View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14713_high_17 (Length: 461)

Name: NF14713_high_17
Description: NF14713
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14713_high_17
NF14713_high_17
[»] chr8 (41 HSPs)
chr8 (21-445)||(45547841-45548270)
chr8 (168-390)||(45540318-45540534)
chr8 (168-248)||(45540695-45540776)
chr8 (45-192)||(32924167-32924313)
chr8 (71-217)||(32975698-32975845)
chr8 (292-389)||(24504057-24504154)
chr8 (292-372)||(13089766-13089850)
chr8 (71-217)||(34286492-34286638)
chr8 (292-388)||(8444263-8444356)
chr8 (82-217)||(38895681-38895817)
chr8 (71-217)||(24350447-24350594)
chr8 (292-379)||(24581449-24581536)
chr8 (47-220)||(14942411-14942585)
chr8 (114-211)||(25465781-25465878)
chr8 (45-217)||(32131425-32131598)
chr8 (71-217)||(41145324-41145473)
chr8 (292-379)||(10230104-10230191)
chr8 (82-193)||(14724918-14725029)
chr8 (48-217)||(16972284-16972455)
chr8 (137-192)||(25333655-25333710)
chr8 (71-214)||(28879069-28879210)
chr8 (104-220)||(2563402-2563519)
chr8 (145-209)||(24087256-24087321)
chr8 (292-356)||(4034301-4034365)
chr8 (94-217)||(10298855-10298978)
chr8 (45-124)||(26046978-26047057)
chr8 (114-220)||(30974043-30974150)
chr8 (71-220)||(2669659-2669809)
chr8 (137-214)||(9131059-9131137)
chr8 (160-217)||(10213795-10213853)
chr8 (45-91)||(11988308-11988354)
chr8 (292-365)||(25582581-25582654)
chr8 (46-91)||(29713289-29713334)
chr8 (137-217)||(35055499-35055579)
chr8 (104-193)||(36907597-36907686)
chr8 (137-217)||(37410841-37410922)
chr8 (137-217)||(42102183-42102264)
chr8 (40-88)||(2669763-2669811)
chr8 (160-217)||(8752906-8752965)
chr8 (100-180)||(9782223-9782303)
chr8 (49-220)||(19925546-19925718)
[»] chr2 (33 HSPs)
chr2 (45-220)||(21788442-21788618)
chr2 (292-390)||(2702258-2702356)
chr2 (292-389)||(12410790-12410887)
chr2 (292-389)||(12422850-12422947)
chr2 (292-374)||(27271658-27271740)
chr2 (292-389)||(6764423-6764520)
chr2 (292-389)||(37647968-37648065)
chr2 (292-381)||(11031809-11031898)
chr2 (299-379)||(34394492-34394572)
chr2 (113-214)||(8832510-8832612)
chr2 (62-217)||(4004821-4004977)
chr2 (45-214)||(4026911-4027080)
chr2 (40-134)||(34913402-34913496)
chr2 (49-217)||(15155802-15155971)
chr2 (45-217)||(33321240-33321413)
chr2 (92-193)||(42064883-42064984)
chr2 (83-217)||(36501443-36501578)
chr2 (137-214)||(38216096-38216174)
chr2 (73-220)||(11776997-11777145)
chr2 (71-217)||(25836641-25836787)
chr2 (292-369)||(7900954-7901031)
chr2 (48-193)||(29774733-29774878)
chr2 (45-217)||(37409628-37409801)
chr2 (40-88)||(21788572-21788620)
chr2 (127-195)||(35731203-35731271)
chr2 (47-218)||(38471718-38471890)
chr2 (45-124)||(755764-755843)
chr2 (115-217)||(30382197-30382300)
chr2 (127-193)||(7480852-7480918)
chr2 (127-220)||(12950040-12950134)
chr2 (144-217)||(22898285-22898359)
chr2 (136-193)||(23956217-23956274)
chr2 (104-192)||(16108076-16108164)
[»] chr7 (37 HSPs)
chr7 (40-220)||(44613398-44613579)
chr7 (292-389)||(28782015-28782112)
chr7 (292-390)||(1032222-1032320)
chr7 (292-389)||(9948933-9949030)
chr7 (292-376)||(11621380-11621464)
chr7 (292-389)||(9942602-9942699)
chr7 (292-372)||(40871302-40871382)
chr7 (45-189)||(48021605-48021748)
chr7 (92-217)||(39279461-39279588)
chr7 (40-193)||(28759790-28759946)
chr7 (45-217)||(29390479-29390651)
chr7 (47-217)||(22032749-22032920)
chr7 (71-217)||(29378656-29378803)
chr7 (100-220)||(47654339-47654460)
chr7 (82-220)||(37465811-37465951)
chr7 (71-193)||(47648549-47648670)
chr7 (45-217)||(38372543-38372716)
chr7 (81-193)||(14691252-14691364)
chr7 (47-214)||(22575573-22575741)
chr7 (160-214)||(33204934-33204989)
chr7 (294-372)||(12622906-12622984)
chr7 (137-217)||(16932858-16932939)
chr7 (137-217)||(16938241-16938322)
chr7 (137-217)||(16958892-16958973)
chr7 (137-217)||(33288003-33288084)
chr7 (299-379)||(17193893-17193972)
chr7 (299-369)||(15669718-15669787)
chr7 (55-217)||(34922926-34923091)
chr7 (71-220)||(35809101-35809251)
chr7 (84-193)||(8180544-8180653)
chr7 (292-369)||(18299447-18299523)
chr7 (292-369)||(29626953-29627029)
chr7 (56-218)||(43391717-43391880)
chr7 (160-220)||(43818803-43818864)
chr7 (71-217)||(20888584-20888732)
chr7 (45-89)||(22515564-22515608)
chr7 (40-88)||(44613396-44613444)
[»] chr4 (49 HSPs)
chr4 (40-220)||(41228883-41229064)
chr4 (292-389)||(43499300-43499397)
chr4 (292-390)||(39059723-39059821)
chr4 (295-372)||(37870649-37870726)
chr4 (293-388)||(36651742-36651837)
chr4 (40-214)||(46704201-46704375)
chr4 (292-390)||(9896508-9896606)
chr4 (81-217)||(18630823-18630960)
chr4 (45-212)||(29877624-29877792)
chr4 (45-217)||(23297423-23297593)
chr4 (71-217)||(48591352-48591499)
chr4 (295-389)||(7743575-7743669)
chr4 (73-193)||(36298344-36298465)
chr4 (45-192)||(18424232-18424378)
chr4 (295-389)||(42718574-42718669)
chr4 (40-134)||(212960-213053)
chr4 (292-381)||(23106753-23106842)
chr4 (71-217)||(2547975-2548122)
chr4 (83-217)||(17222852-17222987)
chr4 (71-193)||(896981-897103)
chr4 (48-214)||(42611799-42611966)
chr4 (45-154)||(7206578-7206687)
chr4 (40-216)||(8057017-8057194)
chr4 (71-214)||(36740915-36741059)
chr4 (45-192)||(38345776-38345922)
chr4 (71-193)||(7148783-7148905)
chr4 (48-217)||(12495572-12495744)
chr4 (40-217)||(11298573-11298740)
chr4 (292-364)||(48640764-48640836)
chr4 (299-379)||(54898895-54898975)
chr4 (71-166)||(43983362-43983457)
chr4 (137-195)||(48721897-48721955)
chr4 (48-124)||(948060-948136)
chr4 (45-124)||(3564205-3564284)
chr4 (144-214)||(8130563-8130634)
chr4 (45-124)||(43699505-43699584)
chr4 (40-91)||(46175902-46175953)
chr4 (144-217)||(14987528-14987602)
chr4 (158-214)||(30956782-30956839)
chr4 (117-217)||(31022457-31022558)
chr4 (114-214)||(35405738-35405838)
chr4 (145-217)||(42617158-42617231)
chr4 (137-217)||(47202902-47202983)
chr4 (292-364)||(10418952-10419024)
chr4 (113-193)||(22397258-22397338)
chr4 (145-193)||(24031165-24031213)
chr4 (160-215)||(34526267-34526323)
chr4 (45-192)||(43415242-43415390)
chr4 (137-220)||(46175904-46175988)
[»] chr1 (51 HSPs)
chr1 (40-220)||(9572709-9572891)
chr1 (292-381)||(19227887-19227976)
chr1 (292-389)||(33766359-33766456)
chr1 (292-389)||(51534478-51534575)
chr1 (292-380)||(4532087-4532175)
chr1 (40-220)||(46689475-46689656)
chr1 (292-372)||(34549383-34549463)
chr1 (292-372)||(45432374-45432454)
chr1 (45-193)||(46473079-46473227)
chr1 (45-217)||(13038932-13039105)
chr1 (299-375)||(33936450-33936526)
chr1 (71-217)||(26988159-26988306)
chr1 (71-217)||(28122627-28122776)
chr1 (48-193)||(4068103-4068248)
chr1 (292-389)||(13182647-13182744)
chr1 (71-220)||(36422906-36423056)
chr1 (72-216)||(15515276-15515421)
chr1 (93-217)||(37712100-37712225)
chr1 (54-193)||(35282547-35282686)
chr1 (71-217)||(37329340-37329487)
chr1 (47-193)||(51162256-51162402)
chr1 (47-195)||(12256594-12256741)
chr1 (45-192)||(26946058-26946206)
chr1 (71-214)||(48819310-48819454)
chr1 (48-214)||(10365159-10365325)
chr1 (71-217)||(16888897-16889040)
chr1 (47-154)||(49971238-49971345)
chr1 (71-193)||(6337709-6337831)
chr1 (144-212)||(10849999-10850068)
chr1 (83-193)||(12828145-12828257)
chr1 (40-193)||(25485728-25485881)
chr1 (113-193)||(36259244-36259324)
chr1 (175-217)||(1565303-1565345)
chr1 (51-217)||(35897547-35897718)
chr1 (137-217)||(15791460-15791541)
chr1 (57-193)||(26542970-26543106)
chr1 (71-191)||(3069809-3069929)
chr1 (137-220)||(19395851-19395935)
chr1 (137-193)||(50919564-50919620)
chr1 (292-367)||(26676905-26676980)
chr1 (298-365)||(31911555-31911622)
chr1 (83-217)||(41196638-41196773)
chr1 (144-217)||(5347238-5347312)
chr1 (160-194)||(10082351-10082385)
chr1 (137-217)||(3115990-3116071)
chr1 (292-369)||(28756478-28756555)
chr1 (40-88)||(9572707-9572755)
chr1 (45-193)||(20169249-20169397)
chr1 (170-217)||(28690114-28690162)
chr1 (137-220)||(42591459-42591543)
chr1 (170-217)||(47413482-47413530)
[»] chr3 (33 HSPs)
chr3 (52-220)||(32901073-32901242)
chr3 (71-217)||(43971775-43971922)
chr3 (40-217)||(3876191-3876369)
chr3 (45-220)||(33946475-33946643)
chr3 (45-213)||(34707645-34707814)
chr3 (71-215)||(43079864-43080009)
chr3 (45-217)||(51409378-51409550)
chr3 (71-217)||(40240505-40240652)
chr3 (45-217)||(22809121-22809295)
chr3 (45-209)||(40581012-40581178)
chr3 (48-188)||(53217998-53218138)
chr3 (136-220)||(36266307-36266392)
chr3 (71-217)||(585031-585177)
chr3 (144-220)||(38524172-38524249)
chr3 (299-364)||(50642392-50642457)
chr3 (45-156)||(29270346-29270457)
chr3 (137-218)||(25341347-25341429)
chr3 (71-193)||(42956132-42956254)
chr3 (71-193)||(45331248-45331370)
chr3 (156-220)||(4974407-4974472)
chr3 (47-124)||(10448761-10448838)
chr3 (137-217)||(17752059-17752140)
chr3 (137-217)||(19053379-19053460)
chr3 (113-217)||(20174868-20174973)
chr3 (144-220)||(43376779-43376856)
chr3 (299-369)||(20406403-20406473)
chr3 (147-193)||(27769736-27769782)
chr3 (113-217)||(48597794-48597900)
chr3 (292-353)||(15030106-15030167)
chr3 (100-193)||(53787705-53787798)
chr3 (75-183)||(3870189-3870297)
chr3 (146-217)||(31787608-31787680)
chr3 (144-217)||(52895333-52895407)
[»] chr5 (39 HSPs)
chr5 (292-385)||(19021396-19021489)
chr5 (292-388)||(22639563-22639659)
chr5 (292-389)||(39143220-39143317)
chr5 (71-209)||(13625456-13625596)
chr5 (49-189)||(42852011-42852150)
chr5 (71-217)||(40152804-40152951)
chr5 (292-389)||(6537080-6537176)
chr5 (45-193)||(7364262-7364410)
chr5 (71-214)||(28625491-28625635)
chr5 (71-214)||(24030226-24030369)
chr5 (51-193)||(13060555-13060697)
chr5 (100-217)||(35536885-35537002)
chr5 (45-217)||(29922117-29922290)
chr5 (137-217)||(40697083-40697164)
chr5 (72-215)||(11912032-11912176)
chr5 (299-358)||(926759-926818)
chr5 (47-189)||(43318990-43319132)
chr5 (45-192)||(2878631-2878777)
chr5 (62-193)||(17657244-17657375)
chr5 (72-154)||(1868858-1868940)
chr5 (45-123)||(22201959-22202037)
chr5 (136-197)||(11163231-11163292)
chr5 (45-130)||(17128263-17128348)
chr5 (100-193)||(28357181-28357274)
chr5 (45-220)||(1371921-1372094)
chr5 (44-124)||(10537241-10537321)
chr5 (92-192)||(41419533-41419633)
chr5 (163-217)||(6125389-6125444)
chr5 (71-217)||(6144749-6144896)
chr5 (49-124)||(11991294-11991369)
chr5 (299-366)||(22580397-22580464)
chr5 (113-191)||(38498623-38498699)
chr5 (92-217)||(40452405-40452532)
chr5 (75-217)||(41059717-41059860)
chr5 (83-189)||(23087736-23087842)
chr5 (292-365)||(26368935-26369008)
chr5 (113-193)||(27805968-27806048)
chr5 (135-217)||(41125748-41125832)
chr5 (170-217)||(42558645-42558693)
[»] chr6 (29 HSPs)
chr6 (40-214)||(6758607-6758783)
chr6 (45-220)||(23239232-23239408)
chr6 (292-372)||(12912248-12912328)
chr6 (293-381)||(24393921-24394009)
chr6 (43-217)||(29623406-29623580)
chr6 (62-216)||(32675818-32675973)
chr6 (40-219)||(2040107-2040292)
chr6 (45-213)||(21891270-21891439)
chr6 (293-372)||(165531-165610)
chr6 (45-180)||(3829885-3830020)
chr6 (299-381)||(18972621-18972703)
chr6 (71-215)||(2034159-2034304)
chr6 (45-193)||(10873971-10874117)
chr6 (44-192)||(2255718-2255866)
chr6 (113-220)||(10184255-10184363)
chr6 (292-365)||(6029356-6029429)
chr6 (163-219)||(6752915-6752972)
chr6 (71-214)||(2027107-2027251)
chr6 (92-195)||(7576812-7576915)
chr6 (144-217)||(10755211-10755285)
chr6 (137-217)||(9764319-9764400)
chr6 (71-124)||(24625862-24625915)
chr6 (144-211)||(10730142-10730210)
chr6 (47-134)||(6632646-6632733)
chr6 (175-217)||(23239232-23239275)
chr6 (160-214)||(35071359-35071414)
chr6 (292-369)||(7734077-7734153)
chr6 (45-193)||(10687292-10687443)
chr6 (40-88)||(23239362-23239410)
[»] scaffold0300 (1 HSPs)
scaffold0300 (292-388)||(9581-9677)
[»] scaffold0041 (1 HSPs)
scaffold0041 (292-372)||(94900-94980)
[»] scaffold0037 (1 HSPs)
scaffold0037 (292-372)||(997-1077)
[»] scaffold1367 (1 HSPs)
scaffold1367 (40-214)||(1038-1213)
[»] scaffold0074 (1 HSPs)
scaffold0074 (292-377)||(23809-23894)
[»] scaffold0157 (1 HSPs)
scaffold0157 (48-217)||(24733-24905)
[»] scaffold0057 (1 HSPs)
scaffold0057 (45-217)||(24317-24489)
[»] scaffold0020 (1 HSPs)
scaffold0020 (292-364)||(124190-124262)


Alignment Details
Target: chr8 (Bit Score: 323; Significance: 0; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 21 - 445
Target Start/End: Complemental strand, 45548270 - 45547841
Alignment:
Q  21 gagaaagccttttggccgattggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttat 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45548270 gagaaagccttttggccgattggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttat 45548171  T
Q  121 gaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgtaaagatatttttcataagctcaatcc 220  Q
    |||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45548170 gaaaatacaacttaggaagataaaattttcattaataaaaacttatgagttaatataaaagcttatttatttgtaaagatatttttcataagctcaatcc 45548071  T
Q  221 caatcagggcccatgtggttgtggtaaatttaannnnnnnatttgtctaccaaaaatagtttgnnnnnnnnaagaaactaaaatggattaaattactgaa 320  Q
    |||||||||||||||||||||||||||||||||       |||| |||||||||||||||||         |||||||||||||||||||||||||||||    
T  45548070 caatcagggcccatgtggttgtggtaaatttaatttttttatttttctaccaaaaatagttt-ttttttttaagaaactaaaatggattaaattactgaa 45547972  T
Q  321 aggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaacaggaataaaaaagaaagctacc------cg 414  Q
    || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||      ||    
T  45547971 agcctggagatttcagcacaaggagtgccaaaaccccagctgaaagagtcaattacaagaatgccaaaacaggaacaaaaaagaaagctaccctgttacg 45547872  T
Q  415 taaatattcccaagcatggtaaagggatatt 445  Q
    |||||||||||||||| ||||||||||||||    
T  45547871 taaatattcccaagcaaggtaaagggatatt 45547841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 168 - 390
Target Start/End: Complemental strand, 45540534 - 45540318
Alignment:
Q  168 agttaatataaaagcttatttatttgtaaagatatttttcataagctcaatcccaatcagggcccatgtggttgtggtaaatttaannnnnnnatttgtc 267  Q
    |||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||       |||| ||    
T  45540534 agttaatataaaagtttatttatttgtaaaaatatttttcataagttcaatcccaatcagggcctatgtggttgtggtaaatttaatttttttatttttc 45540435  T
Q  268 taccaaaaatagtttgnnnnnnnnaagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaaga 367  Q
    ||   ||||||||||         |||||||||||| |||||||||||||||||| |   ||||||||||||||||| ||||||||||||| || |||||    
T  45540434 tattcaaaatagttt---ttttttaagaaactaaaacggattaaattactgaaagcc---agatttcagcacaaggaatgccaaaaccccaactaaaaga 45540341  T
Q  368 gtcaattacaagaatgccaaaac 390  Q
    ||||||| ||||||||| |||||    
T  45540340 gtcaattgcaagaatgctaaaac 45540318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 168 - 248
Target Start/End: Complemental strand, 45540776 - 45540695
Alignment:
Q  168 agttaatataaaagcttatttatttgtaaagatattttt-cataagctcaatcccaatcagggcccatgtggttgtggtaaa 248  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||    
T  45540776 agttaatataaaagcttatttatttgtaaagatattttttcataagttcaatcccaatcagggcctatgtggttgtggtaaa 45540695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 45 - 192
Target Start/End: Complemental strand, 32924313 - 32924167
Alignment:
Q  45 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 144  Q
    |||||||||||||||| | || |||  |||||||| |||||||||| ||||| | ||||||||| |  ||||||||||||  ||||||||  ||||||||    
T  32924313 ttgagcttatgcaaaacagcttatgcgaataaatatgcttttatttgttatttataagcttgtttatgtagtttatgaaaaaacaacttatgaagataaa 32924214  T
Q  145 attttcgttaataaaaacttatgagttaatataaaagcttatttattt 192  Q
    |||||| ||| | ||||||||||| |||||||||||||||||||||||    
T  32924213 attttc-ttagtgaaaacttatgaattaatataaaagcttatttattt 32924167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 71 - 217
Target Start/End: Original strand, 32975698 - 32975845
Alignment:
Q  71 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 170  Q
    ||||||||| |||||||| | ||||||| |||||||| ||  ||||||||||||  ||||||||  |||||| |||||| |||  | | ||||||||| |    
T  32975698 aaataaataagcttttatatattattcataagcttgtcaaggtagtttatgaaaacacaacttatgaagatacaatttttgtttgtgagaacttatgaat 32975797  T
Q  171 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    ||||||||||||||||||||||| | ||| ||||||||||||||||||    
T  32975798 taatataaaagcttatttatttgcataagctatttttcataagctcaa 32975845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 24504154 - 24504057
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 389  Q
    |||||||||||||||||||||  ||||||||  | |||||||||||||||||| |||||||||| ||||| |||||||||||||||||  ||||||||    
T  24504154 aagaaactaaaatggattaaaaaactgaaagcatagagatttcagcacaaggaatgccaaaacctcagctaaaagagtcaattacaagtgtgccaaaa 24504057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 292 - 372
Target Start/End: Original strand, 13089766 - 13089850
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggat----tgccaaaaccccagctgaaagagtcaa 372  Q
    ||||| ||||||||||||| |||||| |||| |||||||||||||||||||||     |||||||||||||||||||||||||||    
T  13089766 aagaagctaaaatggattatattactaaaagtctggagatttcagcacaaggaaggagtgccaaaaccccagctgaaagagtcaa 13089850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 71 - 217
Target Start/End: Complemental strand, 34286638 - 34286492
Alignment:
Q  71 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 170  Q
    ||||||||| |||||||| | ||||||| |||||||| ||  |||||| |||||  ||| ||||  |||||| |||||||||||   | ||||||||| |    
T  34286638 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttgtgaaaa-acagcttatgaagatacaattttcgttagggagaacttatgaat 34286540  T
Q  171 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    ||||||||||||||||||||||| | ||  ||||||||||||||||||    
T  34286539 taatataaaagcttatttatttgcataacctatttttcataagctcaa 34286492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 292 - 388
Target Start/End: Original strand, 8444263 - 8444356
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaa 388  Q
    ||||||||||||||||||||| || |   || || ||||||||||||||| || |||||||||||||| | |||||||||||||||||| |||||||    
T  8444263 aagaaactaaaatggattaaaataat---agcctagagatttcagcacaaagagtgccaaaaccccagttaaaagagtcaattacaagagtgccaaa 8444356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 82 - 217
Target Start/End: Original strand, 38895681 - 38895817
Alignment:
Q  82 cttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaag 181  Q
    ||||||||| ||||||| |||||||||||  ||||||||||||  | || |||  |||||| ||| || |||| | ||||||||| | |||||||||||     
T  38895681 cttttatttattattcataagcttgttaaggtagtttatgaaaaaataatttatgaagatacaatatttgttagtgaaaacttataaattaatataaaaa 38895780  T
Q  182 cttatttatttgta-aagatatttttcataagctcaa 217  Q
    |||||||||||||| ||  || |||||||||||||||    
T  38895781 cttatttatttgtataaactaattttcataagctcaa 38895817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 71 - 217
Target Start/End: Complemental strand, 24350594 - 24350447
Alignment:
Q  71 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 170  Q
    |||||| || |||||||| | ||||||| |||||||| ||  || |||||||||  | | ||||  |||||| ||||||||||| ||| ||||||||| |    
T  24350594 aaataattaagcttttatatattattcataagcttgtcaacgtaatttatgaaaaaatagcttatgaagatataattttcgttagtaagaacttatgaat 24350495  T
Q  171 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    ||| |||||| |||||||||||| | ||| || |||||||||||||||    
T  24350494 taacataaaatcttatttatttgcataagctagttttcataagctcaa 24350447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 292 - 379
Target Start/End: Original strand, 24581449 - 24581536
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaag 379  Q
    ||||| |||||||| |||| |||| |||||| ||| | ||||||| | ||||| || ||||||||||||||||||| |||||||||||    
T  24581449 aagaagctaaaatgaattatattattgaaagtctgaatatttcagtataaggagtgtcaaaaccccagctgaaagaatcaattacaag 24581536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 47 - 220
Target Start/End: Original strand, 14942411 - 14942585
Alignment:
Q  47 gagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaat 146  Q
    ||||||||| |||| |||| ||| | ||||||| |||||| | | ||||| | |||||||||||  ||||||||||||  || |||||  |||||  |||    
T  14942411 gagcttatgtaaaacaacttatgtatataaataagcttttgtgtattatttataagcttgttaagttagtttatgaaaaaacgacttatgaagatgcaat 14942510  T
Q  147 tttcgttaataaaaacttatgagttaatataaaagcttatttatttg-taaagatatttttcataagctcaatcc 220  Q
    ||| ||||  || ||||||| | |||| |||||| ||||||||||||  |||| |||||| ||||||||| ||||    
T  14942511 ttttgttagcaagaacttataaattaacataaaaccttatttatttgcaaaagctattttccataagctccatcc 14942585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 114 - 211
Target Start/End: Complemental strand, 25465878 - 25465781
Alignment:
Q  114 agtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataa 211  Q
    |||||||||||  ||||||||  |||||| |||||| |||| | ||||||||||| |||| ||||||||||||||||||| | ||| ||||||||||||    
T  25465878 agtttatgaaaa-acaacttatgaagatacaatttttgttactgaaaacttatgaattaacataaaagcttatttatttgcataagctatttttcataa 25465781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 45 - 217
Target Start/End: Original strand, 32131425 - 32131598
Alignment:
Q  45 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 144  Q
    |||||||||||||||| | || ||| ||||||||| ||||||||   ||||||  ||| |||| ||  |||||||||||   ||||| ||  |||||| |    
T  32131425 ttgagcttatgcaaaacagcttatgcaaataaataagcttttatgcattattcctaagtttgtcaaggtagtttatgaataaacaacctatgaagataca 32131524  T
Q  145 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    ||||||  || | | ||||||||| |||| |||||||||||| |||||| | ||  ||||||||||||||||||    
T  32131525 attttcaatagtgagaacttatgaattaacataaaagcttatctatttgcataaactatttttcataagctcaa 32131598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 217
