View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14712_low_27 (Length: 234)

Name: NF14712_low_27
Description: NF14712
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14712_low_27
NF14712_low_27
[»] chr4 (50 HSPs)
chr4 (15-199)||(52824120-52824300)
chr4 (15-79)||(20435250-20435314)
chr4 (15-76)||(530779-530840)
chr4 (15-76)||(55107524-55107585)
chr4 (15-78)||(1298910-1298973)
chr4 (23-80)||(24969537-24969594)
chr4 (183-228)||(52824052-52824097)
chr4 (19-75)||(18417658-18417714)
chr4 (16-76)||(24969655-24969715)
chr4 (23-75)||(32318721-32318773)
chr4 (23-78)||(24915792-24915847)
chr4 (15-77)||(13204376-13204438)
chr4 (19-80)||(4552781-4552842)
chr4 (16-77)||(16995665-16995726)
chr4 (16-77)||(27434609-27434670)
chr4 (21-74)||(37525059-37525112)
chr4 (23-79)||(13204495-13204551)
chr4 (23-79)||(42274489-42274545)
chr4 (19-75)||(42274607-42274663)
chr4 (23-78)||(530667-530722)
chr4 (23-78)||(21048703-21048758)
chr4 (23-77)||(1299030-1299084)
chr4 (19-77)||(3422543-3422601)
chr4 (23-80)||(4552903-4552960)
chr4 (23-76)||(20435140-20435193)
chr4 (23-76)||(27434728-27434781)
chr4 (23-75)||(4688248-4688300)
chr4 (15-75)||(4688358-4688418)
chr4 (15-79)||(35360674-35360737)
chr4 (23-79)||(43486197-43486253)
chr4 (23-79)||(55107642-55107698)
chr4 (15-78)||(24915909-24915971)
chr4 (19-78)||(47465098-47465157)
chr4 (23-77)||(18417775-18417829)
chr4 (15-77)||(28809957-28810019)
chr4 (19-81)||(32318834-32318896)
chr4 (18-79)||(11330103-11330164)
chr4 (23-80)||(23928564-23928620)
chr4 (19-76)||(23928681-23928738)
chr4 (23-76)||(55049400-55049453)
chr4 (15-78)||(4894967-4895033)
chr4 (23-79)||(36030936-36030992)
chr4 (23-62)||(2272484-2272523)
chr4 (15-46)||(21048814-21048845)
chr4 (17-76)||(28573947-28574006)
chr4 (22-72)||(2272371-2272421)
chr4 (23-77)||(3422428-3422482)
chr4 (23-77)||(35360794-35360847)
chr4 (18-72)||(42020203-42020257)
chr4 (17-73)||(56552064-56552120)
[»] chr7 (47 HSPs)
chr7 (15-80)||(38528522-38528587)
chr7 (15-79)||(31231726-31231790)
chr7 (15-77)||(10936580-10936642)
chr7 (15-80)||(24836016-24836081)
chr7 (15-77)||(38883220-38883282)
chr7 (15-80)||(20184349-20184414)
chr7 (15-76)||(34052279-34052340)
chr7 (23-80)||(35339274-35339331)
chr7 (15-79)||(9285824-9285888)
chr7 (15-79)||(9289891-9289955)
chr7 (15-79)||(30594690-30594754)
chr7 (15-75)||(35665726-35665786)
chr7 (17-76)||(29277838-29277897)
chr7 (15-78)||(30259176-30259239)
chr7 (15-74)||(35339388-35339447)
chr7 (18-77)||(35665632-35665691)
chr7 (24-78)||(33721825-33721879)
chr7 (16-78)||(47237539-47237601)
chr7 (15-76)||(3953152-3953213)
chr7 (23-76)||(24836138-24836191)
chr7 (19-76)||(38883335-38883392)
chr7 (19-76)||(39617956-39618012)
chr7 (23-79)||(3953039-3953095)
chr7 (15-79)||(48103365-48103429)
chr7 (23-78)||(34052397-34052452)
chr7 (19-76)||(12142192-12142249)
chr7 (23-76)||(20184238-20184291)
chr7 (23-76)||(31231614-31231667)
chr7 (23-76)||(48103483-48103536)
chr7 (25-76)||(39143826-39143877)
chr7 (31-81)||(17101649-17101699)
chr7 (18-76)||(24123755-24123813)
chr7 (15-77)||(25742541-25742603)
chr7 (23-77)||(30259065-30259119)
chr7 (16-53)||(7955004-7955041)
chr7 (23-76)||(10936470-10936523)
chr7 (15-72)||(38528394-38528451)
chr7 (23-76)||(45997508-45997561)
chr7 (23-78)||(30594811-30594866)
chr7 (15-82)||(45997618-45997685)
chr7 (23-77)||(12142311-12142365)
chr7 (23-76)||(9285714-9285767)
chr7 (23-76)||(9289781-9289834)
chr7 (31-76)||(17101700-17101745)
chr7 (23-79)||(37093886-37093942)
chr7 (23-75)||(39143713-39143765)
chr7 (17-57)||(40596797-40596837)
[»] chr3 (71 HSPs)
chr3 (18-79)||(35368546-35368607)
chr3 (15-78)||(45487797-45487860)
chr3 (15-77)||(21969267-21969329)
chr3 (15-77)||(21991703-21991765)
chr3 (15-76)||(36822870-36822931)
chr3 (15-79)||(12789603-12789667)
chr3 (15-78)||(4072384-4072447)
chr3 (15-78)||(36657543-36657606)
chr3 (15-81)||(5529886-5529952)
chr3 (15-77)||(25488451-25488513)
chr3 (15-77)||(25561010-25561072)
chr3 (15-77)||(32237504-32237566)
chr3 (15-77)||(36329290-36329352)
chr3 (15-77)||(38125289-38125351)
chr3 (15-76)||(32362861-32362922)
chr3 (18-83)||(39850337-39850402)
chr3 (15-75)||(10017115-10017175)
chr3 (15-75)||(10254569-10254629)
chr3 (15-79)||(10441368-10441432)
chr3 (23-79)||(21969154-21969210)
chr3 (23-79)||(21991590-21991646)
chr3 (15-78)||(3970601-3970664)
chr3 (18-77)||(36822759-36822818)
chr3 (23-78)||(50099552-50099607)
chr3 (17-79)||(1476663-1476725)
chr3 (15-77)||(25446250-25446310)
chr3 (19-77)||(26906453-26906511)
chr3 (19-77)||(36657432-36657490)
chr3 (19-77)||(39850459-39850517)
chr3 (23-77)||(45487917-45487971)
chr3 (15-73)||(45713013-45713071)
chr3 (15-72)||(8831744-8831801)
chr3 (15-80)||(12838073-12838138)
chr3 (23-76)||(22101283-22101336)
chr3 (23-76)||(22176227-22176280)
chr3 (19-76)||(36278870-36278927)
chr3 (15-76)||(55340404-55340465)
chr3 (23-75)||(8831859-8831911)
chr3 (15-75)||(10117516-10117576)
chr3 (23-79)||(10117629-10117685)
chr3 (23-78)||(25446368-25446422)
chr3 (19-74)||(43639196-43639251)
chr3 (23-77)||(3970490-3970544)
chr3 (23-77)||(4072272-4072326)
chr3 (15-80)||(157079-157144)
chr3 (23-76)||(13078163-13078216)
chr3 (15-76)||(13078273-13078334)
chr3 (19-72)||(26976956-26977009)
chr3 (16-77)||(37506237-37506298)
chr3 (15-76)||(43150480-43150541)
chr3 (23-75)||(10254687-10254739)
chr3 (19-79)||(10441255-10441315)
chr3 (23-74)||(32237396-32237447)
chr3 (23-77)||(26906572-26906626)
chr3 (23-77)||(35368851-35368905)
chr3 (23-77)||(36278755-36278809)
chr3 (23-79)||(12838195-12838251)
chr3 (15-47)||(22101193-22101225)
chr3 (15-47)||(22176137-22176169)
chr3 (23-79)||(25561129-25561185)
chr3 (23-79)||(26976839-26976895)
chr3 (15-79)||(46664173-46664237)
chr3 (23-74)||(404163-404213)
chr3 (28-75)||(10017232-10017279)
chr3 (27-78)||(43639079-43639130)
chr3 (15-62)||(50099446-50099493)
chr3 (19-77)||(404043-404101)
chr3 (18-72)||(5530005-5530059)
chr3 (23-72)||(297541-297590)
chr3 (23-76)||(25488341-25488394)
chr3 (15-79)||(13724098-13724162)
[»] chr6 (30 HSPs)
chr6 (15-79)||(21380051-21380115)
chr6 (15-75)||(8091063-8091123)
chr6 (15-77)||(885384-885446)
chr6 (15-76)||(4238852-4238913)
chr6 (18-75)||(7808722-7808779)
chr6 (15-76)||(11687253-11687314)
chr6 (15-80)||(13439691-13439756)
chr6 (15-76)||(20501706-20501767)
chr6 (16-77)||(29609000-29609061)
chr6 (19-77)||(11687142-11687200)
chr6 (23-77)||(21379940-21379994)
chr6 (15-76)||(3368985-3369046)
chr6 (21-78)||(4890597-4890654)
chr6 (23-80)||(15546750-15546807)
chr6 (15-79)||(15546629-15546693)
chr6 (15-79)||(18998227-18998291)
chr6 (23-78)||(8091180-8091235)
chr6 (23-79)||(6433687-6433743)
chr6 (15-75)||(7808610-7808670)
chr6 (15-78)||(4179136-4179198)
chr6 (23-78)||(13172572-13172627)
chr6 (15-62)||(14393575-14393622)
chr6 (25-76)||(17367064-17367115)
chr6 (23-77)||(885503-885557)
chr6 (23-77)||(4890479-4890533)
chr6 (23-77)||(14393682-14393736)
chr6 (18-72)||(20501819-20501872)
chr6 (15-72)||(4076637-4076693)
chr6 (15-79)||(13172683-13172748)
chr6 (23-71)||(4238972-4239020)
[»] chr1 (62 HSPs)
chr1 (15-79)||(49285085-49285149)
chr1 (15-78)||(5189467-5189530)
chr1 (15-77)||(19797091-19797153)
chr1 (19-80)||(50627245-50627306)
chr1 (15-75)||(9978162-9978222)
chr1 (15-79)||(15324623-15324687)
chr1 (15-79)||(42561405-42561469)
chr1 (15-79)||(47940681-47940745)
chr1 (15-78)||(3607839-3607902)
chr1 (15-77)||(4299505-4299567)
chr1 (15-77)||(50627130-50627192)
chr1 (15-76)||(27926362-27926423)
chr1 (15-75)||(14387125-14387185)
chr1 (23-78)||(19954909-19954964)
chr1 (15-78)||(19955021-19955084)
chr1 (19-78)||(27241038-27241097)
chr1 (15-78)||(36880287-36880350)
chr1 (18-77)||(36880624-36880683)
chr1 (16-79)||(51789706-51789769)
chr1 (19-77)||(2854646-2854704)
chr1 (23-77)||(27240923-27240977)
chr1 (19-77)||(48954328-48954386)
chr1 (19-76)||(23698616-23698673)
chr1 (23-76)||(27926251-27926304)
chr1 (23-72)||(27928302-27928351)
chr1 (15-76)||(27928408-27928469)
chr1 (15-76)||(40647116-40647177)
chr1 (23-79)||(362475-362531)
chr1 (15-79)||(2125180-2125244)
chr1 (23-79)||(47940567-47940623)
chr1 (15-78)||(1387778-1387839)
chr1 (17-72)||(22339096-22339151)
chr1 (15-74)||(50162649-50162708)
chr1 (16-75)||(51276806-51276865)
chr1 (15-77)||(9895252-9895314)
chr1 (18-75)||(1387891-1387948)
chr1 (23-76)||(2125070-2125123)
chr1 (23-80)||(2854528-2854585)
chr1 (23-76)||(9978051-9978104)
chr1 (18-75)||(19796982-19797039)
chr1 (23-80)||(23698498-23698555)
chr1 (24-76)||(25297966-25298018)
chr1 (23-79)||(51789594-51789650)
chr1 (23-62)||(15324745-15324784)
chr1 (23-78)||(48954212-48954267)
chr1 (23-77)||(29598455-29598509)
chr1 (23-77)||(40647236-40647290)
chr1 (23-77)||(42561294-42561348)
chr1 (15-76)||(21930380-21930441)
chr1 (19-80)||(28447987-28448048)
chr1 (23-78)||(957707-957762)
chr1 (23-74)||(5189587-5189638)
chr1 (23-74)||(14387017-14387068)
chr1 (23-78)||(21930496-21930551)
chr1 (23-78)||(26208543-26208598)
chr1 (15-49)||(26208451-26208485)
chr1 (23-61)||(27670261-27670299)
chr1 (15-76)||(6079384-6079445)
chr1 (16-72)||(28243957-28244018)
chr1 (15-60)||(48645124-48645168)
chr1 (23-72)||(50856325-50856374)
chr1 (20-79)||(46691208-46691268)
[»] chr2 (48 HSPs)
chr2 (15-78)||(16705731-16705794)
chr2 (15-77)||(3116875-3116937)
chr2 (15-77)||(34490455-34490517)
chr2 (18-77)||(34490569-34490628)
chr2 (15-77)||(1924091-1924153)
chr2 (15-77)||(20892883-20892945)
chr2 (15-77)||(23835875-23835937)
chr2 (18-79)||(24101829-24101890)
chr2 (15-76)||(24101942-24102003)
chr2 (15-76)||(34455885-34455946)
chr2 (15-79)||(9933679-9933743)
chr2 (15-78)||(45408623-45408686)
chr2 (19-77)||(9281461-9281519)
chr2 (23-76)||(2818784-2818837)
chr2 (15-76)||(29229474-29229534)
chr2 (15-76)||(29342774-29342834)
chr2 (23-79)||(1923977-1924033)
chr2 (15-71)||(2818671-2818727)
chr2 (15-77)||(6605737-6605796)
chr2 (15-79)||(42713888-42713952)
chr2 (23-78)||(7737183-7737238)
chr2 (23-78)||(27920690-27920745)
chr2 (29-79)||(6605858-6605908)
chr2 (15-85)||(27920564-27920633)
chr2 (23-80)||(3116994-3117051)
chr2 (15-76)||(12850652-12850713)
chr2 (17-78)||(20892997-20893057)
chr2 (15-76)||(22269722-22269783)
chr2 (23-76)||(45408743-45408796)
chr2 (15-75)||(7737065-7737125)
chr2 (23-79)||(9933567-9933622)
chr2 (21-77)||(22269838-22269894)
chr2 (23-79)||(42713774-42713830)
chr2 (23-79)||(43858552-43858608)
chr2 (17-72)||(7116374-7116429)
chr2 (23-76)||(16705851-16705904)
chr2 (23-80)||(17500002-17500059)
chr2 (23-75)||(10552999-10553051)
chr2 (16-52)||(22346486-22346522)
chr2 (15-75)||(9850867-9850923)
chr2 (19-78)||(37340964-37341023)
chr2 (17-72)||(39243095-39243150)
chr2 (23-77)||(43476064-43476118)
chr2 (23-76)||(9281347-9281400)
chr2 (25-79)||(29229358-29229414)
chr2 (25-79)||(29342658-29342714)
chr2 (24-76)||(8111692-8111744)
chr2 (23-55)||(9850779-9850811)
[»] scaffold0595 (2 HSPs)
scaffold0595 (15-77)||(5700-5762)
scaffold0595 (23-78)||(5823-5880)
[»] chr5 (43 HSPs)
chr5 (15-77)||(1138558-1138620)
chr5 (15-80)||(35420722-35420787)
chr5 (15-79)||(15855840-15855904)
chr5 (15-78)||(20476429-20476492)
chr5 (15-74)||(24397356-24397415)
chr5 (23-79)||(33629342-33629398)
chr5 (19-79)||(35420609-35420669)
chr5 (15-78)||(4265980-4266043)
chr5 (19-82)||(16473069-16473132)
chr5 (23-78)||(20476549-20476604)
chr5 (15-77)||(16472954-16473016)
chr5 (21-74)||(2255578-2255631)
chr5 (19-76)||(15855957-15856014)
chr5 (29-78)||(21259728-21259777)
chr5 (23-78)||(13754289-13754344)
chr5 (18-77)||(19976260-19976319)
chr5 (23-77)||(10132372-10132426)
chr5 (15-77)||(21259840-21259902)
chr5 (16-62)||(35806949-35806995)
chr5 (19-72)||(8364744-8364797)
chr5 (23-78)||(1138677-1138732)
chr5 (23-78)||(4266100-4266155)
chr5 (19-78)||(10132280-10132339)
chr5 (28-79)||(29141802-29141853)
chr5 (15-77)||(12807911-12807972)
chr5 (15-49)||(21261970-21262004)
chr5 (19-76)||(1164910-1164967)
chr5 (15-76)||(13754401-13754462)
chr5 (23-76)||(21591213-21591266)
chr5 (23-76)||(21595330-21595383)
chr5 (24-73)||(25751570-25751619)
chr5 (23-72)||(32623219-32623268)
chr5 (23-79)||(37552305-37552361)
chr5 (16-72)||(42522931-42522987)
chr5 (33-80)||(17583367-17583414)
chr5 (19-78)||(33629461-33629520)
chr5 (23-78)||(43539225-43539280)
chr5 (15-76)||(37655261-37655316)
chr5 (28-77)||(780915-780964)
chr5 (15-75)||(12744829-12744887)
chr5 (15-79)||(26152718-26152782)
chr5 (17-77)||(35276405-35276465)
chr5 (15-79)||(43539105-43539168)
[»] chr8 (33 HSPs)
chr8 (15-80)||(15882196-15882261)
chr8 (15-79)||(12234463-12234527)
chr8 (23-80)||(15882319-15882376)
chr8 (20-77)||(17426745-17426802)
chr8 (15-76)||(23940915-23940976)
chr8 (23-79)||(24211275-24211331)
chr8 (15-75)||(37114239-37114299)
chr8 (23-78)||(17426626-17426681)
chr8 (15-78)||(29781069-29781132)
chr8 (18-76)||(33100645-33100703)
chr8 (15-77)||(38629473-38629535)
chr8 (15-76)||(24211388-24211449)
chr8 (15-75)||(33100755-33100815)
chr8 (23-79)||(35467288-35467344)
chr8 (23-74)||(40891131-40891182)
chr8 (23-77)||(8210322-8210376)
chr8 (15-77)||(11828713-11828775)
chr8 (23-77)||(24741822-24741876)
chr8 (23-77)||(38629592-38629646)
chr8 (16-80)||(35467167-35467231)
chr8 (19-79)||(38520015-38520075)
chr8 (23-62)||(4261990-4262029)
chr8 (23-78)||(38520136-38520191)
chr8 (19-77)||(4035740-4035798)
chr8 (23-72)||(14834676-14834725)
chr8 (17-62)||(24741935-24741980)
chr8 (15-75)||(5356234-5356294)
chr8 (16-47)||(10778686-10778717)
chr8 (23-78)||(12234585-12234640)
chr8 (23-78)||(23940802-23940857)
chr8 (16-79)||(38405135-38405198)
chr8 (23-72)||(29780963-29781012)
chr8 (17-72)||(36898266-36898322)
[»] scaffold0122 (2 HSPs)
scaffold0122 (15-79)||(45831-45895)
scaffold0122 (23-76)||(45952-46005)
[»] scaffold0069 (1 HSPs)
scaffold0069 (17-78)||(26403-26464)
[»] scaffold0653 (2 HSPs)
scaffold0653 (15-79)||(3503-3567)
scaffold0653 (23-76)||(3393-3446)
[»] scaffold0107 (2 HSPs)
scaffold0107 (19-79)||(51060-51120)
scaffold0107 (23-82)||(51181-51240)
[»] scaffold0006 (1 HSPs)
scaffold0006 (15-80)||(72381-72445)
[»] scaffold0163 (2 HSPs)
scaffold0163 (18-76)||(2053-2111)
scaffold0163 (23-79)||(1936-1992)
[»] scaffold0086 (2 HSPs)
scaffold0086 (23-75)||(48244-48296)
scaffold0086 (15-78)||(48124-48187)
[»] scaffold0118 (2 HSPs)
scaffold0118 (15-78)||(14440-14503)
scaffold0118 (23-75)||(14560-14612)
[»] scaffold0188 (2 HSPs)
scaffold0188 (19-77)||(7085-7143)
scaffold0188 (23-77)||(7204-7258)
[»] scaffold0137 (1 HSPs)
scaffold0137 (19-79)||(10113-10173)


Alignment Details
Target: chr4 (Bit Score: 152; Significance: 1e-80; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 15 - 199
Target Start/End: Complemental strand, 52824300 - 52824120
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctttagataactcaccccaactaggttgagtgagcttaa 114  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52824300 tatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcctttagataactcaccccaactaggttgagtgagcttaa 52824201  T
Q  115 aaatgagatgaatactaacggattgattctagattcatcagaattaagctaggcagtctcgtccacaaagaaagtaacaactact 199  Q
    |||||||||||||||||||    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  52824200 aaatgagatgaatactaac----tgattctagattcatcggaattaagctaggcagtctcgtccacaaagaaagtaacaactact 52824120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 20435250 - 20435314
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  20435250 tatgtatttttagttaagaaccatacgaaaagcacctaaagaattgtacctaagttttctccttt 20435314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 530779 - 530840
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||    
T  530779 tatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 530840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 55107585 - 55107524
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||    
T  55107585 tatgtatttttagttaagaaccatatgaaaagcacataaggaattgtacctaagttttctcc 55107524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 1298973 - 1298910
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    |||||||||||||||||||||||||| |||||||| ||| |||||||| |||||||||||||||    
T  1298973 tatgtatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctcctt 1298910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 24969594 - 24969537
