View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14713_high_61 (Length: 242)
Name: NF14713_high_61
Description: NF14713
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14713_high_61 |
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Alignment Details
Target: chr1 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 187 - 223
Target Start/End: Original strand, 25814482 - 25814518
Alignment:
| Q |
187 |
aagttttgtctacaaatacatgtacccaacaaaattt |
223 |
Q |
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| T |
25814482 |
aagttttgtctacaaatacatgtacccaacaaaattt |
25814518 |
T |
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Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 44
Target Start/End: Original strand, 25814429 - 25814462
Alignment:
| Q |
11 |
aagaatatcaccattcaaaaaatatttgctttta |
44 |
Q |
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| T |
25814429 |
aagaaaatcaccattcaaaaaatatttgctttta |
25814462 |
T |
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