T  16083113 gtggcagtgattaagttgggagaggtacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattatcgattacagggactaatttttaaac 16083014  T
Q  476 gacccctaattgcaaggattaaat 499  Q
     ||||||||||| |||||| ||||    
T  16083013 aacccctaattggaaggatgaaat 16082990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 398 - 489
Target Start/End: Complemental strand, 24141566 - 24141475
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgca 489  Q
    ||||| ||||||||||||||||||| ||| ||||| |||||||| ||||||||||| || || |||||||||||||| |||  |||||||||    
T  24141566 agggatgaaattttaaatgattaaactttgcaaggctaatttgccaggattaacgattacagggaccaatttttaaatgacgtctaattgca 24141475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 38442383 - 38442482
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||| ||||   || ||||| || |||||||||||||||||||| |   ||| ||||||||||||||||||||||||||||| ||||    
T  38442383 ggacgaaattttaaatggttaatgattgcaaggctagtttgcaaggattaacgaatacaagaacccatttttaaacgacccctaattgcaaggatgaaat 38442482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 377 - 499
Target Start/End: Complemental strand, 6150589 - 6150467
Alignment:
Q  377 tggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacg 476  Q
    |||||||||||||| || ||||||||||||||||||||||||||||   | ||||  ||| |||  |||||||  || || |   |||||||||||||||    
T  6150589 tggcaatgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagactaaattgtcaggattagtgattacatgaaccaatttttaaacg 6150490  T
Q  477 acccctaattgcaaggattaaat 499  Q
    |||||||||||||||||| ||||    
T  6150489 acccctaattgcaaggatgaaat 6150467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 437 - 499
Target Start/End: Original strand, 18247429 - 18247491
Alignment:
Q  437 tttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||| ||||    
T  18247429 tttgcaaggattagcgaatacagagaccaaattttaaacgacccctaattgcaaggatgaaat 18247491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 437 - 499
Target Start/End: Complemental strand, 28770944 - 28770882
Alignment:
Q  437 tttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||| |||||| || |||||||||||||||||||||||||||||||||| ||||    
T  28770944 tttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattgcaaggatcaaat 28770882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 400 - 486
Target Start/End: Complemental strand, 35920340 - 35920254
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaatt 486  Q
    ||||||||||||||||||||||   || ||||| |||||||||||||||| |||||| |  ||||||||||||||||| ||||||||    
T  35920340 ggacgaaattttaaatgattaatgattgcaaggctaatttgcaaggattagcgaatacattgaccaatttttaaacgatccctaatt 35920254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 397 - 499
Target Start/End: Original strand, 37992601 - 37992703
Alignment:
Q  397 gagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggatta 496  Q
    |||||||||||||||||| ||||||   || ||||| || ||||||| ||||| | |||||||||| | |||||||||||||||||||||||| |||| |    
T  37992601 gagggacgaaattttaaacgattaatgattgcaaggctagtttgcaaagattagcaaatagagagatcgatttttaaacgacccctaattgcatggatga 37992700  T
Q  497 aat 499  Q
    |||    
T  37992701 aat 37992703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 383 - 488
Target Start/End: Original strand, 35920483 - 35920588
Alignment:
Q  383 tgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccct 482  Q
    |||||||| || ||||||||||||||||||||||||||||   |  |||| ||| |||  ||||||| ||| || || ||||||||||||||||||||||    
T  35920483 tgattaagtggggagagggacgaaattttaaatgattaaacaatggaaggataaattgtcaggattagcgattacagggaccaatttttaaacgacccct 35920582  T
Q  483 aattgc 488  Q
    ||||||    
T  35920583 aattgc 35920588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 406 - 499
Target Start/End: Complemental strand, 42265841 - 42265748
Alignment:
Q  406 aattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||| ||||||   | ||||| || ||||||||||||| |||||| || ||||||||||||||||||||||||||||| |||| ||||    
T  42265841 aattttaaatcattaaagaatgcaaggctagtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattgcagggatgaaat 42265748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 383 - 499
Target Start/End: Original strand, 13362527 - 13362643
Alignment:
Q  383 tgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccct 482  Q
    |||||||| || ||||| ||| ||||||||||||||||||   | ||||||||| |||| | ||||| ||| || |  ||||||||||||||||||||||    
T  13362527 tgattaagtggggagagagactaaattttaaatgattaaacaatgcaagggtaaattgccatgattagcgattacaaggaccaatttttaaacgacccct 13362626  T
Q  483 aattgcaaggattaaat 499  Q
