View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14713_high_8 (Length: 602)

Name: NF14713_high_8
Description: NF14713
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14713_high_8
NF14713_high_8
[»] chr1 (38 HSPs)
chr1 (255-434)||(49712450-49712629)
chr1 (473-595)||(49655037-49655162)
chr1 (89-194)||(51765645-51765750)
chr1 (89-212)||(13316151-13316274)
chr1 (89-212)||(20762914-20763037)
chr1 (89-196)||(8550599-8550706)
chr1 (89-196)||(49918596-49918703)
chr1 (89-196)||(10925468-10925575)
chr1 (89-183)||(3157111-3157205)
chr1 (89-196)||(833985-834091)
chr1 (90-196)||(37559679-37559786)
chr1 (89-212)||(9987450-9987579)
chr1 (89-192)||(20622052-20622157)
chr1 (89-196)||(31659484-31659591)
chr1 (85-196)||(40122016-40122126)
chr1 (89-196)||(44455406-44455513)
chr1 (89-212)||(21054206-21054335)
chr1 (537-595)||(49712626-49712684)
chr1 (89-192)||(40282625-40282731)
chr1 (131-196)||(50166995-50167060)
chr1 (141-196)||(13137795-13137851)
chr1 (89-185)||(28223248-28223343)
chr1 (132-196)||(45644173-45644237)
chr1 (89-188)||(196733-196831)
chr1 (89-196)||(37503377-37503479)
chr1 (89-194)||(50169032-50169136)
chr1 (141-196)||(13659166-13659221)
chr1 (89-196)||(28265374-28265480)
chr1 (130-196)||(3846936-3847002)
chr1 (141-194)||(3189642-3189695)
chr1 (141-194)||(3198459-3198512)
chr1 (141-194)||(3207298-3207351)
chr1 (89-196)||(28220041-28220148)
chr1 (141-196)||(30476261-30476317)
chr1 (85-196)||(23555086-23555196)
chr1 (213-248)||(49712083-49712118)
chr1 (89-191)||(9036666-9036770)
chr1 (143-171)||(15820596-15820624)
[»] chr2 (27 HSPs)
chr2 (89-212)||(32289814-32289937)
chr2 (89-213)||(4484127-4484250)
chr2 (89-213)||(36205463-36205587)
chr2 (89-213)||(4502932-4503055)
chr2 (89-193)||(5723074-5723178)
chr2 (89-188)||(30833594-30833693)
chr2 (89-196)||(17057184-17057291)
chr2 (89-196)||(17085167-17085274)
chr2 (89-196)||(36987890-36987997)
chr2 (89-212)||(45100000-45100122)
chr2 (89-196)||(723562-723668)
chr2 (89-196)||(6594819-6594926)
chr2 (89-196)||(38312486-38312593)
chr2 (89-196)||(14633643-14633749)
chr2 (89-196)||(34139588-34139694)
chr2 (89-196)||(42362592-42362698)
chr2 (89-192)||(6266940-6267043)
chr2 (132-196)||(33162269-33162333)
chr2 (132-212)||(36773847-36773926)
chr2 (141-196)||(2334233-2334288)
chr2 (143-196)||(11690787-11690841)
chr2 (130-196)||(24885872-24885938)
chr2 (89-170)||(11067547-11067627)
chr2 (89-195)||(14202240-14202345)
chr2 (89-170)||(2838192-2838272)
chr2 (131-169)||(12123434-12123472)
chr2 (144-188)||(29868169-29868213)
[»] chr8 (27 HSPs)
chr8 (89-212)||(2627984-2628108)
chr8 (89-212)||(19945158-19945281)
chr8 (89-212)||(44304101-44304224)
chr8 (89-213)||(30143586-30143709)
chr8 (89-212)||(17982899-17983021)
chr8 (89-212)||(31218503-31218625)
chr8 (89-193)||(34254149-34254253)
chr8 (89-212)||(1746018-1746141)
chr8 (89-193)||(34256325-34256429)
chr8 (89-214)||(15213032-15213157)
chr8 (89-194)||(42498441-42498546)
chr8 (85-194)||(27811520-27811631)
chr8 (89-196)||(4731904-4732011)
chr8 (89-196)||(41366433-41366539)
chr8 (89-196)||(33352396-33352503)
chr8 (132-213)||(5689556-5689636)
chr8 (93-212)||(4733956-4734075)
chr8 (130-196)||(6599252-6599318)
chr8 (130-196)||(6674705-6674771)
chr8 (89-191)||(25690204-25690308)
chr8 (131-196)||(12702446-12702511)
chr8 (89-196)||(18105891-18105997)
chr8 (141-196)||(43036720-43036776)
chr8 (141-188)||(3303494-3303541)
chr8 (131-188)||(4743051-4743108)
chr8 (89-213)||(40321322-40321443)
chr8 (131-212)||(1345176-1345256)
[»] chr5 (30 HSPs)
chr5 (89-212)||(26178132-26178255)
chr5 (89-212)||(18441441-18441563)
chr5 (89-194)||(16409725-16409830)
chr5 (89-212)||(9789021-9789143)
chr5 (89-204)||(26171012-26171127)
chr5 (89-212)||(30182834-30182957)
chr5 (89-193)||(36073861-36073965)
chr5 (89-188)||(13343306-13343405)
chr5 (89-196)||(30682737-30682845)
chr5 (89-187)||(39468373-39468471)
chr5 (89-213)||(25413006-25413130)
chr5 (89-196)||(42428245-42428352)
chr5 (89-196)||(5887250-5887356)
chr5 (130-213)||(16649634-16649716)
chr5 (130-195)||(8565764-8565829)
chr5 (141-196)||(28750470-28750526)
chr5 (89-196)||(42426050-42426157)
chr5 (89-188)||(13488447-13488545)
chr5 (89-212)||(29720612-29720743)
chr5 (143-196)||(31183273-31183326)
chr5 (141-196)||(534056-534112)
chr5 (132-188)||(3075573-3075629)
chr5 (141-196)||(13240049-13240104)
chr5 (141-196)||(33831976-33832031)
chr5 (89-213)||(29722772-29722904)
chr5 (141-186)||(19806660-19806705)
chr5 (143-188)||(32637123-32637168)
chr5 (141-196)||(538318-538374)
chr5 (89-191)||(22536108-22536210)
chr5 (89-191)||(29750973-29751079)
[»] chr6 (25 HSPs)
chr6 (89-212)||(2171326-2171449)
chr6 (89-212)||(16452127-16452250)
chr6 (89-212)||(5408869-5408992)
chr6 (89-212)||(5413194-5413317)
chr6 (89-212)||(30834333-30834456)
chr6 (89-213)||(3072551-3072679)
chr6 (89-185)||(9182857-9182953)
chr6 (89-192)||(6097266-6097369)
chr6 (89-193)||(31404493-31404597)
chr6 (123-192)||(412368-412438)
chr6 (89-197)||(28137225-28137332)
chr6 (141-196)||(26954106-26954161)
chr6 (89-191)||(27648102-27648205)
chr6 (107-212)||(5406002-5406107)
chr6 (107-212)||(5410327-5410432)
chr6 (89-191)||(16555120-16555223)
chr6 (89-191)||(16578332-16578435)
chr6 (89-191)||(16616945-16617048)
chr6 (89-191)||(16631676-16631779)
chr6 (89-191)||(16653363-16653466)
chr6 (132-196)||(3038742-3038806)
chr6 (141-185)||(33160177-33160221)
chr6 (152-213)||(22963507-22963568)
chr6 (152-213)||(23824825-23824886)
chr6 (141-177)||(9182824-9182860)
[»] scaffold0491 (2 HSPs)
scaffold0491 (89-194)||(10976-11081)
scaffold0491 (89-194)||(8550-8655)
[»] chr3 (39 HSPs)
chr3 (85-212)||(5260122-5260249)
chr3 (89-194)||(23199954-23200058)
chr3 (89-212)||(5257943-5258066)
chr3 (89-194)||(7779818-7779923)
chr3 (89-212)||(9635923-9636046)
chr3 (89-212)||(801335-801463)
chr3 (85-196)||(7762508-7762619)
chr3 (89-212)||(9581529-9581652)
chr3 (89-212)||(9634621-9634743)
chr3 (89-212)||(19683687-19683810)
chr3 (89-195)||(40735628-40735734)
chr3 (89-214)||(7764711-7764836)
chr3 (89-188)||(37408705-37408804)
chr3 (89-194)||(45095409-45095514)
chr3 (89-196)||(29813307-29813415)
chr3 (89-197)||(40734743-40734851)
chr3 (89-194)||(23197761-23197859)
chr3 (89-196)||(29811114-29811222)
chr3 (89-196)||(22834822-22834928)
chr3 (89-196)||(51399060-51399167)
chr3 (89-188)||(761091-761189)
chr3 (132-196)||(9666285-9666349)
chr3 (132-188)||(29196213-29196269)
chr3 (141-196)||(39153179-39153235)
chr3 (89-196)||(5236272-5236379)
chr3 (90-193)||(29682604-29682706)
chr3 (89-188)||(54635373-54635475)
chr3 (141-196)||(16499312-16499367)
chr3 (89-188)||(23391736-23391834)
chr3 (141-188)||(37406987-37407034)
chr3 (89-196)||(44700299-44700405)
chr3 (89-191)||(6716749-6716854)
chr3 (131-196)||(27305534-27305597)
chr3 (89-191)||(45283236-45283340)
chr3 (141-194)||(2074900-2074952)
chr3 (143-196)||(31314740-31314793)
