View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14713_high_11 (Length: 568)
Name: NF14713_high_11
Description: NF14713
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14713_high_11 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 514; Significance: 0; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 514; E-Value: 0
Query Start/End: Original strand, 18 - 555
Target Start/End: Complemental strand, 3212596 - 3212060
Alignment:
| Q |
18 |
gatcttaaccaattttgtgcacatattaaagcttcaacagtgtgggttgtaagagagctcctataacaactaagaactctacccccagtgctaaaagcag |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
3212596 |
gatcttaaccaattttgtgcacatattaaagcttcaacagtgtgggttgtaagagagctcctataacaactaagaactctacccc-agtgctaaaagcag |
3212498 |
T |
|
| Q |
118 |
actccgaagcaacagttgatattggcatagccaatatatctctagctattagaccaagagtagagtatttggtggaattcaccttccaccaattcaagat |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
3212497 |
actccgaagcaacagttgatattggcatagccaatatatctctagctattagaccaagagtagggtatttggtggaattcaccttccaccaattcaagat |
3212398 |
T |
|
| Q |
218 |
gtcaaaatcaggatttttcttctccctaggctctgagagatagatatccacttcagtttgactcaaattcggatcttgatccatatccttctcaaattga |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3212397 |
gtcaaaatcaggatttttcttctccctaggctctgagagatagatatccacttcagtttgactcaaattcggatcttgatccatatccttctcaaattga |
3212298 |
T |
|
| Q |
318 |
tcatccacatcttctgtaacaaattctgaaccttctatttcttgtgagacactttctgcttggcctttatttgagaaacgactatagctttcaaacattt |
417 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3212297 |
tcatccacatcttctgtaacaaattctgaaccttctatttcttgtgaaacactttctgcttggcctttatttgagaaacgactatagctttcaaacattt |
3212198 |
T |
|
| Q |
418 |
tgtttaaagcttcctttaccttatcacacaaagaatcagcaacttccttttcataatacttattcaatccccaattaataaattggaacttacgacgagg |
517 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
3212197 |
tgtttaaagcttcctttaccttatcacacaaagaatcagcaacttccttttcataatacttattcaatccccaattaataaattggaacttacaacgagg |
3212098 |
T |
|
| Q |
518 |
atcaaaaattacagcaataaagaccaacatattcatct |
555 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
3212097 |
ataaaaaattacagcaataaagaccaacatattcatct |
3212060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 99 - 230
Target Start/End: Original strand, 11217253 - 11217383
Alignment:
| Q |
99 |
cccccagtgctaaaagcagactccgaagcaacagttgatattggcatagccaatatatctctagctattagaccaagagtagagtatttggtggaattca |
198 |
Q |
| |
|
||||| ||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |
|
|
| T |
11217253 |
cccccggtgctaaaagcagactctgaagcaacatttgacgttggcatagccaatatatctctagctattagaccaagagtag-gtatttgatggaattca |
11217351 |
T |
|
| Q |
199 |
ccttccaccaattcaagatgtcaaaatcagga |
230 |
Q |
| |
|
|||||||||| |||||||||||||||| |||| |
|
|
| T |
11217352 |
ccttccaccagttcaagatgtcaaaattagga |
11217383 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 400 - 509
Target Start/End: Original strand, 11217391 - 11217500
Alignment:
| Q |
400 |
tatagctttcaaacattttgtttaaagcttcctttaccttatcacacaaagaatcagcaacttccttttcataatacttattcaatccccaattaataaa |
499 |
Q |
| |
|
|||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| || ||| ||||||||||||||||||| | |||||||||| |
|
|
| T |
11217391 |
tatagctttcaaacatattgtttaaagcttctcttaccttatcacacaaagaatcagcagctgtcttatcataatacttattcaatcactaattaataaa |
11217490 |
T |
|
| Q |
500 |
ttggaactta |
509 |
Q |
| |
|
| ||||||| |
|
|
| T |
11217491 |
ctagaactta |