    |||||||| ||| ||||    
T  13362627 aattgcaatgatgaaat 13362643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 397 - 493
Target Start/End: Original strand, 40150127 - 40150223
Alignment:
Q  397 gagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    ||||||| || | ||||||||||||| |||  ||||||||||| | ||||||||||| || || |||||||||| ||| ||||||||||||||||||    
T  40150127 gagggaccaattcttaaatgattaaactttgaaagggtaattttctaggattaacgattacagggaccaattttaaaatgacccctaattgcaagga 40150223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 5994205 - 5994304
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||  || ||||||||||||| |||||| |   ||||||||||||||||||| ||||||||||||| ||||    
T  5994205 ggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgaatacatgaaccaatttttaaacgacccttaattgcaaggatgaaat 5994304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 11047753 - 11047851
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||| || |||||||||||||  ||||| |  ||||||||||||||||||||||| |||||||||| ||||    
T  11047753 ggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagtgaatacat-gaccaatttttaaacgacccctacttgcaaggatgaaat 11047851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 401 - 499
Target Start/End: Complemental strand, 27937164 - 27937068
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||||   || ||||| || ||||||||||||| |||||| |||||||||  ||||||  |||||||||||||||||| ||||    
T  27937164 gacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatatagagaccaa--tttaaatcacccctaattgcaaggatgaaat 27937068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 32242558 - 32242656
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||| |||||||||||||||||   || ||||| || ||||||||||||| |||||| || ||| ||||||||||| |||||||||||||||||| ||||    
T  32242558 ggacaaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacag-gactaatttttaaacaacccctaattgcaaggatgaaat 32242656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 376 - 499
Target Start/End: Complemental strand, 38442204 - 38442081
Alignment:
Q  376 gtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaac 475  Q
    |||||| |||||||| || ||||||||||||||||||||||||||||   | |||| |||| |||  ||||||| ||| || |  ||||||||||||||     
T  38442204 gtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagagtaaattgtcaggattagcgattacaatgaccaatttttaaat 38442105  T
Q  476 gacccctaattgcaaggattaaat 499  Q
     |||||||||||||| ||| ||||    
T  38442104 aacccctaattgcaacgatgaaat 38442081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 401 - 499
Target Start/End: Original strand, 21257478 - 21257576
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||| ||||||||||||||   |  ||||| || ||||||||||||| |||||| || | ||||||||||||||||||||||||||| |||| ||||    
T  21257478 gacgaatttttaaatgattaatgatcgcaaggctagtttgcaaggattagcgaatacagtgtccaatttttaaacgacccctaattgcagggatgaaat 21257576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 371 - 483
Target Start/End: Complemental strand, 12904895 - 12904783
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    |||||||| || |||||||| || ||||||||||||||||||||| ||||||||||   |||  || |||  |||||||||||||| || ||||| ||||    
T  12904895 gtgacgtgacattgattaagtggggagagggacgaaattttaaattattaaattttgggaggacaaattgtcaggattaacgaatacagggaccattttt 12904796  T
Q  471 taaacgaccccta 483  Q
    |||| || |||||    
T  12904795 taaatgatcccta 12904783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 400 - 499
Target Start/End: Complemental strand, 5024131 - 5024032
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||| ||||||||||||||||    || ||||| || ||||||||||||| |||||| |   | ||||||||||||||||||||||||||||||| ||||    
T  5024131 ggacaaaattttaaatgattagtgattgcaaggctagtttgcaaggattagcgaatacatgtatcaatttttaaacgacccctaattgcaaggatgaaat 5024032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 383 - 494
Target Start/End: Original strand, 14194722 - 14194832
Alignment:
Q  383 tgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccct 482  Q
    |||||||| || ||||||||||||||||||||||||||||   | ||||||||| |||| |||||||   | || |  | ||||||||||||||||||||    
T  14194722 tgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagtaattaca-tggccaatttttaaacgacccct 14194820  T
Q  483 aattgcaaggat 494  Q
    |||| |||||||    
T  14194821 aattacaaggat 14194832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 400 - 499
Target Start/End: Complemental strand, 20814247 - 20814149
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || |||   || ||||||||||||| |||||| | |||||||||||||||||||| ||||||| |||||| ||||    