chr3 (131-172)||(21350850-21350891)
chr3 (143-188)||(23410155-23410200)
chr3 (141-170)||(32891388-32891417)
[»] scaffold0286 (1 HSPs)
scaffold0286 (94-212)||(11817-11935)
[»] chr7 (32 HSPs)
chr7 (89-188)||(48409053-48409152)
chr7 (89-188)||(4179019-4179118)
chr7 (89-212)||(25766757-25766879)
chr7 (89-212)||(29991299-29991422)
chr7 (89-194)||(39731617-39731723)
chr7 (89-196)||(23555287-23555395)
chr7 (89-196)||(25616101-25616208)
chr7 (89-212)||(35854162-35854285)
chr7 (89-196)||(27348063-27348170)
chr7 (89-196)||(48489677-48489784)
chr7 (89-196)||(18126892-18127000)
chr7 (89-194)||(24790250-24790355)
chr7 (89-196)||(43864490-43864598)
chr7 (89-196)||(495803-495909)
chr7 (89-196)||(41648829-41648935)
chr7 (89-188)||(47675960-47676058)
chr7 (89-212)||(48491822-48491944)
chr7 (89-213)||(26417562-26417686)
chr7 (89-188)||(4586407-4586506)
chr7 (89-188)||(41317262-41317360)
chr7 (104-212)||(43503947-43504061)
chr7 (92-196)||(8153587-8153690)
chr7 (89-196)||(19502425-19502532)
chr7 (89-196)||(31732783-31732891)
chr7 (89-188)||(47673768-47673866)
chr7 (143-196)||(14069648-14069702)
chr7 (143-196)||(14379676-14379730)
chr7 (89-191)||(20344145-20344250)
chr7 (89-213)||(1113899-1114022)
chr7 (143-196)||(38671040-38671093)
chr7 (132-196)||(36146227-36146291)
chr7 (141-170)||(23344263-23344292)
[»] chr4 (26 HSPs)
chr4 (89-188)||(13992114-13992213)
chr4 (89-212)||(48143294-48143417)
chr4 (89-212)||(5369881-5370004)
chr4 (89-196)||(56178451-56178558)
chr4 (89-195)||(34570230-34570336)
chr4 (92-196)||(52082478-52082582)
chr4 (130-212)||(29999628-29999710)
chr4 (89-215)||(31495096-31495227)
chr4 (89-196)||(37740871-37740979)
chr4 (89-196)||(47038231-47038337)
chr4 (89-196)||(48893458-48893564)
chr4 (89-196)||(52095177-52095284)
chr4 (89-196)||(54199723-54199830)
chr4 (89-196)||(5872064-5872168)
chr4 (89-186)||(9927284-9927381)
chr4 (141-196)||(26175451-26175507)
chr4 (132-196)||(45687002-45687066)
chr4 (89-196)||(46147210-46147317)
chr4 (89-196)||(52467172-52467280)
chr4 (87-213)||(36463195-36463319)
chr4 (141-196)||(12743743-12743799)
chr4 (141-196)||(12739368-12739424)
chr4 (141-212)||(29254791-29254861)
chr4 (132-170)||(4588240-4588278)
chr4 (144-196)||(5207666-5207717)
chr4 (89-121)||(5429925-5429957)
[»] scaffold0002 (1 HSPs)
scaffold0002 (89-212)||(434780-434903)
[»] scaffold1519 (1 HSPs)
scaffold1519 (89-212)||(1162-1285)
[»] scaffold0016 (1 HSPs)
scaffold0016 (89-194)||(114849-114955)
[»] scaffold0066 (1 HSPs)
scaffold0066 (89-185)||(20241-20337)
[»] scaffold0006 (1 HSPs)
scaffold0006 (141-196)||(148927-148982)
[»] scaffold1668 (1 HSPs)
scaffold1668 (144-188)||(1325-1369)


Alignment Details
Target: chr1 (Bit Score: 164; Significance: 2e-87; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 255 - 434
Target Start/End: Original strand, 49712450 - 49712629
Alignment:
Q  255 gtggaagtaaatttccccaagtagacaatgattgcaacatccaaccaatgaacataatcatacttattacttgcaccctttccatttgtaatgccattgc 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||| |||||||||||||    
T  49712450 gtggaagtaaatttccccaagtagacaatgattgcaacatccaaccactgaacataatcatacttattgtttgcaccctttccattagtaatgccattgc 49712549  T
Q  355 ttaatgttctagcttttcattttcacatcattagtattctcagccatctccaataccctccgtctagaaccaggatgaac 434  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49712550 ttaatgttctagcttttcattttcacatcattagtattctcagccatctccaataccctccgtctagaaccaggatgaac 49712629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 473 - 595
Target Start/End: Original strand, 49655037 - 49655162
Alignment:
Q  473 tcccctaatttattcatacatcatccttttttattttcttg---ccacaaccactgtatgctctatagaaccaaaatttgaagcttgtgaagccaaaaca 569  Q
    |||| |||||||||||||||||| |||||||||| |||||    ||||||||||||||||||||||||||| |||||||| || ||||||||||||||||    
T  49655037 tcccttaatttattcatacatcacccttttttatcttcttcttaccacaaccactgtatgctctatagaacaaaaatttgtagattgtgaagccaaaaca 49655136  T
Q  570 tgtggcaaccaaagtataatctaccc 595  Q
    ||||||||||||||||||| ||||||    
T  49655137 tgtggcaaccaaagtataagctaccc 49655162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 89 - 194
Target Start/End: Original strand, 51765645 - 51765750
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||  |||||||||||||||||||||||||||||||||| || || |||||||||||    
T  51765645 attagatctaggtgttgttattgttgattattgcttgcactcacttaattagtggttactactttcctttgctccacacatcatatttcgtattggtgtg 51765744  T
Q  189 gttttg 194  Q
    ||||||    
T  51765745 gttttg 51765750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 13316274 - 13316151
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| |||||||||||||||||| |||||  |||||||||| || ||||||||||||||||||||||||||  || || |||||||||||    
T  13316274 attagatctaggtgctgttattgttgattattgcttgcattcactttgttattgattactactttcctttgctccacacattatatttcgtattggtgtg 13316175  T
Q  189 gttttgagatcggaatacacaaca 212  Q
     |||||||| |||||| |||||||    
T  13316174 attttgagaccggaattcacaaca 13316151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 20762914 - 20763037
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| |||||||||||||||||| ||| |  ||||||| || |||||| ||||||||||||||||||||||| || ||||||||||||||    
T  20762914 attagatctaggtgctgttattgttgattattgcttgaattcactttgatattggttaatactttcctttgctccacacatcatagtttgtattggtgtg 20763013  T
Q  189 gttttgagatcggaatacacaaca 212  Q
     |||||||| |||||| |||||||    
T  20763014 attttgagaccggaattcacaaca 20763037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 89 - 196
Target Start/End: Complemental strand, 8550706 - 8550599
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    ||||||||||||||||||||||||||||||||| |||    ||||||| || |||||||||||||||||||||||||||||| || ||||||||||||||    
T  8550706 attagatctaggtgttgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtg 8550607  T
Q  189 gttttgag 196  Q
     |||||||    
T  8550606 attttgag 8550599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 89 - 196
Target Start/End: Original strand, 49918596 - 49918703
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    ||||||| |||||| |||||||||||||||||| |||    ||||||| || |||||||||||||||||||||||||||||| || ||||||||||||||    
T  49918596 attagatataggtgctgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtg 49918695  T
Q  189 gttttgag 196  Q
     |||||||    
T  49918696 attttgag 49918703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 89 - 196
Target Start/End: Original strand, 10925468 - 10925575
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    ||||||||||||||||||||||||||||||||| |||    ||||||| || || ||||||||||||||||||||||||| | || ||||||||| ||||    
T  10925468 attagatctaggtgttgttattgttgattattgcttgtgttcactttgatattgattactactttcctttgctccacacaacatagtttgtattgttgtg 10925567  T
Q  189 gttttgag 196  Q
     |||||||    
T  10925568 attttgag 10925575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 89 - 183
Target Start/End: Original strand, 3157111 - 3157205
