View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14713_high_62 (Length: 242)
Name: NF14713_high_62
Description: NF14713
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14713_high_62 |
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Alignment Details
Target: chr1 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 9 - 228
Target Start/End: Original strand, 40863497 - 40863716
Alignment:
| Q |
9 |
aatatagataaggaaaagtacttaattatcatattttgtatattcagaatttgaaagtctcgnnnnnnnatatcttaaaactctagtgtgtactgttcta |
108 |
Q |
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| T |
40863497 |
aatatagataaggaaaagtacttaattatcatattttgtatattcagaatttgaaagtctcgtttttttatatcttaaaactctagtgtgtactgttcta |
40863596 |
T |
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| Q |
109 |
tccttgggcaccttgtgtttgggtatggttattcaattcattcattttgcctttacaaactaaaagtgaggagagtcttctattataattacctttcttt |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40863597 |
tccttgggcaccttgtgtttgggtatggttattcaattcattcattttgcctttacaaactaaaagtgaggagagtcttctattataattacctttcttt |
40863696 |
T |
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| Q |
209 |
ataactattatgattattat |
228 |
Q |
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|||||||||||||||||||| |
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| T |
40863697 |
ataactattatgattattat |
40863716 |
T |
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