T  20814247 ggacgaaattttaaatgattaatgattgcaatactagtttgcaaggattagcgaataca-agaccaatttttaaacgacctctaattgtaaggatgaaat 20814149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 405 - 499
Target Start/End: Original strand, 19517928 - 19518022
Alignment:
Q  405 aaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||   || ||||| || ||||||| ||||| |||||| |  ||| ||||||||||| |||||||||||||||||| ||||    
T  19517928 aaattttaaatgattaatgattgcaaggctagtttgcaaagattagcgaatacatggactaatttttaaactacccctaattgcaaggatgaaat 19518022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 428 - 494
Target Start/End: Complemental strand, 24547261 - 24547195
Alignment:
Q  428 caagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggat 494  Q
    ||||| || ||||||||||||| ||| || || ||||||||||| ||||||||||||||||||||||    
T  24547261 caaggctagtttgcaaggattagcgattacagggaccaattttttaacgacccctaattgcaaggat 24547195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 405 - 499
Target Start/End: Complemental strand, 29646469 - 29646375
Alignment:
Q  405 aaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||   ||  |||| || ||||||||||||| |||||| |  |||||||||||||| ||||||||||| ||||||| ||||    
T  29646469 aaattttaaatgattaatgattggaaggctagtttgcaaggattagcgaatacatggaccaatttttaaaagacccctaattacaaggataaaat 29646375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 400 - 494
Target Start/End: Original strand, 42067840 - 42067934
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggat 494  Q
    ||||||||||||||||||||||| ||| || ||| | ||||| ||||||| | | || || |||||| ||||||| |||||||||||||| ||||    
T  42067840 ggacgaaattttaaatgattaaagtttgcaggggcagtttgccaggattatcaattacagggaccaaattttaaatgacccctaattgcagggat 42067934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 402 - 499
Target Start/End: Original strand, 16083261 - 16083358
Alignment:
Q  402 acgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||   || ||||  || ||||||||||||| |||||| |   |||||||||||||||| || ||||||||||||| ||||    
T  16083261 acgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgaatatatgaaccaatttttaaacgatccttaattgcaaggatgaaat 16083358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 400 - 493
Target Start/End: Original strand, 17544362 - 17544455
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||| ||||||||||||||||||   | ||||||||| |||| ||||||||||| || ||  || |||||||||| ||| ||||||||||||||    
T  17544362 ggacaaaattttaaatgattaaacaatgcaagggtaaattgccaggattaacgattacaggaactaatttttaaatgacgcctaattgcaagga 17544455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 397 - 474
Target Start/End: Complemental strand, 42063369 - 42063292
Alignment:
Q  397 gagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||||||||||||  ||| || ||| ||||||| ||||||| ||| || |||||||||||||||||    
T  42063369 gagggacaaaattttaaatgattaacatttgcaggggcaatttgccaggattagcgattacagagaccaatttttaaa 42063292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 383 - 491
Target Start/End: Complemental strand, 186548 - 186440
Alignment:
Q  383 tgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccct 482  Q
    |||||||| || | ||||||||||||||||||||||||||   | ||||| ||| || | || |||||||| || |  ||| ||||||||||||||||||    
T  186548 tgattaagtggggggagggacgaaattttaaatgattaaacaatgcaaggttaaatttccagaattaacgattacaatgactaatttttaaacgacccct 186449  T
Q  483 aattgcaag 491  Q
    |||| ||||    
T  186448 aatttcaag 186440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 488
Target Start/End: Complemental strand, 21265255 - 21265167
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgc 488  Q
    |||||||||||||||| |||||   || ||||| || ||||||||||||| | |||| |  ||||||||||||||||||| ||||||||    
T  21265255 ggacgaaattttaaataattaatgattgcaaggctagtttgcaaggattagcaaatacatggaccaatttttaaacgacctctaattgc 21265167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 383 - 499
Target Start/End: Original strand, 29646661 - 29646776
Alignment:
Q  383 tgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccct 482  Q
    |||||||| || ||||||||||||||||||||||||||||   | ||||||||| |||  ||||||| ||| || |   ||||| ||||||||||| |||    
T  29646661 tgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacatgcaccaa-ttttaaacgactcct 29646759  T
Q  483 aattgcaaggattaaat 499  Q
    |||| ||||||| ||||    
T  29646760 aattacaaggatgaaat 29646776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 401 - 493
Target Start/End: Original strand, 33871653 - 33871745