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttta 80  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||    
T  24969594 tttagttaagaaccatacgaaaagcacctaaagaattgtacctaagttttctgcttta 24969537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 183 - 228
Target Start/End: Complemental strand, 52824097 - 52824052
Alignment:
Q  183 agaaagtaacaactactaagagttcataaaaactgattgatggtat 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  52824097 agaaagtaacaactactaagagttcataaaaactgattgatggtat 52824052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 18417714 - 18417658
Alignment:
Q  19 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctc 75  Q
    ||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||    
T  18417714 tatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctc 18417658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 24969655 - 24969715
Alignment:
Q  16 atgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    |||||||||||||||||||| ||||||||||||| ||| |||||||| |||||||||||||    
T  24969655 atgtatttttagttaagaactatacgaaaagcacctaaggaattgtacctaagttttctcc 24969715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 32318773 - 32318721
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctc 75  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  32318773 tttagttaagaaccatacgaaaagcacataaggaattgtacctaagttttctc 32318721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 24915847 - 24915792
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    ||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  24915847 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcctt 24915792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 13204438 - 13204376
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    |||||||||||||||||||||||||| ||||| || |||  ||||||||||||||||||||||    
T  13204438 tatgtatttttagttaagaaccatacaaaaagtacctaagtaattgtatctaagttttctcct 13204376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 4552842 - 4552781
Alignment:
Q  19 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttta 80  Q
    ||||||||||||| ||||||| ||||||||| ||| |||||||| |||||||||||||||||    
T  4552842 tatttttagttaaaaaccatatgaaaagcacttaaggaattgtacctaagttttctccttta 4552781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 16995665 - 16995726
Alignment:
Q  16 atgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    ||||||| |||||||| ||||||||||||| ||| |||||||||||||||||||||| ||||    
T  16995665 atgtattgttagttaaaaaccatacgaaaatcacttaaagaattgtatctaagttttgtcct 16995726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 27434670 - 27434609
Alignment:
Q  16 atgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    |||||||||||||||||||| |||| ||||||||||||  ||||||| ||||||||||||||    
T  27434670 atgtatttttagttaagaactatacaaaaagcacataagaaattgtacctaagttttctcct 27434609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 37525059 - 37525112
Alignment:
Q  21 tttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttct 74  Q
    ||||||||||||||||| ||||||||||| |||||||||||| |||||||||||    
T  37525059 tttttagttaagaaccacacgaaaagcacctaaagaattgtacctaagttttct 37525112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 13204495 - 13204551
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    ||||||||| |||||||||||||| |||||| |||||||| ||||||||||||||||    
T  13204495 tttagttaaaaaccatacgaaaagtacataaggaattgtacctaagttttctccttt 13204551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 42274545 - 42274489
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    ||||||||||||||||||||||||||  ||| |||||||| ||||||||||||||||    
T  42274545 tttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctccttt 42274489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 42274607 - 42274663
Alignment:
Q  19 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctc 75  Q
    ||||||||||||||||||||||||||| ||| ||| |||||||| ||||||||||||    
T  42274607 tatttttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttctc 42274663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 530722 - 530667
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    |||||||||||||||||| |||||||| ||| |||||||| |||||||||||||||    
T  530722 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctcctt 530667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 21048758 - 21048703
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    ||||||||||||||||||||||||||  ||| |||||||| |||||||||||||||    
T  21048758 tttagttaagaaccatacgaaaagcatctaacgaattgtacctaagttttctcctt 21048703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 1299030 - 1299084
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    ||||||||||||||||| ||||||||| ||| |||||||| ||||||||||||||    
T  1299030 tttagttaagaaccataagaaaagcacctaaggaattgtacctaagttttctcct 1299084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 3422543 - 3422601
Alignment:
Q  19 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    ||||||||||||| ||||||||||||| ||| |||||||||||| ||||||||| ||||    
T  3422543 tatttttagttaaaaaccatacgaaaaacacctaaagaattgtacctaagttttgtcct 3422601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 4552903 - 4552960
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttta 80  Q
    ||||||||||||||||||  |||||| |||| |||||||| |||||||||||||||||    
T  4552903 tttagttaagaaccatacagaaagcatataaggaattgtacctaagttttctccttta 4552960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 20435193 - 20435140
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    ||||||||||||||||||||||||||  ||| ||||||||| ||||||||||||    
T  20435193 tttagttaagaaccatacgaaaagcatctaaggaattgtatataagttttctcc 20435140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 27434728 - 27434781
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    ||||||||||||||||||||||||||| ||| ||||||||  ||||||||||||    
T  27434728 tttagttaagaaccatacgaaaagcacctaaggaattgtacttaagttttctcc 27434781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 4688300 - 4688248
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctc 75  Q
    ||||||||||||||||||||||||||| |||  ||||||| ||||||||||||    
T  4688300 tttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttctc 4688248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 4688358 - 4688418
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctc 75  Q
    |||||||||||| |||||||||||||||||| ||  ||| |||||||| ||||||||||||    
T  4688358 tatgtatttttaattaagaaccatacgaaaatcatctaaggaattgtacctaagttttctc 4688418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 35360737 - 35360674
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    |||||||||||||||||||||||||||||||  || |||  ||||||| ||||||||||||||||    
T  35360737 tatgtatttttagttaagaaccatacgaaaaatacctaataaattgta-ctaagttttctccttt 35360674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 43486253 - 43486197
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    ||||||||||||||||| |||||| || ||| |||||||| ||||||||||||||||    
T  43486253 tttagttaagaaccataggaaaagtacctaaggaattgtacctaagttttctccttt 43486197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 55107642 - 55107698
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    |||||| ||||||||||| |||||||| ||| |||||||| ||||||||||||||||    
T  55107642 tttagtaaagaaccatacaaaaagcacctaaggaattgtacctaagttttctccttt 55107698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 24915909 - 24915971
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    |||||||||||||||||||||||| | ||||| ||||||  ||||||| |||||||||||||||    
T  24915909 tatgtatttttagttaagaaccat-caaaaagtacataagaaattgtacctaagttttctcctt 24915971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 47465098 - 47465157
Alignment:
Q  19 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    ||||||||||||| || |||| ||||||||| |||||||||||| ||||||||| |||||    
T  47465098 tatttttagttaaaaatcatatgaaaagcacctaaagaattgtacctaagttttgtcctt 47465157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 18417775 - 18417829
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    |||| ||||||||||||| |||||||| ||| |||||||| ||||||||||||||    
T  18417775 tttaattaagaaccatacaaaaagcacctaaggaattgtacctaagttttctcct 18417829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 28809957 - 28810019
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    ||||||||| |||||||||||||||| |||||||  |||  ||||||| ||||||||||||||    
T  28809957 tatgtatttctagttaagaaccataccaaaagcagctaagaaattgtacctaagttttctcct 28810019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 32318834 - 32318896
Alignment:
Q  19 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctttag 81  Q
    |||||||| ||||||| |||| ||||||||| ||||||||||||  ||| |||||||||||||    
T  32318834 tatttttaattaagaatcatatgaaaagcacctaaagaattgtacttaaattttctcctttag 32318896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 11330164 - 11330103
Alignment:
Q  18 gtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    ||||||| ||||||||| |||| ||||||||  |||  ||||||||||||||||||||||||    
T  11330164 gtattttcagttaagaatcatatgaaaagcatctaagaaattgtatctaagttttctccttt 11330103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 23928620 - 23928564
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttta 80  Q
    |||||||||||| |||||||||| ||| ||| |||||||| |||||||||||||||||    
T  23928620 tttagttaagaatcatacgaaaaacac-taaggaattgtacctaagttttctccttta 23928564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 23928681 - 23928738
Alignment:
Q  19 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    |||||||||||||||| |||||| ||||||| ||| ||||||||  ||||||||||||    
T  23928681 tatttttagttaagaatcatacgcaaagcacctaaggaattgtacataagttttctcc 23928738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 55049453 - 55049400
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    ||||||||||||| ||||||||||||| ||| ||||||||  ||||||||||||    
T  55049453 tttagttaagaactatacgaaaagcacctaaggaattgtacataagttttctcc 55049400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 4895033 - 4894967
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagca---cataaagaattgtatctaagttttctcctt 78  Q
    ||||||||||||||||||||| |||| |||| ||   ||||| |||||||| |||||||||||||||    
T  4895033 tatgtatttttagttaagaactatacaaaaaacagtacataaggaattgtacctaagttttctcctt 4894967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 36030992 - 36030936
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    |||||||||||| |||||||||||||| ||| |||||||| |||| |||||| ||||    
T  36030992 tttagttaagaaacatacgaaaagcacgtaaggaattgtacctaacttttcttcttt 36030936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 62
Target Start/End: Original strand, 2272484 - 2272523
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgta 62  Q
    ||||| ||||||||||||||||||||||||| ||||||||    
T  2272484 tttagctaagaaccatacgaaaagcacataatgaattgta 2272523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 46
Target Start/End: Original strand, 21048814 - 21048845
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaag 46  Q
    ||||||||||||||||||||||||||||||||    
T  21048814 tatgtatttttagttaagaaccatacgaaaag 21048845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 28574006 - 28573947
Alignment:
Q  17 tgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    |||||||| || |||||||||| |||||||||| |||  ||||||| |||||||||||||    
T  28574006 tgtattttaaggtaagaaccatgcgaaaagcacctaagtaattgtacctaagttttctcc 28573947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 2272421 - 2272371
Alignment:
Q  22 ttttagttaagaaccatacgaaaagcacataaagaattgtatctaagtttt 72  Q
    ||||||||||||||||||  |||||||| |||| ||||||| |||||||||    
T  2272421 ttttagttaagaaccatataaaaagcacctaaaaaattgtaactaagtttt 2272371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 3422482 - 3422428
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    |||| |||||||| ||||||||||||| |||  ||||||| ||||||||||||||    
T  3422482 tttaattaagaactatacgaaaagcacctaagaaattgtacctaagttttctcct 3422428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 35360794 - 35360847
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    ||||||||||||||||||||||| ||  |||| ||||||| ||||||||||||||    
T  35360794 tttagttaagaaccatacgaaaaacaactaaaaaattgta-ctaagttttctcct 35360847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 42020203 - 42020257
Alignment:
Q  18 gtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagtttt 72  Q
    ||||||||||||||||||||||| ||||| |  || ||||||||| |||||||||    
T  42020203 gtatttttagttaagaaccatacaaaaagtatctagagaattgtacctaagtttt 42020257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 56552120 - 56552064
Alignment:
Q  17 tgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttc 73  Q
    ||||||||||||| |||||||||| |||||||| ||| ||| |||| || |||||||    
T  56552120 tgtatttttagttgagaaccatacaaaaagcacctaaggaaatgtacctgagttttc 56552064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 4e-22; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 15 - 80
Target Start/End: Original strand, 38528522 - 38528587
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttta 80  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||    
T  38528522 tatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctccttta 38528587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 31231726 - 31231790
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||    
T  31231726 tatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctccttt 31231790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 10936580 - 10936642
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||    
T  10936580 tatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcct 10936642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 80
Target Start/End: Complemental strand, 24836081 - 24836016
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttta 80  Q
    ||||||||||||||| ||||||||||||||||||| |||  ||||||| |||||||||||||||||    
T  24836081 tatgtatttttagttnagaaccatacgaaaagcacctaagcaattgtacctaagttttctccttta 24836016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 38883282 - 38883220
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    ||||||||||||||||||||||||||||||||||  ||| |||||||| ||||||||||||||    
T  38883282 tatgtatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctcct 38883220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 80
Target Start/End: Original strand, 20184349 - 20184414
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttta 80  Q
    |||||||||||||||||||| |||||||||||||  ||| |||||||| |||||||||||||||||    
T  20184349 tatgtatttttagttaagaatcatacgaaaagcagctaaggaattgtacctaagttttctccttta 20184414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 34052340 - 34052279
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    ||||||||||||||||||||||||||||||||||| ||| ||| |||| |||||||||||||    
T  34052340 tatgtatttttagttaagaaccatacgaaaagcacctaaggaaatgtacctaagttttctcc 34052279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 35339331 - 35339274
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttta 80  Q
    ||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||    
T  35339331 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctccttta 35339274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 9285824 - 9285888
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    |||||||||||| ||||||||||||||||||| || |||||||||||| |||| |||||||||||    
T  9285824 tatgtatttttatttaagaaccatacgaaaagtacctaaagaattgtacctaaattttctccttt 9285888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 9289891 - 9289955
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    |||||||||||| ||||||||||||||||||| || |||||||||||| |||| |||||||||||    
T  9289891 tatgtatttttatttaagaaccatacgaaaagtacctaaagaattgtacctaaattttctccttt 9289955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 30594754 - 30594690
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    ||||||||||||||||||||| || |||||||||| ||| |||||||| ||||||||||||||||    
T  30594754 tatgtatttttagttaagaactatgcgaaaagcacctaaggaattgtacctaagttttctccttt 30594690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 35665726 - 35665786
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctc 75  Q