11217500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 474; Significance: 0; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 474; E-Value: 0
Query Start/End: Original strand, 66 - 555
Target Start/End: Complemental strand, 38337561 - 38337072
Alignment:
| Q |
66 |
gtaagagagctcctataacaactaagaactctacccccagtgctaaaagcagactccgaagcaacagttgatattggcatagccaatatatctctagcta |
165 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38337561 |
gtaagagagctcctataacaactaagaactctacccccagtgctaaaagcagactccgaagcaacagttgatattggcatagccaatatatctctagcta |
38337462 |
T |
|
| Q |
166 |
ttagaccaagagtagagtatttggtggaattcaccttccaccaattcaagatgtcaaaatcaggatttttcttctccctaggctctgagagatagatatc |
265 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38337461 |
ttagaccaagagtagggtatttggtggaattcaccttccaccaattcaagatgtcaaaatcaggatttttcttctccctaggctctgagagatagatatc |
38337362 |
T |
|
| Q |
266 |
cacttcagtttgactcaaattcggatcttgatccatatccttctcaaattgatcatccacatcttctgtaacaaattctgaaccttctatttcttgtgag |
365 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
38337361 |
cacttcagtttgactcaaattcggatcttgatccatatccttctcaaattgatcatccacatcttctgtaacaaattatgaaccttctatttcttgtgaa |
38337262 |
T |
|
| Q |
366 |
acactttctgcttggcctttatttgagaaacgactatagctttcaaacattttgtttaaagcttcctttaccttatcacacaaagaatcagcaacttcct |
465 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38337261 |
acactttctgcttggcctttatttgagaaacgactatagctttcaaacattttgtttaaagcttcctttaccttatcacacaaagaatcagcaacttcct |
38337162 |
T |
|
| Q |
466 |
tttcataatacttattcaatccccaattaataaattggaacttacgacgaggatcaaaaattacagcaataaagaccaacatattcatct |
555 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
38337161 |
tttcataatacttattcaatccccaattaataaattggaacttacgacgaggataaaaaattacagcaataaagaccaacatattcatct |
38337072 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 25 - 241
Target Start/End: Complemental strand, 19350597 - 19350381
Alignment:
| Q |
25 |
accaattttgtgcacatattaaagcttcaacagtgtgggttgtaagagagctcctataacaactaagaactctacccccagtgctaaaagcagactccga |
124 |
Q |
| |
|
|||||||||| ||||| | ||| |||||||| || | | ||||||||||||| | |||||| | || ||||||| || ||||||||| | ||||| || |
|
|
| T |
19350597 |
accaattttgggcacaaactaacgcttcaactgtctttggtgtaagagagctcttgtaacaatttagcactctacttccggtgctaaaaccggactctga |
19350498 |
T |
|
| Q |
125 |
agcaacagttgatattggcatagccaatatatctctagctattagaccaagagtagagtatttggtggaattcaccttccaccaattcaagatgtcaaaa |
224 |
Q |
| |
|
||||||||| || || ||||| ||||| | ||||||||| | | | ||||| ||| |||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
19350497 |
agcaacagtagaaataggcatggccaacacatctctagcaacttgggcaagaataggatatttggtggaattcaccttccaccaattcaatatgtcaaaa |
19350398 |
T |
|
| Q |
225 |
tcaggatttttcttctc |
241 |
Q |
| |
|
| |||| |||||||||| |
|
|
| T |
19350397 |
ttaggacttttcttctc |
19350381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 429 - 483
Target Start/End: Complemental strand, 19350182 - 19350128
Alignment:
| Q |
429 |
tcctttaccttatcacacaaagaatcagcaacttccttttcataatacttattca |
483 |
Q |
| |
|
||||||||||||||| ||||| ||||||||| ||||||||||||| | ||||||| |
|
|
| T |
19350182 |
tcctttaccttatcagacaaaaaatcagcaagttccttttcataacatttattca |
19350128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 396; Significance: 0; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 396; E-Value: 0
Query Start/End: Original strand, 18 - 441
Target Start/End: Original strand, 36078257 - 36078680
Alignment:
| Q |
18 |