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    ||||||||||||||||||||||   | ||||||||| |||| |||||||  || || |||||| |||||||||| | | ||||||||||||||    
T  33871653 gacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattactgattacagagactaatttttaaatggcgcctaattgcaagga 33871745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 397 - 489
Target Start/End: Complemental strand, 40149013 - 40148921
Alignment:
Q  397 gagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgca 489  Q
    ||||||| || | ||||||||||||| |||  ||||||||||||| ||||||||||| || |  |||||||||||||| || | |||||||||    
T  40149013 gagggaccaattcttaaatgattaaactttgaaagggtaatttgctaggattaacgattacatggaccaatttttaaatgagctctaattgca 40148921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 402 - 493
Target Start/End: Complemental strand, 8875559 - 8875468
Alignment:
Q  402 acgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||   | |||| |||| |||| ||||||||||| || || ||| |||||||||| ||| | ||||||||||||    
T  8875559 acgaaattttaaatgattaaacaatgcaagtgtaaattgccaggattaacgattacagggactaatttttaaatgacgcttaattgcaagga 8875468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 401 - 488
Target Start/End: Complemental strand, 38475144 - 38475057
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgc 488  Q
    |||||||||||||||||||||   || ||||| || ||||||||||||| |||||| |  |||||||||||||| ||||  |||||||    
T  38475144 gacgaaattttaaatgattaatgattgcaaggttagtttgcaaggattagcgaatacatggaccaatttttaaatgacctttaattgc 38475057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 375 - 421
Target Start/End: Original strand, 297274 - 297320
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaa 421  Q
    ||||||| |||||||| || |||||||||||||||||||||||||||    
T  297274 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 297320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 480
Target Start/End: Original strand, 15645026 - 15645108
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgaccc 480  Q
    |||||||||||||||||||||||||||||   |||| ||  ||  |||||||||||||| | | ||||||||||||| |||||    
T  15645026 agggacgaaattttaaatgattaaattttgggagggcaaaatgtcaggattaacgaatacataaaccaatttttaaatgaccc 15645108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 405 - 498
Target Start/End: Complemental strand, 5326164 - 5326071
Alignment:
Q  405 aaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaa 498  Q
    |||||||||| |||||||||||  ||||| ||  ||| |||||||| ||||  || ||||| |||||||| |||||||| ||||| ||||||||    
T  5326164 aaattttaaaagattaaattttgaaagggcaaaatgccaggattaaggaatgcagggaccattttttaaatgacccctatttgcagggattaaa 5326071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 400 - 489
Target Start/End: Complemental strand, 20152893 - 20152804
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgca 489  Q
    |||||||||||||||||||||||   | ||||||||| || | ||||||| ||| || |||||| |||||||||| ||| | ||||||||    
T  20152893 ggacgaaattttaaatgattaaacaatgcaagggtaaatttccaggattagcgattacagagactaatttttaaatgacgcttaattgca 20152804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 377 - 422
Target Start/End: Original strand, 28269681 - 28269726
Alignment:
Q  377 tggcaatgattaagaggtgagagggacgaaattttaaatgattaaa 422  Q
    ||||| |||||||| || ||||||||||||||||||||||||||||    
T  28269681 tggcagtgattaagtggggagagggacgaaattttaaatgattaaa 28269726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 400 - 493
Target Start/End: Complemental strand, 33871451 - 33871358
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||   | ||||||||| |||| || |||| ||| || || ||| |||||||||| ||| | ||||||||||||    
T  33871451 ggacgaaattttaaatgattaaacaatgcaagggtaaattgccagaattagcgattacagggactaatttttaaatgacacttaattgcaagga 33871358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 407 - 499
Target Start/End: Original strand, 20840760 - 20840852
Alignment:
Q  407 attttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||   || ||||  || ||||| ||||||| ||| || ||  |||||||||||||||||||||||||| |||||| ||||    
T  20840760 attttaaatgattaatgattgcaagactagtttgctaggattagcgattacagttaccaatttttaaacgacccctaattgtaaggatgaaat 20840852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 499
Target Start/End: Original strand, 30096822 - 30096957
Alignment:
Q  364 ctaatcggtgacgtggcaatgattaag-aggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagaga 462  Q
    ||||||||||| |||||| |||||||  ||||  ||||||| || |||||| ||||||| |||||  ||||||| |||| || ||||| | ||| || ||    
T  30096822 ctaatcggtgatgtggcactgattaactaggtt-gagggaccaatttttaagtgattaatttttaggagggtaaattgccagaattaatggatacaggga 30096920  T