    ||||||||||||||||| ||||||||||||||||| ||| |||||||| ||||||||||||    
T  35665726 tatgtatttttagttaaaaaccatacgaaaagcacctaaggaattgtacctaagttttctc 35665786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 29277897 - 29277838
Alignment:
Q  17 tgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    |||||||||||||||||||||||| ||||| || |||||||||||| |||||||||||||    
T  29277897 tgtatttttagttaagaaccatacaaaaagtacctaaagaattgtacctaagttttctcc 29277838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 30259176 - 30259239
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    |||||||||||||||||||||||||| ||||||||  || |||||||| |||||||||||||||    
T  30259176 tatgtatttttagttaagaaccatacaaaaagcacccaaggaattgtacctaagttttctcctt 30259239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 35339388 - 35339447
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttct 74  Q
    |||||||||||| ||||||||||||||||||| |||||| |||||||| |||||||||||    
T  35339388 tatgtatttttatttaagaaccatacgaaaagtacataaggaattgtacctaagttttct 35339447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 35665691 - 35665632
Alignment:
Q  18 gtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    |||||||||||||||||||||||||||||||| |||  ||||||| ||||||||||||||    
T  35665691 gtatttttagttaagaaccatacgaaaagcacctaagcaattgtacctaagttttctcct 35665632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 33721879 - 33721825
Alignment:
Q  24 ttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    |||||||||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  33721879 ttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcctt 33721825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 47237539 - 47237601
Alignment:
Q  16 atgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    |||||||||||||||||||||||||||||||||| | |  ||||||| |||||||||||||||    
T  47237539 atgtatttttagttaagaaccatacgaaaagcaccttagaaattgtacctaagttttctcctt 47237601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 3953152 - 3953213
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    |||||||||||||||||||||||||| ||||| || |||  |||||||||||||||||||||    
T  3953152 tatgtatttttagttaagaaccatacaaaaagtacctaagtaattgtatctaagttttctcc 3953213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 24836138 - 24836191
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    ||||||||||||||||||||||||||| ||| |||||||| |||||||||||||    
T  24836138 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 24836191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 38883335 - 38883392
Alignment:
Q  19 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    ||||||||||||||||||||||||||||||  ||| |||||||| |||||||||||||    
T  38883335 tatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctcc 38883392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 39617956 - 39618012
Alignment:
Q  19 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    ||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||    
T  39617956 tatttttagttaagaactatacgaaaagcacctaaagaattgta-ctaagttttctcc 39618012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 3953095 - 3953039
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    ||||||||| |||||||||||||| |||||| |||||||| ||||||||||||||||    
T  3953095 tttagttaaaaaccatacgaaaagtacataaggaattgtacctaagttttctccttt 3953039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 48103429 - 48103365
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    |||||||||||||||||||| |||||||||| ||| |||  ||||||| ||||||||||||||||    
T  48103429 tatgtatttttagttaagaatcatacgaaaaacacctaagaaattgtacctaagttttctccttt 48103365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 34052397 - 34052452
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    ||||| ||||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  34052397 tttagctaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcctt 34052452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 12142249 - 12142192
Alignment:
Q  19 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    ||||||||||||||||||||||  ||||||| ||| |||||||| |||||||||||||    
T  12142249 tatttttagttaagaaccatacccaaagcacgtaaggaattgtacctaagttttctcc 12142192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 20184291 - 20184238
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    |||||||||||| |||||||||||||| ||| |||||||| |||||||||||||    
T  20184291 tttagttaagaatcatacgaaaagcacctaaggaattgtacctaagttttctcc 20184238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 31231667 - 31231614
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    |||||||||||||||||| |||||||| ||| |||||||| |||||||||||||    
T  31231667 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctcc 31231614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 48103483 - 48103536
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    |||||||||||||||||| |||||||| ||||||||||||  ||||||||||||    
T  48103483 tttagttaagaaccatacaaaaagcacctaaagaattgtagataagttttctcc 48103536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 76
Target Start/End: Original strand, 39143826 - 39143877
Alignment:
Q  25 tagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    ||||||||||||||||||||| ||| ||| |||||||| |||||||||||||    
T  39143826 tagttaagaaccatacgaaaaacacctaatgaattgtacctaagttttctcc 39143877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 17101699 - 17101649
Alignment:
Q  31 agaaccatacgaaaagcacataaagaattgtatctaagttttctcctttag 81  Q
    ||||||||||||||||||| |||  ||||||| ||||||||||||||||||    
T  17101699 agaaccatacgaaaagcacctaagaaattgtacctaagttttctcctttag 17101649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 24123813 - 24123755
Alignment:
Q  18 gtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    ||||||||||||| ||||||||| ||||| |||||| |||||||| |||| ||||||||    
T  24123813 gtatttttagttaggaaccatacaaaaagtacataaggaattgtacctaaattttctcc 24123755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 25742541 - 25742603
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    ||||||||||||||||| ||||||||||||||||| |||  ||||| |  |||||||||||||    
T  25742541 tatgtatttttagttaacaaccatacgaaaagcacttaagaaattgcacttaagttttctcct 25742603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 30259119 - 30259065
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    ||||||||||||||||| ||||||||| ||| |||||||| ||||||||| ||||    
T  30259119 tttagttaagaaccataggaaaagcacctaaggaattgtacctaagttttatcct 30259065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 7955041 - 7955004
Alignment:
Q  16 atgtatttttagttaagaaccatacgaaaagcacataa 53  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  7955041 atgtatttttagttaagaaccatacaaaaagcacataa 7955004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 10936523 - 10936470
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    |||||||||||||| |||||||||||| ||| ||||||||  ||||||||||||    
T  10936523 tttagttaagaaccgtacgaaaagcacctaaggaattgtacataagttttctcc 10936470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 38528451 - 38528394
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagtttt 72  Q
    |||||||||||||||||||||||||| |||||||  ||| |||||||| |||| ||||    
T  38528451 tatgtatttttagttaagaaccatacaaaaagcatttaaggaattgtacctaactttt 38528394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 45997561 - 45997508
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    |||||||||||||||||| |||||||||||   ||||||| |||||||||||||    
T  45997561 tttagttaagaaccatacaaaaagcacatatgaaattgtacctaagttttctcc 45997508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 30594811 - 30594866
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    ||||||||||||||||||||||||||  ||| |||||||| ||||| |||| ||||    
T  30594811 tttagttaagaaccatacgaaaagcatctaaggaattgtacctaagctttcccctt 30594866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 45997618 - 45997685
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctttaga 82  Q
    ||||||||||||||||||||||||||  ||| ||| ||| |||||| | ||| |||||||||| ||||    
T  45997618 tatgtatttttagttaagaaccatacctaaaacacctaaggaattgcacctaggttttctcctctaga 45997685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 12142311 - 12142365
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    ||||||||||||| ||||||||| ||||||| |||||||| | || |||||||||    
T  12142311 tttagttaagaactatacgaaaaacacataaggaattgtacccaaattttctcct 12142365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 9285767 - 9285714
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    |||| ||||||||||||| ||||||||  || |||||||| |||||||||||||    
T  9285767 tttaattaagaaccatacaaaaagcaccaaatgaattgtacctaagttttctcc 9285714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 9289834 - 9289781
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    |||| ||||||||||||| ||||||||  || |||||||| |||||||||||||    
T  9289834 tttaattaagaaccatacaaaaagcaccaaatgaattgtacctaagttttctcc 9289781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 76
Target Start/End: Original strand, 17101700 - 17101745
Alignment:
Q  31 agaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    ||||||||||||||||||| |||  ||||||| |||||||||||||    
T  17101700 agaaccatacgaaaagcacctaagaaattgtacctaagttttctcc 17101745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 37093886 - 37093942
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    ||||||||| |||||||||||||| || |||  |||||||||||| |||||| ||||    
T  37093886 tttagttaaaaaccatacgaaaagtacctaagaaattgtatctaaattttctacttt 37093942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 39143765 - 39143713
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctc 75  Q
    |||||| |||||||||||||||||||   || |||||||| ||||||||||||    
T  39143765 tttagtcaagaaccatacgaaaagcatccaatgaattgtacctaagttttctc 39143713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 40596797 - 40596837
Alignment:
Q  17 tgtatttttagttaagaaccatacgaaaagcacataaagaa 57  Q
    |||||||||||||||||||||||| |||| ||| |||||||    
T  40596797 tgtatttttagttaagaaccatacaaaaaacacctaaagaa 40596837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 4e-22; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 35368607 - 35368546
Alignment:
Q  18 gtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  35368607 gtatttttagttaagaaccatacgaaaagcacataaggaattgtacctaagttttctccttt 35368546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 45487860 - 45487797
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  45487860 tatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcctt 45487797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 21969267 - 21969329
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||    
T  21969267 tatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcct 21969329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 21991703 - 21991765
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||    
T  21991703 tatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcct 21991765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 36822870 - 36822931
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||    
T  36822870 tatgtatttttagttaagaaccatacgaaaagcacctaaaaaattgtacctaagttttctcc 36822931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 12789667 - 12789603
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    ||||||||||||||||||||||||||||||| ||| ||| |||||||| ||||||||||||||||    
T  12789667 tatgtatttttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttctccttt 12789603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 4072384 - 4072447
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    ||||||||||||||||||||||||||||||| ||| ||| |||||||| |||||||||||||||    
T  4072384 tatgtatttttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttctcctt 4072447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 36657543 - 36657606
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    ||||||||||||||||||||||||||||||||||  ||| |||||||| |||||||||||||||    
T  36657543 tatgtatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctcctt 36657606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 5529952 - 5529886
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctttag 81  Q
    ||||||||||||||||||||||||||||||||||| |||  ||||||| |||||||||||| |||||    
T  5529952 tatgtatttttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttctcgtttag 5529886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 25488451 - 25488513
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    |||||||||||||||||||||||||| |||||||| ||| |||||||| ||||||||||||||    
T  25488451 tatgtatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctcct 25488513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 25561072 - 25561010
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    |||||||||||||||||||||||||| |||||||| ||| |||||||| ||||||||||||||    
T  25561072 tatgtatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctcct 25561010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 32237504 - 32237566
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    |||||||||||| |||||||||||||||||||||| ||| |||||||| ||||||||||||||    
T  32237504 tatgtatttttaattaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcct 32237566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 36329290 - 36329352
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||  |||||||||    
T  36329290 tatgtatttttagttaagaaccatacgaaaagcacctaaagaattgtagctaccttttctcct 36329352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 38125289 - 38125351
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    ||||||||||||||||||||||||||||||| ||| ||| |||||||| ||||||||||||||    
T  38125289 tatgtatttttagttaagaaccatacgaaaaacacctaatgaattgtacctaagttttctcct 38125351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 32362922 - 32362861
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||  ||||||||||||    
T  32362922 tatgtatttttagttaagaaccatacgaaaaacacctaaagaattgtagttaagttttctcc 32362861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 39850402 - 39850337
Alignment:
Q  18 gtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctttagat 83  Q
    |||||||||||||||||||||||||||| ||| ||| |||| ||| ||||||||||||||||||||    
T  39850402 gtatttttagttaagaaccatacgaaaaacacctaaggaatagtacctaagttttctcctttagat 39850337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 10017175 - 10017115
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctc 75  Q
    ||||||||||||||||||||||||| ||||||||| ||| |||||||| ||||||||||||    
T  10017175 tatgtatttttagttaagaaccatatgaaaagcacctaaggaattgtacctaagttttctc 10017115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 10254629 - 10254569
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctc 75  Q
    ||||||||||||||||||||||||| ||||||||| ||| |||||||| ||||||||||||    
T  10254629 tatgtatttttagttaagaaccatatgaaaagcacctaaggaattgtacctaagttttctc 10254569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 10441368 - 10441432
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    |||||||||||||||||||||| ||| |||||||| ||| |||||||| ||||||||||||||||    
T  10441368 tatgtatttttagttaagaaccgtaccaaaagcacctaaggaattgtacctaagttttctccttt 10441432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 21969210 - 21969154
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    ||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||    
T  21969210 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctccttt 21969154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 21991646 - 21991590
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    ||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||    
T  21991646 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctccttt 21991590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 3970601 - 3970664
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    |||||||||||||||||||||||||||||||| || |||  ||||||| |||||||||||||||    
T  3970601 tatgtatttttagttaagaaccatacgaaaagtacctaagaaattgtacctaagttttctcctt 3970664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 36822818 - 36822759