gatcttaaccaattttgtgcacatattaaagcttcaacagtgtgggttgtaagagagctcctataacaactaagaactctacccccagtgctaaaagcag |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36078257 |
gatcttaaccaattttgtgcacatattaaagcttcaacagtgtgggttgtaagagagctcctataacaactaagaactctacccccagtgctaaaagcag |
36078356 |
T |
|
| Q |
118 |
actccgaagcaacagttgatattggcatagccaatatatctctagctattagaccaagagtagagtatttggtggaattcaccttccaccaattcaagat |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
36078357 |
actccgaagcaacagttgatattggcatagccaatatatctctagatattagaccatgagtagggtatttggtggaattcaccttccaccaattcaagat |
36078456 |
T |
|
| Q |
218 |
gtcaaaatcaggatttttcttctccctaggctctgagagatagatatccacttcagtttgactcaaattcggatcttgatccatatccttctcaaattga |
317 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36078457 |
gtcaaaatcaggatttttcttctccctagactctgagagatagatatccacttcagtttgactcaaattcggatcttgatccatatccttctcaaattga |
36078556 |
T |
|
| Q |
318 |
tcatccacatcttctgtaacaaattctgaaccttctatttcttgtgagacactttctgcttggcctttatttgagaaacgactatagctttcaaacattt |
417 |
Q |
| |
|
||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36078557 |
tcatcaacatcttctgtaacaaattatgaaccttctatttcttgtgaaacactttctgcttggcctttatttgagaaacgactatagctttcaaacattt |
36078656 |
T |
|
| Q |
418 |
tgtttaaagcttcctttaccttat |
441 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
36078657 |
tgtttaaagcttcctttaccttat |
36078680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 18 - 309
Target Start/End: Original strand, 29637482 - 29637773
Alignment:
| Q |
18 |
gatcttaaccaattttgtgcacatattaaagcttcaacagtgtgggttgtaagagagctcctataacaactaagaactctacccccagtgctaaaagcag |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29637482 |
gatcttaaccaattttgtgcacatattaaagcttcaacagtgtgggttgtaagagagctcctataacaactaagaactctacccccagtgctaaaagcag |
29637581 |
T |
|
| Q |
118 |
actccgaagcaacagttgatattggcatagccaatatatctctagctattagaccaagagtagagtatttggtggaattcaccttccaccaattcaagat |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
29637582 |
actccgaagcaacagttgatattggcatagccaatatatctctagctattagaccaagagtagggtatttggtggaattcaccttccaccaattcaagat |
29637681 |
T |
|
| Q |
218 |
gtcaaaatcaggatttttcttctccctaggctctgagagatagatatccacttcagtttgactcaaattcggatcttgatccatatccttct |
309 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29637682 |
gtcaaaatcaggatttttcttctccctaggctctgagagatagatatccacttcagtttgactcaaattcggatcttgatccatatccttct |
29637773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 348 - 555
Target Start/End: Original strand, 29637768 - 29637975
Alignment:
| Q |
348 |
ccttctatttcttgtgagacactttctgcttggcctttatttgagaaacgactatagctttcaaacattttgtttaaagcttcctttaccttatcacaca |
447 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29637768 |
ccttctatttcttgtgagacactttctgcttggcctttatttgagaaacgactatagctttcaaacattttgtttaaagcttcctttaccttatcacaca |
29637867 |
T |
|
| Q |
448 |
aagaatcagcaacttccttttcataatacttattcaatccccaattaataaattggaacttacgacgaggatcaaaaattacagcaataaagaccaacat |
547 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29637868 |
aagaatcagcaacttccttttcataatacttattcaatccccaattaataaattggaacttacgacgaggatcaaaaattacagcaataaagaccaacat |
29637967 |
T |
|
| Q |
548 |
attcatct |
555 |
Q |
| |
|
|||||||| |
|
|
| T |
29637968 |
attcatct |
29637975 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 204; Significance: 1e-111; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 348 - 555
Target Start/End: Original strand, 20417774 - 20417981
Alignment:
| Q |
348 |