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattg 183  Q
    |||||||||||||| |||||||||||||||||| |||    ||||||| || |||||||||||||||||||||||||||||| || |||||||||    
T  3157111 attagatctaggtgctgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattg 3157205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 89 - 196
Target Start/End: Complemental strand, 834091 - 833985
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    ||||||||| |||||||||||||||| |||||| |||     |||||| || |||||||||||||||||||||||||||||| || ||||||||||||||    
T  834091 attagatcttggtgttgttattgttg-ttattgcttgtgtttactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtg 833993  T
Q  189 gttttgag 196  Q
     |||||||    
T  833992 attttgag 833985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 90 - 196
Target Start/End: Complemental strand, 37559786 - 37559679
Alignment:
Q  90 ttagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg- 188  Q
    ||||||||||||| |||||||||||||||||| |||    ||||||| || |||||||||||||||||||||||| ||||| || ||| ||||||||||     
T  37559786 ttagatctaggtgctgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctccagacatcatagtttatattggtgtga 37559687  T
Q  189 gttttgag 196  Q
    ||||||||    
T  37559686 gttttgag 37559679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 9987450 - 9987579
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttg-ttagtggttactactttcctttgctccacacatcttacttt--gtattggt 185  Q
    |||||||||||||| |||| ||||||||||||| |||||| ||||||| || |||||||| ||| |||||||||||||||||| || |||  ||||||||    
T  9987450 attagatctaggtggtgtt-ttgttgattattgcttgcacacactttgattggtggttaccactctcctttgctccacacatcatatttttcgtattggt 9987548  T
Q  186 gtggt----tttgagatcggaatacacaaca 212  Q
    |||||    |||||||||||||| |||||||    
T  9987549 gtggttcgatttgagatcggaattcacaaca 9987579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 89 - 192
Target Start/End: Complemental strand, 20622157 - 20622052
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccac--tttgttag-tggttactactttcctttgctccacacatcttactttgtattggt 185  Q
    |||||||||||||| |||| ||||||||||||| |||||| |||  |||||| | |||||||||||||||||||||||||||||| ||||| |||  |||    
T  20622157 attagatctaggtggtgtt-ttgttgattattgcttgcacacacactttgtttggtggttactactttcctttgctccacacatcatacttggtacaggt 20622059  T
Q  186 gtggttt 192  Q
    |||||||    
T  20622058 gtggttt 20622052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 89 - 196
Target Start/End: Original strand, 31659484 - 31659591
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||| |||||||||||||||||||||||| |||    || |||| || ||||||||||||| |||| ||||||||||| || ||| ||||||||||    
T  31659484 attagatcaaggtgttgttattgttgattattgcttgtgttcattttgatattggttactacttttcttttctccacacatcatattttatattggtgtg 31659583  T
Q  189 gttttgag 196  Q
     |||||||    
T  31659584 attttgag 31659591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 40122126 - 40122016
Alignment:
Q  85 ctaaattagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattgg 184  Q
    |||||||||||||||||||||||||| ||| || ||| |||    ||||| | || ||||||||||||||||||||||||| |||| || ||||||||||    
T  40122126 ctaaattagatctaggtgttgttattattg-ttgttgcttgtgttcacttagatattggttactactttcctttgctccacgcatcatagtttgtattgg 40122028  T
Q  185 tgtggttttgag 196  Q
    |||| |||||||    
T  40122027 tgtgattttgag 40122016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 89 - 196
Target Start/End: Original strand, 44455406 - 44455513
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| |||||||||||||||||| |||    ||||||| || ||||||| ||||| |||| ||||||| ||| || ||||||||||||||    
T  44455406 attagatctaggtgctgttattgttgattattgtttgtgttcactttgatattggttaccacttttcttttctccacatatcatagtttgtattggtgtg 44455505  T
Q  189 gttttgag 196  Q
     |||||||    
T  44455506 attttgag 44455513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 21054206 - 21054335
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttag-tggttactactttcctttgctccacacatcttact--ttgtattggt 185  Q
    |||||||||||||| |||| ||||||||||||| |||||| ||||| ||| | ||||||| ||| |||||||||||||||||| || |  ||||||||||    
T  21054206 attagatctaggtggtgtt-ttgttgattattgcttgcacacacttagtttggtggttaccactctcctttgctccacacatcatatttcttgtattggt 21054304  T
Q  186 gtggt----tttgagatcggaatacacaaca 212  Q
    |||||    |||||||||||||| |||||||    
T  21054305 gtggttcgatttgagatcggaattcacaaca 21054335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 49712626 - 49712684
Alignment:
Q  537 gaaccaaaatttgaagcttgtgaagccaaaacatgtggcaaccaaagtataatctaccc 595  Q
    |||| |||||||| || ||||||||||||||||||||||||||||||||||| ||||||    
T  49712626 gaacaaaaatttgtagattgtgaagccaaaacatgtggcaaccaaagtataagctaccc 49712684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 89 - 192
Target Start/End: Original strand, 40282625 - 40282731
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccac--tttgtta--gtggttactactttcctttgctccacacatcttactttgtattgg 184  Q
    |||||||||||||| |||| ||||||||||||| |||||| |||  ||||||   |||||||| ||| |||||||||||||||||| || |||| |||||    
T  40282625 attagatctaggtggtgtt-ttgttgattattgcttgcacacacactttgttttggtggttaccactctcctttgctccacacatcatagtttgcattgg 40282723  T
Q  185 tgtggttt 192  Q
    ||||||||    
T  40282724 tgtggttt 40282731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 131 - 196
Target Start/End: Complemental strand, 50167060 - 50166995
Alignment:
Q  131 actttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtggttttgag 196  Q
    |||||| || |||||||||||||||||||||||||||||| || ||||| |||||||| |||||||    
T  50167060 actttgatattggttactactttcctttgctccacacatcatagtttgttttggtgtgattttgag 50166995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 141 - 196
Target Start/End: Complemental strand, 13137851 - 13137795
Alignment:
Q  141 tggttactactttcctttgctccacacatcttactttgtattggtgtg-gttttgag 196  Q
    |||||||||||||||||||||||||||||| || |||||||||||||| ||||||||    
T  13137851 tggttactactttcctttgctccacacatcataatttgtattggtgtgagttttgag 13137795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 28223343 - 28223248
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggt 185  Q
    |||||||||||||||||||||| ||| || ||| |||    ||||||| || |||||||||||||| ||||||||||||||| || |||||||||||    
T  28223343 attagatctaggtgttgttattattg-ttgttgcttgtgttcactttgatattggttactactttcgtttgctccacacatcatagtttgtattggt 28223248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 132 - 196
Target Start/End: Complemental strand, 45644237 - 45644173
Alignment:
Q  132 ctttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtggttttgag 196  Q
    ||||| || |||||||||||||||||||||||||||||| || |||||||| ||||| |||||||    
T  45644237 ctttgatattggttactactttcctttgctccacacatcatagtttgtatttgtgtgattttgag 45644173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 89 - 188
Target Start/End: Complemental strand, 196831 - 196733