Alignment:
Q  18 gtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    |||||||||||||||||||||||||||||||  ||| |||||||| ||||||||||||||    
T  36822818 gtatttttagttaagaaccatacgaaaagcagctaaggaattgtacctaagttttctcct 36822759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 50099552 - 50099607
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    ||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  50099552 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcctt 50099607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 1476663 - 1476725
Alignment:
Q  17 tgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    ||||||||||||||||||||||| ||||||||| ||| |||||||| ||||||||| ||||||    
T  1476663 tgtatttttagttaagaaccatatgaaaagcacctaaggaattgtacctaagttttatccttt 1476725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 25446310 - 25446250
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||    
T  25446310 tatgtatttttagttaagaaccatacgaaaagcac-taaggaattgta-ctaagttttctcct 25446250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 26906511 - 26906453
Alignment:
Q  19 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    |||||||||||||||||||||||||||| || ||| |||||||| ||||||||||||||    
T  26906511 tatttttagttaagaaccatacgaaaaggacctaaggaattgtacctaagttttctcct 26906453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 36657490 - 36657432
Alignment:
Q  19 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    ||||||||||||||||||||||||||||||  ||| |||||||| ||||||||||||||    
T  36657490 tatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctcct 36657432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 39850459 - 39850517
Alignment:
Q  19 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    |||||||||||||||| |||||||||||||| ||| |||||||| ||||||||||||||    
T  39850459 tatttttagttaagaatcatacgaaaagcacctaaggaattgtacctaagttttctcct 39850517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 45487917 - 45487971
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    ||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||    
T  45487917 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcct 45487971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 45713013 - 45713071
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttc 73  Q
    ||||||||||||||| ||||||||||||||||||| ||| |||||||| ||||||||||    
T  45713013 tatgtatttttagtttagaaccatacgaaaagcacctaaggaattgtacctaagttttc 45713071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 8831801 - 8831744
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagtttt 72  Q
    ||||||||||||||| ||||||||||||||||||| ||| |||||||| |||||||||    
T  8831801 tatgtatttttagtttagaaccatacgaaaagcacctaaggaattgtacctaagtttt 8831744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 15 - 80
Target Start/End: Complemental strand, 12838138 - 12838073
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttta 80  Q
    |||||||||||||||||||||||||| |||||||| ||| ||||||||  |||||||||| |||||    
T  12838138 tatgtatttttagttaagaaccatacaaaaagcacctaaggaattgtacataagttttcttcttta 12838073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 22101283 - 22101336
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    ||||||||||||||||||||||||| ||||| |||||||| |||||||||||||    
T  22101283 tttagttaagaaccatacgaaaagctcataaggaattgtacctaagttttctcc 22101336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 22176227 - 22176280
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    |||||||||||||||||| |||||||||||| |||||||| |||||||||||||    
T  22176227 tttagttaagaaccatacaaaaagcacataaggaattgtacctaagttttctcc 22176280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 36278870 - 36278927
Alignment:
Q  19 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    |||||||||||||||||||||||||||| || ||| |||||||| |||||||||||||    
T  36278870 tatttttagttaagaaccatacgaaaaggacctaaggaattgtacctaagttttctcc 36278927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 55340404 - 55340465
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    ||||||||||||||||||||||||| |||||  || ||| ||||||||||||||||||||||    
T  55340404 tatgtatttttagttaagaaccatatgaaaaatacctaaggaattgtatctaagttttctcc 55340465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 75
Target Start/End: Original strand, 8831859 - 8831911
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctc 75  Q
    ||||||||||||||||||||||||||| |||| ||||||| ||||||||||||    
T  8831859 tttagttaagaaccatacgaaaagcacctaaaaaattgtacctaagttttctc 8831911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 10117576 - 10117516
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctc 75  Q
    ||||||||||||||||||||||||| ||||||||| ||| ||| |||| ||||||||||||    
T  10117576 tatgtatttttagttaagaaccatatgaaaagcacctaaggaactgtacctaagttttctc 10117516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 10117629 - 10117685
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    ||||||||||||||||||||||||||| ||| |||||||| |||| |||||||||||    
T  10117629 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaaattttctccttt 10117685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 25446368 - 25446422
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    ||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  25446368 tttagttaagaaccatacgaaaagcacctaaggaattgta-ctaagttttctcctt 25446422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 43639196 - 43639251
Alignment:
Q  19 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttct 74  Q
    |||||||||||||||| |||||||||||||| ||| |||||||| |||||||||||    
T  43639196 tatttttagttaagaatcatacgaaaagcacctaaggaattgtacctaagttttct 43639251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 3970544 - 3970490
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    ||||||||||||||||||||||||||| ||| |||||| | ||||||||||||||    
T  3970544 tttagttaagaaccatacgaaaagcacctaaggaattgcacctaagttttctcct 3970490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 4072326 - 4072272
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    ||||||||||||||||||||||||||| |||  ||||||| ||||||||||||||    
T  4072326 tttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttctcct 4072272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 80
Target Start/End: Original strand, 157079 - 157144
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttta 80  Q
    ||||||||||||| ||||||| |||| |||||||| |||  |||||||| ||||||||||||||||    
T  157079 tatgtatttttagctaagaactataccaaaagcacctaagaaattgtatataagttttctccttta 157144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 13078216 - 13078163
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    ||||||||||||||||||||||||||| ||| |||||| | |||||||||||||    
T  13078216 tttagttaagaaccatacgaaaagcacctaaggaattgcacctaagttttctcc 13078163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 13078273 - 13078334
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    |||||||||||||||||||| ||||||||||| || |||  ||||||| |||||||||||||    
T  13078273 tatgtatttttagttaagaatcatacgaaaagtacctaagaaattgtacctaagttttctcc 13078334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 26976956 - 26977009
Alignment:
Q  19 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagtttt 72  Q
    ||||||||||||| ||||||||||||| ||| |||||||||||| |||||||||    
T  26976956 tatttttagttaaaaaccatacgaaaaacacctaaagaattgtacctaagtttt 26977009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 37506237 - 37506298
Alignment:
Q  16 atgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    |||||||||||||||||||||| ||||||| ||| ||||||||||||  |||||||| ||||    
T  37506237 atgtatttttagttaagaaccacacgaaaaacacctaaagaattgtacataagttttgtcct 37506298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 43150541 - 43150480
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    ||||||||||||||||| ||||||||||||||||| | | |||||| | |||||||||||||    
T  43150541 tatgtatttttagttaaaaaccatacgaaaagcacctgaggaattgcacctaagttttctcc 43150480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 75
Target Start/End: Original strand, 10254687 - 10254739
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctc 75  Q
    ||||||||||||||||||||||||||| ||| |||||||| |||| |||||||    
T  10254687 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaaattttctc 10254739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 10441315 - 10441255
Alignment:
Q  19 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    |||||||||||||||| ||||| |||||||| ||| ||||||||  |||||||||||||||    
T  10441315 tatttttagttaagaatcataccaaaagcacctaaggaattgtacttaagttttctccttt 10441255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 32237447 - 32237396
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttct 74  Q
    ||||||||||||||||||||||| ||| ||| |||||||| |||||||||||    
T  32237447 tttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttct 32237396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 26906572 - 26906626
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    |||||||||||||||||||||||| |  ||| |||||||| ||||||||||||||    
T  26906572 tttagttaagaaccatacgaaaagtatctaaggaattgtacctaagttttctcct 26906626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 35368851 - 35368905
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    ||||||||| ||||||||||||| |||||||  ||||||| ||||||||||||||    
T  35368851 tttagttaaaaaccatacgaaaaacacataagaaattgtacctaagttttctcct 35368905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 36278809 - 36278755
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    |||||||||||||||||||||||| |  ||| |||||||| ||||||||||||||    
T  36278809 tttagttaagaaccatacgaaaagtatctaaggaattgtacctaagttttctcct 36278755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 12838195 - 12838251
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    ||||||||| ||||||||||||| ||| ||||||||||||  |||||||||| ||||    
T  12838195 tttagttaaaaaccatacgaaaaacacctaaagaattgtacataagttttcttcttt 12838251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 47
Target Start/End: Complemental strand, 22101225 - 22101193
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagc 47  Q
    |||||||||||||||||||||||||||||||||    
T  22101225 tatgtatttttagttaagaaccatacgaaaagc 22101193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 47
Target Start/End: Complemental strand, 22176169 - 22176137
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagc 47  Q
    |||||||||||||||||||||||||||||||||    
T  22176169 tatgtatttttagttaagaaccatacgaaaagc 22176137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 25561129 - 25561185
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    ||||||||||||| ||||||||||||| ||| ||||||||  |||| ||||||||||    
T  25561129 tttagttaagaactatacgaaaagcacctaaggaattgtacttaagatttctccttt 25561185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 26976895 - 26976839
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    |||| |||||||| ||||||||||||| |||  ||||||| ||||||||||||||||    
T  26976895 tttaattaagaactatacgaaaagcacctaagaaattgtacctaagttttctccttt 26976839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 46664237 - 46664173
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    ||||||||||||||||||||| |||||||||  || |||  ||||||| |||| |||||||||||    
T  46664237 tatgtatttttagttaagaactatacgaaaaatacctaagaaattgtacctaaattttctccttt 46664173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 404163 - 404213
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttct 74  Q
    ||||||||||||||||||| ||||||  |||||||||||| |||||||||||    
T  404163 tttagttaagaaccatacggaaagcatctaaagaattgta-ctaagttttct 404213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 75
Target Start/End: Original strand, 10017232 - 10017279
Alignment:
Q  28 ttaagaaccatacgaaaagcacataaagaattgtatctaagttttctc 75  Q
    |||||||||||||||||||||| ||| |||||||| |||| |||||||    
T  10017232 ttaagaaccatacgaaaagcacctaaggaattgtacctaaattttctc 10017279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 43639130 - 43639079
Alignment:
Q  27 gttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    |||||||| |||||||||||||| ||| ||||| || |||||||||||||||    
T  43639130 gttaagaatcatacgaaaagcacctaaggaattataactaagttttctcctt 43639079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 50099493 - 50099446
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 62  Q
    |||||||||||| |||| ||||||||||||||||| ||| ||||||||    
T  50099493 tatgtatttttaattaaaaaccatacgaaaagcacctaacgaattgta 50099446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 404101 - 404043
Alignment:
Q  19 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    ||||||||||||| || |||||||||||||| |||  |||||||  |||||||||||||    
T  404101 tatttttagttaaaaatcatacgaaaagcacctaagaaattgtacgtaagttttctcct 404043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 5530005 - 5530059
Alignment:
Q  18 gtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagtttt 72  Q
    |||||||||||||| ||||||||||||||||| |||  ||||||| |||| ||||    
T  5530005 gtatttttagttaataaccatacgaaaagcacttaagaaattgtacctaaatttt 5530059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 297590 - 297541
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagtttt 72  Q
    ||||| |||||||||||||||||||||  || |||||||| |||||||||    
T  297590 tttagctaagaaccatacgaaaagcaccaaaggaattgtacctaagtttt 297541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 25488394 - 25488341
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    ||||||||||||| ||||||||||||| ||| ||||||||  |||| |||||||    
T  25488394 tttagttaagaactatacgaaaagcacctaaggaattgtacttaagatttctcc 25488341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 13724098 - 13724162
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    ||||||||||||||||| ||  ||||||||| ||  ||| |||||||| ||||| ||||||||||    
T  13724098 tatgtatttttagttaaaaattatacgaaaaacatctaaggaattgtacctaagatttctccttt 13724162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 1e-21; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 21380051 - 21380115
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||    
T  21380051 tatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctccttt 21380115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 8091123 - 8091063
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctc 75  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||    
T  8091123 tatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtatctaaattttctc 8091063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 885446 - 885384
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    |||||||||||||||||||||||||| |||||||| ||| |||||||| ||||||||||||||    
T  885446 tatgtatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctcct 885384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 4238913 - 4238852
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    |||||||||||| || |||||||||| |||||||||||||||||||||||||| ||||||||    
T  4238913 tatgtatttttaattgagaaccatacaaaaagcacataaagaattgtatctaaattttctcc 4238852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 7808722 - 7808779
Alignment:
Q  18 gtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctc 75  Q
    |||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||    
T  7808722 gtatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctc 7808779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 11687253 - 11687314
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    ||||||||||||||||||||||||||||||||||  ||| |||||||| |||||||||||||    
T  11687253 tatgtatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctcc 11687314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 80
Target Start/End: Complemental strand, 13439756 - 13439691
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttta 80  Q
    ||||||||||||| |||||||||||||||||| || ||| |||||||| |||||||||||||||||    
T  13439756 tatgtatttttagctaagaaccatacgaaaagtacttaaggaattgtacctaagttttctccttta 13439691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 20501767 - 20501706
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    ||||||||||||||||||||||||||||||| ||| ||| |||||||| |||||||||||||    