Target Start/End: Complemental strand, 41145473 - 41145324
Alignment:
Q  71 aaataaatacgcttttattttttatt---cacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatg 167  Q
    ||||||||| |||||||||| |||||   || ||| |||||||  ||||||||||||  |||||||  |||||||  |||||| ||| | | ||||||||    
T  41145473 aaataaataagcttttatttattattattcataagtttgttaaggtagtttatgaaaaaacaacttt-aaagatacgattttcattagtgagaacttatg 41145375  T
Q  168 agttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    | |||||||| || |||||||||||| | ||  ||||||||||||||||||    
T  41145374 aattaatatataaacttatttatttgcataaactatttttcataagctcaa 41145324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 379
Target Start/End: Original strand, 10230104 - 10230191
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaag 379  Q
    ||||||||||||| |||||||| | |||||| ||||||||||||||| ||| | || |||| |  || || |||||||||||||||||    
T  10230104 aagaaactaaaattgattaaatcaatgaaagtctggagatttcagcataagaagtgtcaaagcttcaactaaaagagtcaattacaag 10230191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 82 - 193
Target Start/End: Complemental strand, 14725029 - 14724918
Alignment:
Q  82 cttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaag 181  Q
    ||||||| | ||||| | ||| |||||||  || |||||||||  ||||||||   || || ||||||||||||||| ||||||||| |||| ||||||     
T  14725029 cttttatatattatttataagattgttaatgtaatttatgaaaaaacaacttatgtaggtataattttcgttaataagaacttatgaattaagataaaaa 14724930  T
Q  182 cttatttatttg 193  Q
    ||||||||||||    
T  14724929 cttatttatttg 14724918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 48 - 217
Target Start/End: Complemental strand, 16972455 - 16972284
Alignment:
Q  48 agcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgt-taaaatagtttatgaaagtacaacttagaaagataaaat 146  Q
    ||||||||||||| || |  || ||||||||| |||| ||| | ||||||| ||| |||| |||  ||||| ||||||  ||| ||||  |||||| |||    
T  16972455 agcttatgcaaaacaatttttgcaaataaataagcttgtatgtattattcataagtttgtctaaggtagttcatgaaaaaacagcttatgaagatacaat 16972356  T
Q  147 tttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    |||||||| | | ||||||||| | |||||||||| ||||||||||| | ||| ||||||  ||||||||||    
T  16972355 tttcgttagtgataacttatgaatcaatataaaagtttatttatttgcataagctattttgaataagctcaa 16972284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 192
Target Start/End: Complemental strand, 25333710 - 25333655
Alignment:
Q  137 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttattt 192  Q
    |||||| ||||||||||| | ||||||||||| |||| ||||||||||||||||||    
T  25333710 aagatacaattttcgttagtgaaaacttatgaattaacataaaagcttatttattt 25333655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 214
Target Start/End: Original strand, 28879069 - 28879210
Alignment:
Q  71 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaa--acttatga 168  Q
    ||||||||| |||||||| | ||||||| |||||||| ||  ||||||||||||  ||||||||  |||||     ||| |||| | |||  ||||||||    
T  28879069 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaataacaacttatgaagat-----ttttgttagtgaaagaacttatga 28879163  T
Q  169 gttaatataaaagcttatttatttgta-aagatatttttcataagct 214  Q
     |||| ||||||||||||||||||| | ||| |||||||||||||||    
T  28879164 attaacataaaagcttatttatttgcataagctatttttcataagct 28879210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 104 - 220
Target Start/End: Original strand, 2563402 - 2563519
Alignment:
Q  104 ttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatat 202  Q
    |||||||| ||||||||||||  |||||||   || ||| ||||||  ||| ||| | ||||||| |||| |||||||| || ||||||||| ||| | |    
T  2563402 ttgttaaagtagtttatgaaaaaacaacttttgaatatacaatttttattagtaagatcttatgaattaacataaaagcataattatttgtataagctct 2563501  T
Q  203 ttttcataagctcaatcc 220  Q
    ||||||||||||||||||    
T  2563502 ttttcataagctcaatcc 2563519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 24087256 - 24087321
Alignment:
Q  145 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcat 209  Q
    |||||||||||| ||||||||| | |||| ||||||||||||||||||| | ||| ||||||||||    
T  24087256 attttcgttaatgaaaacttataaattaaaataaaagcttatttatttgcataagctatttttcat 24087321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 292 - 356
Target Start/End: Original strand, 4034301 - 4034365
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccc 356  Q
    ||||| |||||||| |||| |||||| |||| ||| |||||| |||||||||| |||||||||||    
T  4034301 aagaagctaaaatgaattatattactaaaagtctgaagattttagcacaaggagtgccaaaaccc 4034365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 10298978 - 10298855
Alignment:
Q  94 attcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttg 193  Q
    ||||| |||||||| ||  ||||||||||||  ||| ||||  |||||| |||||| |||||| | ||||||||| |||| |||||||| ||| ||||||    
T  10298978 attcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaatttttgttaatgagaacttatgaattaacataaaagc-tatctatttg 10298880  T
Q  194 ta-aagatatttttcataagctcaa 217  Q
     | ||| |||| |||||||||||||    
T  10298879 cataagctattattcataagctcaa 10298855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 124
Target Start/End: Complemental strand, 26047057 - 26046978
Alignment:
Q  45 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaa 124  Q
    ||||||||||| |||| |||| ||| ||| || || |||||||||| ||||| ||||||||||| |  ||||||||||||    
T  26047057 ttgagcttatgtaaaacaacttatgcaaaaaagtaagcttttatttattattaacaagcttgttgaggtagtttatgaaa 26046978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 220
Target Start/End: Original strand, 30974043 - 30974150
Alignment:
Q  114 agtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataag 212  Q
    |||||||||||  ||||||||  ||  || ||||||||||| ||| | ||||||| |||  ||||||||||||||||||| | ||| | |||||||||||    
T  30974043 agtttatgaaaaaacaacttatgaatttacaattttcgttagtaagatcttatgaattagcataaaagcttatttatttgcataagctctttttcataag 30974142  T
Q  213 ctcaatcc 220  Q
    | ||||||    
T  30974143 cacaatcc 30974150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 220
Target Start/End: Original strand, 2669659 - 2669809
Alignment:
Q  71 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 170  Q
    ||||||||| ||| | || | ||||| | ||| |||||||  ||||||||||||  ||||||||  || ||| | ||||| ||| ||  | ||||||| |    
T  2669659 aaataaataagctctaatgtattatttataagtttgttaaggtagtttatgaaaaaacaacttatgaatatacatttttcattagtaggatcttatgaat 2669758  T
Q  171 taatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 220  Q
    ||| ||||||||||||||||||  | ||| | |||||||||||||||||||    
T  2669759 taacataaaagcttatttattttcataagctctttttcataagctcaatcc 2669809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 214
Target Start/End: Complemental strand, 9131137 - 9131059
Alignment:
Q  137 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagct 214  Q
    |||||| ||||||||||| |   ||||||||| |||| ||||||| ||||||||||| | ||| |||||||||||||||    
T  9131137 aagatacaattttcgttagtcggaacttatgaattaacataaaagtttatttatttgcataagctatttttcataagct 9131059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 10213795 - 10213853
Alignment:
Q  160 aacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    ||||||||| |||| ||| ||||||||||||||| | ||| ||||||||||||||||||    
T  10213795 aacttatgaattaacatacaagcttatttatttgcataagctatttttcataagctcaa 10213853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 11988354 - 11988308
Alignment:
Q  45 ttgagcttatgcaaaataactaatgaaaataaatacgcttttatttt 91  Q
    ||||||||||| ||||||||| ||| ||||||||| |||||||||||    
T  11988354 ttgagcttatgaaaaataacttatgtaaataaatatgcttttatttt 11988308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 365
Target Start/End: Original strand, 25582581 - 25582654
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaa 365  Q
    |||||||||||||||| || ||||||||| | ||| | ||||||||||||| | ||| ||||  ||||||||||    
T  25582581 aagaaactaaaatggaatatattactgaacgcctgaatatttcagcacaagaagtgctaaaaatccagctgaaa 25582654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 91
Target Start/End: Complemental strand, 29713334 - 29713289
Alignment:
Q  46 tgagcttatgcaaaataactaatgaaaataaatacgcttttatttt 91  Q
    |||||||||| ||||||||| ||| ||||||||| |||||||||||    
T  29713334 tgagcttatgaaaaataacttatgtaaataaataagcttttatttt 29713289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 217
Target Start/End: Original strand, 35055499 - 35055579
Alignment:
Q  137 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    |||||| ||||||||||| | | | ||||||| |||| ||||||||||||||||||  | ||| ||||||||||||||||||    
T  35055499 aagatacaattttcgttagtgagagcttatgaattaa-ataaaagcttatttatttacataagctatttttcataagctcaa 35055579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 193
Target Start/End: Complemental strand, 36907686 - 36907597
Alignment:
Q  104 ttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttg 193  Q
    |||||||  ||||||||||||  |||||||   || ||| ||||||||||| ||| | ||||||| |||  |||||||||||||||||||    
T  36907686 ttgttaaggtagtttatgaaaaaacaacttgtgaatatacaattttcgttagtaagatcttatgaattagcataaaagcttatttatttg 36907597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 217
Target Start/End: Complemental strand, 37410922 - 37410841
Alignment:
Q  137 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    |||||| ||||||||||| ||| ||||||| | |||| ||| || |||||||||||  | ||| ||||||||||||||||||    
T  37410922 aagatacaattttcgttagtaagaacttataaattaaaatataaacttatttatttacataagctatttttcataagctcaa 37410841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 217
Target Start/End: Original strand, 42102183 - 42102264
Alignment:
Q  137 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    |||||| ||||||||||||| | |  |||| | |||| ||||||||||||||||||  | ||| ||||||||||||||||||    
T  42102183 aagatacaattttcgttaatgagaggttataaattaaaataaaagcttatttatttacataagctatttttcataagctcaa 42102264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 2669811 - 2669763
Alignment:
Q  40 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttat 88  Q
    |||||||||||||||| |||| | || ||||||||||||| ||||||||    
T  2669811 ttggattgagcttatgaaaaagagcttatgaaaataaataagcttttat 2669763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 8752906 - 8752965
Alignment:
Q  160 aacttatgagttaatataaaagcttatttattt--gtaaagatatttttcataagctcaa 217  Q
    ||||||||| |||| ||||||||||||||||||   | ||| ||||||||||||||||||    
T  8752906 aacttatgaattaacataaaagcttatttatttacattaagttatttttcataagctcaa 8752965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 100 - 180
Target Start/End: Original strand, 9782223 - 9782303
Alignment:
Q  100 aagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaa 180  Q
    |||||||||||| |||||||| |||  ||||||||  || ||| ||||||||||| ||| | ||||||| |||| ||||||    
T  9782223 aagcttgttaaagtagtttattaaaaaacaacttatgaatatacaattttcgttagtaagatcttatgaattaacataaaa 9782303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 220
Target Start/End: Original strand, 19925546 - 19925718
Alignment:
Q  49 gcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattt 148  Q
    |||||| ||||| | || ||| ||||||||| ||||||| || ||||| | ||| |||||||  || |||| ||||  |||| |||  |||||| |||||    
T  19925546 gcttatacaaaacagcttatgcaaataaataagcttttaattattatttataagtttgttaaggtattttacgaaaaaacaatttatgaagatacaattt 19925645  T
Q  149 tcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 220  Q
    |||||| | | | ||||  | |||| |||||  |||||||||||  | ||| |||||||||||||||||||||    
T  19925646 tcgttagtgagagcttacaaattaaaataaatacttatttatttacataagctatttttcataagctcaatcc 19925718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 1e-42; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 45 - 220
Target Start/End: Original strand, 21788442 - 21788618
Alignment:
Q  45 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 144  Q
    ||||| |||||||||| | || ||| ||||||||| |||||||||| ||||||| ||||||||||| |||||||||||||  ||||||||  ||||||||    
T  21788442 ttgagtttatgcaaaacatcttatgcaaataaataagcttttatttattattcataagcttgttaagatagtttatgaaaaaacaacttatgaagataaa 21788541  T
Q  145 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 220  Q
    |||||||||| | | | ||||||| |||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  21788542 attttcgttagtgagagcttatgaattaatataaaagcttatttatttgcataagttatttttcataagctcaatcc 21788618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 292 - 390
Target Start/End: Original strand, 2702258 - 2702356
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaac 390  Q
    ||||||||||||||||||||| ||||||||| ||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  2702258 aagaaactaaaatggattaaaatactgaaagcctcaagatttcagcacaaggagtgccaaaaccccagctgaaagagtcaattacaagaatgccaaaac 2702356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 12410887 - 12410790
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 389  Q
    ||||||||||||||||||||| ||||||||| |||||||||||| ||||| || || ||||||||||||| |||||||||||||||||| ||||||||    
T  12410887 aagaaactaaaatggattaaaatactgaaagcctggagatttcatcacaaagagtgacaaaaccccagctaaaagagtcaattacaagagtgccaaaa 12410790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 12422947 - 12422850
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 389  Q
    ||||||||||||||||||||| ||||||||| |||||||||||| ||||| || || ||||||||||||| |||||||||||||||||| ||||||||    
T  12422947 aagaaactaaaatggattaaaatactgaaagcctggagatttcatcacaaagagtgacaaaaccccagctaaaagagtcaattacaagagtgccaaaa 12422850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 292 - 374
Target Start/End: Complemental strand, 27271740 - 27271658
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaatt 374  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||||| || |||||| |||||||||||||||||||    
T  27271740 aagaaactaaaatagattaaattactgaaagcctggagatttcagcacaaggagtgtcaaaactccagctgaaagagtcaatt 27271658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 6764520 - 6764423
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 389  Q
    ||||||||||||||||||||| |||||||||   ||||||||||||| ||||| || ||||||||||||| |||||||||||||||||| ||||||||    
T  6764520 aagaaactaaaatggattaaaatactgaaagctcggagatttcagcataaggagtgtcaaaaccccagctaaaagagtcaattacaagagtgccaaaa 6764423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 37648065 - 37647968
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 389  Q
    |||||| |||||||||||||| |||||||||  |||||||||||||||||||| |||||||||| ||||| |||||||||||||||||| || |||||    
T  37648065 aagaaattaaaatggattaaaatactgaaagtttggagatttcagcacaaggagtgccaaaacctcagctaaaagagtcaattacaagagtgtcaaaa 37647968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 292 - 381
Target Start/End: Complemental strand, 11031898 - 11031809
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaa 381  Q
    ||||| |||||||| || | |||| |||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||    
T  11031898 aagaagctaaaatgaatgatattattgaaagtctggagatttcagcataaggagtgccaaaaccccagctgaaagagtcaaatacaagaa 11031809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 299 - 379
Target Start/End: Original strand, 34394492 - 34394572
Alignment:
Q  299 taaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaag 379  Q
    ||||||| |||| ||||||||||| ||  |||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  34394492 taaaatgaattatattactgaaagcctaaagatttcaacacaaggagtgccaaaaccccagctgaaagagtcaattacaag 34394572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 113 - 214
Target Start/End: Original strand, 8832510 - 8832612
Alignment:
Q  113 tagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataa 211  Q
    ||||||||||||  |||  ||||||||||| ||||||||||| | ||||||||||| |||| ||||||||||||||||||| | ||| ||||||||||||    
T  8832510 tagtttatgaaaacacaggttagaaagatacaattttcgttagtgaaaacttatgaattaacataaaagcttatttatttgcataagctatttttcataa 8832609  T
Q  212 gct 214  Q
    |||    
T  8832610 gct 8832612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 62 - 217
Target Start/End: Original strand, 4004821 - 4004977
Alignment:
Q  62 aactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaa 161  Q
    |||| ||| |||||||||  ||||||| |  |||||| |||||| ||||| |||||||||||| |||||||||  ||| || ||||||||||| | | ||    
T  4004821 aacttatgcaaataaataatcttttatgtactattcataagctttttaaagtagtttatgaaaatacaacttatgaagctacaattttcgttagtgagaa 4004920  T
Q  162 cttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    ||||||| ||| ||||||||||| ||||| || | ||| |||||||||||| |||||    
T  4004921 cttatgaattactataaaagcttttttatctgcataagctatttttcataaactcaa 4004977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 45 - 214
Target Start/End: Original strand, 4026911 - 4027080
Alignment:
Q  45 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 144  Q
    ||||||||||||||||   || ||| ||||||||| |||||||| | |||| || |||||||| ||  ||||||||||||  ||| ||||  |||||| |    
T  4026911 ttgagcttatgcaaaactgcttatgcaaataaataagcttttatgtattat-cataagcttgtcaaggtagtttatgaaaaaacagcttatgaagataca 4027009  T
Q  145 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagct 214  Q
    ||||| |||| | | ||||||||| |||| |||| |||||||||||||| | ||| |||||||||||||||    
T  4027010 atttttgttagtgagaacttatgaattaacataatagcttatttatttgcataagctatttttcataagct 4027080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 40 - 134
Target Start/End: Complemental strand, 34913496 - 34913402
Alignment:
Q  40 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaactta 134  Q
    ||||||||||||||||||||| | || ||| ||||||||| |||||||| | ||||||| ||| ||||||| |||||||||||||  ||||||||    
T  34913496 ttggattgagcttatgcaaaacagcttatgcaaataaataagcttttatgtattattcataagtttgttaagatagtttatgaaaaaacaactta 34913402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 49 - 217
Target Start/End: Original strand, 15155802 - 15155971
Alignment:
Q  49 gcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattt 148  Q
    ||||||| |||| |||| ||||||||||||| |||||||| | ||||| | || ||||||||   |||||||||||  |||| |||  ||| || |||||    
T  15155802 gcttatgtaaaacaacttatgaaaataaatatgcttttatgtattatttataatcttgttaatgaagtttatgaaaaaacaatttaagaaggtacaattt 15155901  T
Q  149 tcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
     ||||||| | ||||||||| |||| |||||| |||||||||||  | ||| | ||||||||||||||||    
T  15155902 ccgttaatgagaacttatgaattaagataaaaacttatttattttcataagctctttttcataagctcaa 15155971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 45 - 217
Target Start/End: Complemental strand, 33321413 - 33321240
Alignment:
Q  45 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 144  Q
    |||||||||||||||| ||||  || ||||||||| |||||||| | ||||||| |||||||| ||  ||||||||||||  ||| ||||  |||||| |    
T  33321413 ttgagcttatgcaaaacaacttgtgcaaataaataagcttttatgtcttattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagataca 33321314  T
Q  145 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    ||||| |||| | | | ||| ||| |||| ||||| | ||||||||||| | ||| |||||| |||||||||||    
T  33321313 atttttgttagtgagagcttgtgaattaacataaaggtttatttatttgcataagctattttacataagctcaa 33321240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 92 - 193
Target Start/End: Original strand, 42064883 - 42064984
Alignment:
Q  92 ttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatt 191  Q
    ||||||| |||||||||||  |||||||| |||  | ||||||  ||||||  |||||||||| ||| ||||||||| ||||||||||||||||||||||    
T  42064883 ttattcataagcttgttaaggtagtttataaaaaaataacttatgaagatatcattttcgttagtaagaacttatgaattaatataaaagcttatttatt 42064982  T
Q  192 tg 193  Q
    ||    
T  42064983 tg 42064984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 83 - 217
Target Start/End: Complemental strand, 36501578 - 36501443
Alignment:
Q  83 ttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagc 182  Q
    |||||| | ||||||| |||||||| ||  ||||||||||||  ||| ||||  |||||||||||| ||||| | | |||| |||| |||| ||||||||    
T  36501578 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagataaaatttgcgttagtgagaactcatgaattaacataaaagc 36501479  T
Q  183 ttatttatttgta-aagatatttttcataagctcaa 217  Q
    ||||||||||| | ||| ||||||||| ||||||||    
T  36501478 ttatttatttgcataagctatttttcacaagctcaa 36501443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 38216096 - 38216174
Alignment:
Q  137 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagct 214  Q
    |||||| ||||||||||| | | |||||||||||||| ||||||||||||||||||| | ||| |||||||| ||||||    
T  38216096 aagatacaattttcgttagtgagaacttatgagttaacataaaagcttatttatttgcataagctatttttcgtaagct 38216174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 73 - 220
Target Start/End: Original strand, 11776997 - 11777145
Alignment:
Q  73 ataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagtta 172  Q
    ||||||| |||||||| | ||||| | |||||||||||  ||||||||||||  ||| ||||  |||||| | |||| |||| | | ||||||| |  ||    
T  11776997 ataaataagcttttatgtattatttataagcttgttaagttagtttatgaaaacacagcttatgaagatacactttttgttagtgagaacttataaacta 11777096  T
Q  173 atataaaagcttatttatttgta-aagatatttttcataagctcaatcc 220  Q
    | |||||| |||||||||||| | ||| ||||||| |||||||||||||    
T  11777097 acataaaaccttatttatttgcagaagctatttttaataagctcaatcc 11777145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 217
Target Start/End: Complemental strand, 25836787 - 25836641
Alignment:
Q  71 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 170  Q
    ||||||||| |||||||| | ||||||| |||||||| ||  ||||||||||||  ||  ||||  |||| | |||| |||||| | | |||||||||      
T  25836787 aaataaatatgcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacggcttatgaagacacaattatcgttagtgagaacttatga-a 25836689  T
Q  171 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    ||| ||||||||||||||||||| | ||| |||| |||||||||||||    