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    ||||||| |||||||||||||| ||| || ||| |||    ||||||| || ||||||||| |||||||||||||||||||| || ||||||||||||||    
T  196831 attagatgtaggtgttgttattattg-ttgttgcttgtgttcactttgatattggttactattttcctttgctccacacatcataatttgtattggtgtg 196733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 89 - 196
Target Start/End: Complemental strand, 37503479 - 37503377
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    ||||||||||||||||| ||||||||||||||| |||    ||||||| || |     |||||||||||| ||||||||||| || ||||||||||||||    
T  37503479 attagatctaggtgttgatattgttgattattgcttgtgttcactttgatatt-----ctactttcctttactccacacatcatagtttgtattggtgtg 37503385  T
Q  189 gttttgag 196  Q
     |||||||    
T  37503384 attttgag 37503377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 89 - 194
Target Start/End: Complemental strand, 50169136 - 50169032
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    ||||||| |||||||||||||| ||| || ||| |||    ||||||| || |||||||||||||| |||||| |||||||| || ||||||||||||||    
T  50169136 attagatataggtgttgttattattg-ttgttgtttgtgttcactttgatattggttactactttcatttgcttcacacatcatagtttgtattggtgtg 50169038  T
Q  189 gttttg 194  Q
     |||||    
T  50169037 attttg 50169032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 141 - 196
Target Start/End: Complemental strand, 13659221 - 13659166
Alignment:
Q  141 tggttactactttcctttgctccacacatcttactttgtattggtgtggttttgag 196  Q
    |||||||||||||||||||||||||||||  || ||||||||| |||| |||||||    
T  13659221 tggttactactttcctttgctccacacattatagtttgtattgatgtgattttgag 13659166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 89 - 196
Target Start/End: Complemental strand, 28265480 - 28265374
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    ||||||||||| |||||||||| ||| || ||| |||    ||||||| || ||| ||||| |||||||| ||||||||||| || ||||||||||||||    
T  28265480 attagatctagatgttgttattattg-ttgttgcttgtgttcactttgatattggctactattttcctttactccacacatcatagtttgtattggtgtg 28265382  T
Q  189 gttttgag 196  Q
     |||||||    
T  28265381 attttgag 28265374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 196
Target Start/End: Complemental strand, 3847002 - 3846936
Alignment:
Q  130 cactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtggttttgag 196  Q
    ||||||| || |||||||||||||||||| ||||||||||| || |||||||| || || |||||||    
T  3847002 cactttgatattggttactactttcctttactccacacatcatagtttgtattagtatgattttgag 3846936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 3189642 - 3189695
Alignment:
Q  141 tggttactactttcctttgctccacacatcttactttgtattggtgtggttttg 194  Q
    |||||||||||||||||||||||| ||||| || ||| |||||||||| |||||    
T  3189642 tggttactactttcctttgctccagacatcatagtttatattggtgtgattttg 3189695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 3198459 - 3198512
Alignment:
Q  141 tggttactactttcctttgctccacacatcttactttgtattggtgtggttttg 194  Q
    |||||||||||||||||||||||| ||||| || ||| |||||||||| |||||    
T  3198459 tggttactactttcctttgctccagacatcatagtttatattggtgtgattttg 3198512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 3207298 - 3207351
Alignment:
Q  141 tggttactactttcctttgctccacacatcttactttgtattggtgtggttttg 194  Q
    |||||||||||||||||||||||| ||||| || ||| |||||||||| |||||    
T  3207298 tggttactactttcctttgctccagacatcatagtttatattggtgtgattttg 3207351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 89 - 196
Target Start/End: Complemental strand, 28220148 - 28220041
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||||||||||| ||| || ||| |||    ||||||  || ||||||||| ||| ||||| |||||||||| || ||||||||||||||    
T  28220148 attagatctaggtgttgttattattg-ttgttgtttgtgttcactttaatattggttactaattttctttgttccacacatcatagtttgtattggtgtg 28220050  T
Q  189 -gttttgag 196  Q
     ||||||||    
T  28220049 agttttgag 28220041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 141 - 196
Target Start/End: Complemental strand, 30476317 - 30476261
Alignment:
Q  141 tggttactactttcctttgctccacacatcttactttgtattggtgtg-gttttgag 196  Q
    |||||||||||||||||| ||||||||||  || |||||||||||||| ||||||||    
T  30476317 tggttactactttcctttactccacacattatagtttgtattggtgtgagttttgag 30476261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 23555196 - 23555086
Alignment:
Q  85 ctaaattagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattgg 184  Q
    |||||||||||||||||||||||||||||| || ||| |||     ||||||  | || |||||||||| |||||||||||||||| |  ||| ||||||    
T  23555196 ctaaattagatctaggtgttgttattgttg-ttgttgcttgtgtttactttgacattgattactacttttctttgctccacacatcattgtttctattgg 23555098  T
Q  185 tgtggttttgag 196  Q
    || | |||||||    
T  23555097 tgcgattttgag 23555086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 248
Target Start/End: Original strand, 49712083 - 49712118
Alignment:
Q  213 tgtcaggaaacaatatagaaagtgaattttaaattt 248  Q
    ||||||||||||||||||| ||||||||||||||||    
T  49712083 tgtcaggaaacaatatagatagtgaattttaaattt 49712118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 191
Target Start/End: Original strand, 9036666 - 9036770
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacc--cactttgttag-tggttactactttcctttgctccacacatcttactttgtattggt 185  Q
    |||||||||||||| |||| |||||| || ||| ||||||   ||||||||| | ||||||| ||| ||||| |||||||||||| | ||||| ||||||    
T  9036666 attagatctaggtggtgtt-ttgttgtttgttgcttgcacaaacactttgtttggtggttaccactctccttagctccacacatcatcctttgcattggt 9036764  T
Q  186 gtggtt 191  Q
    ||||||    
T  9036765 gtggtt 9036770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 143 - 171
Target Start/End: Original strand, 15820596 - 15820624
Alignment:
Q  143 gttactactttcctttgctccacacatct 171  Q
    |||||||||||||||||||||||||||||    
T  15820596 gttactactttcctttgctccacacatct 15820624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 116; Significance: 1e-58; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 32289814 - 32289937
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32289814 attagatctaggtgttgttattgttgattattgcttgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 32289913  T
Q  189 gttttgagatcggaatacacaaca 212  Q
    |||||||||||||||| |||||||    
T  32289914 gttttgagatcggaattcacaaca 32289937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 89 - 213
Target Start/End: Complemental strand, 4484250 - 4484127
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||| || || ||||||||||     
T  4484250 attagatctaggtgttgttattgttgattattgcttgcactcactttgttattggttactactttcctttgctccacacatcatatttcgtattggtgt- 4484152  T
Q  189 gttttgagatcggaatacacaacat 213  Q
    | ||||||| |||||| ||||||||    
T  4484151 gatttgagaccggaattcacaacat 4484127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 89 - 213
Target Start/End: Complemental strand, 36205587 - 36205463
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| |||||||||||||||||| |||    |||||||||| |||||||||||||||||||||||||||||| || |||||||| |||||    
