View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14712_low_25 (Length: 242)
Name: NF14712_low_25
Description: NF14712
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14712_low_25 |
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Alignment Details
Target: chr8 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 9526616 - 9526839
Alignment:
| Q |
1 |
tttagccggggcagattccgtatacaactacagagactaattctacgatataactgatatttatttaagatgccgatctctcccaacatttttggttctt |
100 |
Q |
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| T |
9526616 |
tttaaccggggcagattccgtatacaactacagagactaattctacgatataactgatatttatttaagatgccgatctctcccaacatttttggttctt |
9526715 |
T |
|
| Q |
101 |
tataaacctaagtatcgaacatttgaccacatacttaaaagattaaatgtcaataacatgtcattggtaaatgatcaaatgttatcggtatactttttat |
200 |
Q |
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| T |
9526716 |
tataaacttaagtatcgaacatttgactacatacttaaaagattaaatgtcaataatatgtcattggtaaatgatcaaatgttatcggtatactttttat |
9526815 |
T |
|
| Q |
201 |
atttgtacttctatgaggtatcta |
224 |
Q |
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|||||||||||||||||||||||| |
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| T |
9526816 |
atttgtacttctatgaggtatcta |
9526839 |
T |
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