T  25836688 taacataaaagcttatttatttgcataaggtattcttcataagctcaa 25836641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 292 - 369
Target Start/End: Original strand, 7900954 - 7901031
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagt 369  Q
    ||||| |||||||| | || ||||||||||| ||| ||||||||||| ||||  |||| ||| |||||||||||||||    
T  7900954 aagaagctaaaatgaaatatattactgaaagcctgaagatttcagcataaggtgtgccgaaaacccagctgaaagagt 7901031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 48 - 193
Target Start/End: Original strand, 29774733 - 29774878
Alignment:
Q  48 agcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaatt 147  Q
    |||||||||| || |||| ||| |||||||||  |||||||   |||||||  || |||||||  ||||||||||||  ||  ||||  || ||| ||||    
T  29774733 agcttatgcataacaacttatgcaaataaataaacttttatgcattattcattagtttgttaaggtagtttatgaaaaaacggcttatgaaaatacaatt 29774832  T
Q  148 ttcgttaataaaaacttatgagttaatataaaagcttatttatttg 193  Q
    ||||||| | | ||||||||| ||||  ||||||||||||||||||    
T  29774833 ttcgttagtgagaacttatgaattaacgtaaaagcttatttatttg 29774878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 45 - 217
Target Start/End: Original strand, 37409628 - 37409801
Alignment:
Q  45 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 144  Q
    |||||| ||||||||| |||| ||| ||||||||| |||||||  | |||||| | || |||| ||  ||||||||||||  |||| |||  || ||| |    
T  37409628 ttgagcgtatgcaaaacaacttatgcaaataaataagcttttaagtattattctctagtttgtcaatgtagtttatgaaaaaacaatttatgaaaataca 37409727  T
Q  145 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    ||||| |||| | |||||||   | |||| |||||| |||| ||| ||||| ||| ||||||||||||||||||    
T  37409728 atttttgttattgaaaacttcgaaattaacataaaatcttagttacttgtataagctatttttcataagctcaa 37409801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 21788620 - 21788572
Alignment:
Q  40 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttat 88  Q
    |||||||||||||||| ||||||||| ||| ||||||||| ||||||||    
T  21788620 ttggattgagcttatgaaaaataacttatgcaaataaataagcttttat 21788572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 195
Target Start/End: Original strand, 35731203 - 35731271
Alignment:
Q  127 acaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta 195  Q
    |||||||| ||| ||||||||||| ||||| ||| ||||||| ||||  ||||| ||||||||||||||    
T  35731203 acaacttataaaaataaaattttcattaatgaaatcttatgaattaacgtaaaatcttatttatttgta 35731271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 218
Target Start/End: Complemental strand, 38471890 - 38471718
Alignment:
Q  47 gagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaat 146  Q
    |||||||||||||| | || ||| ||||||||| |||||||| | ||||  | |||||| || |  ||||||||||||  |||  |||  ||| || |||    
T  38471890 gagcttatgcaaaacagcttatgcaaataaatatgcttttatgtgttatgtataagcttcttgatgtagtttatgaaaaaacagtttatgaaggtacaat 38471791  T
Q  147 tttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaat 218  Q
    |||||||| | | ||||||||| |||| |||| |  ||||||||||||| ||| | ||||||||||| |||||    
T  38471790 tttcgttagtgagaacttatgaattaagataacaatttatttatttgtataagttctttttcataagttcaat 38471718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 124
Target Start/End: Complemental strand, 755843 - 755764
Alignment:
Q  45 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaa 124  Q
    |||||||||||||||| |||| | | |||||| || |||||||| | ||||||| ||||||||||   ||||||||||||    
T  755843 ttgagcttatgcaaaacaacttacgcaaataattaagcttttatgtattattcagaagcttgttacggtagtttatgaaa 755764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 217
Target Start/End: Complemental strand, 30382300 - 30382197
Alignment:
Q  115 gtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagc 213  Q
    ||||| ||||| |||| |||| |||||| ||||||||||| | ||| ||||| | |||| | ||||||||||||||||  | ||  ||||||||||||||    
T  30382300 gtttacgaaagaacaatttaggaagatacaattttcgttagtgaaagcttataaattaaaacaaaagcttatttatttacataatctatttttcataagc 30382201  T
Q  214 tcaa 217  Q
    ||||    
T  30382200 tcaa 30382197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 193
Target Start/End: Complemental strand, 7480918 - 7480852
Alignment:
Q  127 acaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttg 193  Q
    ||||||||| |||||| ||||||| ||| | | ||||||||| |||| |||||| ||||||||||||    
T  7480918 acaacttaggaagatacaattttcattagtcagaacttatgaattaacataaaaacttatttatttg 7480852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 220
Target Start/End: Complemental strand, 12950134 - 12950040
Alignment:
Q  127 acaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 220  Q
    ||||||||  || ||| ||||||||||| ||| | ||||||| |||| ||||||||||| ||||||| | | | | |||||||||||||||||||    
T  12950134 acaacttatgaatatagaattttcgttagtaagatcttatgaattaacataaaagcttaattatttgcatatgctctttttcataagctcaatcc 12950040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 22898359 - 22898285
Alignment:
Q  144 aattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    ||||||||||| | |||||||||   |||| ||||||||||||||||||  | ||| ||||||||||||||||||    
T  22898359 aattttcgttagtcaaaacttatagattaaaataaaagcttatttatttacataagctatttttcataagctcaa 22898285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 193
Target Start/End: Complemental strand, 23956274 - 23956217
Alignment:
Q  136 aaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttg 193  Q
    ||||||| ||||||||||||| | ||||||| | |||| |||||| ||||||||||||    
T  23956274 aaagatacaattttcgttaatgagaacttataaattaacataaaaacttatttatttg 23956217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 104 - 192
Target Start/End: Complemental strand, 16108164 - 16108076
Alignment:
Q  104 ttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttattt 192  Q
    |||||||  ||||||||||||  ||||||||  || ||| |||||| |||||| ||| ||||||| |||| ||||| ||||| ||||||    
T  16108164 ttgttaaggtagtttatgaaaaaacaacttatgaatatacaatttttgttaattaaatcttatgaattaacataaacgcttaattattt 16108076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 86; Significance: 6e-41; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 40 - 220
Target Start/End: Complemental strand, 44613579 - 44613398
Alignment:
Q  40 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaag 139  Q
    ||||||||||||||||||||| | || ||| ||||||||| |||||||||| ||||||| |||||||||||  ||||||||||||  ||||||||  | |    
T  44613579 ttggattgagcttatgcaaaacagcttatgcaaataaataagcttttatttattattcataagcttgttaaggtagtttatgaaaaaacaacttatgacg 44613480  T
Q  140 ataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 220  Q
    ||| ||||||  ||||| | ||||||||| |||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  44613479 atacaatttttattaattagaacttatgaattaatataaaagcttatttatttgcataagctatttttcataagctcaatcc 44613398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 28782015 - 28782112
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 389  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||    
T  28782015 aagaaactaaaatggattaaaatactgaaagcctggagatttcagcacaaggagtgccaaaaccccagctaaaagagtcaattacaagagtgccaaaa 28782112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 292 - 390
Target Start/End: Complemental strand, 1032320 - 1032222
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaac 390  Q
    ||||||||||| |||| |||||||||||||| ||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  1032320 aagaaactaaattggactaaattactgaaagcctggagatttcagcacagggaatgctaaaaccccagctgaaagagtcaattacaagaatgccaaaac 1032222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 9949030 - 9948933
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 389  Q
    ||||||||||||||||||||| ||||||||| ||| ||||||||||||||||| | |||||||||||||| |||||||||||||||||| ||||||||    
T  9949030 aagaaactaaaatggattaaaatactgaaagcctgaagatttcagcacaaggagtaccaaaaccccagctaaaagagtcaattacaagagtgccaaaa 9948933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 292 - 376
Target Start/End: Complemental strand, 11621464 - 11621380
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattac 376  Q
    ||||| ||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  11621464 aagaagctaaaatggattatattactgaaagcctggagatttcagcacaaggagtgccaaaaccccagctgaaagagtcaattac 11621380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 9942602 - 9942699
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 389  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||| || ||||||| || || ||| |||||||||||||| ||||||||    
T  9942602 aagaaactaaaatggattaaaatactgaaagtctggagatttcagcacaaggagtgtcaaaacctcaactaaaatagtcaattacaagagtgccaaaa 9942699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 292 - 372
Target Start/End: Original strand, 40871302 - 40871382
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaa 372  Q
    ||||| ||||||||||||| |||| | |||| ||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  40871302 aagaagctaaaatggattatattattaaaagcctggagatttcagcacaaggagtgccaaaatcccagctgaaagagtcaa 40871382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 45 - 189
Target Start/End: Complemental strand, 48021748 - 48021605
Alignment:
Q  45 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 144  Q
    |||||||||| ||||| || | ||| ||||||||| ||| |||||| ||||||| |||||||||||| ||||||||||||  | |||| |  |||||| |    
T  48021748 ttgagcttatacaaaacaatttatgcaaataaataagctcttatttattattcataagcttgttaaagtagtttatgaaa-aataactaatgaagataca 48021650  T
Q  145 attttcgttaataaaaacttatgagttaatataaaagcttattta 189  Q
    |||||| ||| | ||||||||||| |||||||||||  |||||||    
T  48021649 attttcattagtgaaaacttatgaattaatataaaaaattattta 48021605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 92 - 217
Target Start/End: Original strand, 39279461 - 39279588
Alignment:
Q  92 ttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaa-taaaaacttatgagttaatataaaagcttatttat 190  Q
    ||||||| |||||||||||  | ||||||||||   || ||||| |||||| |||||||||||| | | ||| ||||| |||| ||||||||||||||||    
T  39279461 ttattcataagcttgttaaggtggtttatgaaaaatcagcttaggaagatacaattttcgttaattgagaacctatgaattaacataaaagcttatttat 39279560  T
Q  191 ttgta-aagatatttttcataagctcaa 217  Q
    ||||| ||| ||||||||||||||||||    
T  39279561 ttgtataagctatttttcataagctcaa 39279588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 40 - 193
Target Start/End: Complemental strand, 28759946 - 28759790
Alignment:
Q  40 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaag 139  Q
    |||||||||| ||||| |||| |||| ||||||| ||| | | |||||||| ||||||| |||||||||||  |||||||| |||  | |||||| ||||    
T  28759946 ttggattgagtttatgtaaaacaacttatgaaaaaaaaaaagtttttatttattattcataagcttgttaaggtagtttataaaaaaataacttataaag 28759847  T
Q  140 ataa---aattttcgttaataaaaacttatgagttaatataaaagcttatttatttg 193  Q
    ||||   ||| || |||| ||| ||||||||| || |||||||||||||||| ||||    
T  28759846 ataatataatatttgttagtaagaacttatgaattgatataaaagcttatttgtttg 28759790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 45 - 217
Target Start/End: Complemental strand, 29390651 - 29390479
Alignment:
Q  45 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 144  Q
    ||||| ||||| |||| |||| ||| |||||||||  |||| || | ||||||| |||||||| ||  ||||||||||||  ||||||||  |||||| |    
T  29390651 ttgagtttatggaaaacaacttatgcaaataaataatctttgatgtattattcataagcttgtaaaggtagtttatgaaa-aacaacttatgaagataca 29390553  T
Q  145 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    ||||||||||   | || |||||| |||| ||||||||||||||||||| | ||  ||||||||||||||||||    
T  29390552 attttcgttagctagaatttatgaattaacataaaagcttatttatttgcataaactatttttcataagctcaa 29390479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 47 - 217
Target Start/End: Original strand, 22032749 - 22032920
Alignment:
Q  47 gagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaat 146  Q
    ||||||||| |||| |||| ||| ||||||||| | |||||| | ||||| | |||| ||||||  ||||||||||||  |||| |||  ||| || |||    
T  22032749 gagcttatgtaaaacaacttatgcaaataaatatgtttttatgtattatttataagcatgttaatgtagtttatgaaaaaacaatttatgaaggtacaat 22032848  T
Q  147 tttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    |||||||| | | ||||||| | |||| |||||| |||||||||||| | ||| | ||||||||||||||||    
T  22032849 tttcgttagtgagaacttataaattaagataaaaacttatttatttgcataagctttttttcataagctcaa 22032920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 71 - 217
Target Start/End: Original strand, 29378656 - 29378803
Alignment:
Q  71 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 170  Q
    ||||||||| |||||||| | ||||| |  || |||| ||  ||||||||||||  ||| ||||  |||||| ||||||||||| ||| ||||||||| |    
T  29378656 aaataaataagcttttatgtattatttatgagtttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttagtaagaacttatgaat 29378755  T
Q  171 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    |||  |||||||||||||||||| | ||| |||||||||||| |||||    
T  29378756 taacgtaaaagcttatttatttgcataagctatttttcataaactcaa 29378803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 100 - 220
Target Start/End: Complemental strand, 47654460 - 47654339
Alignment:
Q  100 aagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aag 198  Q
    |||||||||||  ||||||||||||  |||  |||  ||| || ||||||||||| | | ||||||||| |||| |||||| |||||||||||| | |||    
T  47654460 aagcttgttaatgtagtttatgaaaaaacagtttatgaaggtacaattttcgttagtgagaacttatgaattaagataaaaacttatttatttgcataag 47654361  T
Q  199 atatttttcataagctcaatcc 220  Q
    || |||||||||||||||||||    
T  47654360 atctttttcataagctcaatcc 47654339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 82 - 220
Target Start/End: Complemental strand, 37465951 - 37465811
Alignment:
Q  82 cttttattttttattcacaagcttgttaaaatagtttat-gaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaa 180  Q
    ||||||||| ||||||| || |||||||| ||||||||| ||||  ||||||||  |||||| ||| || |||    | ||||||||| |||||||||||    
T  37465951 cttttatttattattcataaacttgttaagatagtttatagaaaaaacaacttattaagatacaatatttgttggcgagaacttatgaattaatataaaa 37465852  T
Q  181 gcttatttatttgta-aagatatttttcataagctcaatcc 220  Q
    ||||||||||||| | ||| || ||||||||||||| ||||    
T  37465851 gcttatttatttgcataagctaattttcataagctcgatcc 37465811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 71 - 193
Target Start/End: Original strand, 47648549 - 47648670
Alignment:
Q  71 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 170  Q
    |||||||||  ||||||||| |||||||| | |||||||| |||||||||||||  ||||  ||  ||||| || ||||||||| | ||||||||||| |    
T  47648549 aaataaataaacttttatttattattcacgaacttgttaagatagtttatgaaaaaacaatctattaagat-aatttttcgttagtgaaaacttatgaat 47648647  T
Q  171 taatataaaagcttatttatttg 193  Q
    ||||||||||   ||||||||||    
T  47648648 taatataaaaatatatttatttg 47648670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 45 - 217
Target Start/End: Original strand, 38372543 - 38372716
Alignment:
Q  45 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 144  Q
    |||||||||||||||| | || ||| ||||||||| ||| |||| | ||||||| ||| |||| ||  ||||||| ||||   || || |  |||| | |    
T  38372543 ttgagcttatgcaaaacagcttatgcaaataaataagctcttatgtattattcataagtttgtcaaggtagtttacgaaaaagcagctcaagaagaaaca 38372642  T
Q  145 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    |||||||||| | | ||||||||| |||| ||||||||| ||||||||| |  || ||||||||||||||||||    
T  38372643 attttcgttagtgagaacttatgaattaacataaaagctgatttatttgcattagctatttttcataagctcaa 38372716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 81 - 193
Target Start/End: Complemental strand, 14691364 - 14691252
Alignment:
Q  81 gcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaa 180  Q
    |||||||| | ||||||| |||||||| ||  || |||||||||  |||| |||  |||||| ||||||||||| | | ||||||||| |||| ||||||    
T  14691364 gcttttatgtattattcataagcttgtcaatgtaatttatgaaaaaacaatttatgaagatataattttcgttagtgagaacttatgaattaacataaaa 14691265  T
Q  181 gcttatttatttg 193  Q
    | |||||||||||    
T  14691264 ggttatttatttg 14691252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 47 - 214
Target Start/End: Original strand, 22575573 - 22575741
Alignment:
Q  47 gagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaat 146  Q
    ||||||||| |||| | || ||| ||||||||||| |||||| | ||||| | ||| ||||||| ||| |||||||||  |||  |||  |||||| |||    
T  22575573 gagcttatgtaaaacatcttatgcaaataaatacgtttttatgtattatttataagtttgttaagatattttatgaaaaaacagtttatgaagatacaat 22575672  T
Q  147 tttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagct 214  Q
    |||||||| ||| | ||||| | |||| |||||| ||||||||| |  | ||| |||||||||||||||    
T  22575673 tttcgttagtaagagcttataaattaaaataaaaacttatttatctacataagctatttttcataagct 22575741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 33204934 - 33204989
Alignment:
Q  160 aacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagct 214  Q
    ||||||||| |||| ||||||||||||||||||| | |||||||||||||||||||    
T  33204934 aacttatgaattaacataaaagcttatttatttgcataagatatttttcataagct 33204989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 372
Target Start/End: Original strand, 12622906 - 12622984
Alignment:
Q  294 gaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaa 372  Q
    ||||||||||||||||| ||||||||||| |||||||||| |||| || || || |||||| |||  ||| ||||||||    
T  12622906 gaaactaaaatggattatattactgaaagcctggagattttagcataaagagtgtcaaaactccaattgatagagtcaa 12622984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 137 - 217
Target Start/End: Complemental strand, 16932939 - 16932858
Alignment:
Q  137 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    |||||| ||||||||||| ||||| ||||| | |||| |||||||||||||||| |  | ||| ||||||||||||||||||    
T  16932939 aagatacaattttcgttagtaaaagcttataaattaaaataaaagcttatttatatacataagctatttttcataagctcaa 16932858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 137 - 217
Target Start/End: Complemental strand, 16938322 - 16938241
Alignment:
Q  137 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    |||||| ||||||||||| ||||| ||||| | |||| |||||||||||||||| |  | ||| ||||||||||||||||||    
T  16938322 aagatacaattttcgttagtaaaagcttataaattaaaataaaagcttatttatatacataagctatttttcataagctcaa 16938241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 137 - 217
Target Start/End: Original strand, 16958892 - 16958973
Alignment:
Q  137 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    |||||| ||||||||||| ||||| ||||| | |||| |||||||||||||||| |  | ||| ||||||||||||||||||    
T  16958892 aagatacaattttcgttagtaaaagcttataaattaaaataaaagcttatttatatacataagctatttttcataagctcaa 16958973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 137 - 217
Target Start/End: Complemental strand, 33288084 - 33288003
Alignment:
Q  137 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    |||||| | ||||||||| | ||||||||||| |||| |||||| |||||||||||| | ||| || |||||||||||||||    
T  33288084 aagatacagttttcgttagtgaaaacttatgaattaacataaaaacttatttatttggataagctagttttcataagctcaa 33288003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 379
Target Start/End: Original strand, 17193893 - 17193972
Alignment:
Q  299 taaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaag 379  Q
    ||||||| |||||| ||||||||| | ||||||||||| | ||||| || | ||| ||||||||||| |||||||||||||    
T  17193893 taaaatgtattaaaatactgaaagccgggagatttcagtataaggagtgtc-aaatcccagctgaaacagtcaattacaag 17193972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 299 - 369
Target Start/End: Complemental strand, 15669787 - 15669718
Alignment:
Q  299 taaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagt 369  Q
    ||||||||| || ||||||||| | ||||| ||||||||| ||| | ||| ||||||||||||||||||||    
T  15669787 taaaatggaatatattactgaa-gcctggaaatttcagcataagaagtgcaaaaaccccagctgaaagagt 15669718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 217
Target Start/End: Original strand, 34922926 - 34923091
Alignment:
Q  55 gcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagta--caacttagaaagataaaattttcgt 152  Q
    |||||| |||| ||| ||||||||| |||||||| | ||||||| ||| |||| ||  |||||||| |||  |  || |||   |||||| | |||||||    
T  34922926 gcaaaacaacttatgcaaataaataagcttttatgtattattcataagtttgtcaaggtagtttataaaaaaaaacagcttgtgaagatacacttttcgt 34923025  T
Q  153 taataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    || | | |||||||||  ||| ||||||||||||||||||| | ||| ||||||| ||||||||||    
T  34923026 tagtgagaacttatgaactaacataaaagcttatttatttgcataagctattttttataagctcaa 34923091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 220
Target Start/End: Original strand, 35809101 - 35809251
Alignment:
Q  71 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 170  Q
    ||||||||| || || || | ||||| | |||||||||||  ||||||||||||  ||||||||  || ||| ||||||||  | ||| |  |||||| |    
T  35809101 aaataaataagcattaatgtattatttataagcttgttaacgtagtttatgaaaaaacaacttaagaatatacaattttcgccagtaagattttatgaat 35809200  T
Q  171 taatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 220  Q
    ||| ||||||||||| ||||||  | ||| | |||||||||||||||||||    
T  35809201 taacataaaagcttaattatttacataagctctttttcataagctcaatcc 35809251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 193
Target Start/End: Complemental strand, 8180653 - 8180544
Alignment:
Q  84 tttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagct 183  Q
    ||||||| ||||| | |||||||||||  |||||||| |||    |||||| ||| ||| ||| ||  ||| | ||||||||||| |||||||||||| |    
T  8180653 tttatttattatttataagcttgttaaggtagtttataaaaaattaacttataaaaatataatatttattagtgaaaacttatgaattaatataaaagtt 8180554  T
Q  184 tatttatttg 193  Q
    ||||||||||    
T  8180553 tatttatttg 8180544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 369
Target Start/End: Original strand, 18299447 - 18299523