Q  463 ccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||| |||||||| ||||||||||| || |||| ||||    
T  30096921 ccattttttaaatgacccctaattacagggatgaaat 30096957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 377 - 421
Target Start/End: Original strand, 31482664 - 31482708
Alignment:
Q  377 tggcaatgattaagaggtgagagggacgaaattttaaatgattaa 421  Q
    ||||| |||||||| || |||||||||||||||||||||||||||    
T  31482664 tggcagtgattaagtggggagagggacgaaattttaaatgattaa 31482708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #88
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 479
Target Start/End: Complemental strand, 6301655 - 6301576
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacc 479  Q
    |||||||||||||||| |||||   || ||||  || ||||||||||||| |||||| |  |||||||||||||||||||    
T  6301655 ggacgaaattttaaataattaatgattgcaagactagtttgcaaggattagcgaatacaaggaccaatttttaaacgacc 6301576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #89
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 422
Target Start/End: Complemental strand, 8322533 - 8322494
Alignment:
Q  383 tgattaagaggtgagagggacgaaattttaaatgattaaa 422  Q
    |||||||| || ||||||||||||||||||||||||||||    
T  8322533 tgattaagtggggagagggacgaaattttaaatgattaaa 8322494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #90
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 422
Target Start/End: Complemental strand, 11047578 - 11047527
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaa 422  Q
    ||||| ||||| |||||||| || ||||| ||||||||||||||||||||||    
T  11047578 gtgacatggcagtgattaagtggggagagagacgaaattttaaatgattaaa 11047527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #91
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 498
Target Start/End: Complemental strand, 14848868 - 14848753
Alignment:
Q  383 tgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccct 482  Q
    |||||||| || | ||||||| ||||||||||||||||||||||   |||| ||  |||||||||||| ||||  | | |||| |||||||| || ||||    
T  14848868 tgattaagtggggggagggaccaaattttaaatgattaaattttgggagggaaaaatgcaaggattaaggaatgcacaaaccattttttaaatgatccct 14848769  T
Q  483 aattgcaaggattaaa 498  Q
    | ||||| ||| ||||    
T  14848768 atttgcagggactaaa 14848753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #92
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 14848994 - 14849049
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaatttt 426  Q
    |||| |||||| |||||||| || | ||||||| ||||||||||||||||||||||    
T  14848994 gtgatgtggcagtgattaagtggggtgagggaccaaattttaaatgattaaatttt 14849049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #93
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 434 - 477
Target Start/End: Original strand, 18670500 - 18670543
Alignment:
Q  434 taatttgcaaggattaacgaatagagagaccaatttttaaacga 477  Q
    |||||||||||||||  |||||| ||||||||||||||||||||    
T  18670500 taatttgcaaggattggcgaatacagagaccaatttttaaacga 18670543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #94
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 375 - 421
Target Start/End: Complemental strand, 1506104 - 1506058
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaa 421  Q
    ||||||| |||||||| || |||||||||||||||||||| ||||||    
T  1506104 cgtggcagtgattaagtggggagagggacgaaattttaaacgattaa 1506058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #95
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 331 - 429
Target Start/End: Complemental strand, 20857115 - 20857015
Alignment:
Q  331 aggggtatttttgtcagttcacat--catcttttgctaatcgg-tgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaatttta 427  Q
    |||||||||||||||| ||| |||  ||| ||||||||||  | |||||||||| |||||||  ||  ||||||||||||||| |||||||||| |||||    
T  20857115 aggggtatttttgtcaattcccatgccat-ttttgctaatttgatgacgtggcagtgattaaccgggaagagggacgaaatttcaaatgattaactttta 20857017  T
Q  428 ca 429  Q
    ||    
T  20857016 ca 20857015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #96
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 429
Target Start/End: Complemental strand, 22869745 - 22869688
Alignment:
Q  372 tgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttaca 429  Q
    |||||||||| |||||||  ||  ||||||||||||||||||||| |||| |||||||    
T  22869745 tgacgtggcagtgattaaccgggaagagggacgaaattttaaatggttaatttttaca 22869688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #97
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 429
Target Start/End: Original strand, 22870422 - 22870479