T  20501767 tatgtatttttagttaagaaccatacgaaaaacacctaaggaattgtaactaagttttctcc 20501706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 29609061 - 29609000
Alignment:
Q  16 atgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||| ||||    
T  29609061 atgtatttttagttaagaaccacacgaaaagcacttaaagaattgtacctaagttttgtcct 29609000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 11687200 - 11687142
Alignment:
Q  19 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    ||||||||||||||||||||||||||||||  ||| |||||||| ||||||||||||||    
T  11687200 tatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctcct 11687142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 21379994 - 21379940
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    ||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||    
T  21379994 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcct 21379940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 3369046 - 3368985
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||   |||||||||||    
T  3369046 tatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtactcaagttttctcc 3368985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 4890597 - 4890654
Alignment:
Q  21 tttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    ||||||||||||||||||||||||||||| ||| |||||||| |||| ||||||||||    
T  4890597 tttttagttaagaaccatacgaaaagcacctaaggaattgtacctaaattttctcctt 4890654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 15546750 - 15546807
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttta 80  Q
    |||| |||||||||||||||||||||| ||| |||||||| |||||||||||||||||    
T  15546750 tttaattaagaaccatacgaaaagcacctaaggaattgtacctaagttttctccttta 15546807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 15546693 - 15546629
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    |||||||||||||||||||||||||| |||| ||  ||| |||||||| ||||||||||||||||    
T  15546693 tatgtatttttagttaagaaccatacaaaaaacaactaaggaattgtacctaagttttctccttt 15546629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 18998227 - 18998291
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    |||||||||||| |||||||||||||||||||||| ||| |||||||| |||| |||||| ||||    
T  18998227 tatgtatttttaattaagaaccatacgaaaagcacctaaggaattgtagctaaattttctacttt 18998291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 8091180 - 8091235
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    ||||||||||||||||||||||||||| |||  ||||||| |||||||||||||||    
T  8091180 tttagttaagaaccatacgaaaagcacctaagcaattgtacctaagttttctcctt 8091235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 6433743 - 6433687
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    ||||||||||||||||||||||||||| |||  |||| || ||||||||||||||||    
T  6433743 tttagttaagaaccatacgaaaagcacctaagaaattatacctaagttttctccttt 6433687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 7808670 - 7808610
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctc 75  Q
    ||||||||||||||||| ||||| ||||||| ||| ||| |||||||| ||||||||||||    
T  7808670 tatgtatttttagttaaaaaccaaacgaaaaacacctaaggaattgtacctaagttttctc 7808610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 4179136 - 4179198
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    |||||| |||||||||||||||||||||||| ||  |||||||||||| ||||||||| |||||    
T  4179136 tatgtagttttagttaagaaccatacgaaaaacatttaaagaattgta-ctaagttttatcctt 4179198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 13172627 - 13172572
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    ||||||||||||||||||||||| ||  || ||||||||| |||||||||||||||    
T  13172627 tttagttaagaaccatacgaaaaacatctagagaattgtacctaagttttctcctt 13172572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 14393622 - 14393575
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgta 62  Q
    |||||||||||||||||||| |||||||||||||| ||| ||||||||    
T  14393622 tatgtatttttagttaagaatcatacgaaaagcacctaaggaattgta 14393575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 76
Target Start/End: Complemental strand, 17367115 - 17367064
Alignment:
Q  25 tagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    |||||||||| ||||||||||| |||||| |||||||| |||||||||||||    
T  17367115 tagttaagaatcatacgaaaagaacataaggaattgtacctaagttttctcc 17367064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 885503 - 885557
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    |||||||||||| |||| ||||||||| ||| |||||||| ||||||||||||||    
T  885503 tttagttaagaatcataggaaaagcacctaaggaattgtacctaagttttctcct 885557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 4890533 - 4890479
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    ||||||||||||||||||||||| ||| |||  ||||||| ||||||||||||||    
T  4890533 tttagttaagaaccatacgaaaaacacctaagaaattgtacctaagttttctcct 4890479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 14393682 - 14393736
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    |||||||||||||||||| |||||||| ||| ||||| || ||||||||||||||    
T  14393682 tttagttaagaaccatacaaaaagcacctaaggaattatacctaagttttctcct 14393736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 20501819 - 20501872
Alignment:
Q  18 gtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagtttt 72  Q
    |||||||||||||||||||||||||||||||| |||  ||||||| |||||||||    
T  20501819 gtatttttagttaagaaccatacgaaaagcacctaagaaattgta-ctaagtttt 20501872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 4076693 - 4076637
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagtttt 72  Q
    |||||| ||||| |||||||||||||||||| ||  |||||||||||| |||||||||    
T  4076693 tatgtagttttaattaagaaccatacgaaaaacatttaaagaattgta-ctaagtttt 4076637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 13172683 - 13172748
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaa-ttgtatctaagttttctccttt 79  Q
    |||||||||||| |||||||||||||||||| ||| ||| ||| |||||  ||||||||| |||||    
T  13172683 tatgtatttttacttaagaaccatacgaaaaacacttaaggaatttgtacttaagttttcaccttt 13172748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 4238972 - 4239020
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttt 71  Q
    |||| ||||||||||||| ||||||||| || |||||||| ||||||||    
T  4238972 tttaattaagaaccatacaaaaagcacagaaggaattgtacctaagttt 4239020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 1e-21; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 49285085 - 49285149
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||    
T  49285085 tatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctccttt 49285149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 5189530 - 5189467
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  5189530 tatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcctt 5189467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 19797091 - 19797153
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||    
T  19797091 tatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcct 19797153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 50627245 - 50627306
Alignment:
Q  19 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttta 80  Q
    |||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||    
T  50627245 tatttttagttaagaaccatacgaaaagcatataaggaattgtacctaagttttctccttta 50627306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 9978162 - 9978222
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctc 75  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||    
T  9978162 tatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctc 9978222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 15324687 - 15324623
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    ||||||||||||||||||||||||||||||||||| |||  ||||||| ||||||||||||||||    
T  15324687 tatgtatttttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttctccttt 15324623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 42561405 - 42561469
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    |||||||||||||||||||||||||| |||||||| ||| |||||||| ||||||||||||||||    
T  42561405 tatgtatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctccttt 42561469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 47940681 - 47940745
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    ||||||||||||||||||||||||||||||| ||| ||| |||||||| ||||||||||||||||    
T  47940681 tatgtatttttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttctccttt 47940745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 3607839 - 3607902
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    ||||||||||||||||||||||||||||||||||| |||  ||||||| |||||||||||||||    
T  3607839 tatgtatttttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttctcctt 3607902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 4299505 - 4299567
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    ||||||||||||||||||||||||||||||| ||| ||| |||||||| ||||||||||||||    
T  4299505 tatgtatttttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttctcct 4299567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 50627192 - 50627130
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    ||||||||||||||||||||||||||||||||||  ||| |||||||| ||||||||||||||    
T  50627192 tatgtatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctcct 50627130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 27926362 - 27926423
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||  ||||||||||||    
T  27926362 tatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacataagttttctcc 27926423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 14387125 - 14387185
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctc 75  Q
    ||||||||||||||||||||||||||||||| ||| ||| |||||||| ||||||||||||    
T  14387125 tatgtatttttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttctc 14387185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 19954964 - 19954909
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    ||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||    
T  19954964 tttagttaagaactatacgaaaagcacataaggaattgtacctaagttttctcctt 19954909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 19955021 - 19955084
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    |||||||||||||||||||||||||| ||||| || ||| |||||||| |||||||||||||||    
T  19955021 tatgtatttttagttaagaaccatacaaaaagtacctaaggaattgtacctaagttttctcctt 19955084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 27241038 - 27241097
Alignment:
Q  19 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||| |||||||||||||||    
T  27241038 tatttttagttaagaaccatacgcaaagcacctaacgaattgtacctaagttttctcctt 27241097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 36880350 - 36880287
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    |||||||||||||||| |||||||||||||| ||| |||| ||||||| |||||||||||||||    
T  36880350 tatgtatttttagttaggaaccatacgaaaaacacttaaaaaattgtacctaagttttctcctt 36880287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 36880624 - 36880683
Alignment:
Q  18 gtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    |||||||||||||||||||||||||||||||  ||| |||||||| ||||||||||||||    
T  36880624 gtatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctcct 36880683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 51789706 - 51789769
Alignment:
Q  16 atgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    |||| ||||||||||||||||||||||||||||  ||| |||||||| ||||||||||||||||    
T  51789706 atgtgtttttagttaagaaccatacgaaaagcatttaaggaattgtacctaagttttctccttt 51789769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 2854646 - 2854704
Alignment:
Q  19 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    |||||||||||||||||||||||||||| || ||| |||||||| ||||||||||||||    
T  2854646 tatttttagttaagaaccatacgaaaaggacctaaggaattgtacctaagttttctcct 2854704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 27240977 - 27240923
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    ||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||    
T  27240977 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcct 27240923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 48954328 - 48954386
Alignment:
Q  19 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    |||||||||||||||||||||||||||| || ||| |||||||| ||||||||||||||    
T  48954328 tatttttagttaagaaccatacgaaaaggacctaaggaattgtacctaagttttctcct 48954386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 23698616 - 23698673
Alignment:
Q  19 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    |||||||||||||||||||||||||||| || ||| |||||||| |||||||||||||    
T  23698616 tatttttagttaagaaccatacgaaaaggacctaaggaattgtacctaagttttctcc 23698673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 27926304 - 27926251
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    ||||||||||||||||||||||||||||||| ||||| || |||||||||||||    
T  27926304 tttagttaagaaccatacgaaaagcacataaggaattatacctaagttttctcc 27926251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 27928351 - 27928302
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagtttt 72  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  27928351 tttagttaagaaccatacaaaaagcacataaggaattgtatctaagtttt 27928302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 27928408 - 27928469
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    ||||||||||||||||||||||||||||||| ||| ||| ||||||||  ||||||||||||    
T  27928408 tatgtatttttagttaagaaccatacgaaaaacacctaaggaattgtacataagttttctcc 27928469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 40647177 - 40647116
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    ||||||||||||||||||||||| ||||||||||  ||| |||||||| |||||||||||||    
T  40647177 tatgtatttttagttaagaaccacacgaaaagcagctaaggaattgtaactaagttttctcc 40647116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 362475 - 362531
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    |||||||||||| |||||||||||||| |||||||||||| |||| |||||||||||    
T  362475 tttagttaagaatcatacgaaaagcacctaaagaattgtacctaaattttctccttt 362531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 2125180 - 2125244
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    ||||||||||||||||||||| ||||||||||||| |||  ||||||| |||| |||||||||||    
T  2125180 tatgtatttttagttaagaactatacgaaaagcacctaagaaattgtacctaaattttctccttt 2125244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 47940623 - 47940567
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    ||||||||||||||||||||||||||| |||  ||||||| ||||||||||||||||    
T  47940623 tttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttctccttt 47940567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 1387839 - 1387778
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||  ||||||||||||||    
T  1387839 tatgtatttttagttaagaaccatacgaaaagcac-taaggaattgta-gtaagttttctcctt 1387778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 22339096 - 22339151
Alignment:
Q  17 tgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagtttt 72  Q
    ||||||||||||||||||||||| ||||||||| |||||||||| | |||||||||    
T  22339096 tgtatttttagttaagaaccatatgaaaagcacctaaagaattgcacctaagtttt 22339151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 50162649 - 50162708
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttct 74  Q
    |||||| ||||||||||||||||||| |||||||| ||| |||||||| |||||||||||    
T  50162649 tatgtaattttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttct 50162708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 51276806 - 51276865
Alignment:
Q  16 atgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctc 75  Q
    |||||||||||| ||||||||||||||||||||| |||  ||||||| ||||||||||||    
T  51276806 atgtatttttagctaagaaccatacgaaaagcacctaagaaattgtacctaagttttctc 51276865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 9895314 - 9895252
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    |||||||||||||||||||||||||||||||| || |||| |||| || |||| |||||||||    
T  9895314 tatgtatttttagttaagaaccatacgaaaagtacctaaaaaattatacctaaattttctcct 9895252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 1387891 - 1387948
