View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14713_high_70 (Length: 213)
Name: NF14713_high_70
Description: NF14713
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14713_high_70 |
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Alignment Details
Target: chr1 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 39620951 - 39620754
Alignment:
| Q |
1 |
tatgagatgctaaatgatgcaagacctcgagtacttagaatttggaaatttcnnnnnnnnnnnnnnnnnnnntattgttcaaatgtaatcatattcaaca |
100 |
Q |
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| T |
39620951 |
tatgagatgttaaatgatgcaagacctcgagtacttagaatttggaaatttcaaaaaacaaaatgacaaaaatattgttcaaatgtaatcatattcaaca |
39620852 |
T |
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| Q |
101 |
gtatttgttcaagaggtgtcagctgagtatcgaagatggactttgtaaaatgttcaataagagtataatacgatcattgtaaatctttgattaaaatt |
198 |
Q |
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| T |
39620851 |
gtatttattcaagaggtgtcagctgagtatcgaagatggactttgtaaaatgttcaataagagtataatacgatcattgtaaatctttgattaaaatt |
39620754 |
T |
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