View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14712_high_27 (Length: 231)
Name: NF14712_high_27
Description: NF14712
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14712_high_27 |
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Alignment Details
Target: chr7 (Bit Score: 146; Significance: 5e-77; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 22 - 217
Target Start/End: Original strand, 28465201 - 28465396
Alignment:
| Q |
22 |
caataaaagtgcgagggactaattttgctcaaaaatgttatgcgtcaacaattttttccagggtccccnnnnnnncaaaannnnnnncccaaggtgacat |
121 |
Q |
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| T |
28465201 |
caataaaagtgcgagggactaattttgctcaaaaatgttatgcgtcaacaattttttccagggtccccaaaaaaacaaattttttttcccaaggtaacat |
28465300 |
T |
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| Q |
122 |
agtaaccaacatgttagcaccaatcggtcaaatatgactcaaaattaatagagtgaataatttgtggtcatataaaaatgttaacaacgtcgttat |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28465301 |
agtaaccaacatgttagcaccaatcggtcaaatatgactcaaaattaatagagtgaataatttgtggtcatataaaaatgttaacaacgtcgttat |
28465396 |
T |
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