Alignment:
Q  18 gtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctc 75  Q
    |||| ||||||||||||||||||||||||||| ||| |||||||| |||| |||||||    
T  1387891 gtatctttagttaagaaccatacgaaaagcacctaaggaattgtacctaaattttctc 1387948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 2125123 - 2125070
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    |||||||||||||||||||||||||||||||  ||||||| |||| ||||||||    
T  2125123 tttagttaagaaccatacgaaaagcacataagaaattgtaactaaattttctcc 2125070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 2854585 - 2854528
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttta 80  Q
    |||||||||||||||||||||||| |  ||| |||||||| |||||||||||||||||    
T  2854585 tttagttaagaaccatacgaaaagtatctaaggaattgtacctaagttttctccttta 2854528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 9978104 - 9978051
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    |||||||||||| |||||||||||||||||| |||||||| |||| ||||||||    
T  9978104 tttagttaagaatcatacgaaaagcacataaggaattgtacctaaattttctcc 9978051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 19797039 - 19796982
Alignment:
Q  18 gtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctc 75  Q
    |||||||||||||| ||||||||||||||||| |||  ||||||| ||||||||||||    
T  19797039 gtatttttagttaaaaaccatacgaaaagcacctaagaaattgtacctaagttttctc 19796982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 23698555 - 23698498
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttta 80  Q
    |||||||||||||||||||||||| |  ||| |||||||| |||||||||||||||||    
T  23698555 tttagttaagaaccatacgaaaagtatctaaggaattgtacctaagttttctccttta 23698498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 25297966 - 25298018
Alignment:
Q  24 ttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    |||||||||||||||||||||| ||| ||| |||||||| |||||||||||||    
T  25297966 ttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttctcc 25298018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 51789650 - 51789594
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    ||||||||| ||||||||||||| ||| ||| |||||||| ||||||||||||||||    
T  51789650 tttagttaaaaaccatacgaaaatcacctaaggaattgtacctaagttttctccttt 51789594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 62
Target Start/End: Original strand, 15324745 - 15324784
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgta 62  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  15324745 tttagttaagaaccatacgaaaagcacataaggaattgta 15324784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 48954267 - 48954212
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    ||||||||||||||||| |||||| || ||| |||||||| |||||||||||||||    
T  48954267 tttagttaagaaccatatgaaaagtacctaaggaattgtacctaagttttctcctt 48954212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 29598455 - 29598509
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    |||||||||||||||||| ||||| || ||| |||||||| ||||||||||||||    
T  29598455 tttagttaagaaccatacaaaaagtacctaacgaattgtacctaagttttctcct 29598509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 40647236 - 40647290
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    ||||||||| || |||||||||||||| ||| |||||||| ||||||||||||||    
T  40647236 tttagttaaaaatcatacgaaaagcacctaaggaattgtacctaagttttctcct 40647290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 42561348 - 42561294
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    ||||||||||||||||||||||||||| ||| ||||||||  |||| ||||||||    
T  42561348 tttagttaagaaccatacgaaaagcacctaaggaattgtacttaagatttctcct 42561294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 21930441 - 21930380
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    ||||||||||||||||||||||||||||||| ||  ||| |||||||| || || |||||||    
T  21930441 tatgtatttttagttaagaaccatacgaaaaacaactaaggaattgtaactgaggtttctcc 21930380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 28447987 - 28448048
Alignment:
Q  19 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttta 80  Q
    |||||||||||| |||| | ||||||| || ||||||||||||| ||||||||| |||||||    
T  28447987 tatttttagttatgaactaaacgaaaaacatataaagaattgtacctaagttttatccttta 28448048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 957707 - 957762
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    |||||||||||| |||||||||| ||| |||  ||||||||||||||||| |||||    
T  957707 tttagttaagaatcatacgaaaaacacctaagaaattgtatctaagttttatcctt 957762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 5189587 - 5189638
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttct 74  Q
    ||||||||||||||||||||||||||  ||| |||||||| |||| ||||||    
T  5189587 tttagttaagaaccatacgaaaagcatctaaggaattgtacctaaattttct 5189638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 14387068 - 14387017
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttct 74  Q
    |||||||||||||||||||||| |||  ||| |||||||| |||||||||||    
T  14387068 tttagttaagaaccatacgaaatgcatctaaggaattgtacctaagttttct 14387017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 21930496 - 21930551
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    ||||||||||||||||||||||| ||| |||  ||||||| |||| ||||||||||    
T  21930496 tttagttaagaaccatacgaaaaacacctaagtaattgtacctaaattttctcctt 21930551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 26208543 - 26208598
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    ||||||| ||||||||||||||||||| ||| ||||| ||  ||||||||||||||    
T  26208543 tttagttcagaaccatacgaaaagcacctaaggaattatacataagttttctcctt 26208598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 49
Target Start/End: Complemental strand, 26208485 - 26208451
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcac 49  Q
    ||||||||||||||| |||||||||||||||||||    
T  26208485 tatgtatttttagttgagaaccatacgaaaagcac 26208451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 27670261 - 27670299
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgt 61  Q
    ||||||||| ||||||||||||||||||||| |||||||    
T  27670261 tttagttaaaaaccatacgaaaagcacataaggaattgt 27670299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 6079445 - 6079384
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    |||||||||||||| ||||||| |||||||| ||  ||| |||||||| || ||||||||||    
T  6079445 tatgtatttttagtgaagaaccgtacgaaaaacatctaaggaattgtacctgagttttctcc 6079384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 28244018 - 28243957
Alignment:
Q  16 atgtatttttagttaagaacca-----tacgaaaagcacataaagaattgtatctaagtttt 72  Q
    ||||||||||||||||||||||     ||| ||||||||||| ||||||||| |||||||||    
T  28244018 atgtatttttagttaagaaccaaaccatacaaaaagcacatagagaattgtacctaagtttt 28243957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 48645124 - 48645168
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattg 60  Q
    |||||||||||||||||||||| |||||||||||| |||| |||||    
T  48645124 tatgtatttttagttaagaacc-tacgaaaagcacctaaaaaattg 48645168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 50856374 - 50856325
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagtttt 72  Q
    ||||| |||||| |||||||||||||| ||||||||| || |||||||||    
T  50856374 tttagctaagaatcatacgaaaagcacctaaagaattttacctaagtttt 50856325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 46691208 - 46691268
Alignment:
Q  20 atttttagttaagaaccatac-gaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    |||||||||||| |||||||| ||||| ||  |||||||||||| ||||||||| ||||||    
T  46691208 atttttagttaaaaaccatacagaaaaacatctaaagaattgtacctaagttttgtccttt 46691268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 6e-21; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 16705794 - 16705731
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  16705794 tatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcctt 16705731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 3116937 - 3116875
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||    
T  3116937 tatgtatttttagttaagaaccatacgaaaagcaccaaaagaattgtacctaagttttctcct 3116875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 34490517 - 34490455
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  34490517 tatgtatttttagttaagaaccatacgaaaaacacctaaagaattgtacctaagttttctcct 34490455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 34490569 - 34490628
Alignment:
Q  18 gtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    |||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||    
T  34490569 gtatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcct 34490628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 1924091 - 1924153
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    ||||||||||||||||||||||||||||||| ||| ||| |||||||| ||||||||||||||    
T  1924091 tatgtatttttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttctcct 1924153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 20892945 - 20892883
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    ||||||||||||||||||||||||||||||||||| |||  ||||||| ||||||||||||||    
T  20892945 tatgtatttttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttctcct 20892883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 23835937 - 23835875
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||  |||||||||||||    
T  23835937 tatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacataagttttctcct 23835875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 24101890 - 24101829
Alignment:
Q  18 gtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    |||| ||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||    
T  24101890 gtatatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctccttt 24101829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 24101942 - 24102003
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||  ||||||||||||    
T  24101942 tatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacttaagttttctcc 24102003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 34455946 - 34455885
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    |||||||||||| |||||||||||||||||||||| ||| |||||||| |||||||||||||    
T  34455946 tatgtatttttaattaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 34455885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 9933679 - 9933743
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    ||||||||||||||||||||||||||||||||||| |||  ||||||| |||| |||||||||||    
T  9933679 tatgtatttttagttaagaaccatacgaaaagcacctaagaaattgtacctaaattttctccttt 9933743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 45408686 - 45408623
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    |||||||||||||||||||||||||| |||| ||| ||| |||||||| |||||||||||||||    
T  45408686 tatgtatttttagttaagaaccatacaaaaaacacctaaggaattgtacctaagttttctcctt 45408623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 9281461 - 9281519
Alignment:
Q  19 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    |||||||||||||||||||||||||||| || ||| |||||||| ||||||||||||||    
T  9281461 tatttttagttaagaaccatacgaaaaggacctaaggaattgtacctaagttttctcct 9281519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 2818784 - 2818837
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    ||||||||||||||||||||||| ||| |||||||||||| |||||||||||||    
T  2818784 tttagttaagaaccatacgaaaaacacctaaagaattgtacctaagttttctcc 2818837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 29229474 - 29229534
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    |||||||||||||||||||||||||||||||| |  |||||||||||| |||||||||||||    
T  29229474 tatgtatttttagttaagaaccatacgaaaagtaactaaagaattgta-ctaagttttctcc 29229534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 29342774 - 29342834
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    |||||||||||||||||||||||||||||||| |  |||||||||||| |||||||||||||    
T  29342774 tatgtatttttagttaagaaccatacgaaaagtaactaaagaattgta-ctaagttttctcc 29342834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 1924033 - 1923977
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    ||||||||||||||||||||||||||| |||  ||||||| ||||||||||||||||    
T  1924033 tttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttctccttt 1923977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 2818727 - 2818671
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttt 71  Q
    |||||||||||||||||||| |||||||||||||| ||| |||||||| ||||||||    
T  2818727 tatgtatttttagttaagaatcatacgaaaagcacctaaggaattgtacctaagttt 2818671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 6605796 - 6605737
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    ||||||||||||||||||||   |||||||||||||||| |||||||| ||||||||||||||    
T  6605796 tatgtatttttagttaagaa---tacgaaaagcacataaggaattgtacctaagttttctcct 6605737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 42713888 - 42713952
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    |||||||||||||||||||| ||| |||||||||| |||  ||||||| ||||||||||||||||    
T  42713888 tatgtatttttagttaagaatcatgcgaaaagcacttaagaaattgtacctaagttttctccttt 42713952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 7737183 - 7737238
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    |||||||||||| |||||||||||||| ||| |||||||| |||||||||||||||    
T  7737183 tttagttaagaatcatacgaaaagcacctaaggaattgtacctaagttttctcctt 7737238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 27920690 - 27920745
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    ||||||||||||||||||||||||||  |||| ||||||| |||||||||||||||    
T  27920690 tttagttaagaaccatacgaaaagcagctaaaaaattgtacctaagttttctcctt 27920745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 6605858 - 6605908
Alignment:
Q  29 taagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    |||||||||||| |||||||| |||||||||||| ||||||||||||||||    
T  6605858 taagaaccatacaaaaagcacctaaagaattgtacctaagttttctccttt 6605908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 85
Target Start/End: Complemental strand, 27920633 - 27920564
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctttagataa 85  Q
    |||||| |||||||||||| ||||||||||||||| |||  ||||||| ||||||||||||||| ||||||    
T  27920633 tatgtagttttagttaagacccatacgaaaagcacctaagaaattgta-ctaagttttctccttaagataa 27920564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 3116994 - 3117051
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttta 80  Q
    ||||||||||||||||||||||||||  ||  |||||||| |||||||||||||||||    
T  3116994 tttagttaagaaccatacgaaaagcagctatggaattgtacctaagttttctccttta 3117051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 12850652 - 12850713
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    ||||||||||||||||||||||||||||||||||  | | |||||| | |||||||||||||    
T  12850652 tatgtatttttagttaagaaccatacgaaaagcatctgaggaattggacctaagttttctcc 12850713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 20892997 - 20893057
Alignment:
Q  17 tgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    |||||||||||||||||| |||||||||||||| ||| ||||| || |||||||||||||||    
T  20892997 tgtatttttagttaagaatcatacgaaaagcacctaaggaattata-ctaagttttctcctt 20893057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 22269783 - 22269722
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    ||||||||||||||||| || |||||||||| ||| ||| |||||||| |||||||||||||    
T  22269783 tatgtatttttagttaaaaatcatacgaaaaacacctaaggaattgtacctaagttttctcc 22269722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 45408743 - 45408796
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    |||| |||||||||||||||||||||| ||| |||||||| |||||||||||||    
T  45408743 tttaattaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 45408796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 7737125 - 7737065
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctc 75  Q
    |||||||||||||||||||| ||||| |||||||| |||  ||||||| ||||||||||||    
T  7737125 tatgtatttttagttaagaatcataccaaaagcacctaagaaattgtacctaagttttctc 7737065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 9933622 - 9933567
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    ||||||||||||||||| ||||||||| ||| |||||||| ||||||||||||||||    