T  36205587 attagatctaggtgctgttattgttgattattgcttgtgttcactttgttattggttactactttcctttgctccacacatcatagtttgtattagtgtg 36205488  T
Q  189 gttttgagatcggaatacacaacat 213  Q
     |||||||| |||||| ||||||||    
T  36205487 attttgagaccggaattcacaacat 36205463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 89 - 213
Target Start/End: Complemental strand, 4503055 - 4502932
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| |||||||||||||||||| |||||  |||||||||| |||||||||||||||||| ||||||||||  || |||||||||||||     
T  4503055 attagatctaggtgctgttattgttgattattgcttgcattcactttgttattggttactactttcctttactccacacattatagtttgtattggtgt- 4502957  T
Q  189 gttttgagatcggaatacacaacat 213  Q
    | ||||||| |||||| ||||||||    
T  4502956 gatttgagaccggaattcacaacat 4502932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 89 - 193
Target Start/End: Complemental strand, 5723178 - 5723074
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    ||||||||||||||||||||||||||||||||| |||  | ||||||| || ||||||||||||| |||||||||||||||| || ||||||||||||||    
T  5723178 attagatctaggtgttgttattgttgattattgtttgtgctcactttgatattggttactactttactttgctccacacatcatagtttgtattggtgtg 5723079  T
Q  189 gtttt 193  Q
     ||||    
T  5723078 atttt 5723074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 89 - 188
Target Start/End: Original strand, 30833594 - 30833693
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    ||||||||||||||||||||||||||||||||| |||||| ||| |  ||| |||||||||||||||||||||||||||||| || || |||||||||||    
T  30833594 attagatctaggtgttgttattgttgattattgcttgcactcacataattaatggttactactttcctttgctccacacatcatatttcgtattggtgtg 30833693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 89 - 196
Target Start/End: Complemental strand, 17057291 - 17057184
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| |||||||||||||||||| |||    ||||||| || |||||||||||||||||||||| ||||||| || ||||||||||||||    
T  17057291 attagatctaggtgctgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctctacacatcatattttgtattggtgtg 17057192  T
Q  189 gttttgag 196  Q
     |||||||    
T  17057191 attttgag 17057184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 89 - 196
Target Start/End: Complemental strand, 17085274 - 17085167
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| |||||||||||||||||| |||    ||||||| || |||||||||||||||||||||| ||||||| || ||||||||||||||    
T  17085274 attagatctaggtgctgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctctacacatcatattttgtattggtgtg 17085175  T
Q  189 gttttgag 196  Q
     |||||||    
T  17085174 attttgag 17085167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 89 - 196
Target Start/End: Complemental strand, 36987997 - 36987890
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    ||||||||||||||||||||||||||||||||| |||     ||||||  | |||||||||||||||||||||||||||||| || ||||||||||||||    
T  36987997 attagatctaggtgttgttattgttgattattgcttgtgtttactttgaaattggttactactttcctttgctccacacatcatagtttgtattggtgtg 36987898  T
Q  189 gttttgag 196  Q
     |||||||    
T  36987897 attttgag 36987890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 45100000 - 45100122
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| |||||||||||||||||| |||    ||||||| || |||||||||||||||||||||||||||||| || || ||||||||||     
T  45100000 attagatctaggtgctgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctccacacatcataattcgtattggtgt- 45100098  T
Q  189 gttttgagatcggaatacacaaca 212  Q
    | ||||||| |||||| |||||||    
T  45100099 gatttgagaccggaattcacaaca 45100122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 89 - 196
Target Start/End: Complemental strand, 723668 - 723562
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||||||||||| ||| || |||||||    ||||||| || |||||||||||||||||||||||||||||| || ||||||||||||||    
T  723668 attagatctaggtgttgttattattg-ttgttgattgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtg 723570  T
Q  189 gttttgag 196  Q
     |||||||    
T  723569 attttgag 723562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 89 - 196
Target Start/End: Complemental strand, 6594926 - 6594819
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| |||||||||||||||||  |||    ||||||| || ||||||||||||| |||||||||||||||| || ||||||||||||||    
T  6594926 attagatctaggtgctgttattgttgattattacttgtgttcactttgatattggttactactttactttgctccacacatcatagtttgtattggtgtg 6594827  T
Q  189 gttttgag 196  Q
     |||||||    
T  6594826 attttgag 6594819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 89 - 196
Target Start/End: Original strand, 38312486 - 38312593
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| |||||||||||||| ||| |||    ||||||| || |||||||||||||||||||||||||||||| |  ||| ||||||||||    
T  38312486 attagatctaggtgctgttattgttgattgttgcttgtgttcactttgatattggttactactttcctttgctccacacatcattgtttatattggtgtg 38312585  T
Q  189 gttttgag 196  Q
     |||||||    
T  38312586 attttgag 38312593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 89 - 196
Target Start/End: Complemental strand, 14633749 - 14633643
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||||||||||| ||| || ||| |||    ||||||| || ||||||||||||||||||||| |||||||| || ||||||||||||||    
T  14633749 attagatctaggtgttgttattattg-ttgttgcttgtgttcactttgatattggttactactttcctttgcttcacacatcatagtttgtattggtgtg 14633651  T
Q  189 gttttgag 196  Q
     |||||||    
T  14633650 attttgag 14633643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 89 - 196
Target Start/End: Complemental strand, 34139694 - 34139588
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    ||||||||||||| |||||||| ||| || ||| |||    ||||||| || |||||||||||||||||||||||||||||| || ||||||||||||||    
T  34139694 attagatctaggtcttgttattattg-ttgttgcttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtg 34139596  T
Q  189 gttttgag 196  Q
     |||||||    
T  34139595 attttgag 34139588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 89 - 196
Target Start/End: Original strand, 42362592 - 42362698
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||||||||||| ||| || ||| |||    ||||||| |  |||||||||||||||||||||||||||||| || ||||||||||||||    
T  42362592 attagatctaggtgttgttattattg-ttgttgcttgagttcactttgattttggttactactttcctttgctccacacatcatagtttgtattggtgtg 42362690  T
Q  189 gttttgag 196  Q
     |||||||    
T  42362691 attttgag 42362698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 89 - 192
Target Start/End: Original strand, 6266940 - 6267043
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttag-tggttactactttcctttgctccacacatcttactttgtattggtgt 187  Q
    ||||||||||||||||||| ||||||||| ||| || ||| ||||||||| | ||||||| ||| |||||||||||||||||| || |||  ||||||||    
T  6266940 attagatctaggtgttgtt-ttgttgatttttgcttacacacactttgtttggtggttaccactctcctttgctccacacatcatagtttacattggtgt 6267038  T
Q  188 ggttt 192  Q
    |||||    
