View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14713_high_42 (Length: 308)

Name: NF14713_high_42
Description: NF14713
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14713_high_42
NF14713_high_42
[»] chr7 (1 HSPs)
chr7 (1-292)||(38193737-38194028)


Alignment Details
Target: chr7 (Bit Score: 280; Significance: 1e-157; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 1 - 292
Target Start/End: Original strand, 38193737 - 38194028
Alignment:
Q  1 attggtatcttccaactgataatatctattttggggcttaatcaagtttggactatctacaacctaatgatgaactgatttcaaatcttgtagcattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  38193737 attggtatcttccaactgataatatctattttggggcttaatcaagtttggactatctacaacctaatgatgaactgatttcaaatcttgtagctttgtt 38193836  T
Q  101 tgcgcacaactaaagatcaaccattgagcatcaattacattattccagattataatattacgttgctttcaaatactccataagacacaagcaaataaat 200  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  38193837 tgcgcacaactaaagatcaaacattgagcatcaattacattattccagattataatattacattgctttcaaatactccataagacacaagcaaataaat 38193936  T
Q  201 tcgaatcttcaattgttaattgctgcggaatttggaaaacaatacctgaaatggcttgctctccgttcataacatccctcacaccatgagaa 292  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38193937 tcgaatcttcaattgttaattgctgcggaatttggaaaacaatacctgaaatggcttgctctccgttcataacatccctcacaccatgagaa 38194028  T

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