T  9933622 tttagttaagaaccataggaaaagcac-taatgaattgtacctaagttttctccttt 9933567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 22269838 - 22269894
Alignment:
Q  21 tttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    ||||||||||||||||||||||||||||  ||| ||||||||  |||||||||||||    
T  22269838 tttttagttaagaaccatacgaaaagcatctaaggaattgtacgtaagttttctcct 22269894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 42713830 - 42713774
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    ||||||||||||||||||||||| ||| ||| ||||| ||||||| |||||||||||    
T  42713830 tttagttaagaaccatacgaaaaacacctaaggaattatatctaaattttctccttt 42713774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 43858552 - 43858608
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    |||||||||||||||||||||||| || ||| |||||||| |||| |||||||||||    
T  43858552 tttagttaagaaccatacgaaaagtacctaaggaattgtacctaaattttctccttt 43858608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 7116429 - 7116374
Alignment:
Q  17 tgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagtttt 72  Q
    ||||||||||||| |||||||||||||||| |  |||||||||||| |||||||||    
T  7116429 tgtatttttagttgagaaccatacgaaaagtatctaaagaattgtacctaagtttt 7116374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 16705851 - 16705904
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    ||||||||| ||||||||||||||||| ||| |||||||| |||| ||||||||    
T  16705851 tttagttaaaaaccatacgaaaagcacctaaggaattgtacctaaattttctcc 16705904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 17500059 - 17500002
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttta 80  Q
    ||||||||||||||||||||||| |||||||  ||||||||  ||||||| |||||||    
T  17500059 tttagttaagaaccatacgaaaaacacataagaaattgtattcaagttttttccttta 17500002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 75
Target Start/End: Original strand, 10552999 - 10553051
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctc 75  Q
    |||||||||||| |||||||||| ||| ||| |||||||| ||||||||||||    
T  10552999 tttagttaagaatcatacgaaaaacacctaaggaattgtacctaagttttctc 10553051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 52
Target Start/End: Original strand, 22346486 - 22346522
Alignment:
Q  16 atgtatttttagttaagaaccatacgaaaagcacata 52  Q
    |||||||||||||||| ||||||||||||||||||||    
T  22346486 atgtatttttagttaaaaaccatacgaaaagcacata 22346522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 9850867 - 9850923
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctc 75  Q
    ||||||||||||||||||||||||||||||| |||     |||||||| ||||||||||||    
T  9850867 tatgtatttttagttaagaaccatacgaaaaacac----ggaattgtacctaagttttctc 9850923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 37341023 - 37340964
Alignment:
Q  19 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    |||||||||||||||||||||| ||||  || |||| ||||||| ||||||||| |||||    
T  37341023 tatttttagttaagaaccatacaaaaaatacttaaaaaattgtacctaagttttgtcctt 37340964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 39243095 - 39243150
Alignment:
Q  17 tgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagtttt 72  Q
    |||||||||||| ||||||||||| ||||  || ||||||||||||||||| ||||    
T  39243095 tgtatttttagtcaagaaccatacaaaaaatacctaaagaattgtatctaaatttt 39243150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 43476064 - 43476118
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    ||||||||||||||||||||||| ||| ||| ||||| || |||| |||||||||    
T  43476064 tttagttaagaaccatacgaaaaacacctaaggaattatacctaaattttctcct 43476118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 9281400 - 9281347
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    ||||||||||||||||| |||||| || ||| |||||||| | |||||||||||    
T  9281400 tttagttaagaaccatatgaaaagtacctaaggaattgtaccaaagttttctcc 9281347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 29229414 - 29229358
Alignment:
Q  25 tagttaagaaccatacgaaaa--gcacataaagaattgtatctaagttttctccttt 79  Q
    |||||||||| ||||||||||  ||||||||  ||||||| ||||||||||||||||    
T  29229414 tagttaagaatcatacgaaaaaagcacataagtaattgtacctaagttttctccttt 29229358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 29342714 - 29342658
Alignment:
Q  25 tagttaagaaccatacgaaaa--gcacataaagaattgtatctaagttttctccttt 79  Q
    |||||||||| ||||||||||  ||||||||  ||||||| ||||||||||||||||    
T  29342714 tagttaagaatcatacgaaaaaagcacataagtaattgtacctaagttttctccttt 29342658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 8111692 - 8111744
Alignment:
Q  24 ttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    ||||||||||||||||| ||||| || |||  ||||||| |||||||||||||    
T  8111692 ttagttaagaaccatacaaaaaggacctaagaaattgtaactaagttttctcc 8111744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 9850811 - 9850779
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaag 55  Q
    ||||||||||||||||||||||||||| |||||    
T  9850811 tttagttaagaaccatacgaaaagcacctaaag 9850779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 5762 - 5700
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| || |||||||||||    
T  5762 tatgtatttttagttaagaaccatacgaaaagcacctaaagaattgtaccttagttttctcct 5700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 5823 - 5880
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataa--agaattgtatctaagttttctcctt 78  Q
    ||||||||||||||||||||||||||| |||  | ||||||| |||||||||||||||    
T  5823 tttagttaagaaccatacgaaaagcacctaaggaaaattgtacctaagttttctcctt 5880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 2e-20; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 1138620 - 1138558
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||    
T  1138620 tatgtatttttagttaagaaccatacgaaaagcaccaaaagaattgtacctaagttttctcct 1138558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 15 - 80
Target Start/End: Original strand, 35420722 - 35420787
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttta 80  Q
    ||||||||||||||||||||||||||||||||||  ||| |||||||| |||||||||||||||||    
T  35420722 tatgtatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctccttta 35420787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 15855904 - 15855840
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    ||||||||||||||||||||||||||||||||||  ||| |||||||| ||||||||||||||||    
T  15855904 tatgtatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctccttt 15855840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 20476492 - 20476429
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    ||||||||||||||||||||||||||||||||||  || ||||||||| |||||||||||||||    
T  20476492 tatgtatttttagttaagaaccatacgaaaagcatctagagaattgtacctaagttttctcctt 20476429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 24397356 - 24397415
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttct 74  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||    
T  24397356 tatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 24397415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 33629398 - 33629342
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    |||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||    
T  33629398 tttagttaagaaccataccaaaagcacataaggaattgtacctaagttttctccttt 33629342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 35420669 - 35420609
Alignment:
Q  19 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    ||||||||||||||||||||||||||||||  ||| |||||||| ||||||||||||||||    
T  35420669 tatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctccttt 35420609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 4266043 - 4265980
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    ||||||||||||||||||||||||||||||| ||| |||  ||||||| |||||||||||||||    
T  4266043 tatgtatttttagttaagaaccatacgaaaaacacctaagaaattgtacctaagttttctcctt 4265980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 16473069 - 16473132
Alignment:
Q  19 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctttaga 82  Q
    ||||||||||||||||||||||||||||||  ||| |||||||| ||||||||||||| |||||    
T  16473069 tatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctccattaga 16473132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 20476549 - 20476604
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    ||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  20476549 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcctt 20476604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 16473016 - 16472954
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    ||||||||||||||||||||||||||||||||||  ||| |||||||| ||||||||| ||||    
T  16473016 tatgtatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttttcct 16472954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 2255578 - 2255631
Alignment:
Q  21 tttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttct 74  Q
    ||||||||||||||||| ||||||||||| |||||||||||| |||||||||||    
T  2255578 tttttagttaagaaccacacgaaaagcacctaaagaattgtacctaagttttct 2255631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 15855957 - 15856014
Alignment:
Q  19 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    ||||||||||||||||||||||||||||||  ||| |||||||| |||||||||||||    
T  15855957 tatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctcc 15856014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 21259777 - 21259728
Alignment:
Q  29 taagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  21259777 taagaaccatacgaaaagcacataaagaattgtacgtaagttttctcctt 21259728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 13754344 - 13754289
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    |||||||||||| |||||||||| ||||||| |||||||| |||||||||||||||    
T  13754344 tttagttaagaatcatacgaaaaacacataaggaattgtacctaagttttctcctt 13754289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 19976319 - 19976260
Alignment:
Q  18 gtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    |||||||||||||||||||||||||||| |||||||| |||| ||  |||||||||||||    
T  19976319 gtatttttagttaagaaccatacgaaaatcacataaaaaattatagttaagttttctcct 19976260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 10132372 - 10132426
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    |||||||||||||||||| |||| ||||||| |||||||||||||||||| ||||    
T  10132372 tttagttaagaaccatacaaaaaacacataaggaattgtatctaagttttttcct 10132426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 21259840 - 21259902
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    ||||||||||||||||||||||||| |||||| || ||| |||||||| |||| |||||||||    
T  21259840 tatgtatttttagttaagaaccataagaaaagtacctaaggaattgtacctaaattttctcct 21259902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 35806995 - 35806949
Alignment:
Q  16 atgtatttttagttaagaaccatacgaaaagcacataaagaattgta 62  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||    
T  35806995 atgtatttttagttaagaaccatatgaaaagcacctaaagaattgta 35806949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 8364744 - 8364797
Alignment:
Q  19 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagtttt 72  Q
    |||||||||||||||||||||| |||||||| ||| |||||||| |||||||||    
T  8364744 tatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagtttt 8364797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 1138677 - 1138732
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    ||||||||||||||||||||||||||  ||  |||||||| |||||||||||||||    
T  1138677 tttagttaagaaccatacgaaaagcagctatggaattgtacctaagttttctcctt 1138732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 4266100 - 4266155
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    ||||||||||||||||||||||| ||| ||| |||||||| | |||||||||||||    
T  4266100 tttagttaagaaccatacgaaaaacacctaaggaattgtaccgaagttttctcctt 4266155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 10132339 - 10132280
Alignment:
Q  19 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    |||||||| ||||||||||||| |||| || ||||| ||||||||||||||||| |||||    
T  10132339 tatttttaattaagaaccatacaaaaaacatataaaaaattgtatctaagttttatcctt 10132280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 29141853 - 29141802
Alignment:
Q  28 ttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    |||||||||||||||||| ||| |||  ||||||||||||||||||||||||    
T  29141853 ttaagaaccatacgaaaaacacctaagcaattgtatctaagttttctccttt 29141802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 12807972 - 12807911
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    ||||||||||||||||| ||||||||||||| ||| |||  |||||||| |||||||||||||    
T  12807972 tatgtatttttagttaaaaaccatacgaaaaacacctaagaaattgtat-taagttttctcct 12807911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 49
Target Start/End: Complemental strand, 21262004 - 21261970
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcac 49  Q
    |||||||||||||||||||||||||||||||||||    
T  21262004 tatgtatttttagttaagaaccatacgaaaagcac 21261970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 1164910 - 1164967
Alignment:
Q  19 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    |||||||| |||||||||||||||||||||  ||| |||||||| |||| ||||||||    
T  1164910 tatttttaattaagaaccatacgaaaagcagctaaggaattgtacctaaattttctcc 1164967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 13754401 - 13754462
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    ||||||||||||||||||||||||||||||| ||| |||  |||||||  ||| ||||||||    
T  13754401 tatgtatttttagttaagaaccatacgaaaaacacctaagtaattgtacataaattttctcc 13754462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 21591266 - 21591213
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    ||||||| | ||||||||||||||||| ||| |||||||| |||||||||||||    
T  21591266 tttagttcacaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 21591213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 21595383 - 21595330
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    ||||||| | ||||||||||||||||| ||| |||||||| |||||||||||||    
T  21595383 tttagttcacaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 21595330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 25751570 - 25751619
Alignment:
Q  24 ttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttc 73  Q
    |||||||||||||| ||||||||||| |||| ||||||| ||||||||||    
T  25751570 ttagttaagaaccacacgaaaagcacctaaaaaattgtacctaagttttc 25751619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 32623268 - 32623219
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagtttt 72  Q
    ||||||||||||||||||||||| ||| ||| |||||||| |||||||||    
T  32623268 tttagttaagaaccatacgaaaaacacctaaggaattgtacctaagtttt 32623219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 37552361 - 37552305
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    |||||||||||||| ||| ||||||||  || |||||||| ||||||||||||||||    
T  37552361 tttagttaagaaccgtacaaaaagcacggaatgaattgtacctaagttttctccttt 37552305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 42522931 - 42522987
Alignment:
Q  16 atgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagtttt 72  Q
    |||||||||||||||||||||| || |||| ||| |||| |||| ||||||||||||    
T  42522931 atgtatttttagttaagaaccaaacaaaaaacacctaaaaaattatatctaagtttt 42522987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 17583367 - 17583414
Alignment:
Q  33 aaccatacgaaaagcacataaagaattgtatctaagttttctccttta 80  Q
    ||||||||||||||||| |||  ||||||| |||||||||||||||||    
T  17583367 aaccatacgaaaagcacctaagaaattgtacctaagttttctccttta 17583414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 33629461 - 33629520
Alignment:
Q  19 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    |||||||||||||||| |||||||||| ||  ||| |||||||| |||| ||||||||||    
T  33629461 tatttttagttaagaatcatacgaaaaacatctaaggaattgtacctaaattttctcctt 33629520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 43539225 - 43539280
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    |||||||||| |||||||||||| ||| ||| |||||||| |||| ||||||||||    
T  43539225 tttagttaaggaccatacgaaaaacacctaaggaattgtacctaaattttctcctt 43539280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 37655261 - 37655316
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    |||||||||||||||||||||||||| ||||||      ||||||||| |||||||||||||    