T  6267039 ggttt 6267043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 132 - 196
Target Start/End: Complemental strand, 33162333 - 33162269
Alignment:
Q  132 ctttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtggttttgag 196  Q
    ||||| || |||||||||||||||||||||||||||||| || ||||||||| |||| |||||||    
T  33162333 ctttgatattggttactactttcctttgctccacacatcatagtttgtattgatgtgattttgag 33162269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 132 - 212
Target Start/End: Original strand, 36773847 - 36773926
Alignment:
Q  132 ctttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtggttttgagatcggaatacacaaca 212  Q
    ||||| || |||||||||||||| ||||||||||||||| || |||||||||||||| |||||| ||| |||| |||||||    
T  36773847 ctttgatattggttactactttcatttgctccacacatcatagtttgtattggtgtgattttga-atccgaattcacaaca 36773926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 196
Target Start/End: Complemental strand, 2334288 - 2334233
Alignment:
Q  141 tggttactactttcctttgctccacacatcttactttgtattggtgtggttttgag 196  Q
    ||||||||||||||||||||| |||||||| || |||||||||||||| |||||||    
T  2334288 tggttactactttcctttgcttcacacatcatagtttgtattggtgtgattttgag 2334233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 11690787 - 11690841
Alignment:
Q  143 gttactactttcctttgctccacacatcttactttgtattggtgtg-gttttgag 196  Q
    |||||||||||||||||||||||||||| || |||||||||||||| ||||||||    
T  11690787 gttactactttcctttgctccacacatcatagtttgtattggtgtgagttttgag 11690841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 130 - 196
Target Start/End: Original strand, 24885872 - 24885938
Alignment:
Q  130 cactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtggttttgag 196  Q
    ||||||| || ||||||||| ||||||||||| |||||||| || |||||||||||||| |||||||    
T  24885872 cactttgatattggttactattttcctttgctacacacatcatagtttgtattggtgtgattttgag 24885938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 89 - 170
Target Start/End: Original strand, 11067547 - 11067627
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatc 170  Q
    |||||||||||||||||||||| ||| || ||| |||    ||||||| || ||||||||||||||||||||||||||||||    
T  11067547 attagatctaggtgttgttattattg-ttgttgcttgtgttcactttgatattggttactactttcctttgctccacacatc 11067627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 89 - 195
Target Start/End: Complemental strand, 14202345 - 14202240
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||||||||||| ||| || ||| ||||   ||||||| || || ||||||||||||||| ||||||| ||| || ||||| ||||| ||    
T  14202345 attagatctaggtgttgttattattg-ttgttgcttgcgttcactttgatattgattactactttcctttactccacatatcatagtttgtgttggtatg 14202247  T
Q  189 gttttga 195  Q
     ||||||    
T  14202246 attttga 14202240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 89 - 170
Target Start/End: Original strand, 2838192 - 2838272
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatc 170  Q
    |||| ||||||||||||||||||||| || ||| |||     |||||| ||||||||||||||||||||| |||||||||||    
T  2838192 attatatctaggtgttgttattgttg-ttgttgtttgtgtttactttgatagtggttactactttcctttactccacacatc 2838272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 131 - 169
Target Start/End: Complemental strand, 12123472 - 12123434
Alignment:
Q  131 actttgttagtggttactactttcctttgctccacacat 169  Q
    |||||| || |||||||||||||||||||||||||||||    
T  12123472 actttgatattggttactactttcctttgctccacacat 12123434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 29868169 - 29868213
Alignment:
Q  144 ttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||| |||||||||||||||| || ||||||||| ||||    
T  29868169 ttactacttttctttgctccacacatcatagtttgtattgctgtg 29868213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 101; Significance: 9e-50; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 2627984 - 2628108
Alignment:
Q  89 attagatctaggtgttgttattgttgattatt-gattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgt 187  Q
    ||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2627984 attagatctaggtgttgttattgttgattttttgcttgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgt 2628083  T
Q  188 ggttttgagatcggaatacacaaca 212  Q
    ||||| ||||||||||| |||||||    
T  2628084 ggtttcgagatcggaattcacaaca 2628108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 19945281 - 19945158
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| |||||||||||||||||| |||||  |||||||||| ||||||||||||||||||||||||||||||  | ||||||||||||||    
T  19945281 attagatctaggtgctgttattgttgattattgcttgcattcactttgttattggttactactttcctttgctccacacatcaaagtttgtattggtgtg 19945182  T
Q  189 gttttgagatcggaatacacaaca 212  Q
     |||||||| |||||| |||||||    
T  19945181 attttgagaccggaattcacaaca 19945158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 44304101 - 44304224
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    ||||||||||||||||||||||||||||||||| |||  | ||||||  || |||||||||||||||||||||||||||||| || | ||||||||||||    
T  44304101 attagatctaggtgttgttattgttgattattgcttgtgctcactttaatattggttactactttcctttgctccacacatcatagtatgtattggtgtg 44304200  T
Q  189 gttttgagatcggaatacacaaca 212  Q
     |||||||| |||||| |||||||    
T  44304201 attttgagaacggaattcacaaca 44304224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 89 - 213
Target Start/End: Original strand, 30143586 - 30143709
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    ||||||||||||||||||||||||||||||||| |||    ||||||| || |||||||||||||||||||||||||||||| || ||||||||||||||    
T  30143586 attagatctaggtgttgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtg 30143685  T
Q  189 gttttgagatcggaatacacaacat 213  Q
     ||||||| || |||| ||||||||    
T  30143686 attttgag-tctgaattcacaacat 30143709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 17982899 - 17983021
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| |||||||||||||||||| |||    |||||||||| |||||||||| ||||||||||||||||||| || |||||||||||||     
T  17982899 attagatctaggtgctgttattgttgattattgcttgtgttcactttgttattggttactacgttcctttgctccacacatcatagtttgtattggtgt- 17982997  T
Q  189 gttttgagatcggaatacacaaca 212  Q
    | |||||||||||||| |||||||    
T  17982998 gatttgagatcggaattcacaaca 17983021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 31218503 - 31218625
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| |||||||||||||||||| |||||  |||||||||| ||||| |||||||||||||||||||||||| || ||| |||||||||     
T  31218503 attagatctaggtgctgttattgttgattattgcttgcattcactttgttattggttgctactttcctttgctccacacatcatagtttatattggtgt- 31218601  T
Q  189 gttttgagatcggaatacacaaca 212  Q
    | ||||||| |||||| |||||||    
T  31218602 gatttgagaccggaattcacaaca 31218625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 89 - 193
Target Start/End: Complemental strand, 34254253 - 34254149
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| |||||||||||||||||| |||  | ||||||| || |||||||||||||||||||||||||||||| || ||||||||||||||    