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagt 369  Q
    ||||| |||||||||| || ||||||||| | ||||| | ||||||||||| | ||| ||||||||| ||||||||||    
T  18299447 aagaagctaaaatggaatatattactgaa-gcctggaaagttcagcacaagaagtgcaaaaaccccatctgaaagagt 18299523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 369
Target Start/End: Complemental strand, 29627029 - 29626953
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagt 369  Q
    ||||| |||||||||| || | ||||||| | ||||| |||| |||||||| | ||| ||||||||||||||||||||    
T  29627029 aagaagctaaaatggagtataatactgaa-gcctggaaattttagcacaagaagtgcaaaaaccccagctgaaagagt 29626953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 218
Target Start/End: Original strand, 43391717 - 43391880
Alignment:
Q  56 caaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaa 155  Q
    ||||| |||| ||| |||||||||  ||| | ||| ||||||| ||| |||||||  ||||||||||||  | || |||  |||||| |||||| |||      
T  43391717 caaaacaacttatgtaaataaataaacttatgtttattattcataagtttgttaaggtagtttatgaaaaaataatttatgaagatataatttttgtttg 43391816  T
Q  156 taaaaacttatgagttaatataaaagcttatttattt--gtaaagatatttttcataagctcaat 218  Q
    | ||||||||| | | ||||||||| |||||||||||  |||||  |||||||||||| ||||||    
T  43391817 tgaaaacttataaataaatataaaaacttatttatttacgtaaa-ctatttttcataaactcaat 43391880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 43818864 - 43818803
Alignment:
Q  160 aacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 220  Q
    ||||||||| |||| |||||| |||||||||||| | ||| | |||||||||||||||||||    
T  43818864 aacttatgaattaagataaaaacttatttatttgcataagctctttttcataagctcaatcc 43818803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 217
Target Start/End: Original strand, 20888584 - 20888732
Alignment:
Q  71 aaataaatacgctttt-attttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgag 169  Q
    ||||||||| |||||| || | ||||||| |||||||  ||  ||||||||||||  |||| |||  |||||| ||||||| |   | ||||||||| |     
T  20888584 aaataaataagctttttatgtattattcataagcttgcaaaggtagtttatgaaaaaacaatttatgaagatacaattttcttccgtgaaaacttataaa 20888683  T
Q  170 ttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    |||| |||||| |||| ||||||| | ||| ||||||||||||||||||    
T  20888684 ttaacataaaaacttacttatttgcataagttatttttcataagctcaa 20888732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 22515608 - 22515564
Alignment:
Q  45 ttgagcttatgcaaaataactaatgaaaataaatacgcttttatt 89  Q
    ||||||||||||||||||  | ||||||||||||| |||||||||    
T  22515608 ttgagcttatgcaaaatatattatgaaaataaataagcttttatt 22515564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 44613396 - 44613444
Alignment:
Q  40 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttat 88  Q
    |||||||||||||||| |||||| || ||| ||||||||| ||||||||    
T  44613396 ttggattgagcttatgaaaaatagcttatgcaaataaataagcttttat 44613444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 9e-34; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 40 - 220
Target Start/End: Original strand, 41228883 - 41229064
Alignment:
Q  40 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaag 139  Q
    ||||||||||||||||||||| | || ||| |  |||||| |||||||||| ||||||| |||||||||||  ||||||||||||  |||||| |  |||    
T  41228883 ttggattgagcttatgcaaaacagcttatgcaggtaaataggcttttatttattattcataagcttgttaaggtagtttatgaaaaaacaactgatgaag 41228982  T
Q  140 ataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 220  Q
    ||| ||||||| ||| | | ||||||||| |||||||||||||| ||||||||| | ||| |||||||||||||||||||||    
T  41228983 atacaattttcattagttagaacttatgaattaatataaaagctaatttatttgcataagctatttttcataagctcaatcc 41229064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 43499397 - 43499300
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 389  Q
    ||||||||||||||||||||| |||||||||  |||||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||    
T  43499397 aagaaactaaaatggattaaaatactgaaagcttggagatttcagcacaaggagtgccaaaaccccagctaaaagagtcaattacaagagtgccaaaa 43499300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 292 - 390
Target Start/End: Original strand, 39059723 - 39059821
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaac 390  Q
    ||||||||||||||||||||||||||||||| ||| ||| ||||||||||| | ||||||||||| |||||||||||| ||||||||||||| ||||||    
T  39059723 aagaaactaaaatggattaaattactgaaagtctgaagaattcagcacaagcagtgccaaaacccaagctgaaagagttaattacaagaatgtcaaaac 39059821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 295 - 372
Target Start/End: Original strand, 37870649 - 37870726
Alignment:
Q  295 aaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaa 372  Q
    |||||||||||||||| |||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  37870649 aaactaaaatggattatattactcaaagtctggagatttcagcacaaggagtgccaaaaccccagctgaaagagtcaa 37870726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 293 - 388
Target Start/End: Original strand, 36651742 - 36651837
Alignment:
Q  293 agaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaa 388  Q
    |||||||||||||||||||| ||  |||||  |||||||||||||||||||| |||||||||||||||| ||||||||| |||||||| |||||||    
T  36651742 agaaactaaaatggattaaaatatcgaaagtttggagatttcagcacaaggagtgccaaaaccccagctaaaagagtcagttacaagagtgccaaa 36651837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 40 - 214
Target Start/End: Complemental strand, 46704375 - 46704201
Alignment:
Q  40 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaag 139  Q
    |||||||||||||||| |||| |||| ||| |||||| || |||||||||| |||||||  ||||||||||  ||||||||||||  ||| ||||  |||    
T  46704375 ttggattgagcttatgtaaaacaacttatgcaaataa-taagcttttatttattattcatgagcttgttaaggtagtttatgaaaaaacagcttatgaag 46704277  T
Q  140 ataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagct 214  Q
    ||||||||||| ||| | | ||||||||| |||||||||||  ||| ||||||| | ||| |||||||||||||||    
T  46704276 ataaaattttcattagtgagaacttatgaattaatataaaaagttacttatttgcataagttatttttcataagct 46704201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 292 - 390
Target Start/End: Original strand, 9896508 - 9896606
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaac 390  Q
    ||||||||||||||||| |||||| ||||||  |||| |||| |||||||||| |||||||||||||| ||||| |||||||| |||||||||||||||    
T  9896508 aagaaactaaaatggataaaattagtgaaagcttggaaatttaagcacaaggagtgccaaaaccccagatgaaaaagtcaattgcaagaatgccaaaac 9896606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 81 - 217
Target Start/End: Complemental strand, 18630960 - 18630823
Alignment:
Q  81 gcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaa 180  Q
    |||||||||| |||| ||  ||||||||||  ||||||||||||  ||| ||||  |||||||| ||||||||| | | ||||||||| |||||||||||    
T  18630960 gcttttatttattatccatgagcttgttaaggtagtttatgaaaaaacagcttatgaagataaagttttcgttagtgagaacttatgaattaatataaaa 18630861  T
Q  181 gcttatttatttgta-aagatatttttcataagctcaa 217  Q
    ||||||||||||| | ||| ||||||||||||||||||    
T  18630860 gcttatttatttgcataagctatttttcataagctcaa 18630823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 45 - 212
Target Start/End: Original strand, 29877624 - 29877792
Alignment:
Q  45 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 144  Q
    |||||||||||||||| || | ||| ||||||||| |||||||| | ||||||| ||||||| |||  ||||||||||||   || ||||  |||||| |    
T  29877624 ttgagcttatgcaaaacaatttatgcaaataaataagcttttatgtattattcataagcttgctaaggtagtttatgaaaaagcagcttatgaagataca 29877723  T
Q  145 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataag 212  Q
    ||||| |||| | | ||||||||| |||| |||||||||||| |||||| | ||| |||||||||||||    
T  29877724 atttttgttagtgagaacttatgaattaacataaaagcttatatatttgcataagctatttttcataag 29877792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 45 - 217
Target Start/End: Original strand, 23297423 - 23297593
Alignment:
Q  45 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 144  Q
    |||||||||||||||||| || ||| ||||||||| |||||||| | ||||||| ||| |||| ||  |||||||||||   ||| ||||  |||||| |    
T  23297423 ttgagcttatgcaaaatagcttatgcaaataaataagcttttatgtattattcataagtttgtcaaggtagtttatgaa---acagcttatgaagataca 23297519  T
Q  145 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    ||||| ||||   | ||||||||| |||  ||||||||||||||||||| | ||| ||||||||||||||||||    
T  23297520 atttttgttagcgagaacttatgaattagcataaaagcttatttatttgcataagctatttttcataagctcaa 23297593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 71 - 217
Target Start/End: Complemental strand, 48591499 - 48591352
Alignment:
Q  71 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 170  Q
    ||||||||| | |||||| | ||||||| | |||||| ||  ||||||||||||  ||| ||||  |||||| ||||||||||||| | ||||||||| |    
T  48591499 aaataaataagtttttatatattattcatacgcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttaatgagaacttatgaat 48591400  T
Q  171 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    |||  |||||||||||||||||| | ||| ||||||||||||||||||    
T  48591399 taacgtaaaagcttatttatttgcataagctatttttcataagctcaa 48591352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 295 - 389
Target Start/End: Complemental strand, 7743669 - 7743575
Alignment:
Q  295 aaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 389  Q
    ||||||||||||||||||  ||||||||  |||||||||||||||||||| |||||||||   |||| |||||||||||||||||| || |||||    
T  7743669 aaactaaaatggattaaaaaactgaaagcatggagatttcagcacaaggagtgccaaaacttaagctaaaagagtcaattacaagagtgtcaaaa 7743575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 73 - 193
Target Start/End: Original strand, 36298344 - 36298465
Alignment:
Q  73 ataaatacgcttttattttttattcacaagcttgttaaaatagtttatg-aaagtacaacttagaaagataaaattttcgttaataaaaacttatgagtt 171  Q
    ||||||| |||||||||| ||||| | ||  |||||||||||||||||| |||  |||| |||  |||||||| |||| |||||| ||||||||||| ||    
T  36298344 ataaatatgcttttatttgttatttataactttgttaaaatagtttatggaaaaaacaatttatgaagataaattttttgttaatgaaaacttatgaatt 36298443  T
Q  172 aatataaaagcttatttatttg 193  Q
    |||||||||| |||||||||||    
T  36298444 aatataaaagtttatttatttg 36298465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 45 - 192
Target Start/End: Complemental strand, 18424378 - 18424232
Alignment:
Q  45 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 144  Q
    |||||||||||||||| || | ||  ||||||||| |||||||| | ||||||| || ||||| ||  ||||||||||||  |||| |||  |||||| |    
T  18424378 ttgagcttatgcaaaacaatttatacaaataaataagcttttatgtattattcataaacttgtgaaggtagtttatgaaaa-acaatttatgaagataca 18424280  T
Q  145 attttcgttaataaaaacttatgagttaatataaaagcttatttattt 192  Q
    ||||| |||| | ||||||||||| |||| ||||||||||||||||||    
T  18424279 atttttgttattgaaaacttatgaattaacataaaagcttatttattt 18424232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 295 - 389
Target Start/End: Complemental strand, 42718669 - 42718574
Alignment:
Q  295 aaactaaaatggattaaattactgaaaggctggagatttcagca-caaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 389  Q
    ||||||||||||||||||  |||||||| ||||||||||||||| |||||| ||| |||||||| ||| ||||||| ||||| |||| ||||||||    
T  42718669 aaactaaaatggattaaaaaactgaaagcctggagatttcagcaccaaggagtgctaaaaccccggctaaaagagttaattataagagtgccaaaa 42718574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 40 - 134
Target Start/End: Complemental strand, 213053 - 212960
Alignment:
Q  40 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaactta 134  Q
    ||||||||||||||||||||| |||| ||| ||||||||| | |||||||| ||||||| |||||||||||  ||||||||||||  ||||||||    
T  213053 ttggattgagcttatgcaaaacaacttatgcaaataaataag-ttttatttattattcataagcttgttaaggtagtttatgaaaaaacaactta 212960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 292 - 381
Target Start/End: Original strand, 23106753 - 23106842
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaa 381  Q
    ||||| |||||||  |||| |||||||||||  |||||||||||||| ||||| |||||||||||||  |||||||||||| ||||||||    
T  23106753 aagaagctaaaataaattatattactgaaagtatggagatttcagcataaggagtgccaaaaccccatttgaaagagtcaaatacaagaa 23106842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 71 - 217
Target Start/End: Complemental strand, 2548122 - 2547975
Alignment:
Q  71 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 170  Q
    ||||||||| | |||||||| |||||||  ||| | ||||  ||||||||||||  |||| |||  ||||||||||||||| |||| | ||||||| | |    
T  2548122 aaataaataagtttttatttgttattcatgagcctattaagttagtttatgaaaaaacaatttatgaagataaaattttcgctaatgagaacttataaat 2548023  T
Q  171 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    |||||||||| |||||||||||| | ||| | ||| ||||||||||||    
T  2548022 taatataaaaacttatttatttgcataagctctttctcataagctcaa 2547975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 83 - 217
Target Start/End: Original strand, 17222852 - 17222987
Alignment:
Q  83 ttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagc 182  Q
    |||||| | ||||||| |||||||| ||  ||||||||||||  |||  |||  |||||| ||||||||||| | | ||||||||| |||| |||||| |    
T  17222852 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagattatgaagatacaattttcgttagttagaacttatgaattaacataaaaac 17222951  T
Q  183 ttatttatttgta-aagatatttttcataagctcaa 217  Q
    ||||||||||| | ||| ||||||||||||||||||    
T  17222952 ttatttatttgaataagctatttttcataagctcaa 17222987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 71 - 193
Target Start/End: Original strand, 896981 - 897103
Alignment:
Q  71 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 170  Q
    |||||||||  ||||||| | ||||||| |||||||| ||  ||||||||||||  |||| |||   |||||  |||||||||| | ||||||||| | |    
T  896981 aaataaataaacttttatgtattattcataagcttgtcaatgtagtttatgaaaaaacaatttacgtagatacgattttcgttagtgaaaacttataaat 897080  T
Q  171 taatataaaagcttatttatttg 193  Q
    |||||||||||||||||||||||    
T  897081 taatataaaagcttatttatttg 897103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 48 - 214
Target Start/End: Complemental strand, 42611966 - 42611799
Alignment:
Q  48 agcttatgcaaaataactaatgaaaataaatacgcttt-tattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaat 146  Q
    ||||||||||||| |||| ||| ||||||||| ||||| ||| | ||||||| ||||||||  |  ||||||||||||  ||||||||  |||||| | |    
T  42611966 agcttatgcaaaacaacttatgcaaataaataagctttatatgtattattcataagcttgtcgag-tagtttatgaaaaaacaacttatgaagatacagt 42611868  T
Q  147 tttcgttaataaaaacttatgagttaatataaaagcttatttatttg--taaagatatttttcataagct 214  Q
    |||||| | | | ||||||||| |||| |||||||||||||||||||  ||||  |||||||||||||||    
T  42611867 tttcgt-agtgacaacttatgaattaacataaaagcttatttatttgcataaatctatttttcataagct 42611799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 45 - 154
Target Start/End: Complemental strand, 7206687 - 7206578
Alignment:
Q  45 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 144  Q
    ||||||||||||| || | || ||| |||| |||| |||||||||| |||||||| ||| ||||||  ||||||||||||  ||||||||  ||||||||    
T  7206687 ttgagcttatgcagaacagcttatgcaaatgaataagcttttatttattattcacgagcctgttaaggtagtttatgaaaaaacaacttatgaagataaa 7206588  T
Q  145 attttcgtta 154  Q
     |||||||||    
T  7206587 gttttcgtta 7206578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 40 - 216
Target Start/End: Complemental strand, 8057194 - 8057017
Alignment:
Q  40 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaag 139  Q
    |||||||||||||||| ||||||||||||| ||| ||||| | |||||||| ||||||| |||||||| ||  ||| ||| ||||  || | |||  |||    
T  8057194 ttggattgagcttatgaaaaataactaatgcaaaaaaataagtttttatttattattcataagcttgtcaaggtagcttaagaaaaaacgatttatgaag 8057095  T
Q  140 ataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgtaaaga-tatttttcataagctca 216  Q
    ||| ||| || |||  | | ||||||| | ||||||||||| ||||||| |||| | ||| || ||||||||||||||    
T  8057094 atacaatatttgttcgtgagaacttataaattaatataaaaacttatttgtttggatagactaattttcataagctca 8057017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 71 - 214
Target Start/End: Original strand, 36740915 - 36741059
Alignment:
Q  71 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 170  Q
    ||||||||| |||||||| | |||| || |||||||| ||| |||||||||||| ||||  | |  |||||| ||||||| ||| | | ||||||||| |    
T  36740915 aaataaataagcttttatatattatgcataagcttgtcaaagtagtttatgaaaatacagttcatgaagatacaattttcattagtgagaacttatgaat 36741014  T
Q  171 taatataaaagcttatttatttgta-aagatatttttcataagct 214  Q
     || | ||||||||||||||||| | ||| |||||||||||||||    
T  36741015 caacacaaaagcttatttatttgcataagctatttttcataagct 36741059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 45 - 192
Target Start/End: Complemental strand, 38345922 - 38345776
Alignment:
Q  45 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 144  Q
    |||||||||||||||| | || ||  ||||||||| |||||||| |  |||||| ||| |||| ||| ||||||||||||  ||||||||  |||||| |    
T  38345922 ttgagcttatgcaaaacagcttatccaaataaataagcttttatgtagtattcataag-ttgtcaaagtagtttatgaaaaaacaacttatgaagataca 38345824  T
Q  145 attttcgttaataaaaacttatgagttaatataaaagcttatttattt 192  Q
    |||||  |||   | ||||||||| |||| ||||||||||||||||||    
T  38345823 atttttattagccagaacttatgaattaacataaaagcttatttattt 38345776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 71 - 193
Target Start/End: Original strand, 7148783 - 7148905
Alignment:
Q  71 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 170  Q
    ||||||||| |||||||| | ||||||| |||||||| ||  |||||| |||||  ||| |||| ||| ||| ||||||| ||| | | ||||||||| |    
T  7148783 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttttgaaaaaacagcttataaaaatacaattttctttagtcagaacttatgaat 7148882  T
Q  171 taatataaaagcttatttatttg 193  Q
    ||  |||||||||||||||||||    
T  7148883 tagcataaaagcttatttatttg 7148905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 48 - 217
Target Start/End: Complemental strand, 12495744 - 12495572
Alignment:
Q  48 agcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaa--tagtttatgaaagtacaacttagaaagataaaa 145  Q
    |||||| |||||| | || ||| ||||||||| |||||||| | ||||||| |||||||| ||||  ||||||||||||  ||| || |  |||||| ||    
T  12495744 agcttaagcaaaacagcttatgcaaataaataagcttttatgtattattcataagcttgtcaaaaggtagtttatgaaaaaacagctaatcaagatacaa 12495645  T
Q  146 ttttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    | ||| ||| | | ||||||| | |||| |||||| |||||||||||| | ||| || |||||||||||||||    
T  12495644 tattcattagtgagaacttataaattaacataaaaacttatttatttgcataagctacttttcataagctcaa 12495572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 217
Target Start/End: Original strand, 11298573 - 11298740
Alignment:
Q  40 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaag 139  Q
    ||||||||||||||||||||| | || ||| || ||| || |||||||||| |||||||  ||||| ||||  ||||||||||| |           |||    
T  11298573 ttggattgagcttatgcaaaacagcttatgcaagtaattaagcttttatttattattcatgagcttcttaaggtagtttatgaatg-----------aag 11298661  T
Q  140 ataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    ||||| ||||||||| | | |||||| || ||| |||||||| ||||||||||| | ||| ||||||||||||||||||    
T  11298662 ataaagttttcgttagtgagaacttaagaattattataaaagtttatttatttgcataagctatttttcataagctcaa 11298740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 292 - 364
Target Start/End: Complemental strand, 48640836 - 48640764
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaa 364  Q
    |||||||||||||||| || ||||||||| | ||| ||||||||||||||||| ||| |||| ||||| ||||    
T  48640836 aagaaactaaaatggaatatattactgaacgcctgaagatttcagcacaaggagtgctaaaaacccagttgaa 48640764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 299 - 379
Target Start/End: Original strand, 54898895 - 54898975
Alignment:
Q  299 taaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaag 379  Q
    ||||||| | || |||||||||||  ||||||||| || | ||||| || ||||||| |||||||||||||||||||||||    
T  54898895 taaaatgaaatatattactgaaagtttggagattttagtataaggagtgtcaaaacctcagctgaaagagtcaattacaag 54898975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 166
Target Start/End: Complemental strand, 43983457 - 43983362
Alignment:
Q  71 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttat 166  Q
    ||||||||| || || || | ||||| | ||||||||||| ||||||||| |||  |||||||| ||| ||| ||||||||||||||||| |||||    
T  43983457 aaataaataagcattaatgtattatttataagcttgttaagatagtttataaaaaaacaacttataaacatacaattttcgttaataaaatcttat 43983362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 137 - 195
Target Start/End: Original strand, 48721897 - 48721955
Alignment:
Q  137 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta 195  Q
    |||||| |||||| |||| | | ||||||||| ||||||||||||||||||||||||||    
T  48721897 aagatataatttttgttagtgagaacttatgaattaatataaaagcttatttatttgta 48721955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 124
Target Start/End: Original strand, 948060 - 948136
Alignment:
Q  48 agcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaa 124  Q
    ||||||||||||||| || ||||||||||||| |||||||| | ||||||| ||  |||| ||  ||||||||||||    
T  948060 agcttatgcaaaatagcttatgaaaataaataagcttttatgtattattcataactttgtcaaggtagtttatgaaa 948136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 124
Target Start/End: Original strand, 3564205 - 3564284
Alignment:
Q  45 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaa 124  Q
    |||||||||||||||| | || |||||||||||||  ||||||| | ||||||| ||| |||| ||  ||||||||||||    
T  3564205 ttgagcttatgcaaaacagcttatgaaaataaataaacttttatatattattcataagtttgtcaaggtagtttatgaaa 3564284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 214
Target Start/End: Original strand, 8130563 - 8130634
Alignment:
Q  144 aattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagct 214  Q
    |||||| |||| | ||||||||||| |||| |||||| |||||||||||| | ||| |||||||||||||||    
