View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14713_high_49 (Length: 279)
Name: NF14713_high_49
Description: NF14713
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14713_high_49 |
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Alignment Details
Target: chr7 (Bit Score: 164; Significance: 1e-87; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 14 - 185
Target Start/End: Complemental strand, 1702355 - 1702185
Alignment:
| Q |
14 |
ataatactatatgataactagaaaattaaatcctaaaaacaaactcaaccaaaattatagctcttttcacaactaactaaccttccaaaaaaccgttaca |
113 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1702355 |
ataatactatatgataactagaaaattaaatcctaaaaacaaactcaaccaaaattatagctcttttcacaactaactaaccttccaaaaaaccgttaca |
1702256 |
T |
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| Q |
114 |
aaaacctaaacaaatcatcatatatataaacaaaccttccctcacttttttcaatcctctttatcactcaca |
185 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1702255 |
aaaacctaaacaaatcat-atatatataaacaaaccttccctcacttttttcaatcctctttatcactcaca |
1702185 |
T |
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