T  34254253 attagatctaggtgctgttattgttgattattgcttgtgctcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtg 34254154  T
Q  189 gtttt 193  Q
     ||||    
T  34254153 ttttt 34254149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 1746141 - 1746018
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| |||||||||||||||||| |||    |||||||||| |||||||||||||||||| ||||||||||| || || |||||||||||    
T  1746141 attagatctaggtgctgttattgttgattattgcttgtgttcactttgttattggttactactttcctttactccacacatcatagttcgtattggtgtg 1746042  T
Q  189 gttttgagatcggaatacacaaca 212  Q
     |||||||| || ||| |||||||    
T  1746041 attttgagaccgaaattcacaaca 1746018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 89 - 193
Target Start/End: Complemental strand, 34256429 - 34256325
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| |||||||||||||||||| |||  | ||||||  || |||||||||||||||||||||||||||||| || ||||||||||||||    
T  34256429 attagatctaggtgctgttattgttgattattgcttgtgctcactttaatattggttactactttcctttgctccacacatcatagtttgtattggtgtg 34256330  T
Q  189 gtttt 193  Q
     ||||    
T  34256329 ttttt 34256325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 89 - 214
Target Start/End: Original strand, 15213032 - 15213157
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||| ||||| |||||||||||||||||| |||    ||||||| || |||||||||||||||||||||||||||||| || ||||||||||||||    
T  15213032 attagatcaaggtgctgttattgttgattattgtttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtg 15213131  T
Q  189 -gttttgagatcggaatacacaacatg 214  Q
     |||||||| || |||| |||||||||    
T  15213132 agttttgag-tccgaattcacaacatg 15213157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 89 - 194
Target Start/End: Original strand, 42498441 - 42498546
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    ||||||||||||||||||||||||| ||||||| |||    ||||||| || ||||| |||||||||||||||||||||||| || ||||||||||||||    
T  42498441 attagatctaggtgttgttattgttaattattgcttgtgttcactttgatattggttgctactttcctttgctccacacatcatattttgtattggtgtg 42498540  T
Q  189 gttttg 194  Q
     |||||    
T  42498541 attttg 42498546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 85 - 194
Target Start/End: Original strand, 27811520 - 27811631
Alignment:
Q  85 ctaaattagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatc--ttactttgtatt 182  Q
    ||||||||||||||||||||||||||||||||||||| |||    ||||||| || |||||||||||||||||| |||||||||||   || ||||||||    
T  27811520 ctaaattagatctaggtgttgttattgttgattattgcttgtgttcactttgatattggttactactttcctttcctccacacatcatatagtttgtatt 27811619  T
Q  183 ggtgtggttttg 194  Q
    |||||| |||||    
T  27811620 ggtgtgattttg 27811631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 89 - 196
Target Start/End: Original strand, 4731904 - 4732011
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| |||||||||||||||||| |||    ||||||| ||  ||||||||||||||||||||||||||||| |  ||||||||||||||    
T  4731904 attagatctaggtgctgttattgttgattattgtttgtgttcactttgatatcggttactactttcctttgctccacacatcattgtttgtattggtgtg 4732003  T
Q  189 gttttgag 196  Q
     |||||||    
T  4732004 attttgag 4732011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 89 - 196
Target Start/End: Complemental strand, 41366539 - 41366433
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||||||||||||||| |||||| |||     |||||| || |||||||||||||||||||||||||||||| || ||||||||||||||    
T  41366539 attagatctaggtgttgttattgttg-ttattgcttgtgtttactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtg 41366441  T
Q  189 gttttgag 196  Q
     |||||||    
T  41366440 attttgag 41366433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 89 - 196
Target Start/End: Original strand, 33352396 - 33352503
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    ||||||| ||||||||||||||||||||||||| |||    ||||||| || |||||| ||||||||||||||||||| ||| || ||| ||||||||||    
T  33352396 attagatttaggtgttgttattgttgattattgcttgtgttcactttgatattggttattactttcctttgctccacatatcataatttatattggtgtg 33352495  T
Q  189 gttttgag 196  Q
     |||||||    
T  33352496 attttgag 33352503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 132 - 213
Target Start/End: Original strand, 5689556 - 5689636
Alignment:
Q  132 ctttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtggttttgagatcggaatacacaacat 213  Q
    ||||| || |||||||||||||||||||||||||||||| || |||||||||||||| ||||||| ||||||| ||||||||    
T  5689556 ctttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtgattttgag-tcggaattcacaacat 5689636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 93 - 212
Target Start/End: Original strand, 4733956 - 4734075
Alignment:
Q  93 gatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatc-ttactttgtattggtgtggtt 191  Q
    ||||||||||||||||||||||||||||| |||    || |||| || |||||||||||||||||||||||||||||| ||  |||||||||||||  ||    
T  4733956 gatctaggtgttgttattgttgattattgcttgtgttcattttgatattggttactactttcctttgctccacacatcattggtttgtattggtgtaatt 4734055  T
Q  192 ttgagatcggaatacacaaca 212  Q
    |||| ||| |||| |||||||    
T  4734056 ttga-atccgaattcacaaca 4734075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 130 - 196
Target Start/End: Original strand, 6599252 - 6599318
Alignment:
Q  130 cactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtggttttgag 196  Q
    ||||||| || |||||||||||||||||||||| ||||||| || |||||||||||||| |||||||    
T  6599252 cactttgatattggttactactttcctttgctctacacatcatagtttgtattggtgtgattttgag 6599318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 130 - 196
Target Start/End: Original strand, 6674705 - 6674771
Alignment:
Q  130 cactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtggttttgag 196  Q
    ||||||| || |||||||||||||||||||||| ||||||| || |||||||||||||| |||||||    
T  6674705 cactttgatattggttactactttcctttgctctacacatcatagtttgtattggtgtgattttgag 6674771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 89 - 191
Target Start/End: Original strand, 25690204 - 25690308
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccac--tttgttag-tggttactactttcctttgctccacacatcttactttgtattggt 185  Q
    |||||||||||||| |||| ||||||||| ||| |||||| |||  |||||| | ||||||| ||| |||||||||||||||||| | ||||||||||||    
T  25690204 attagatctaggtggtgtt-ttgttgattcttgcttgcacacacactttgtttggtggttaccactctcctttgctccacacatcattctttgtattggt 25690302  T
Q  186 gtggtt 191  Q
    ||||||    
T  25690303 gtggtt 25690308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 131 - 196
Target Start/End: Complemental strand, 12702511 - 12702446
Alignment:
Q  131 actttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtggttttgag 196  Q
    |||||| || |||||||||||||||||||||||||||||| || ||||||||| |||| |||||||    
T  12702511 actttgatattggttactactttcctttgctccacacatcatagtttgtattgatgtgattttgag 12702446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 89 - 196
Target Start/End: Complemental strand, 18105997 - 18105891