T  37655261 tatgtatttttagttaagaaccatacaaaaagc------agaattgtacctaagttttctcc 37655316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 780915 - 780964
Alignment:
Q  28 ttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    |||||||||||||||||||||| |||  ||||||| ||||||||| ||||    
T  780915 ttaagaaccatacgaaaagcacctaagaaattgtacctaagttttttcct 780964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 12744887 - 12744829
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctc 75  Q
    ||||||||||||||||| |||||||| |||| ||| |||| |||||||| |||||||||||    
T  12744887 tatgtatttttagttaaaaaccatacaaaaaacacctaaa-aattgtat-taagttttctc 12744829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 26152718 - 26152782
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    |||||||||||||||||||  ||| |||||||||  |||| | ||||| |||| |||||||||||    
T  26152718 tatgtatttttagttaagagtcattcgaaaagcagttaaaaatttgtagctaaattttctccttt 26152782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 35276405 - 35276465
Alignment:
Q  17 tgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    ||||||||||| ||||||| |||| |||||||  |||  ||||||||||||||||| ||||    
T  35276405 tgtatttttaggtaagaactatacaaaaagcatctaataaattgtatctaagttttgtcct 35276465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 43539168 - 43539105
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    ||||||||| ||||| |||||||||||||||  || |||  ||||||| ||||||||||||||||    
T  43539168 tatgtatttatagttcagaaccatacgaaaaatacctaagaaattgta-ctaagttttctccttt 43539105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 9e-20; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 15 - 80
Target Start/End: Complemental strand, 15882261 - 15882196
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttta 80  Q
    |||||||||||||||||||||||||| |||||||| ||| |||||||| |||||||||||||||||    
T  15882261 tatgtatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctccttta 15882196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 12234527 - 12234463
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    |||||||||||||||||||||||||||||||||||  |||||||| || ||||||||||||||||    
T  12234527 tatgtatttttagttaagaaccatacgaaaagcacccaaagaattatacctaagttttctccttt 12234463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 15882319 - 15882376
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttta 80  Q
    ||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||    
T  15882319 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctccttta 15882376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 17426745 - 17426802
Alignment:
Q  20 atttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    |||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||    
T  17426745 atttttagttaagaaccatacgaaaagcacctaaaaaattgtacctaagttttctcct 17426802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 23940915 - 23940976
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    ||||||||||||||||| ||||||||||||||||| ||| |||||||| |||||||||||||    
T  23940915 tatgtatttttagttaaaaaccatacgaaaagcacctaaggaattgtaactaagttttctcc 23940976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 24211331 - 24211275
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    |||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  24211331 tttaattaagaaccatacgaaaagcacctaaagaattgtacctaagttttctccttt 24211275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 37114299 - 37114239
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctc 75  Q
    |||||||||||| |||||||||||||||||||||| ||| |||||||| ||||||||||||    
T  37114299 tatgtatttttaattaagaaccatacgaaaagcacctaaggaattgtacctaagttttctc 37114239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 17426681 - 17426626
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    ||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  17426681 tttagttaagaaccatacgaaaagcacctaatgaattgtacctaagttttctcctt 17426626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 29781069 - 29781132
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    ||||||||||||||||||||||||||||||||||  ||| |||||| | |||||||||||||||    
T  29781069 tatgtatttttagttaagaaccatacgaaaagcatctaaggaattggacctaagttttctcctt 29781132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 33100703 - 33100645
Alignment:
Q  18 gtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    |||||||||||||||||||||||||||||||| |||  ||||||| |||||||||||||    
T  33100703 gtatttttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttctcc 33100645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 38629535 - 38629473
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||  ||| |||||||||    
T  38629535 tatgtatttttagttaagaaccatacgaaaagcatttaaagaattgtacttaaattttctcct 38629473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 24211388 - 24211449
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    ||||||||| || |||||||||||||||||||||| ||| |||||||| |||||||||||||    
T  24211388 tatgtatttctatttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 24211449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 33100755 - 33100815
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctc 75  Q
    ||||| |||||||||||||||| ||||||||||||||||  ||||||| ||||||||||||    
T  33100755 tatgtttttttagttaagaaccgtacgaaaagcacataagaaattgtacctaagttttctc 33100815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 35467288 - 35467344
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    ||||||||||||||||||||||||||||||| ||||||||  |||||||| ||||||    
T  35467288 tttagttaagaaccatacgaaaagcacataaggaattgtacgtaagttttttccttt 35467344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 40891131 - 40891182
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttct 74  Q
    ||||||||||||||||||||||||||| ||| |||||||| |||||||||||    
T  40891131 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 40891182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 8210376 - 8210322
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    |||||||||||| |||||||||||||| ||| |||||||| ||||||||||||||    
T  8210376 tttagttaagaatcatacgaaaagcacctaaggaattgtacctaagttttctcct 8210322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 11828713 - 11828775
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    ||||||||||||||||||||| ||| ||||||||  ||| |||||||| ||||||||||||||    
T  11828713 tatgtatttttagttaagaacgatatgaaaagcaagtaaggaattgtacctaagttttctcct 11828775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 24741876 - 24741822
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    ||||||||||||||||||||||||||| ||| |||||||| ||||||||| ||||    
T  24741876 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttttcct 24741822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 38629592 - 38629646
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    ||||||||||||||||||||||| ||| ||| |||||||| ||||||||||||||    
T  38629592 tttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttctcct 38629646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 35467231 - 35467167
Alignment:
Q  16 atgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttta 80  Q
    |||||||||||||||||||||| || ||||| |  |||||||||||| ||||||||| |||||||    
T  35467231 atgtatttttagttaagaaccacacaaaaagtatctaaagaattgtacctaagttttgtccttta 35467167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 38520075 - 38520015
Alignment:
Q  19 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    ||||||||||||||||||||||||||||||  ||| ||||| || |||| |||||||||||    
T  38520075 tatttttagttaagaaccatacgaaaagcaactaaggaattatacctaaattttctccttt 38520015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 62
Target Start/End: Complemental strand, 4262029 - 4261990
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgta 62  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  4262029 tttagttaagaaccatacgaaaagcacctaaagaattgta 4261990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 38520136 - 38520191
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    ||||||||| || |||||||||||||| ||| |||||||| |||||||||||||||    
T  38520136 tttagttaaaaaacatacgaaaagcacttaaggaattgtacctaagttttctcctt 38520191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 4035798 - 4035740
Alignment:
Q  19 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    |||||||||||||| |||||||||||||||| | | ||| |||| ||||||||||||||    
T  4035798 tatttttagttaagtaccatacgaaaagcacctgaggaactgtacctaagttttctcct 4035740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 14834725 - 14834676
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagtttt 72  Q
    ||||||||||||||||||||||||||| ||| ||||||||  ||||||||    
T  14834725 tttagttaagaaccatacgaaaagcacgtaaggaattgtacgtaagtttt 14834676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 24741935 - 24741980
Alignment:
Q  17 tgtatttttagttaagaaccatacgaaaagcacataaagaattgta 62  Q
    ||||||||||||||||||||||||||||| ||| | ||||||||||    
T  24741935 tgtatttttagttaagaaccatacgaaaatcacctcaagaattgta 24741980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 5356234 - 5356294
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctc 75  Q
    |||||||||||| ||||||| |||||||||| ||| ||   ||||||||||||||||||||    
T  5356234 tatgtatttttaattaagaatcatacgaaaaacacctacgaaattgtatctaagttttctc 5356294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 47
Target Start/End: Complemental strand, 10778717 - 10778686
Alignment:
Q  16 atgtatttttagttaagaaccatacgaaaagc 47  Q
    ||||||||||||||||||||||||||||||||    
T  10778717 atgtatttttagttaagaaccatacgaaaagc 10778686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 12234585 - 12234640
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    ||||||||| ||||||||||||||||  |||  ||||||| |||||||||||||||    
T  12234585 tttagttaataaccatacgaaaagcatctaagaaattgtacctaagttttctcctt 12234640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 23940857 - 23940802
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    |||||||||||| |||||||||||||| |||  ||||||| | |||||||||||||    
T  23940857 tttagttaagaatcatacgaaaagcacttaagaaattgtaccgaagttttctcctt 23940802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 38405198 - 38405135
Alignment:
Q  16 atgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    ||||||||||||||||||||||||| ||||| || || | ||||||| |||| |||| ||||||    
T  38405198 atgtatttttagttaagaaccatacaaaaagtacttacataattgtacctaaattttgtccttt 38405135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 29781012 - 29780963
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagtttt 72  Q
    ||||||||| ||||||||||||||||| ||| |||||||| |||| ||||    
T  29781012 tttagttaaaaaccatacgaaaagcacctaaggaattgtacctaaatttt 29780963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 36898266 - 36898322
Alignment:
Q  17 tgtatttttagttaagaaccatacg-aaaagcacataaagaattgtatctaagtttt 72  Q
    ||||||||||||||||||||||  | ||||||| |||||||||||||| ||| ||||    
T  36898266 tgtatttttagttaagaaccatttgaaaaagcatataaagaattgtatgtaaatttt 36898322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 45895 - 45831
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    |||||||||||||||||||||||||| |||||||| ||| |||||||| ||||||||||||||||    
T  45895 tatgtatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctccttt 45831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 45952 - 46005
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    ||||||||||||||||| ||||||||| ||| |||||||| |||||||||||||    
T  45952 tttagttaagaaccataagaaaagcacctaaggaattgtacctaagttttctcc 46005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 26464 - 26403
Alignment:
Q  17 tgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    ||||||||||||||| ||||||||||||||||| ||| |||||||| |||||||||||||||    
T  26464 tgtatttttagttaataaccatacgaaaagcacctaaggaattgtacctaagttttctcctt 26403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0653 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 3503 - 3567
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    |||||||||||| ||||||||||||||||||| || |||||||||||| |||| |||||||||||    
T  3503 tatgtatttttatttaagaaccatacgaaaagtacctaaagaattgtacctaaattttctccttt 3567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0653; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 3446 - 3393
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    |||| ||||||||||||| ||||||||  || |||||||| |||||||||||||    
T  3446 tttaattaagaaccatacaaaaagcaccaaatgaattgtacctaagttttctcc 3393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 51120 - 51060
Alignment:
Q  19 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    |||||||||||||||||||||||||||| || ||| |||||||| ||||||||||||||||    
T  51120 tatttttagttaagaaccatacgaaaaggacctaaggaattgtacctaagttttctccttt 51060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 82
Target Start/End: Original strand, 51181 - 51240
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctttaga 82  Q
    ||||||||||||||||| |||||| || ||| |||||||| |||||||||||||||||||    
T  51181 tttagttaagaaccatatgaaaagtacctaaggaattgtacctaagttttctcctttaga 51240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 15 - 80
Target Start/End: Original strand, 72381 - 72445
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttta 80  Q
    ||||||||||||||||| ||||||||||||||||| ||| |||||| | |||||||||||||||||    
T  72381 tatgtatttttagttaaaaaccatacgaaaagcacttaaggaattgca-ctaagttttctccttta 72445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 2053 - 2111
Alignment:
Q  18 gtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcc 76  Q
    ||||||||||||||||||||||  |||||||| ||| |||||||| |||||||||||||    
T  2053 gtatttttagttaagaaccatataaaaagcacctaaggaattgtacctaagttttctcc 2111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 1992 - 1936
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    |||||||||||||||||| |||||||| |||| |||| || |||| |||||||||||    
T  1992 tttagttaagaaccatacaaaaagcacctaaacaattatacctaaattttctccttt 1936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 75
Target Start/End: Original strand, 48244 - 48296
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctc 75  Q
    ||||||||||||| ||||||||||||  ||| |||||||||||||||||||||    
T  48244 tttagttaagaactatacgaaaagcatctaaggaattgtatctaagttttctc 48296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 48187 - 48124
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    |||||||||||| |||| ||||||||||||||||| |||| |||| ||  |||||||| |||||    
T  48187 tatgtatttttaattaaaaaccatacgaaaagcacctaaaaaattatacgtaagttttgtcctt 48124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 14503 - 14440
Alignment:
Q  15 tatgtatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcctt 78  Q
    |||||||||||||||||| |||||| ||||| ||| |||  ||||||| |||||||||||||||    
T  14503 tatgtatttttagttaagtaccataggaaaaacacctaagaaattgtacctaagttttctcctt 14440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 75
Target Start/End: Original strand, 14560 - 14612
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctc 75  Q
    ||||||||||||| |||||||||||||  || |||||||| ||||||||||||    
T  14560 tttagttaagaacgatacgaaaagcacccaaggaattgtacctaagttttctc 14612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 7143 - 7085
Alignment:
Q  19 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    |||||||||||||||| |||||||||| ||| ||| |||||||| |||| |||||||||    
T  7143 tatttttagttaagaatcatacgaaaaacacctaaggaattgtacctaaattttctcct 7085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 7204 - 7258
Alignment:
Q  23 tttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctcct 77  Q
    ||||||||||||||||||||||||||| ||| |||| ||| |||| |||||||||    
T  7204 tttagttaagaaccatacgaaaagcacctaaggaatcgtacctaaattttctcct 7258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 10173 - 10113
Alignment:
Q  19 tatttttagttaagaaccatacgaaaagcacataaagaattgtatctaagttttctccttt 79  Q
    ||||||||||||||||||||||| ||| ||| ||| ||||| || ||||||||||| ||||    
T  10173 tatttttagttaagaaccatacgcaaaacacctaaggaattatacctaagttttctacttt 10113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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