ccttctatttcttgtgagacactttctgcttggcctttatttgagaaacgactatagctttcaaacattttgtttaaagcttcctttaccttatcacaca |
447 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20417774 |
ccttctatttcttgtgagacactttctgcttggcctttatttgagaaacgactatagctttcaaacattttgtttaaagcttcctttaccttatcacaca |
20417873 |
T |
|
| Q |
448 |
aagaatcagcaacttccttttcataatacttattcaatccccaattaataaattggaacttacgacgaggatcaaaaattacagcaataaagaccaacat |
547 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
20417874 |
aagaatcagcaacttccttttcataatacttattcaatccccaattaataaattggaacttacgacgaggataaaaaattacagcaataaagaccaacat |
20417973 |
T |
|
| Q |
548 |
attcatct |
555 |
Q |
| |
|
|||||||| |
|
|
| T |
20417974 |
attcatct |
20417981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 45 - 207
Target Start/End: Complemental strand, 26293704 - 26293542
Alignment:
| Q |
45 |
aaagcttcaacagtgtgggttgtaagagagctcctataacaactaagaactctacccccagtgctaaaagcagactccgaagcaacagttgatattggca |
144 |
Q |
| |
|
|||||||||||| |||| | ||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||| ||| |||||||||| |
|
|
| T |
26293704 |
aaagcttcaacaatgtgtggtgtaagagagctcctataacaactaagaactctacttctgatgctaaaaacagactccgaagcaatagtagatattggca |
26293605 |
T |
|
| Q |
145 |
tagccaatatatctctagctattagaccaagagtagagtatttggtggaattcaccttccacc |
207 |
Q |
| |
|
||||||| ||||||| ||| |||||| ||||||| |||||||||| |||| |||||||||| |
|
|
| T |
26293604 |
tagccaaaatatctccggctgttagacaaagagtatggtatttggtgaaatttaccttccacc |
26293542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 200 - 324
Target Start/End: Complemental strand, 26293170 - 26293046
Alignment:
| Q |
200 |
cttccaccaattcaagatgtcaaaatcaggatttttcttctccctaggctctgagagatagatatccacttcagtttgactcaaattcggatcttgatcc |
299 |
Q |
| |
|
||||||||| |||||||||||||||||| |||||||||||| | ||||||| || ||| | |||||||||| ||| ||||| |||||||||||||||| |
|
|
| T |
26293170 |
cttccaccagttcaagatgtcaaaatcatgatttttcttctacttaggctccatgatatacaaatccacttcatttttactcatattcggatcttgatcc |
26293071 |
T |
|
| Q |
300 |
atatccttctcaaattgatcatcca |
324 |
Q |
| |
|
|| |||||||||||| |||||||| |
|
|
| T |
26293070 |
atgcccttctcaaatttatcatcca |
26293046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 24 - 224
Target Start/End: Complemental strand, 30521635 - 30521435
Alignment:
| Q |
24 |
aaccaattttgtgcacatattaaagcttcaacagtgtgggttgtaagagagctcctataacaactaagaactctacccccagtgctaaaagcagactccg |
123 |
Q |
| |
|
||||||| ||||||||| |||||||| ||||| || | | |||||||| ||||||||| | |||||| ||||||||| |||||||| ||||| || | |
|
|
| T |
30521635 |
aaccaatcttgtgcacaaattaaagcctcaactgtttttggagtaagagaactcctataattattaagaattctacccccggtgctaaatgcagattctg |
30521536 |
T |
|
| Q |
124 |
aagcaacagttgatattggcatagccaatatatctctagctattagaccaagagtagagtatttggtggaattcaccttccaccaattcaagatgtcaaa |
223 |
Q |
| |
|
||||||| || || | ||||||||| | || |||| | || || || ||||| ||| ||||| | |||||||||||||||||||||||||| ||||| |
|
|
| T |
30521535 |
aagcaactgtggacactggcatagctagtacatctttggcaatcagtccaagtataggatatttactagaattcaccttccaccaattcaagatatcaaa |
30521436 |
T |
|
| Q |
224 |
a |
224 |
Q |
| |
|
| |
|
|
| T |
30521435 |
a |
30521435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 61; Significance: 6e-26; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 25 - 241
Target Start/End: Complemental strand, 25346773 - 25346557
Alignment:
| Q |
25 |
accaattttgtgcacatattaaagcttcaacagtgtgggttgtaagagagctcctataacaactaagaactctacccccagtgctaaaagcagactccga |
124 |
Q |
| |
|
|||||||||| ||||| ||||| |||||||| || | ||||||||||||| | |||||| | || |||||||| || ||||||||| ||||| || |