Alignment:
Q  372 tgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttaca 429  Q
    |||||||||| |||||||  ||  |||| ||||||||||||||||||||| |||||||    
T  22870422 tgacgtggcagtgattaatcgggaagagagacgaaattttaaatgattaatttttaca 22870479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #98
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 493
Target Start/End: Original strand, 41930801 - 41930894
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||| |||||||||||||||||   || ||||| ||| |||||||||||| | | || || ||| |||||||||| ||| ||||||| ||||||    
T  41930801 ggaccaaattttaaatgattaacaattgcaaggctaaattgcaaggattagcaattacagggacgaatttttaaatgacgcctaattacaagga 41930894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #99
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 371 - 450
Target Start/End: Complemental strand, 13362368 - 13362289
Alignment:
Q  371 gtgacgtggcaatgattaaga-ggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaa 450  Q
    ||||||||||| ||||||||  ||| ||||| ||||||||||||||||||||   || ||||| || ||||||||||||||    
T  13362368 gtgacgtggcagtgattaagttggtcagagg-acgaaattttaaatgattaatgattgcaaggctagtttgcaaggattaa 13362289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #100
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 329 - 429
Target Start/End: Original strand, 20857462 - 20857564
Alignment:
Q  329 ttaggggtatttttgtcagttcacat--catcttttgctaatcgg-tgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattt 425  Q
    |||||||||||||||||| ||| |||  ||| ||||||||||  | ||| |||||| |||||||  ||  ||||||||||||||| |||||||||| |||    
T  20857462 ttaggggtatttttgtcaattcccatgccat-ttttgctaatttgatgaggtggcagtgattaaccgggaagagggacgaaatttcaaatgattaacttt 20857560  T
Q  426 taca 429  Q
    ||||    
T  20857561 taca 20857564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 65; Significance: 3e-28; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 371 - 499
Target Start/End: Complemental strand, 69106 - 68978
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttt 470  Q
    ||||||||||| |||||||| || ||||||||||||||||||||||||||||   | ||||||||| |||| |||||||  || || || ||||||||||    
T  69106 gtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagtgattacagggaccaatttt 69007  T
Q  471 taaacgacccctaattgcaaggattaaat 499  Q
    |||| ||||||||||||||||||| ||||    
T  69006 taaatgacccctaattgcaaggatgaaat 68978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 69281 - 69380
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||| || ||||||||||||| |||||| || ||||||||||||||||||  |||||||||||||| ||||    
T  69281 ggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagggaccaatttttaaacgacatctaattgcaaggatgaaat 69380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 61; Significance: 7e-26; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 375 - 499
Target Start/End: Complemental strand, 139809 - 139685
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || |||||||||||||||||||||||||||    | || |||||| |||| ||||||| ||| || || ||||||||||||||    
T  139809 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaatcaattcatgggtaaattgccaggattagcgattacagggaccaatttttaaa 139710  T
Q  475 cgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||| ||||    
T  139709 cgacccctaattgcaaggatcaaat 139685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 139957 - 140056
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||| ||||||||||| |||||   || ||||| || |||||||| ||||  ||||| || ||||||||||||||| |||||||||||||||||| ||||    
T  139957 ggactaaattttaaataattaatgattgcaaggctagtttgcaagaattagtgaatacagggaccaatttttaaacaacccctaattgcaaggatcaaat 140056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 61; Significance: 7e-26; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 375 - 499
Target Start/End: Complemental strand, 1906 - 1782
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || ||||||||||||||||||||||||||||   | ||||||||| |||| | ||||| ||| || || ||||||||||| ||    
T  1906 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccaagattagcgattacagggaccaattttttaa 1807  T
Q  475 cgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||||| ||||    
T  1806 cgacccctaattgcaaggatcaaat 1782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 402 - 499
Target Start/End: Original strand, 2059 - 2156
Alignment:
Q  402 acgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||   || ||||| || ||||||| ||||| | | |  || |||||||||||||||||||||||||||||||||| ||||    