T  8130563 aatttttgttagtgaaaacttatgaattaacataaaaacttatttatttgcacaagctatttttcataagct 8130634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 124
Target Start/End: Complemental strand, 43699584 - 43699505
Alignment:
Q  45 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaa 124  Q
    ||||||||||| |||| |||| ||  ||||||||| |||||||| | ||||||| |||||||| ||  ||||||||||||    
T  43699584 ttgagcttatgaaaaacaacttatacaaataaataagcttttatgtcttattcataagcttgtcaatgtagtttatgaaa 43699505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 46175902 - 46175953
Alignment:
Q  40 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttatttt 91  Q
    |||||||||||||||| ||||||||| ||| ||||||||| || ||||||||    
T  46175902 ttggattgagcttatgaaaaataacttatgtaaataaataagcatttatttt 46175953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 14987602 - 14987528
Alignment:
Q  144 aattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    ||||||||||| | | ||||||||| ||||||||||| ||||||||||| || ||| | |||||||||| |||||    
T  14987602 aattttcgttagtgagaacttatgaattaatataaaaacttatttatttatataagctgtttttcataaactcaa 14987528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 214
Target Start/End: Original strand, 30956782 - 30956839
Alignment:
Q  158 aaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagct 214  Q
    ||||||||||| ||||| ||||| |||||||||||| | ||| |||||||||||||||    
T  30956782 aaaacttatgaattaatgtaaaaacttatttatttgcataagctatttttcataagct 30956839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 117 - 217
Target Start/End: Original strand, 31022457 - 31022558
Alignment:
Q  117 ttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctc 215  Q
    ||||||||  ||| |||| ||||||| ||||||||| | | ||||||||||| ||||  |||| ||||||||||||| | ||| | |||||||||| |||    
T  31022457 ttatgaaaaaacagcttataaagatacaattttcgtcagtgaaaacttatgaattaaggtaaatgcttatttatttgcataagttgtttttcataatctc 31022556  T
Q  216 aa 217  Q
    ||    
T  31022557 aa 31022558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 114 - 214
Target Start/End: Original strand, 35405738 - 35405838
Alignment:
Q  114 agtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataag 212  Q
    |||||||||||  ||| ||||  |||||| ||||||||||| ||| | || || | |||| ||||||||||||||||||| | ||| |||||||||||||    
T  35405738 agtttatgaaaaaacagcttatgaagatagaattttcgttagtaagacct-attaattaacataaaagcttatttatttgcataagctatttttcataag 35405836  T
Q  213 ct 214  Q
    ||    
T  35405837 ct 35405838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 217
Target Start/End: Complemental strand, 42617231 - 42617158
Alignment:
Q  145 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    |||||||||| | ||||||||| | |||| |||||| |||||||||||  | ||| ||||||||||||||||||    
T  42617231 attttcgttagtgaaaacttataaattaaaataaaaacttatttatttacataagctatttttcataagctcaa 42617158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 217
Target Start/End: Original strand, 47202902 - 47202983
Alignment:
Q  137 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    |||||| ||||||||||| | | | ||||| | |||| ||||||||||| |||||| || ||| ||||||||||||||||||    
T  47202902 aagatacaattttcgttagtgagatcttataaattaaaataaaagcttacttatttatataagttatttttcataagctcaa 47202983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 364
Target Start/End: Original strand, 10418952 - 10419024
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaa 364  Q
    ||||| |||||||||| || ||||||||| | ||| | ||||||||||||| | ||| |||| ||||||||||    
T  10418952 aagaagctaaaatggaatatattactgaacgcctgaatatttcagcacaagaagtgctaaaaacccagctgaa 10419024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 113 - 193
Target Start/End: Complemental strand, 22397338 - 22397258
Alignment:
Q  113 tagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttg 193  Q
    ||||||||||||  ||||||||  || ||| ||||||||||| ||| | ||||||| ||||  |||||||||| |||||||    
T  22397338 tagtttatgaaaaaacaacttatgaatatacaattttcgttagtaagatcttatgaattaacttaaaagcttaattatttg 22397258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 24031165 - 24031213
Alignment:
Q  145 attttcgttaataaaaacttatgagttaatataaaagcttatttatttg 193  Q
    |||||| ||||||| ||||||||| |||||||||||| || ||||||||    
T  24031165 attttctttaataagaacttatgaattaatataaaagtttttttatttg 24031213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 215
Target Start/End: Complemental strand, 34526323 - 34526267
Alignment:
Q  160 aacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctc 215  Q
    ||||||||| |||| ||||||||||||||||||| | ||  ||||||||||||||||    
T  34526323 aacttatgaattaacataaaagcttatttatttgcataaactatttttcataagctc 34526267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 192
Target Start/End: Complemental strand, 43415390 - 43415242
Alignment:
Q  45 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 144  Q
    ||||||||| | |||| ||||  || ||||||||| | |||||| | ||||||| ||| |||||||  ||||||| ||||  |||| |||  |||||| |    
T  43415390 ttgagcttaagtaaaacaacttctgcaaataaataagtttttatgtattattcataaggttgttaatgtagtttacgaaaaaacaatttatcaagatata 43415291  T
Q  145 attttcgttaat-aaaaacttatgagttaatataaaagcttatttattt 192  Q
    || || |||| | |||||||||||| |||| ||||||  ||||||||||    
T  43415290 atatttgttagtgaaaaacttatgaattaacataaaaatttatttattt 43415242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 220
Target Start/End: Complemental strand, 46175988 - 46175904
Alignment:
Q  137 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 220  Q
    |||||| |||||||| || ||| | ||||| | |||| ||||| ||||||||||||  | ||| |||||||||||||||||||||    
T  46175988 aagatacaattttcgctagtaagagcttataaattaaaataaatgcttatttatttacataagttatttttcataagctcaatcc 46175904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 6e-32; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 40 - 220
Target Start/End: Complemental strand, 9572891 - 9572709
Alignment:
Q  40 ttggattgagcttatgcaaaataactaatgaaaataaatacgctttt-attttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaa 138  Q
    ||||||||||||||||||||| | ||  || ||||||||| |||||| |||| ||||||| ||| |||||||  ||||||||||||  |||| |||  ||    
T  9572891 ttggattgagcttatgcaaaacagcttttgcaaataaataagctttttatttattattcataagtttgttaaggtagtttatgaaaaaacaatttatgaa 9572792  T
Q  139 gataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 220  Q
    |||||| |||| |||| | | ||||||||| |||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  9572791 gataaagtttttgttagtgagaacttatgaattaatataaaagcttatttatttgcataagctatttttcataagctcaatcc 9572709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 292 - 381
Target Start/End: Original strand, 19227887 - 19227976
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaa 381  Q
    ||||| ||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  19227887 aagaagctaaaatggattatattactgaaagcctggagatttcagcacaaggagtgccaaaaccccagctgaaagagtcaaatacaagaa 19227976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 33766456 - 33766359
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 389  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||| | |||||||||||||||||| || |||||    
T  33766456 aagaaactaaaatggattaaaatactgaaagtctggagatttcagcacaaggagtgccaaaaccccagttaaaagagtcaattacaagagtgtcaaaa 33766359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 51534478 - 51534575
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 389  Q
    ||||||||||||||||||||| ||| ||||| ||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||| ||||||||    
T  51534478 aagaaactaaaatggattaaaataccgaaagcctggagatttcagcacaaggagtgccaaaacccctgctaaaagagtcaattacaagagtgccaaaa 51534575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 292 - 380
Target Start/End: Original strand, 4532087 - 4532175
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaaga 380  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||    
T  4532087 aagaaactaaaatggattaaaatactgaaagtctggagatttcagcacaaggagtgccaaaaccccaggtaaaagagtcaattacaaga 4532175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 40 - 220
Target Start/End: Complemental strand, 46689656 - 46689475
Alignment:
Q  40 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaag 139  Q
    ||||||||||||||||||||| |  | ||| ||||||| | |||||||||| |||||||  ||||||||||  || ||||| | |  ||||||||  ||     
T  46689656 ttggattgagcttatgcaaaacagtttatgcaaataaaaaagcttttatttattattcatgagcttgttaaggtattttataataaaacaacttatgaaa 46689557  T
Q  140 ataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 220  Q
    ||||||||||||||| | | ||||||||| ||||||||| || ||||||||||| | ||| |||||||||||||||||||||    
T  46689556 ataaaattttcgttagtgagaacttatgaattaatataatagtttatttatttgcataagttatttttcataagctcaatcc 46689475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 292 - 372
Target Start/End: Complemental strand, 34549463 - 34549383
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaa 372  Q
    ||||| ||||||||||||| |||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  34549463 aagaagctaaaatggattatattactaaaagtctggagatttcagcacaaggagtgccaaaaccccagctgaaagagtcaa 34549383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 292 - 372
Target Start/End: Original strand, 45432374 - 45432454
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaa 372  Q
    ||||| ||||||||||||| |||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  45432374 aagaagctaaaatggattatattactaaaagtctggagatttcagcacaaggagtgccaaaaccccagctgaaagagtcaa 45432454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 45 - 193
Target Start/End: Original strand, 46473079 - 46473227
Alignment:
Q  45 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 144  Q
    |||||||||||||||| | ||  || ||||||||| |||||||||| |||||||  || || ||||  |||| |||||||  ||||||||  ||||||||    
T  46473079 ttgagcttatgcaaaacagcttgtgtaaataaataagcttttatttattattcatgaggtttttaaggtagtatatgaaaaaacaacttatgaagataaa 46473178  T
Q  145 attttcgttaataaaaacttatgagttaatataaaagcttatttatttg 193  Q
     ||||||||||||| ||||||||| ||||||||||| ||||||||||||    
T  46473179 gttttcgttaataagaacttatgaattaatataaaatcttatttatttg 46473227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 45 - 217
Target Start/End: Original strand, 13038932 - 13039105
Alignment:
Q  45 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 144  Q
    ||||| ||||||||||   || ||| ||||||||| |||||||| | |||||||  ||||||||||  ||||||||||||  ||||||||  ||||||||    
T  13038932 ttgaggttatgcaaaacggctgatgcaaataaataagcttttatatattattcatgagcttgttaaggtagtttatgaaaaaacaacttatgaagataaa 13039031  T
Q  145 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
     ||||||||| | | || |||||| |||||||||||| ||||||||||| | ||| ||||||||||||| ||||    
T  13039032 gttttcgttagtgagaagttatgaattaatataaaagtttatttatttgcataagctatttttcataagttcaa 13039105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 299 - 375
Target Start/End: Complemental strand, 33936526 - 33936450
Alignment:
Q  299 taaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaatta 375  Q
    |||||||||||| ||||||||||| ||||||||||||| ||||||| |||||||| |||||||||||||||||||||    
T  33936526 taaaatggattatattactgaaagtctggagatttcaggacaaggagtgccaaaatcccagctgaaagagtcaatta 33936450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 71 - 217
Target Start/End: Original strand, 26988159 - 26988306
Alignment:
Q  71 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 170  Q
    ||||||||| |||||||| | ||||||| |||||||| ||  ||||||||||||  ||| ||||  |||||| |||| |||||| ||||||||||||| |    
T  26988159 aaataaataagcttttatgtcttattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattgtcgttagtaaaaacttatgaat 26988258  T
Q  171 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    ||| ||||||||| ||||||||| | ||  ||||||||||||||||||    
T  26988259 taacataaaagctaatttatttgcataaactatttttcataagctcaa 26988306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 71 - 217
Target Start/End: Original strand, 28122627 - 28122776
Alignment:
Q  71 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaata--aaaacttatga 168  Q
    ||||||||  |||||||||| |||||||  ||||| ||||  ||||||||||||  | |||||| ||||||||||||||||||| ||  ||||||| |||    
T  28122627 aaataaattagcttttatttattattcatgagcttcttaaggtagtttatgaaaaaataacttataaagataaaattttcgttagtaagaaaacttctga 28122726  T
Q  169 gttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
     |||||||||||||||||||||||  | ||  ||||||||||||||||||    
T  28122727 attaatataaaagcttatttattttcataaactatttttcataagctcaa 28122776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 48 - 193
Target Start/End: Original strand, 4068103 - 4068248
Alignment:
Q  48 agcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaatt 147  Q
    ||||| ||||||||| ||  || ||||||||| |||||||| | ||||||| |||||||| ||  ||||||||||||  ||||||||  ||||||  |||    
T  4068103 agcttttgcaaaatagcttgtgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacaacttatgaagatactatt 4068202  T
Q  148 ttcgttaataaaaacttatgagttaatataaaagcttatttatttg 193  Q
    ||||||| | | ||||||||| |||||||||||| |||||||||||    
T  4068203 ttcgttagtgagaacttatgaattaatataaaagtttatttatttg 4068248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 13182744 - 13182647
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 389  Q
    |||||| |||||| ||||||| ||||||||| ||||| ||||||| | ||||| ||||||||||||| || |||||||||||||||||||| ||||||    
T  13182744 aagaaattaaaatagattaaaatactgaaagcctggaaatttcagtataaggagtgccaaaaccccaactaaaagagtcaattacaagaattccaaaa 13182647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 220
Target Start/End: Complemental strand, 36423056 - 36422906
Alignment:
Q  71 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 170  Q
    ||||||||| |||||||||| ||||||| ||| |||||||  |||||||||||   ||||||||  ||||||||| |||||||| | | || |||| |      
T  36423056 aaataaataagcttttatttattattcataagtttgttaaggtagtttatgaataaacaacttatgaagataaaaatttcgttagtgagaagttataaaa 36422957  T
Q  171 taatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 220  Q
    ||||||||||| ||||||||||| | ||| |||| |||||||| |||||||    
T  36422956 taatataaaagtttatttatttgcataagttattcttcataagatcaatcc 36422906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 72 - 216
Target Start/End: Complemental strand, 15515421 - 15515276
Alignment:
Q  72 aataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagtt 171  Q
    |||||||| |||||||| | ||||||| |||||||| ||  ||||||||||||  | | ||||  |||||| ||||||||||| | | ||||||||| ||    
T  15515421 aataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaagagcttatgaagatacaattttcgttagtgagaacttatgaatt 15515322  T
Q  172 aatataaaagcttatttattt-gtaaagatatttttcataagctca 216  Q
    || || |||||||||||||||  | ||| |||||||||||||||||    
T  15515321 aacatgaaagcttatttatttacttaagctatttttcataagctca 15515276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 93 - 217
Target Start/End: Original strand, 37712100 - 37712225
Alignment:
Q  93 tattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttattt 192  Q
    |||||| |||||||| ||  ||||||||||||  ||||||||  |||||| || |||||||| ||| ||||||||| |||| ||||||| ||||||||||    
T  37712100 tattcataagcttgtcaaggtagtttatgaaaaaacaacttatgaagatacaactttcgttagtaagaacttatgaattaacataaaagtttatttattt 37712199  T
Q  193 gta-aagatatttttcataagctcaa 217  Q
    | | ||| |||||||| |||||||||    
T  37712200 gcataagctatttttcgtaagctcaa 37712225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 54 - 193
Target Start/End: Complemental strand, 35282686 - 35282547
Alignment:
Q  54 tgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgtt 153  Q
    ||||||| | || ||| ||||||||| || ||||||| ||||| | || | ||||||  ||||||||||||  ||||||||  |||||||||||||  ||    
T  35282686 tgcaaaacagcttatgcaaataaataagcgtttatttattatttataaacatgttaaggtagtttatgaaaaaacaacttatgaagataaaattttaatt 35282587  T
Q  154 aataaaaacttatgagttaatataaaagcttatttatttg 193  Q
    | | ||||||||||| ||||||||||||  ||||||||||    
T  35282586 agtgaaaacttatgaattaatataaaagtctatttatttg 35282547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 71 - 217
Target Start/End: Complemental strand, 37329487 - 37329340
Alignment:
Q  71 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 170  Q
    ||||||||  |||||||| | ||||||| || ||||| ||  ||||||||||||  ||| ||||  |||||| ||||||||||  | | ||||||| | |    
T  37329487 aaataaatgagcttttatgtattattcataaacttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttggtgagaacttataaat 37329388  T
Q  171 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    ||| ||||||||||||||||||| | ||| ||||||||||||||||||    
T  37329387 taacataaaagcttatttatttgcataagttatttttcataagctcaa 37329340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 47 - 193
Target Start/End: Original strand, 51162256 - 51162402
Alignment:
Q  47 gagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaat 146  Q
    ||||||||||||| || || ||| ||||||||| || || || | ||||| ||||| |||||||  ||||||||||||  ||||||||  || ||| |||    
T  51162256 gagcttatgcaaagtagcttatgcaaataaataagcattaatgtattatttacaagtttgttaaggtagtttatgaaaaaacaacttatgaatatacaat 51162355  T
Q  147 tttcgttaataaaaacttatgagttaatataaaagcttatttatttg 193  Q
    |||||||||||| | ||||| | |||| ||||||| ||| |||||||    
T  51162356 tttcgttaataagatcttataaattaacataaaagtttaattatttg 51162402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 47 - 195
Target Start/End: Original strand, 12256594 - 12256741
Alignment:
Q  47 gagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaat 146  Q
    |||||||||||||| |||| ||| |||||| || |||||||| | ||||| | ||| ||||| |  ||||||||||||  |||| |||  ||| || |||    
T  12256594 gagcttatgcaaaacaacttatgtaaataattatgcttttatatattatttataagattgttgatgtagtttatgaaaa-acaatttatgaaggtacaat 12256692  T
Q  147 tttcgttaataaaaacttatgagttaatataaaagcttatttatttgta 195  Q
    |||||||| ||| ||||||||| |||| ||||||  |||||||||||||    
T  12256693 tttcgttagtaagaacttatgaattaaaataaaaatttatttatttgta 12256741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 45 - 192
Target Start/End: Complemental strand, 26946206 - 26946058
Alignment:
Q  45 ttgagcttatgcaaaataactaatgaaaataaatacgctttt-attttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataa 143  Q
    ||||||||||||||||   || ||| ||||||||| |||||| || | ||||||| |||||||||||  ||||||||||||  ||||||||  ||||||     
T  26946206 ttgagcttatgcaaaacggcttatgtaaataaataagctttttatgtgttattcataagcttgttaaggtagtttatgaaaaaacaacttatgaagatac 26946107  T
Q  144 aattttcgttaataaaaacttatgagttaatataaaagcttatttattt 192  Q
    ||||||| ||| | | ||||| ||| ||| || |||||||| |||||||    
T  26946106 aattttccttagtgacaacttgtgaattagtacaaaagcttgtttattt 26946058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 71 - 214
Target Start/End: Original strand, 48819310 - 48819454
Alignment:
Q  71 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 170  Q
    ||||||||  ||||| || | ||||||| |||||||| ||  ||||||||||||  ||| ||||  |||||| | |||| |||| | | ||||||||| |    
T  48819310 aaataaatgagctttaatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacattttttgttagtgagaacttatgaat 48819409  T
Q  171 taatataaaagcttatttatttgta-aagatatttttcataagct 214  Q
    ||| ||||||||||||||||||| | ||| |||||||||||||||    
T  48819410 taacataaaagcttatttatttgcataagctatttttcataagct 48819454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 48 - 214
Target Start/End: Original strand, 10365159 - 10365325
Alignment:
Q  48 agcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaatt 147  Q
    |||||||| ||||||| | ||| |||| ||||  ||||||| | ||||| | |||||||| ||| ||||||||||||  |||||  |  || ||| ||||    
T  10365159 agcttatgtaaaataatttatgcaaatgaataaacttttatgtattattaataagcttgtcaaagtagtttatgaaaa-acaaccgatgaatatacaatt 10365257  T
Q  148 ttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagct 214  Q
    ||||||| ||||||||| | | |||| ||||||||||||| ||||| | ||| |||||||||||||||    
T  10365258 ttcgttagtaaaaacttttaaattaacataaaagcttattcatttgcataagctatttttcataagct 10365325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 217
Target Start/End: Complemental strand, 16889040 - 16888897
Alignment:
Q  71 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 170  Q
    ||||||||| |||||||| | ||||||| |||||||| ||  ||||||||||||  ||| ||||  |||||| ||||||| ||| | | || |||||| |    
T  16889040 aaataaataagcttttatgtattattcataagcttgt-aaggtagtttatgaaaaaacagcttatgaagatacaattttcattagtgagaatttatgact 16888942  T
Q  171 taatataaaagcttatttatttgtaaagatatttttcataagctcaa 217  Q
    ||| |||||||||||||||||||   | | |||||||||||||||||    
T  16888941 taacataaaagcttatttatttg--cataaatttttcataagctcaa 16888897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 47 - 154
Target Start/End: Original strand, 49971238 - 49971345
Alignment:
Q  47 gagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaat 146  Q
    |||||||||||||| |||| ||| |||||||||  | ||||||| ||||| | |||||||||||  ||||||||||||  ||| ||||  |||||| |||    
T  49971238 gagcttatgcaaaacaacttatgcaaataaatattcctttatttattatttataagcttgttaatgtagtttatgaaaaaacagcttacgaagatacaat 49971337  T
Q  147 tttcgtta 154  Q
    ||||||||    
T  49971338 tttcgtta 49971345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 71 - 193
Target Start/End: Complemental strand, 6337831 - 6337709
Alignment:
Q  71 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 170  Q
    ||||||||| |||||||| | ||||||| |||||||| ||  ||||||||||||  ||| ||||  |||||| |||||| ||||   | ||||||||| |    
T  6337831 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaatttttgttagcgagaacttatgaat 6337732  T
Q  171 taatataaaagcttatttatttg 193  Q
    ||| |||||||||||||| ||||    
T  6337731 taacataaaagcttatttgtttg 6337709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 144 - 212