|
|
| T |
25346773 |
accaattttgggcacaaattaatgcttcaactgtctttagtgtaagagagctcttgtaacaatttagcactctacctccggtgctaaaaatggactctga |
25346674 |
T |
|
| Q |
125 |
agcaacagttgatattggcatagccaatatatctctagctattagaccaagagtagagtatttggtggaattcaccttccaccaattcaagatgtcaaaa |
224 |
Q |
| |
|
||||||| | || | ||||| ||||| | ||||||||||| | | ||||| ||| ||||||||||||||||||||| |||||||||| ||||||||| |
|
|
| T |
25346673 |
agcaacaatagaaacaggcatggccaacacatctctagctacttgggcaagaataggatatttggtggaattcaccttcaaccaattcaatatgtcaaaa |
25346574 |
T |
|
| Q |
225 |
tcaggatttttcttctc |
241 |
Q |
| |
|
| |||| |||||||||| |
|
|
| T |
25346573 |
ttaggacttttcttctc |
25346557 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 429 - 502
Target Start/End: Complemental strand, 25346357 - 25346284
Alignment:
| Q |
429 |
tcctttaccttatcacacaaagaatcagcaacttccttttcataatacttattcaatccccaattaataaattg |
502 |
Q |
| |
|
||||||||||||||| ||||| ||||| ||| ||||||||||||| | ||||||| ||||| |||| |||||| |
|
|
| T |
25346357 |
tcctttaccttatcagacaaaaaatcaccaagttccttttcataacatttattcatgccccacttaacaaattg |
25346284 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 25 - 230
Target Start/End: Complemental strand, 24947482 - 24947277
Alignment:
| Q |
25 |
accaattttgtgcacatattaaagcttcaacagtgtgggttgtaagagagctcctataacaactaagaactctacccccagtgctaaaagcagactccga |
124 |
Q |
| |
|
|||||||||| ||||| | ||| |||||||| || | | ||||||||||||||| |||||| | || |||||||| || || |||||||| |||| || |
|
|
| T |
24947482 |
accaattttgggcacaaactaatgcttcaactgtctttggtgtaagagagctcctgtaacaatttagcactctacctccggtactaaaagcgaactctga |
24947383 |
T |
|
| Q |
125 |
agcaacagttgatattggcatagccaatatatctctagctattagaccaagagtagagtatttggtggaattcaccttccaccaattcaagatgtcaaaa |
224 |
Q |
| |
|
||||||| | || || ||||| ||||| | ||||||||| | | | ||||| ||| |||| |||||||||||| |||||||||||||| ||||||||| |
|
|
| T |
24947382 |
agcaacaatagaaataggcatggccaacacatctctagcaacttgggcaagaataggatattcggtggaattcactttccaccaattcaatatgtcaaaa |
24947283 |
T |
|
| Q |
225 |
tcagga |
230 |
Q |
| |
|
| |||| |
|
|
| T |
24947282 |
ttagga |
24947277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 429 - 508
Target Start/End: Complemental strand, 18349075 - 18348996
Alignment:
| Q |
429 |
tcctttaccttatcacacaaagaatcagcaacttccttttcataatacttattcaatccccaattaataaattggaactt |
508 |
Q |
| |
|
||||||| ||||||||||||| ||||||||| ||||||||||||||| |||||||| ||||| |||| |||||| ||||| |
|
|
| T |
18349075 |
tcctttatcttatcacacaaaaaatcagcaagttccttttcataatatttattcaagccccatttaacaaattgaaactt |
18348996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 25 - 197
Target Start/End: Original strand, 12854082 - 12854254
Alignment:
| Q |
25 |
accaattttgtgcacatattaaagcttcaacagtgtgggttgtaagagagctcctataacaactaagaactctacccccagtgctaaaagcagactccga |
124 |
Q |
| |
|
|||||||||| ||||| | ||| |||||||| || | | ||||||||||||| | |||||| | || |||||||| || ||||||||||| ||||| || |
|
|
| T |
12854082 |
accaattttgggcacaaactaatgcttcaactgtcttcggtgtaagagagctcatgtaacaatttagcactctacctccggtgctaaaagcggactctga |
12854181 |
T |
|
| Q |
125 |
agcaacagttgatattggcatagccaatatatctctagctattagaccaagagtagagtatttggtggaattc |
197 |
Q |
| |
|
||||||||| || | ||||| ||||| | ||||||||| | | | ||||| ||| ||||||||||||||| |
|
|
| T |
12854182 |
agcaacagtagaaacaggcatggccaacacatctctagcaacttgggcaagaataggatatttggtggaattc |
12854254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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