T  2059 acgaaattttaaatgattaatgattgcaaggatagtttgcaaagattagcaatttcagggaccaatttttaaacgacccctaattgcaaggatcaaat 2156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0707 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 6395 - 6494
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    ||||||||||||||||||||||   || ||||| || ||||||||||||| |||||| || |||||||||||||||||||||||||||||||||| ||||    
T  6395 ggacgaaattttaaatgattaatgattgcaaggctactttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattgcaaggatgaaat 6494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 398 - 493
Target Start/End: Original strand, 239865 - 239960
Alignment:
Q  398 agggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    ||||||||||||||||||||||||| |||  ||||||||||||| ||||||| ||| || ||  ||||||||||||| ||||||||| ||||||||    
T  239865 agggacgaaattttaaatgattaaactttggaagggtaatttgccaggattatcgattacaggaaccaatttttaaatgacccctaagtgcaagga 239960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 49; Significance: 1e-18; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 431 - 499
Target Start/End: Original strand, 14737 - 14805
Alignment:
Q  431 gggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||| |||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  14737 gggtaaattgccaggattagcgattagagagaccaatttttaaacgacccctaattgcaaggatgaaat 14805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 405 - 499
Target Start/End: Complemental strand, 14536 - 14442
Alignment:
Q  405 aaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggattaaat 499  Q
    |||||||||||||||||   || ||||| || ||||||||||||| |||||| | |||| |||||||||||||| ||||||||||| ||| ||||    
T  14536 aaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaataaatagactaatttttaaacgactcctaattgcaatgatgaaat 14442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775 (Bit Score: 48; Significance: 4e-18; HSPs: 2)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 400 - 487
Target Start/End: Complemental strand, 5074 - 4987
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattg 487  Q
    ||||||||||||||||||||||   || ||||| || ||||||||||||| |||||| || || ||||||||||||||||||||||||    
T  5074 ggacgaaattttaaatgattaataattgcaaggctagtttgcaaggattagcgaatatagggatcaatttttaaacgacccctaattg 4987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 402 - 493
Target Start/End: Original strand, 6296 - 6387
Alignment:
Q  402 acgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||  || |||||||||||||||||||||| ||| || |  |||||||||||||  ||||||||||| ||||||    
T  6296 acgaaattttaaatgattaaacattgcaagggtaatttgcaaggattatcgattataaggaccaatttttaagtgacccctaatttcaagga 6387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 402 - 493
Target Start/End: Complemental strand, 19967 - 19876
Alignment:
Q  402 acgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||   | ||| |||||||||||||||||| |||  | || |||||||||||||||||||| ||||||||||||    
T  19967 acgaaattttaaatgattaaagaatgcaaaggtaatttgcaaggattagcgatcacagggaccaatttttaaacgacccataattgcaagga 19876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 402 - 493
Target Start/End: Original strand, 12555 - 12646
Alignment:
Q  402 acgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||   | ||||||||| |||| ||||||||||| || || ||| |||||||||| ||| ||||||||||||||    
T  12555 acgaaattttaaatgattaaacaatgcaagggtaaattgccaggattaacgattacagggactaatttttaaatgacgcctaattgcaagga 12646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 401 - 494
Target Start/End: Original strand, 11455 - 11548
Alignment:
Q  401 gacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaaggat 494  Q
    ||||||||||||||||||||||   | ||||||||| |||| ||||||||||| || |  ||| |||||||||| ||| |||||||||||||||    
T  11455 gacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattaacgattacatggactaatttttaaatgacgcctaattgcaaggat 11548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 2)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 375 - 493
Target Start/End: Original strand, 21229 - 21347
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaa 474  Q
    ||||||| |||||||| || |||||||||| ||||||||||||||||   || ||||  ||| |||| | ||||| | | || || ||| ||||||||||    
T  21229 cgtggcagtgattaagtggggagagggacggaattttaaatgattaacaattgcaagactaaattgccatgattagcaattacagggacgaatttttaaa 21328  T
Q  475 cgacccctaattgcaagga 493  Q
    ||||| |||||||||||||    
T  21329 cgacctctaattgcaagga 21347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 405 - 493
Target Start/End: Complemental strand, 21116 - 21028
Alignment:
Q  405 aaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||   || ||||| ||| |||||||||||| | | || || ||| |||||||||| ||| ||||||||||||||    
T  21116 aaattttaaatgattaacaattgcaaggctaaattgcaaggattagcaattacagggacgaatttttaaatgacgcctaattgcaagga 21028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 363 - 427
Target Start/End: Original strand, 14544 - 14608
Alignment:
Q  363 gctaatcggtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaatttta 427  Q
    ||||||| |||| |||||| |||||||| || |||||||||||||| |||||||||||| |||||    
T  14544 gctaatcagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaattttta 14608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 427
Target Start/End: Complemental strand, 13750 - 13694
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaatttta 427  Q
    ||||||||| | |||||||| || |||||||||||||| |||||||||||| |||||    
T  13750 gtgacgtggtagtgattaagtggggagagggacgaaatcttaaatgattaattttta 13694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 36; Significance: 0.00000000006; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 400 - 491
Target Start/End: Complemental strand, 221902 - 221812
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaag 491  Q
    |||||||||||||||||||||||   | ||||||||| |||| ||||||| ||| || | |||| |||||||||| ||| ||||||||||||    
T  221902 ggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattaca-agactaatttttaaatgacgcctaattgcaag 221812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 493
Target Start/End: Original strand, 222103 - 222196
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||   | ||||||||| |||  ||||||| ||| || |   || |||||||||| ||| ||||||||||||||    
T  222103 ggacgaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacatgtactaatttttaaatgacgcctaattgcaagga 222196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0559 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0559
Description:

Target: scaffold0559; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 375 - 421
Target Start/End: Complemental strand, 1370 - 1324
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaa 421  Q
    ||||||| |||||||| || |||||||||||||||||||||||||||    
T  1370 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 1324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 375 - 421
Target Start/End: Original strand, 141854 - 141900
Alignment:
Q  375 cgtggcaatgattaagaggtgagagggacgaaattttaaatgattaa 421  Q
    ||||||| |||||||| || |||||||||||||||||||||||||||    
T  141854 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 141900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 400 - 493
Target Start/End: Complemental strand, 2505 - 2412
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||   | ||||||||| |||| ||||||| ||| || || ||  |||||||||| |||  |||||||||||||    
T  2505 ggacgaaattttaaatgattaaacaatgcaagggtaaattgctaggattagcgattacagggattaatttttaaatgacgtctaattgcaagga 2412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 423
Target Start/End: Complemental strand, 2283 - 2232
Alignment:
Q  372 tgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaat 423  Q
    |||| ||||| |||||||| || ||||||||| |||||||||||||||||||    
T  2283 tgacatggcagtgattaagtggggagagggacaaaattttaaatgattaaat 2232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 14078 - 14132
Alignment:
Q  371 gtgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaatttt 426  Q
    |||||||| ||||||||||| || | ||||||| ||||||||||||||||||||||    
T  14078 gtgacgtgacaatgattaagtgggg-gagggaccaaattttaaatgattaaatttt 14132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 372 - 474
Target Start/End: Complemental strand, 23371 - 23269
Alignment:
Q  372 tgacgtggcaatgattaagaggtgagagggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaattttt 471  Q
    |||||||||| |||||||| || | |||  || |||||||||||||||||| |||  |||| ||  |||  ||||||||| |||| | ||||||||||||    
T  23371 tgacgtggcagtgattaagtggggggagaaaccaaattttaaatgattaaactttggaaggatagattgacaggattaacaaatacatagaccaattttt 23272  T
Q  472 aaa 474  Q
    |||    
T  23271 aaa 23269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 493
Target Start/End: Complemental strand, 1032 - 939
Alignment:
Q  400 ggacgaaattttaaatgattaaattttacaagggtaatttgcaaggattaacgaatagagagaccaatttttaaacgacccctaattgcaagga 493  Q
    |||||||||||||||||||||||   | ||||||||| |||| | ||||| ||| || |  ||| |||||||||| ||  ||||||||||||||    
T  1032 ggacgaaattttaaatgattaaacaatgcaagggtaaattgccaagattagcgattacatggactaatttttaaatgatgcctaattgcaagga 939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University