Target Start/End: Complemental strand, 10850068 - 10849999
Alignment:
Q  144 aattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataag 212  Q
    ||||||||||||| ||||||||| | |||| || |||||||||||||||||| ||| |||||||||||||    
T  10850068 aattttcgttaatgaaaacttataaattaacatgaaagcttatttatttgtataagttatttttcataag 10849999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 83 - 193
Target Start/End: Original strand, 12828145 - 12828257
Alignment:
Q  83 ttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaa--gataaaattttcgttaataaaaacttatgagttaatataaaa 180  Q
    |||||||| ||||||| ||  || ||||  ||||||||||||  |||||||| |||  |||||||||||||||||| |||||||||   |||||||||||    
T  12828145 ttttatttgttattcataaaatttttaaggtagtttatgaaaaaacaacttataaaaagataaaattttcgttaatgaaaacttatagattaatataaaa 12828244  T
Q  181 gcttatttatttg 193  Q
    | |||| ||||||    
T  12828245 gtttatctatttg 12828257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 40 - 193
Target Start/End: Original strand, 25485728 - 25485881
Alignment:
Q  40 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaag 139  Q
    ||||||||| ||||| ||||| | || ||| |||||||||   |||||||| |||||||  | ||| ||||  ||||||||||||  |||| |||  |||    
T  25485728 ttggattgaacttatacaaaagagcttatgcaaataaataaatttttatttgttattcatgaccttattaaggtagtttatgaaaaaacaatttatgaag 25485827  T
Q  140 ataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttg 193  Q
    |||||||||||| || | |||| |||| | |||||||||||  |||||||||||    
T  25485828 ataaaattttcgctagtgaaaatttataaattaatataaaaatttatttatttg 25485881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 113 - 193
Target Start/End: Complemental strand, 36259324 - 36259244
Alignment:
Q  113 tagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttg 193  Q
    ||||||||||||  |||  ||| ||| ||| ||||||||||||| || |||||| | ||||||||||||||||||||||||    
T  36259324 tagtttatgaaaaaacagtttataaacatacaattttcgttaatgaagacttataaattaatataaaagcttatttatttg 36259244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 1565345 - 1565303
Alignment:
Q  175 ataaaagcttatttatttgtaaagatatttttcataagctcaa 217  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  1565345 ataaaagcttatttatttgcaaagctatttttcataagctcaa 1565303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 217
Target Start/End: Complemental strand, 35897718 - 35897547
Alignment:
Q  51 ttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttat----gaaagtacaacttagaaagataaaat 146  Q
    |||||||||| |||| ||| ||||||||| | |||||||| ||||||| |||||| | ||| ||||||||    ||||  | |||||| || |||| |||    
T  35897718 ttatgcaaaacaacttatgcaaataaataagtttttatttattattcataagcttttcaaagtagtttatgaaggaaaaaaaaacttataacgatacaat 35897619  T
Q  147 tttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    |||| ||| | |||| |||| | |||| ||||||| ||||||||||  | ||| ||||||||||||| ||||    
T  35897618 tttcattagtgaaaatttataaattaacataaaagtttatttatttacataagctatttttcataagttcaa 35897547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 137 - 217
Target Start/End: Original strand, 15791460 - 15791541
Alignment:
Q  137 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    |||||| ||||||||||||| | | ||||| | |||| ||||||||||||||||||  | ||| ||||||||||||||||||    
T  15791460 aagatacaattttcgttaatgagagcttataaattaaaataaaagcttatttatttacataagctatttttcataagctcaa 15791541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 57 - 193
Target Start/End: Original strand, 26542970 - 26543106
Alignment:
Q  57 aaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaactt-agaaagataaaattttcgttaa 155  Q
    |||| |||| ||| ||||||||| |||||||| | ||||  | ||| |||||||  ||||||||||||  ||||||| |||||| || |||||||||||     
T  26542970 aaaacaacttatgcaaataaatatgcttttatgtattatatataagtttgttaatgtagtttatgaaaaaacaacttaagaaag-tacaattttcgttag 26543068  T
Q  156 taaaaacttatgagttaatataaaagcttatttatttg 193  Q
    | ||||||||| |||||| || |||  |||||||||||    
T  26543069 tgaaaacttataagttaagattaaaatttatttatttg 26543106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 71 - 191
Target Start/End: Complemental strand, 3069929 - 3069809
Alignment:
Q  71 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 170  Q
    |||||| || ||||| || | ||||||| |||||||| ||  ||||||||||||  ||| ||||  |||||| |||||||  || | | ||||||||| |    
T  3069929 aaataagtaagctttaatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcactagtgagaacttatgaat 3069830  T
Q  171 taatataaaagcttatttatt 191  Q
    ||| |||||||||||||||||    
T  3069829 taacataaaagcttatttatt 3069809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 137 - 220
Target Start/End: Original strand, 19395851 - 19395935
Alignment:
Q  137 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 220  Q
    |||||| ||||||||||| | ||| ||||| | |||| |||||| ||||||||| | || ||| |||||||||||||||||||||    
T  19395851 aagatacaattttcgttagtgaaagcttataaattaaaataaaaacttatttatatatataagctatttttcataagctcaatcc 19395935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 50919564 - 50919620
Alignment:
Q  137 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttg 193  Q
    |||||| |||||||||||||||||||| || | |||| || ||||||||||||||||    
T  50919564 aagatacaattttcgttaataaaaactaataaattaacatgaaagcttatttatttg 50919620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 367
Target Start/End: Complemental strand, 26676980 - 26676905
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaaga 367  Q
    |||||||||||||||| || ||||||||| |  || | ||||||||||||| | ||| |||| |||||||||||||    
T  26676980 aagaaactaaaatggaatatattactgaacgcatgaatatttcagcacaagaagtgctaaaaacccagctgaaaga 26676905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 365
Target Start/End: Original strand, 31911555 - 31911622
Alignment:
Q  298 ctaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaa 365  Q
    ||||||| || || ||||||||||| ||| ||||||||| ||||||| || |||||| ||||||||||    
T  31911555 ctaaaattgaatatattactgaaagcctgaagatttcagtacaaggagtgtcaaaacgccagctgaaa 31911622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 217
Target Start/End: Complemental strand, 41196773 - 41196638
Alignment:
Q  83 ttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagc 182  Q
    |||||| | ||||||| |||||||| ||  ||||||||||||  ||| ||||  |||||| |||||| |||| | | | ||| ||| |||| ||||| ||    
T  41196773 ttttatgtattattcataagcttgtcaatgtagtttatgaaaaaacagcttatgaagatacaatttttgttagtgagagcttgtgaattaacataaaggc 41196674  T
Q  183 ttatttatttgta-aagatatttttcataagctcaa 217  Q
    ||||||||||| | ||| |||||| |||||||||||    
T  41196673 ttatttatttgcataagctattttacataagctcaa 41196638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 5347238 - 5347312
Alignment:
Q  144 aattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    ||||||||||||| | |||||||   |||| ||||||||||||||||||  | ||| ||||||||||||||||||    
T  5347238 aattttcgttaatcagaacttatagattaaaataaaagcttatttatttacataagctatttttcataagctcaa 5347312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 160 - 194
Target Start/End: Original strand, 10082351 - 10082385
Alignment:
Q  160 aacttatgagttaatataaaagcttatttatttgt 194  Q
    ||||||||| |||||||||||||||||||||||||    
T  10082351 aacttatgaattaatataaaagcttatttatttgt 10082385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 217
Target Start/End: Complemental strand, 3116071 - 3115990
Alignment:
Q  137 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    |||||| ||||||||||| ||| | ||||| | |||| ||||||||||| ||||||  | ||| ||||||||||||||||||    
T  3116071 aagatacaattttcgttagtaagatcttataaattaaaataaaagcttacttatttacataagttatttttcataagctcaa 3115990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 369
Target Start/End: Original strand, 28756478 - 28756555
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagt 369  Q
    ||||| |||||||| | || ||||||||| | ||| ||||||||||||||||| ||| |||| | || ||||||||||    
T  28756478 aagaagctaaaatgaaatatattactgaatgcctgaagatttcagcacaaggagtgctaaaaactcaactgaaagagt 28756555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 9572707 - 9572755
Alignment:
Q  40 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttat 88  Q
    |||||||||||||||| |||||| || ||| ||||||||| ||||||||    
T  9572707 ttggattgagcttatgaaaaatagcttatgcaaataaataagcttttat 9572755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 193
Target Start/End: Original strand, 20169249 - 20169397
Alignment:
Q  45 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 144  Q
    ||||||||||| |||| | || ||| ||||||||| |||||||| | ||||| | ||| || | || |||||||||||||  |||  ||| ||| ||| |    
T  20169249 ttgagcttatgaaaaacagcttatgcaaataaataagcttttatgtattatttataagtttttaaatatagtttatgaaaaaacagtttataaatataca 20169348  T
Q  145 attttcgttaataaaaacttatgagttaatataaaagcttatttatttg 193  Q
    |||| ||| ||| | ||||||  | |||| |||||| ||||||||||||    
T  20169349 atttccgtcaatgagaacttaaaaattaacataaaaacttatttatttg 20169397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 28690114 - 28690162
Alignment:
Q  170 ttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    |||| ||||||||||||||||||| | ||| ||||||||||||||||||    
T  28690114 ttaacataaaagcttatttatttgcataagctatttttcataagctcaa 28690162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 220
Target Start/End: Original strand, 42591459 - 42591543
Alignment:
Q  137 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 220  Q
    |||||| | ||||||||| | ||| ||||| | |||| |||||| |||||||||||  | ||| |||||||||||||||||||||    
T  42591459 aagatacacttttcgttagtgaaagcttataaattaaaataaaaacttatttatttacataagctatttttcataagctcaatcc 42591543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 47413482 - 47413530
Alignment:
Q  170 ttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    |||| ||||||||||||||||||| | ||| ||||||||||||||||||    
T  47413482 ttaacataaaagcttatttatttgcataagctatttttcataagctcaa 47413530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 5e-29; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 52 - 220
Target Start/End: Complemental strand, 32901242 - 32901073
Alignment:
Q  52 tatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcg 151  Q
    ||||||||| |||| ||| ||||||||| |||||||||| ||||||||||  ||||||| ||||||||| | |  ||||||||  |||||||||||||||    
T  32901242 tatgcaaaacaacttatgtaaataaataagcttttatttattattcacaaatttgttaagatagtttataagaaaacaacttatgaagataaaattttcg 32901143  T
Q  152 ttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 220  Q
    ||| | | |||||||   ||||||||||| | |||||||||| | ||| |||||||||||||||||||||    
T  32901142 ttagtgagaacttatattttaatataaaaacatatttatttgcataagctatttttcataagctcaatcc 32901073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 71 - 217
Target Start/End: Complemental strand, 43971922 - 43971775
Alignment:
Q  71 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 170  Q
    ||||||||| |||||||||| ||||||||||| ||||||||||||||||||| |  |||| |||  |||||||||||||||||| | | |||||||   |    
T  43971922 aaataaataagcttttatttattattcacaagtttgttaaaatagtttatgagaaaacaatttatgaagataaaattttcgttagtgagaacttatattt 43971823  T
Q  171 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    |||| ||||| | |||||||||| | ||| ||||||||||||||||||    
T  43971822 taatttaaaaacatatttatttgcataagttatttttcataagctcaa 43971775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 40 - 217
Target Start/End: Complemental strand, 3876369 - 3876191
Alignment:
Q  40 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaag 139  Q
    ||||||||||||||| ||||| | || ||| ||||||||  |||||||||| ||||||| || || |||||  ||||||||||||  ||||||||  |||    
T  3876369 ttggattgagcttatacaaaacagcttatgtaaataaattagcttttatttattattcataatctagttaaggtagtttatgaaaaaacaacttaagaag 3876270  T
Q  140 ataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
     |||| |||| |||| |   ||||||||| ||||||||||| |||||||||||| | ||| ||||||||||||||||||    
T  3876269 gtaaagtttttgttagttctaacttatgaattaatataaaaacttatttatttgcataagctatttttcataagctcaa 3876191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 45 - 220
Target Start/End: Complemental strand, 33946643 - 33946475
Alignment:
Q  45 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 144  Q
    |||||||||||||||||| || ||| ||||||||| |||||||||| |||||         |||||  || |||||||||   |||||||   |||||||    
T  33946643 ttgagcttatgcaaaatagcttatgcaaataaataagcttttatttattatta--------gttaaggtaatttatgaaaaaccaacttatgtagataaa 33946552  T
Q  145 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 220  Q
    |||||||||||| | ||||||||| |||||||||||||| ||||||||| | ||| |||||||||||||||||||||    
T  33946551 attttcgttaatgagaacttatgaattaatataaaagctcatttatttgcataagctatttttcataagctcaatcc 33946475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 45 - 213
Target Start/End: Complemental strand, 34707814 - 34707645
Alignment:
Q  45 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 144  Q
    |||||||||||||||| |||| | | ||||| ||| |||||||| | ||||||| |||||||||||  ||||||||||||  ||| || |  |||||| |    
T  34707814 ttgagcttatgcaaaacaacttacgtaaatatataagcttttatgtattattcataagcttgttaaggtagtttatgaaaaaacagctaacgaagataca 34707715  T
Q  145 attttcgttaataaaaacttatgagttaatataaaagcttatttatttg-taaagatatttttcataagc 213  Q
    ||||||||||   | |||||| || |||| |||||| |||||||||||| | ||| ||||||||||||||    
T  34707714 attttcgttagcgagaacttacgaattaacataaaaacttatttatttgcttaagttatttttcataagc 34707645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 71 - 215
Target Start/End: Complemental strand, 43080009 - 43079864
Alignment:
Q  71 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 170  Q
    ||||||||| |||||||| | ||||||| |||||||| ||  ||||||||||||  ||| ||||  |||||| ||||||||| | | | ||||||||| |    
T  43080009 aaataaataagcttttatgtgttattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtgattgagaacttatgaat 43079910  T
Q  171 taatataaaagcttatttatttgta-aagatatttttcataagctc 215  Q
    |||  |||||||||||||||||| | ||| ||||||||||||||||    
T  43079909 taacttaaaagcttatttatttgaataagctatttttcataagctc 43079864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 45 - 217
Target Start/End: Original strand, 51409378 - 51409550
Alignment:
Q  45 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 144  Q
    ||||||||||| |||||| || ||| |||||||||  ||||||||| |||||||  || |||| ||  ||||||||||||  ||||||||  ||||||||    
T  51409378 ttgagcttatggaaaatagcttatgcaaataaataatcttttatttattattcatgagtttgtcaaggtagtttatgaaaaaacaacttatgaagataaa 51409477  T
Q  145 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    |||| |  || | |||| |||||| ||||||||||| |||||||||||||| ||| || ||||||||| |||||    
T  51409478 atttccaatactgaaaaattatgaattaatataaaa-cttatttatttgtataagctacttttcataatctcaa 51409550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 71 - 217
Target Start/End: Complemental strand, 40240652 - 40240505
Alignment:
Q  71 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 170  Q
    ||||||| | |||||||| | ||||||| |||| |||  |  ||||||||||||  ||||||||  |||||| ||||||||||| | | | ||||||| |    
T  40240652 aaataaagaagcttttatgtattattcataagcgtgtctaggtagtttatgaaaaaacaacttatgaagatacaattttcgttagtgagagcttatgaat 40240553  T
Q  171 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    ||| ||||||||||||||||||| | ||| ||||||||||||||||||    
T  40240552 taagataaaagcttatttatttgcataagctatttttcataagctcaa 40240505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 45 - 217
Target Start/End: Complemental strand, 22809295 - 22809121
Alignment:
Q  45 ttgagcttatgcaaaataactaatgaaaataaatacgctttt-attttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataa 143  Q
    ||||| |||||||||| | || ||| ||||||||| |||||| || | ||||||| |||||||| ||  ||||||||||||  ||  ||||  ||||||     
T  22809295 ttgaggttatgcaaaacagcttatgcaaataaataagctttttatatattattcataagcttgtcaaggtagtttatgaaaaaactgcttatgaagatac 22809196  T
Q  144 aattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    |||||||||||| || ||||||||| |||| |||||| |||||||||||| | ||| | | ||||||||||||||    
T  22809195 aattttcgttaagaagaacttatgaattaacataaaaacttatttatttgcacaagctttatttcataagctcaa 22809121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 40581178 - 40581012
Alignment:
Q  45 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatg-aaagtacaacttagaaagataa 143  Q
    |||||||||||||||| |||| ||| ||||||||| |||||||| | ||||| | |||||||| ||  ||||||||| |||  ||| | ||  |||| |     
T  40581178 ttgagcttatgcaaaacaacttatgcaaataaataagcttttatgtattattaataagcttgtcaaggtagtttatgaaaaaaacagcgtatgaagaaac 40581079  T
Q  144 aattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcat 209  Q
    ||||||||||| | | ||||||||| |||| |||||| |||||||||||| | ||||||||||||||    
T  40581078 aattttcgttagtgagaacttatgaattaacataaaatcttatttatttgcataagatatttttcat 40581012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 48 - 188
Target Start/End: Complemental strand, 53218138 - 53217998
Alignment:
Q  48 agcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaatt 147  Q
    ||||||||||||| |||| |||  |||||||| | |||||| | ||||||| |||||||| ||  ||||||||||||  |||||||   |||||| ||||    
T  53218138 agcttatgcaaaacaacttatgcgaataaataagattttatgtattattcataagcttgtcaaggtagtttatgaaaaaacaacttttgaagatacaatt 53218039  T
Q  148 ttcgttaataaaaacttatgagttaatataaaagcttattt 188  Q
    ||||||| | | ||||||| | |||| ||||||||||||||    
T  53218038 ttcgttagtgagaacttataaattaaaataaaagcttattt 53217998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 136 - 220
Target Start/End: Original strand, 36266307 - 36266392
Alignment:
Q  136 aaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 220  Q
    |||||||  |||||||||||||||||||||| | |||| |||||| |||||||||||| | ||  |||||||||||||||||||||    
T  36266307 aaagatatgattttcgttaataaaaacttataaattaaaataaaaacttatttatttgcataaattatttttcataagctcaatcc 36266392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 71 - 217
Target Start/End: Original strand, 585031 - 585177
Alignment:
Q  71 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 170  Q
    ||||||||| ||||||||   ||||||| |||||| || |  ||||||||||||  ||||||||  |||||| ||||||||||| |   |||||| || |    
T  585031 aaataaataagcttttatgcattattcaaaagcttcttgaggtagtttatgaaaaaacaacttatgaagatacaattttcgttagtttgaacttaagaat 585130  T
Q  171 taatataaaagcttatttatttgtaaagatatttttcataagctcaa 217  Q
    ||| ||| ||||||||| ||||| | |  ||||||||||||||||||    
T  585131 taacatataagcttattgatttgaataactatttttcataagctcaa 585177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 144 - 220
Target Start/End: Original strand, 38524172 - 38524249
Alignment:
Q  144 aattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 220  Q
    ||||||||||| ||| | ||||||| |||| ||||||||||||||||||| | ||| | |||||||||||||||||||    
T  38524172 aattttcgttagtaagatcttatgaattaacataaaagcttatttatttgcataagctctttttcataagctcaatcc 38524249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 299 - 364
Target Start/End: Original strand, 50642392 - 50642457
Alignment:
Q  299 taaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaa 364  Q
    ||||||| |||| ||||||||||  ||||||||||||||| ||||| |||| ||||||||||||||    
T  50642392 taaaatgaattatattactgaaaacctggagatttcagcataaggagtgccgaaaccccagctgaa 50642457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 45 - 156
Target Start/End: Original strand, 29270346 - 29270457
Alignment:
Q  45 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 144  Q
    |||||||||||||||| |||| ||   |||||||| |||||||| | ||||||| |||||| | || ||| |||||||||  ||| ||||  |||||| |    
T  29270346 ttgagcttatgcaaaacaacttataggaataaataagcttttatgtattattcataagcttttcaagataatttatgaaaaaacagcttatgaagataca 29270445  T
Q  145 attttcgttaat 156  Q
    ||||||||||||    
T  29270446 attttcgttaat 29270457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 137 - 218
Target Start/End: Original strand, 25341347 - 25341429
Alignment:
Q  137 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaat 218  Q
    ||||||||||||||||||   ||||||| ||| ||||||||||| |||||||||||  | ||| | |||||||||||||||||    
T  25341347 aagataaaattttcgttagggaaaacttgtgaattaatataaaaacttatttatttacataagctctttttcataagctcaat 25341429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 193
Target Start/End: Complemental strand, 42956254 - 42956132
Alignment:
Q  71 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 170  Q
    ||||||||| | |||||| | ||||||| || |||||  || |||||||||| |  ||| |||| ||||||| ||||||||||| | | ||||||| | |    
T  42956254 aaataaataagtttttatgtattattcataaacttgtcgaagtagtttatgataaaacagcttataaagatacaattttcgttagtgagaacttataaat 42956155  T
Q  171 taatataaaagcttatttatttg 193  Q
    ||| |||||| ||||||||||||    
T  42956154 taacataaaaacttatttatttg 42956132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 193
Target Start/End: Complemental strand, 45331370 - 45331248
Alignment:
Q  71 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 170  Q
    |||||||||  ||||||| | |||| || ||||||||||| | |||||||||||  ||| ||||  |||||| |||||||| ||  || ||| ||||| |    
T  45331370 aaataaataaccttttatgtattatgcataagcttgttaagacagtttatgaaaaaacatcttatgaagatacaattttcgctagcaagaacatatgaat 45331271  T
Q  171 taatataaaagcttatttatttg 193  Q
    ||| ||||||| |||||||||||    
T  45331270 taacataaaagtttatttatttg 45331248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 4974407 - 4974472
Alignment:
Q  156 taaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 220  Q
    ||||| ||||||| |||| ||||||||||||||||||| | ||| | |||||||||||||||||||    
T  4974407 taaaatcttatgaattaacataaaagcttatttatttgcataagctctttttcataagctcaatcc 4974472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 47 - 124
Target Start/End: Original strand, 10448761 - 10448838
Alignment:
Q  47 gagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaa 124  Q
    |||||||||||||| |||| ||| ||||||||| || ||||| | ||||| | |||||||||||  ||||||||||||    
T  10448761 gagcttatgcaaaacaacttatgcaaataaatatgcctttatgtattatttataagcttgttaatgtagtttatgaaa 10448838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 137 - 217
Target Start/End: Complemental strand, 17752140 - 17752059
Alignment:
Q  137 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    |||||| ||||||||||| ||| ||||||| | |||| ||||||| ||||||||||  | ||| ||||||||||||||||||    
T  17752140 aagatacaattttcgttagtaagaacttataaattaacataaaagtttatttatttacataagctatttttcataagctcaa 17752059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 137 - 217
Target Start/End: Complemental strand, 19053460 - 19053379
Alignment:
Q  137 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    |||||| ||||||||||| ||| ||||||| | |||| ||||||| ||||||||||  | ||| ||||||||||||||||||    
T  19053460 aagatacaattttcgttagtaagaacttataaattaacataaaagtttatttatttacataagctatttttcataagctcaa 19053379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 217
Target Start/End: Complemental strand, 20174973 - 20174868
Alignment:
Q  113 tagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataa 211  Q
    ||||||||||||  ||||||||  || ||| ||||||||||| ||| | ||||||| |||  ||||||||||||||||||| | ||| | ||||||||||    
T  20174973 tagtttatgaaaaaacaacttatgaatatacaattttcgttagtaagatcttatgaattagcataaaagcttatttatttgcataagctctttttcataa 20174874  T
Q  212 gctcaa 217  Q
     |||||    
T  20174873 cctcaa 20174868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 144 - 220
Target Start/End: Original strand, 43376779 - 43376856
Alignment:
Q  144 aattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 220  Q
    ||||||||  ||| ||||||||||| ||||||||||| |||||||| ||| | ||| | |||||||||||||||||||    
T  43376779 aattttcgcaaatgaaaacttatgaattaatataaaaacttatttagttgcataagctctttttcataagctcaatcc 43376856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 299 - 369
Target Start/End: Complemental strand, 20406473 - 20406403
Alignment:
Q  299 taaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagt 369  Q
    ||||||| | || ||||||||| | ||| ||||||||||||||||| ||||||||  ||||||| ||||||    
T  20406473 taaaatgaaatatattactgaacgcctgaagatttcagcacaaggagtgccaaaaatccagctggaagagt 20406403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 193
Target Start/End: Original strand, 27769736 - 27769782
Alignment:
Q  147 tttcgttaataaaaacttatgagttaatataaaagcttatttatttg 193  Q
    |||||||||| ||||||||| | |||| |||||||||||||||||||    
T  27769736 tttcgttaatgaaaacttataaattaacataaaagcttatttatttg 27769782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 217
Target Start/End: Complemental strand, 48597900 - 48597794
Alignment:
Q  113 tagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaactta-tgagttaatataaaagcttatttatttgtaaaga-tatttttcata 210  Q
    |||| |||||||  ||||||||  |||||| ||||||||| | | | |||||| ||| |||| ||||||||||||||||||| ||| | |||||||| ||    
T  48597900 tagtgtatgaaaaaacaacttatgaagatacaattttcgtcagtgagaacttaatgaattaacataaaagcttatttatttgcaaacactatttttcgta 48597801  T
Q  211 agctcaa 217  Q
    |||||||    
T  48597800 agctcaa 48597794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 353
Target Start/End: Complemental strand, 15030167 - 15030106
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaa 353  Q
    |||| |||||||| || || ||||||||||| ||| |||||||||||||| || ||||||||    
T  15030167 aagagactaaaatagaatatattactgaaagcctgaagatttcagcacaaagagtgccaaaa 15030106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 193
Target Start/End: Complemental strand, 53787798 - 53787705
Alignment:
Q  100 aagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttg 193  Q
    |||||| |||| |||||||| ||||  |||  ||| ||||||| |||||| |||| | | ||||||||| |||| |||||| ||||||||||||    
T  53787798 aagctttttaatatagtttacgaaaaaacagtttataaagatataatttttgttattgagaacttatgaattaagataaaaacttatttatttg 53787705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 75 - 183
Target Start/End: Complemental strand, 3870297 - 3870189
Alignment:
Q  75 aaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaat 174  Q
    ||||| |||||||| |||| |||| |||||||| ||  ||||||||||||  ||||| ||  | |||| | ||||| ||||| | ||||||||| ||||     
T  3870297 aaataagcttttatgttttgttcataagcttgtcaaggtagtttatgaaaaaacaacatatgatgatacacttttcattaatgagaacttatgaattaac 3870198  T
Q  175 ataaaagct 183  Q
    |||||||||    
T  3870197 ataaaagct 3870189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 146 - 217
Target Start/End: Original strand, 31787608 - 31787680
Alignment:
Q  146 ttttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    ||||||||||  | ||||||||| |||||||||| | ||||||||||| | ||  ||||||||||||||||||    
T  31787608 ttttcgttaaagagaacttatgaattaatataaacgtttatttatttgcataaactatttttcataagctcaa 31787680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 52895407 - 52895333
Alignment:
Q  144 aattttcgttaataaaaacttatgagttaatataaaagcttatttatttg--taaagatatttttcataagctcaa 217  Q
    ||||||||||| | | || |||||| |||| |||||||||||||||||||  |||| | |||||||||||||||||    
T  52895407 aattttcgttagtgagaatttatgaattaacataaaagcttatttatttgcctaaaca-atttttcataagctcaa 52895333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 1e-26; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 292 - 385
Target Start/End: Complemental strand, 19021489 - 19021396
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgcc 385  Q
    |||||||||||||||||||||||| ||||||  |||||||||||| | ||||| |||||||||||||||| |||||||||||||||||| ||||    
T  19021489 aagaaactaaaatggattaaattattgaaagcttggagatttcagtataaggagtgccaaaaccccagctaaaagagtcaattacaagagtgcc 19021396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 292 - 388
Target Start/End: Complemental strand, 22639659 - 22639563
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaa 388  Q
    ||||||||||||||||||||| |||||||||  ||||||||||| |||||||| |||||||||||||| | ||||||||| |||||||| |||||||    
T  22639659 aagaaactaaaatggattaaaatactgaaagtttggagatttcatcacaaggagtgccaaaaccccagttaaaagagtcagttacaagagtgccaaa 22639563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 39143220 - 39143317
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 389  Q
    ||||||||||||||||||||| ||| ||||| ||||||||||||||| ||||| |||||||| |  |||| |||||||||||||||||| ||||||||    
T  39143220 aagaaactaaaatggattaaaataccgaaagcctggagatttcagcataaggagtgccaaaatcatagctaaaagagtcaattacaagagtgccaaaa 39143317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 71 - 209
Target Start/End: Complemental strand, 13625596 - 13625456
Alignment:
Q  71 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatga-aagtacaacttagaaagataaaattttcgttaataaaaacttatgag 169  Q
    ||||||||| |||||||||| ||||||| ||||||||| |  |||||||||| ||  ||| |||| ||||||||||||||||||| | ||||||||| |     
T  13625596 aaataaatatgcttttatttattattcataagcttgttgaggtagtttatgataaaaacagcttataaagataaaattttcgttagtgaaaacttataaa 13625497  T
Q  170 ttaatataaaagcttatttatttgta-aagatatttttcat 209  Q
    |||||||||||| ||||||||||| | ||| ||||||||||    
T  13625496 ttaatataaaagtttatttatttgcataagctatttttcat 13625456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 49 - 189
Target Start/End: Original strand, 42852011 - 42852150
Alignment:
Q  49 gcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattt 148  Q
    |||||||||||| | || ||  ||||||||| |||||||| | ||||||| |||||||| || |||||||||||||  |||||||| ||| ||| |||||    
T  42852011 gcttatgcaaaacagcttattcaaataaataagcttttatgtattattcataagcttgtcaagatagtttatgaaaaaacaacttataaa-atacaattt 42852109  T
Q  149 tcgttaataaaaacttatgagttaatataaaagcttattta 189  Q
    |||||| | | ||||||||| |||| |||||||||||||||    
T  42852110 tcgttagtgagaacttatgaattaacataaaagcttattta 42852150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 71 - 217
Target Start/End: Complemental strand, 40152951 - 40152804
Alignment:
Q  71 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 170  Q
    ||||||||| | |||||||| |||| || ||  ||||||| |||||||||||||  |||| |||  |||||||||||||||||  | | ||||||||| |    
T  40152951 aaataaataagtttttatttattatccataaatttgttaagatagtttatgaaaaaacaatttatgaagataaaattttcgttcttgagaacttatgaat 40152852  T
Q  171 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    ||||||||||| ||||||||||| | ||||| ||||||||||| ||||    
T  40152851 taatataaaagattatttatttgcataagatgtttttcataagttcaa 40152804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 6537176 - 6537080
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 389  Q
    ||||||||||||||||| ||||||||||||  ||||||||||||||| ||||| |||||||| |  |||| |||||||||||||||| |||| |||||    
T  6537176 aagaaactaaaatggatgaaattactgaaactctggagatttcagcataaggagtgccaaaatctaagct-aaagagtcaattacaaaaatgtcaaaa 6537080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 45 - 193
Target Start/End: Complemental strand, 7364410 - 7364262
Alignment:
Q  45 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 144  Q
    ||||||||||| |||| | || ||| ||| ||||| |||| ||||| ||||||| |||||||||||  |||||||| ||   ||||||||  |||||| |    
T  7364410 ttgagcttatgtaaaacagctgatgcaaaaaaataagcttctatttattattcataagcttgttaaggtagtttatcaacaaacaacttatgaagataca 7364311  T
Q  145 attttcgttaataaaaacttatgagttaatataaaagcttatttatttg 193  Q
    || || |||| | | ||||||||| ||||||||||||||||||||||||    
T  7364310 atatttgttagtgagaacttatgaattaatataaaagcttatttatttg 7364262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 71 - 214
Target Start/End: Original strand, 28625491 - 28625635
Alignment:
Q  71 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 170  Q
    ||||||||| |||||||  | ||||||| |||||||| ||  ||||||||||||  ||| ||||  |||||| ||||||||||| | | ||| ||||| |    
T  28625491 aaataaataagcttttaagtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttagtgagaacctatgaat 28625590  T
Q  171 taatataaaagcttatttatttgta-aagatatttttcataagct 214  Q
    ||| ||||||||||||||||||| | ||| |||||||||||||||    
T  28625591 taacataaaagcttatttatttgcataagttatttttcataagct 28625635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 71 - 214
Target Start/End: Original strand, 24030226 - 24030369
Alignment:
Q  71 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 170  Q
    ||||||||| |||||||| | ||||||| |||||||| ||| ||||||||||||  ||| |||   | |||| ||||||||||| | | ||||||||| |    
T  24030226 aaataaataagcttttatgtattattcataagcttgtcaaagtagtttatgaaaaaaca-cttgcgaggatacaattttcgttagtgagaacttatgaat 24030324  T
Q  171 taatataaaagcttatttatttgta-aagatatttttcataagct 214  Q
    ||| ||||||||||||||||||| | ||| ||||||| |||||||    
T  24030325 taacataaaagcttatttatttgcataagctatttttaataagct 24030369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 51 - 193
Target Start/End: Complemental strand, 13060697 - 13060555
Alignment:
Q  51 ttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttc 150  Q
    ||||| |||| |||| ||| ||||||||| |||||||| | || |||| |||||||| ||  ||||||||||||  ||| ||||  ||| ||  ||||||    
T  13060697 ttatgtaaaagaacttatgcaaataaataagcttttatgtattgttcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagttaccattttc 13060598  T
Q  151 gttaataaaaacttatgagttaatataaaagcttatttatttg 193  Q
    |||| | | ||||||||| |||| |||||||||||||||||||    
T  13060597 gttagtgagaacttatgaattaacataaaagcttatttatttg 13060555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 100 - 217
Target Start/End: Original strand, 35536885 - 35537002
Alignment:
Q  100 aagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aag 198  Q
    |||||||| || |||||||||||||  ||| ||||  |||||| ||||||||||| | | |||||||||  ||||||||||||||||||||||| | |||    
T  35536885 aagcttgtcaagatagtttatgaaaaaacagcttatgaagatacaattttcgttactgagaacttatga-ataatataaaagcttatttatttgcataag 35536983  T
Q  199 atatttttcataagctcaa 217  Q
     |||||||||||| |||||    
T  35536984 ctatttttcataatctcaa 35537002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 45 - 217
Target Start/End: Complemental strand, 29922290 - 29922117
Alignment:
Q  45 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 144  Q
    |||||||||||||||| |  | ||| ||||||||| | |||||| | ||||||| |||||||| ||  ||||||||||||  ||| ||||   | ||| |    
T  29922290 ttgagcttatgcaaaacagtttatgcaaataaataagtttttatgtattattcataagcttgtcaaggtagtttatgaaaacacagcttatgcatataca 29922191  T
Q  145 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    |||||  ||| | | | ||||||| |||||||||||||||||||||||| | ||| |||||||||||| |||||    
T  29922190 attttttttagtgagagcttatgaattaatataaaagcttatttatttgcataagctatttttcataaactcaa 29922117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 137 - 217
Target Start/End: Original strand, 40697083 - 40697164
Alignment:
Q  137 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    |||||| |||||| |||  | ||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||||||||    
T  40697083 aagatacaatttttgttcctgaaaacttatgaattaacataaaagcttatttatttgtataagctatttttcataagctcaa 40697164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 72 - 215
Target Start/End: Complemental strand, 11912176 - 11912032
Alignment:
Q  72 aataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagtt 171  Q
    |||||||| |||||||| | || |||| || ||||| ||| |||||| |||||  | | ||||  |||||| |||||| |||| | | ||||||||| ||    
T  11912176 aataaataagcttttatgtattgttcataatcttgtcaaagtagtttgtgaaaaaagagcttatgaagatacaatttttgttagtgagaacttatgaatt 11912077  T
Q  172 aatataaaagcttatttatttg-taaagatatttttcataagctc 215  Q
    || || |||||||||||||||| | ||||||||||||||||||||    
T  11912076 aacatgaaagcttatttatttgctcaagatatttttcataagctc 11912032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 358
Target Start/End: Complemental strand, 926818 - 926759
Alignment:
Q  299 taaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaacccca 358  Q
    |||||||||||| ||||||||||   |||||||||||||||||||| |||||||||||||    
T  926818 taaaatggattatattactgaaaatttggagatttcagcacaaggagtgccaaaacccca 926759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 47 - 189
Target Start/End: Original strand, 43318990 - 43319132
Alignment:
Q  47 gagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaat 146  Q
    |||||||||||||| |||| ||| ||||||||| |  ||||| | ||||| | |||||||||||  ||||||||||||  |||  |||  ||| || |||    
T  43318990 gagcttatgcaaaacaacttatgcaaataaatatgtctttatgtattatttataagcttgttaatgtagtttatgaaaaaacagtttatgaaggtataat 43319089  T
Q  147 tttcgttaataaaaacttatgagttaatataaaagcttattta 189  Q
    |||||||| | | ||||||||| |||| |||||| ||||||||    
T  43319090 tttcgttagtgagaacttatgaattaagataaaaacttattta 43319132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 45 - 192
Target Start/End: Complemental strand, 2878777 - 2878631
Alignment:
Q  45 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 144  Q
    |||||||||||| ||| | || ||| ||||||||| |||||||| | ||||||| ||| |||| ||  | ||||||||||  |||  |||||| |||| |    
T  2878777 ttgagcttatgctaaacagcttatgcaaataaataagcttttatctattattcataagtttgtcaatgtggtttatgaaacaacagtttagaa-gataca 2878679  T
Q  145 attttcgttaataaaaacttatgagttaatataaaagcttatttattt 192  Q
    ||||| |||| | ||||||| | | |||| ||||||||||||||||||    
T  2878678 atttttgttagtgaaaacttttaaattaacataaaagcttatttattt 2878631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 62 - 193
Target Start/End: Original strand, 17657244 - 17657375
Alignment:
Q  62 aactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaa 161  Q
    |||| ||| ||||||||| |||||||| | ||||||| |||||||  |   ||||||||||||  ||| ||||  ||||||  |||||||||| | | ||    
T  17657244 aacttatgcaaataaataagcttttatgtattattcataagcttgccattgtagtttatgaaaaaacatcttatgaagatacgattttcgttagtgagaa 17657343  T
Q  162 cttatgagttaatataaaagcttatttatttg 193  Q
    ||||||| |||| ||||||| |||||||||||    
T  17657344 cttatgaattaacataaaaggttatttatttg 17657375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 72 - 154
Target Start/End: Original strand, 1868858 - 1868940
Alignment:
Q  72 aataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgtta 154  Q
    |||||||| |||||||| | |||||||||||||||| ||  ||||||||||||   |||||||  |||||| |||||||||||    
T  1868858 aataaataagcttttatgtattattcacaagcttgtcaaggtagtttatgaaaaatcaacttatgaagatacaattttcgtta 1868940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 45 - 123
Target Start/End: Complemental strand, 22202037 - 22201959
Alignment:
Q  45 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaa 123  Q
    |||||||||||||||| | || ||| ||||||||| |||||||| | ||||||| |||||||| ||  |||||||||||    
T  22202037 ttgagcttatgcaaaacagcttatgtaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 22201959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 136 - 197
Target Start/End: Complemental strand, 11163292 - 11163231
Alignment:
Q  136 aaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgtaaa 197  Q
    ||||||| ||||||||||| |   ||||||||| |||| |||||||||||||||||||||||    
T  11163292 aaagatacaattttcgttagtgcgaacttatgaattaacataaaagcttatttatttgtaaa 11163231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 17128263 - 17128348
Alignment:
Q  45 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaa 130  Q
    |||||||||||||||| | || ||| ||||||||| |||||||| | ||||||| || ||| | ||| |||||||||||| |||||    
T  17128263 ttgagcttatgcaaaacagcttatgcaaataaataagcttttatgtattattcataaacttatcaaagtagtttatgaaaatacaa 17128348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 193
Target Start/End: Original strand, 28357181 - 28357274
Alignment:
Q  100 aagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttg 193  Q
    |||||||| ||  ||||||||||||  |||  |||  |||||| ||||||||||||  ||||||||| | |||| |||||||||||||||||||    
T  28357181 aagcttgtcaatgtagtttatgaaaaaacaggttatgaagatacaattttcgttaacgaaaacttataaattaacataaaagcttatttatttg 28357274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 220
Target Start/End: Complemental strand, 1372094 - 1371921
Alignment:
Q  45 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 144  Q
    |||||||||||||||| |  | ||| |||||||||| ||||||| | ||||| | |||||||| ||  | ||||||||||  |||  | |  |||||  |    
T  1372094 ttgagcttatgcaaaacagtttatgtaaataaatacacttttatgtattatttataagcttgtaaatgtggtttatgaaaa-acagttgatgaagattta 1371996  T
Q  145 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 220  Q
    |||||||||||| | | ||||| | |||| |||||| |||||||||||||| ||| |||||||||||||||||||||    
T  1371995 attttcgttaatgaga-cttataaattaacataaaa-cttatttatttgtataagttatttttcataagctcaatcc 1371921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 124
Target Start/End: Complemental strand, 10537321 - 10537241
Alignment:
Q  44 attgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaa 124  Q
    |||||||||||| |||| | || ||| ||||||||| |||||||| | ||||| | |||||||| || |||||||||||||    
T  10537321 attgagcttatgtaaaacagcttatgcaaataaataagcttttatgtattatttataagcttgtcaagatagtttatgaaa 10537241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 192
Target Start/End: Original strand, 41419533 - 41419633
Alignment:
Q  92 ttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatt 191  Q
    ||||||| |||||||| ||  ||||||||||||  ||| ||||  |||||| ||||||||||| | | ||||||| | |||| |||||| ||||||||||    
T  41419533 ttattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttagtgagaacttatcaattaacataaaaacttatttatt 41419632  T
Q  192 t 192  Q
    |    
T  41419633 t 41419633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 217
Target Start/End: Original strand, 6125389 - 6125444
Alignment:
Q  163 ttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    |||||| |||||||||||||||||||||||| | ||| ||||||||||||| ||||    
T  6125389 ttatgaattaatataaaagcttatttatttgcataagctatttttcataagttcaa 6125444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 217
Target Start/End: Original strand, 6144749 - 6144896
Alignment:
Q  71 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 170  Q
    ||||||||| |||||||| | ||| ||| |||||||| ||  || |||||||||  | | ||||  || ||| |||||| ||||   | ||||||||| |    
T  6144749 aaataaataagcttttatatattactcataagcttgtcaaggtattttatgaaaaaatagcttatgaatatacaatttttgttagcgagaacttatgaat 6144848  T
Q  171 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    |||||||||||||| |||||||| | ||  ||||||||||||||||||    
T  6144849 taatataaaagcttgtttatttgcataaactatttttcataagctcaa 6144896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 124
Target Start/End: Original strand, 11991294 - 11991369
Alignment:
Q  49 gcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaa 124  Q
    |||||||||||| |||| ||| ||||||||| |||||||| | ||||| | |||||||| || || ||||||||||    
T  11991294 gcttatgcaaaacaacttatgtaaataaataagcttttatgtattatttataagcttgtaaatatggtttatgaaa 11991369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 366
Target Start/End: Original strand, 22580397 - 22580464
Alignment:
Q  299 taaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaag 366  Q
    ||||||||| || ||||||||||| ||  ||||||||| ||||| | || ||||||||||||||||||    
T  22580397 taaaatggaatatattactgaaagcctaaagatttcagtacaagaagtgtcaaaaccccagctgaaag 22580464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 191
Target Start/End: Original strand, 38498623 - 38498699
Alignment:
Q  113 tagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatt 191  Q
    ||||||||||||  |||| ||| ||||||| |||||| |||| | ||||||||| | |||| |||||||||||||||||    
T  38498623 tagtttatgaaa--acaatttataaagatataatttttgttagtgaaaacttataaattaaaataaaagcttatttatt 38498699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 92 - 217
Target Start/End: Complemental strand, 40452532 - 40452405
Alignment:
Q  92 ttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaatttt-cgttaataaaaacttatgagttaatataaaagcttatttat 190  Q
    ||||||| |||||||| ||  |||||||||||   ||| ||||  |||||| |||||| ||||| | | ||||||||| | || |||| |||||||||||    
T  40452532 ttattcataagcttgtcaaggtagtttatgaagaaacagcttatgaagatataatttttcgttagtgagaacttatgaataaacataatagcttatttat 40452433  T
Q  191 ttgta-aagatatttttcataagctcaa 217  Q
    ||| | ||| ||||||||||||||||||    
T  40452432 ttgcataagctatttttcataagctcaa 40452405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 75 - 217
Target Start/End: Complemental strand, 41059860 - 41059717
Alignment:
Q  75 aaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaat 174  Q
    ||||| |||||||| | ||||||| |||||| | ||  | ||||||||||   || ||||  |||||  ||||||||||| | | ||||||||| ||||     
T  41059860 aaataagcttttatgtattattcataagcttatcaaggttgtttatgaaaaatcaccttatgaagattcaattttcgttagtgagaacttatgaattaac 41059761  T
Q  175 ataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    ||||||||||||||||||| | ||  | ||||||||||||||||    
T  41059760 ataaaagcttatttatttgcataaactgtttttcataagctcaa 41059717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 189
Target Start/End: Complemental strand, 23087842 - 23087736
Alignment:
Q  83 ttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagc 182  Q
    |||||| | ||||| | ||||||||||| |||||||||||||  |||||| |  ||| || |||||| |||| | | ||||||||| ||||||||||| |    
T  23087842 ttttatgtattatttataagcttgttaatatagtttatgaaaaaacaactcatgaaggtacaatttttgttagtgagaacttatgaattaatataaaaac 23087743  T
Q  183 ttattta 189  Q
    | |||||    
T  23087742 taattta 23087736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 365
Target Start/End: Original strand, 26368935 - 26369008
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaa 365  Q
    ||||| |||||||||| || ||||||||| | ||| | ||||||||||||| | ||| |||| |||||||||||    
T  26368935 aagaagctaaaatggaatatattactgaacgcctgaatatttcagcacaagaagtgctaaaaacccagctgaaa 26369008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 113 - 193
Target Start/End: Original strand, 27805968 - 27806048
Alignment:
Q  113 tagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttg 193  Q
    ||||||||||||  |||  ||| ||||||| |||||| |||| | ||||||||| | |||| ||||||| |||||||||||    
T  27805968 tagtttatgaaaaaacatgttataaagatacaatttttgttagtgaaaacttataaattaacataaaagtttatttatttg 27806048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 135 - 217
Target Start/End: Original strand, 41125748 - 41125832
Alignment:
Q  135 gaaagata-aaattttcgttaataaaaacttatgagttaatataaaagcttatttatttg-taaagatatttttcataagctcaa 217  Q
    |||||||| ||||||| |||| | | ||||||||| |||| |||||||||||| ||||||  |||| |||||||||||| |||||    
T  41125748 gaaagatacaaattttagttagtgagaacttatgaattaacataaaagcttatatatttgcaaaagctatttttcataaactcaa 41125832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 42558693 - 42558645
Alignment:
Q  170 ttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    |||| ||||||||||||||||||| | ||| ||||||||||||||||||    
T  42558693 ttaaaataaaagcttatttatttgcataagctatttttcataagctcaa 42558645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 5e-26; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 40 - 214
Target Start/End: Original strand, 6758607 - 6758783
Alignment:
Q  40 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaag 139  Q
    ||||||||||||||||||||| |||| ||| ||||||||| |||||| ||| |||| || |||||||||||  ||||||||||||    ||||||  |||    
T  6758607 ttggattgagcttatgcaaaacaacttatgcaaataaataagcttttgtttattatccataagcttgttaaggtagtttatgaaaaattaacttatcaag 6758706  T
Q  140 ataaaattttcgttaataaaaacttatgagttaatat-aaaagcttatttatttgta-aagatatttttcataagct 214  Q
    ||| || |||||||| | | ||||||||| ||||||| ||||||||||||||||| | ||| ||||||||| |||||    
T  6758707 atacaaatttcgttagtgagaacttatgaattaatataaaaagcttatttatttgcataagctatttttcagaagct 6758783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 45 - 220
Target Start/End: Original strand, 23239232 - 23239408
Alignment:
Q  45 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 144  Q
    ||||||||||| ||||||||| ||  ||||||||| |||||||||| ||||||| |||||||||||  | |||||| |||   ||| |||  | |||| |    
T  23239232 ttgagcttatgaaaaataacttatacaaataaataagcttttatttattattcataagcttgttaacgtggtttatcaaaaagcaaattatgacgataca 23239331  T
Q  145 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 220  Q
    | |||| ||| | | ||||||||| |||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  23239332 actttccttagtgagaacttatgaattaatataaaagcttatttatttgcataagctatttttcataagctcaatcc 23239408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 292 - 372
Target Start/End: Original strand, 12912248 - 12912328
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaa 372  Q
    ||||| ||||||||||||| |||||| |||| ||||||||||||||||||||| || ||||||||||| ||||||||||||    
T  12912248 aagaagctaaaatggattatattactaaaagtctggagatttcagcacaaggagtgtcaaaaccccagatgaaagagtcaa 12912328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 293 - 381
Target Start/End: Complemental strand, 24394009 - 24393921
Alignment:
Q  293 agaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaa 381  Q
    |||| ||||||| ||||| |||||| |||| || |||||||||||||||||| ||||||||||  ||||||||||||||||||||||||    
T  24394009 agaagctaaaattgattatattactaaaagccttgagatttcagcacaaggagtgccaaaaccttagctgaaagagtcaattacaagaa 24393921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 43 - 217
Target Start/End: Complemental strand, 29623580 - 29623406
Alignment:
Q  43 gattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagata 142  Q
    |||||||||||||||||| |||| ||| |||||||||  ||||||||| ||||| |  || |||||||  ||||||||||||  ||||||||  || |||    
T  29623580 gattgagcttatgcaaaacaacttatgcaaataaataaccttttatttattatttatgagtttgttaatgtagtttatgaaaaaacaacttatgaaaata 29623481  T
Q  143 aaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    || ||||||||| | | ||||||||| |||| || ||| |||||||||||| | ||| |||||||||||| |||||    
T  29623480 aagttttcgttagtgagaacttatgaattaacat-aaatcttatttatttgcataagctatttttcataaactcaa 29623406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 62 - 216
Target Start/End: Complemental strand, 32675973 - 32675818
Alignment:
Q  62 aactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaa 161  Q
    |||| ||| ||||||||| |||||||||| ||||||| ||||||  |||  | ||||||||||  | ||||||  |||||| ||||||| ||| | | ||    
T  32675973 aacttatgcaaataaataagcttttatttattattcataagcttcgtaaggttgtttatgaaaaaataacttatgaagatacaattttcattagtgagaa 32675874  T
Q  162 cttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctca 216  Q
    ||||||| ||||||||||| |||||||||||| | ||| |||||||||||||||||    
T  32675873 cttatgaattaatataaaaacttatttatttgcataagttatttttcataagctca 32675818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 219
Target Start/End: Complemental strand, 2040292 - 2040107
Alignment:
Q  40 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatg-----aaagtacaactta 134  Q
    ||||||||||||||||||||| |||| ||  ||||||||| |||||||||| ||||||| ||| |||||||  || ||||||     |||  |||| |||    
T  2040292 ttggattgagcttatgcaaaacaacttatataaataaataagcttttatttattattcataagtttgttaaggtaatttatgaagaaaaaaaacaattta 2040193  T
Q  135 gaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatc 219  Q
     |||| || ||||||| ||| | | ||||||| | ||||||||||| |||||||||||| | ||| |||||||||| |||||||||    
T  2040192 taaagttacaattttcattagttagaacttataaattaatataaaaacttatttatttgcataagttatttttcatgagctcaatc 2040107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 45 - 213
Target Start/End: Complemental strand, 21891439 - 21891270
Alignment:
Q  45 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 144  Q
    ||||||||||||| |||| || ||| ||||||||| | ||| || | ||||||| |||||||| ||  ||||||||||||  ||||||||  |||||| |    
T  21891439 ttgagcttatgcagaatagcttatgcaaataaataagttttgatatattattcataagcttgtcaatgtagtttatgaaataacaacttatgaagataga 21891340  T
Q  145 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagc 213  Q
    |||||||||   || ||||||||| |||| ||||||||||||| ||| | | ||| ||||||||||||||    
T  21891339 attttcgttcgcaagaacttatgaattaacataaaagcttattcattcgcataagctatttttcataagc 21891270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 293 - 372
Target Start/End: Complemental strand, 165610 - 165531
Alignment:
Q  293 agaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaa 372  Q
    |||||||||||||||||| |||| | |||| || |||||||||||||||| | || ||||||||||||||||||||||||    
T  165610 agaaactaaaatggattatattattaaaagtcttgagatttcagcacaagaagtgtcaaaaccccagctgaaagagtcaa 165531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 45 - 180
Target Start/End: Complemental strand, 3830020 - 3829885
Alignment:
Q  45 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 144  Q
    ||||||||||| ||||   || ||| |||||||||||||||||||| ||||||| ||  || |||   ||||||||||||  ||||||||  ||||||||    
T  3830020 ttgagcttatgaaaaacggcttatgcaaataaatacgcttttatttgttattcataaagtttttatggtagtttatgaaaaaacaacttatgaagataaa 3829921  T
Q  145 attttcgttaataaaaacttatgagttaatataaaa 180  Q
    ||||| |||||||| ||||||||| |||| ||||||    
T  3829920 atttttgttaataagaacttatgaattaacataaaa 3829885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 299 - 381
Target Start/End: Original strand, 18972621 - 18972703
Alignment:
Q  299 taaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaa 381  Q
    |||||| ||||| |||||| |||| || |||||||||||||||||| ||||||||||  ||||||||||| ||||||||||||    
T  18972621 taaaattgattatattactaaaagccttgagatttcagcacaaggagtgccaaaaccttagctgaaagagacaattacaagaa 18972703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 71 - 215
Target Start/End: Complemental strand, 2034304 - 2034159
Alignment:
Q  71 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 170  Q
    ||||||||| |||||||| | ||||| | ||| |||| ||  ||||||||||||  ||||||||  |||||| ||||||||| | ||| ||||||||| |    
T  2034304 aaataaataagcttttatgtattatttataagtttgtcaaggtagtttatgaaaaaacaacttaccaagatacaattttcgtaagtaataacttatgatt 2034205  T
Q  171 taatataaaagcttatttatttgta-aagatatttttcataagctc 215  Q
     || ||||||||||||||||||| | ||| ||||| ||||||||||    
T  2034204 caacataaaagcttatttatttgcataagctatttatcataagctc 2034159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 45 - 193
Target Start/End: Original strand, 10873971 - 10874117
Alignment:
Q  45 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 144  Q
    ||||| |||||||||||| || ||| | ||||||| |||||||| ||  ||| | |||||||||||  |||||||||| |  ||| ||||  |||||| |    
T  10873971 ttgagattatgcaaaatagcttatgcatataaataagcttttatatt--attaataagcttgttaaggtagtttatgagaaaacagcttatgaagataca 10874068  T
Q  145 attttcgttaataaaaacttatgagttaatataaaagcttatttatttg 193  Q
    ||||| |||  | ||||||||||| |||| |||||||||||||||||||    
T  10874069 attttagttggtgaaaacttatgaattaacataaaagcttatttatttg 10874117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 44 - 192
Target Start/End: Original strand, 2255718 - 2255866
Alignment:
Q  44 attgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataa 143  Q
    |||||||||||||||||  ||| ||| ||||||||  |||||||| | | ||||| |||||||||||  || |||||||||  ||| ||||  ||||||     
T  2255718 attgagcttatgcaaaacgacttatgcaaataaatgagcttttatgtatgattcataagcttgttaaggtaatttatgaaaaaacagcttatgaagatac 2255817  T
Q  144 aattttcgttaataaaaacttatgagttaatataaaagcttatttattt 192  Q
    |||||| | || | | ||| ||||| |||| ||||||||||||||||||    
T  2255818 aatttttggtagtgagaacatatgaattaacataaaagcttatttattt 2255866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 113 - 220
Target Start/End: Complemental strand, 10184363 - 10184255
Alignment:
Q  113 tagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataa 211  Q
    ||||||||||||  |||| |||  |||| | ||||||||||| ||| | ||||| | |||| |||||||||||||||||| || ||| ||||||||||||    
T  10184363 tagtttatgaaaaaacaatttatgaagaaacaattttcgttagtaagagcttataaattaaaataaaagcttatttatttatataagctatttttcataa 10184264  T
Q  212 gctcaatcc 220  Q
    |||||||||    
T  10184263 gctcaatcc 10184255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 292 - 365
Target Start/End: Complemental strand, 6029429 - 6029356
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaa 365  Q
    ||||| |||||||||| || ||||||||||  ||| ||||||||||||||||| |||||||| ||||| |||||    
T  6029429 aagaagctaaaatggaatatattactgaaaatctgaagatttcagcacaaggagtgccaaaatcccagttgaaa 6029356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 6752915 - 6752972
Alignment:
Q  163 ttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatc 219  Q
    |||||| |||||||||||||||||||||||| | ||| ||||||||||||||||||||    
T  6752915 ttatgaattaatataaaagcttatttatttgcataagctatttttcataagctcaatc 6752972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 214
Target Start/End: Complemental strand, 2027251 - 2027107
Alignment:
Q  71 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 170  Q
    ||||||||| ||||||||   ||||||| ||| |||| || | |||||||||||  ||| ||||  |||||| || ||| |||| ||| ||||||||| |    
T  2027251 aaataaataagcttttatgcattattcagaagtttgtcaagacagtttatgaaaaaacagcttatgaagatacaacttttgttagtaagaacttatgaat 2027152  T
Q  171 taatataaaagcttatttatttgta-aagatatttttcataagct 214  Q
    ||| ||||||| |||| |||||| | ||| |||||||||||||||    
T  2027151 taacataaaagtttatctatttgcataagctatttttcataagct 2027107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 92 - 195
Target Start/End: Complemental strand, 7576915 - 7576812
Alignment:
Q  92 ttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatt 191  Q
    ||||||| ||||||||||| ||| ||||| |||  |||  |||  |||||| |||||||||| |||| ||||||| | |||| |||||| ||||||||||    
T  7576915 ttattcataagcttgttaacataatttataaaaaaacagtttatgaagatataattttcgttgataagaacttattaattaacataaaaacttatttatt 7576816  T
Q  192 tgta 195  Q
    ||||    
T  7576815 tgta 7576812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 10755285 - 10755211
Alignment:
Q  144 aattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    ||||||||||| ||| ||||||||| |||| ||||||||||||||||||| | ||  ||||||||| ||||||||    
T  10755285 aattttcgttagtaagaacttatgaattaacataaaagcttatttatttgcataaactatttttcagaagctcaa 10755211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 137 - 217
Target Start/End: Complemental strand, 9764400 - 9764319
Alignment:
Q  137 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    |||||| ||||||||||||| || |||||| | |||| ||||||||||||||||||| | ||  ||||||||||||| ||||    
T  9764400 aagatacaattttcgttaatgaacacttataaattaacataaaagcttatttatttgcataaattatttttcataagttcaa 9764319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 71 - 124
Target Start/End: Original strand, 24625862 - 24625915
Alignment:
Q  71 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaa 124  Q
    |||||||||||||||||| | ||||||| |||||||||||  ||||||||||||    
T  24625862 aaataaatacgcttttatgtattattcataagcttgttaaggtagtttatgaaa 24625915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 144 - 211
Target Start/End: Complemental strand, 10730210 - 10730142
Alignment:
Q  144 aattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataa 211  Q
    |||||| |||||||| ||||||||| |||| |||||| |||||||||||||| |||  |||||||||||    
T  10730210 aatttttgttaataagaacttatgaattaagataaaaacttatttatttgtataagtcatttttcataa 10730142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 47 - 134
Target Start/End: Original strand, 6632646 - 6632733
Alignment:
Q  47 gagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaactta 134  Q
    |||||||| ||||| |||| ||| ||||||||| |||||||| | ||||| | || ||||||||  ||||||||||||  ||||||||    
T  6632646 gagcttattcaaaacaacttatgcaaataaatatgcttttatgtattatttataaacttgttaatgtagtttatgaaaaaacaactta 6632733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 23239275 - 23239232
Alignment:
Q  175 ataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||    
T  23239275 ataaaagcttatttatttgtataagttatttttcataagctcaa 23239232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 35071414 - 35071359
Alignment:
Q  160 aacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagct 214  Q
    ||||||||| |||| ||||||||||||||||||| | ||| |||||||||||||||    
T  35071414 aacttatgaattaacataaaagcttatttatttgcataagctatttttcataagct 35071359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 369
Target Start/End: Original strand, 7734077 - 7734153
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagt 369  Q
    |||||||||||||| | || ||||||| | | ||| | ||||||||||||| | ||| ||||||||||||||||||||    
T  7734077 aagaaactaaaatgaaatatattactgca-gcctgtaaatttcagcacaagtagtgcaaaaaccccagctgaaagagt 7734153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 193
Target Start/End: Original strand, 10687292 - 10687443
Alignment:
Q  45 ttgagcttatgcaaaataactaatgaaaataaatacgcttttat---tttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagat 141  Q
    |||||||||| ||||| | || ||| ||||||||| ||||| ||   |||||||||| |||| | ||||  ||||||||| ||  ||||||||   ||||    
T  10687292 ttgagcttattcaaaacagcttatgcaaataaataagctttgatgtatttttattcataagcctattaaggtagtttatgtaaaaacaacttatggagat 10687391  T
Q  142 aaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttg 193  Q
    | |||||||||||   | |||||||||  | | |||||||||||||||||||    
T  10687392 acaattttcgttagcgagaacttatgaactgacataaaagcttatttatttg 10687443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 23239410 - 23239362
Alignment:
Q  40 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttat 88  Q
    |||||||||||||||| |||||| || ||| ||||||||| ||||||||    
T  23239410 ttggattgagcttatgaaaaatagcttatgcaaataaataagcttttat 23239362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 292 - 388
Target Start/End: Complemental strand, 9677 - 9581
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaa 388  Q
    ||||||||||||||||||||| |||| |||| ||| ||||||||||||||| | || ||||| ||||||| ||||||||| |||||||| |||||||    
T  9677 aagaaactaaaatggattaaaatactaaaagcctgaagatttcagcacaagaagtgtcaaaatcccagctaaaagagtcagttacaagagtgccaaa 9581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 292 - 372
Target Start/End: Complemental strand, 94980 - 94900
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaa 372  Q
    ||||| ||||||||||||| |||| | |||| ||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  94980 aagaagctaaaatggattatattattaaaagcctggagatttcagcacaaggagtgccaaaatcccagctgaaagagtcaa 94900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 292 - 372
Target Start/End: Complemental strand, 1077 - 997
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaa 372  Q
    ||||| ||||||||||||| |||||  |||| ||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  1077 aagaagctaaaatggattatattacaaaaagtctggagatttcagcataaggagtgacaaaaccccagctgaaagagtcaa 997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 40 - 214
Target Start/End: Original strand, 1038 - 1213
Alignment:
Q  40 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaag 139  Q
    |||||||  |||||| ||||| |||| ||| ||||||||| |||||||||| |||| || ||| |||||||  || |||||| ||  | ||||||  |||    
T  1038 ttggattaggcttatacaaaacaacttatgcaaataaataagcttttatttattatccataagattgttaaggtaatttatggaaaaataacttatgaag 1137  T
Q  140 ataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagct 214  Q
    ||| || |||| ||| | | |||||||   |||||||||||||||||||||||| | ||| |||||||||||||||    
T  1138 atacaaatttcattagtgagaacttatactttaatataaaagcttatttatttgcataagttatttttcataagct 1213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 292 - 377
Target Start/End: Complemental strand, 23894 - 23809
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattaca 377  Q
    ||||| ||||||| ||||| |||||| |||| || |||||||||||||||||| ||||||||||  || |||||||| ||||||||    
T  23894 aagaagctaaaattgattatattactaaaagccttgagatttcagcacaaggagtgccaaaaccgtagttgaaagagacaattaca 23809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 48 - 217
Target Start/End: Original strand, 24733 - 24905
Alignment:
Q  48 agcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaa--tagtttatgaaagtacaacttagaaagataaaa 145  Q
    |||||| |||||| | || ||| ||||||||| |||||||| | ||||||| |||||||| ||||  ||||||||||||  ||| || |  |||||| ||    
T  24733 agcttaagcaaaacagcttatgcaaataaataagcttttatgtattattcataagcttgtcaaaaggtagtttatgaaaaaacagctaatcaagatacaa 24832  T
Q  146 ttttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    | ||| ||| | | ||||||| | |||| |||||| |||||||||||| | ||| || |||||||||||||||    
T  24833 tattcattagtgagaacttataaattaacataaaaacttatttatttgcataagctacttttcataagctcaa 24905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 45 - 217
Target Start/End: Complemental strand, 24489 - 24317
Alignment:
Q  45 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 144  Q
    |||||||| | ||||| | || ||| ||||||||| |||| ||| | ||||||| |||||||| ||  ||||| || |||  ||||||||  |||||| |    
T  24489 ttgagcttctacaaaacagcttatgcaaataaata-gcttgtatgtattattcataagcttgtcaaggtagttgataaaataacaacttacgaagatata 24391  T
Q  145 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 217  Q
    |||||||||| ||||||||| ||| |||  |||||||| |||||||||| | ||  || |||||||||||||||    
T  24390 attttcgttagtaaaaacttgtgaattatcataaaagcctatttatttgcataaactacttttcataagctcaa 24317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 364
Target Start/End: Original strand, 124190 - 124262
Alignment:
Q  292 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaa 364  Q
    ||||| |||||||||| || ||||||||| | ||| | ||||||||||||| | ||| |||| ||||||||||    
T  124190 aagaagctaaaatggaatatattactgaacgcctgaatatttcagcacaagaaatgctaaaaacccagctgaa 124262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University