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| ||||||||||| |||||| |||     |||||  || |||||||||||||||||||||| ||||||| || |||||||| |||||    
T  18105997 attagatctaggtgatgttattgttg-ttattgcttgtgtttactttaatattggttactactttcctttgctctacacatcatagtttgtattagtgtg 18105899  T
Q  189 gttttgag 196  Q
     |||||||    
T  18105898 attttgag 18105891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 141 - 196
Target Start/End: Original strand, 43036720 - 43036776
Alignment:
Q  141 tggttactactttcctttgctccacacatcttactttgtattggtgtg-gttttgag 196  Q
    |||||||||||||||||||||||||||||| |  |||||||||||||| ||||||||    
T  43036720 tggttactactttcctttgctccacacatcattttttgtattggtgtgagttttgag 43036776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 141 - 188
Target Start/End: Complemental strand, 3303541 - 3303494
Alignment:
Q  141 tggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    ||||||| |||||||||||||||||||||| || ||||||||||||||    
T  3303541 tggttaccactttcctttgctccacacatcatagtttgtattggtgtg 3303494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 188
Target Start/End: Complemental strand, 4743108 - 4743051
Alignment:
Q  131 actttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||| || ||||||| |||||||||||||||||||||  || ||||||||||||||    
T  4743108 actttggtattggttaccactttcctttgctccacacattatagtttgtattggtgtg 4743051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 89 - 213
Target Start/End: Original strand, 40321322 - 40321443
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||||||||||| ||| || ||| |||     |||||| || || || |||||||||||||||||||| ||| || |||||||| |||||    
T  40321322 attagatctaggtgttgttattattg-ttgttgcttgtgtttactttgatattgattgctactttcctttgctccacatatcatagtttgtatt-gtgtg 40321419  T
Q  189 gttttgagatcggaatacacaacat 213  Q
     ||||||| ||||||| ||||||||    
T  40321420 attttgag-tcggaattcacaacat 40321443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 212
Target Start/End: Complemental strand, 1345256 - 1345176
Alignment:
Q  131 actttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtggttttgagatcggaatacacaaca 212  Q
    |||||| || |||||||||||||||||||||||||| ||  |  |||||||| ||||| |||||| ||| |||| |||||||    
T  1345256 actttgatattggttactactttcctttgctccacagattattgtttgtatttgtgtgattttga-atccgaattcacaaca 1345176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 100; Significance: 4e-49; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 26178132 - 26178255
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||||||||||  |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  26178132 attagatctaggtgttgttatcattgattattgcttgcacacactttgttagtggttactactttcctttgctccacacatcttacttcgtattggtgtg 26178231  T
Q  189 gttttgagatcggaatacacaaca 212  Q
    |||||||||||||||| |||||||    
T  26178232 gttttgagatcggaattcacaaca 26178255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 18441563 - 18441441
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| |||| ||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18441563 attagatctaggtgctgtt-ttgttgattattgcttgcacacactttgttggtggttactactttcctttgctccacacatcttactttgtattggtgtg 18441465  T
Q  189 gttttgagatcggaatacacaaca 212  Q
    |||||||||||||||| |||||||    
T  18441464 gttttgagatcggaattcacaaca 18441441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 89 - 194
Target Start/End: Original strand, 16409725 - 16409830
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16409725 attagatctaggtgttgttattgttgattattgcttgcacccactttgttagtggttactactttcctttgctccacacatcatactttgtattggtgtg 16409824  T
Q  189 gttttg 194  Q
     |||||    
T  16409825 attttg 16409830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 9789143 - 9789021
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| |||| ||||||||| ||| |||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  9789143 attagatctaggtgctgtt-ttgttgatttttgcttgcacacactttgttggtggttactactttcctttgctccacacatcatactttgtattggtgtg 9789045  T
Q  189 gttttgagatcggaatacacaaca 212  Q
    |||||||||||||||| |||||||    
T  9789044 gttttgagatcggaattcacaaca 9789021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 89 - 204
Target Start/End: Original strand, 26171012 - 26171127
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||||||||||  | |||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  26171012 attagatctaggtgttgttatcatcgattattgcttgcacacactttgttagtgcttactactttcctttgctccacacatcttacttcgtattggtgtg 26171111  T
Q  189 gttttgagatcggaat 204  Q
    |||||||||| |||||    
T  26171112 gttttgagattggaat 26171127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 30182834 - 30182957
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    ||||||||||||||||||||||||||||||||| |||||  |||||||||| |||||||||||||||||||||||||||||| || ||||| ||||||||    
T  30182834 attagatctaggtgttgttattgttgattattgtttgcattcactttgttattggttactactttcctttgctccacacatcatagtttgttttggtgtg 30182933  T
Q  189 gttttgagatcggaatacacaaca 212  Q
     |||||||| |||||| |||||||    
T  30182934 attttgagaccggaattcacaaca 30182957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 89 - 193
Target Start/End: Complemental strand, 36073965 - 36073861
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| |||||||||||||||||| |||||  |||||||||| |||||| ||||||||||||||||||||||| || ||||||||||||||    
T  36073965 attagatctaggtgctgttattgttgattattgcttgcattcactttgttattggttattactttcctttgctccacacatcatagtttgtattggtgtg 36073866  T
Q  189 gtttt 193  Q
    |||||    
T  36073865 gtttt 36073861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 89 - 188
Target Start/End: Original strand, 13343306 - 13343405
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    ||||||||||||||||||||||||||||||||| |||||  |||||||||| |||||||||||||||||||||||||||||| || || ||||| |||||    
T  13343306 attagatctaggtgttgttattgttgattattgcttgcattcactttgttattggttactactttcctttgctccacacatcatagttcgtattagtgtg 13343405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 89 - 196
Target Start/End: Complemental strand, 30682845 - 30682737
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    ||||||||||||||||||||||||||||||||| |||    ||||||| || |||||||||||||||||||||||||||||| || ||||||||||||||    
T  30682845 attagatctaggtgttgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtg 30682746  T
Q  189 -gttttgag 196  Q
     ||||||||    
T  30682745 agttttgag 30682737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 89 - 187
Target Start/End: Complemental strand, 39468471 - 39468373
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgt 187  Q
    |||||||||||||| |||||||||||||||||| |||    ||||||| || |||||||||||||||||||||||||||||| || |||||||||||||    
T  39468471 attagatctaggtgctgttattgttgattattgtttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgt 39468373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 89 - 213
Target Start/End: Original strand, 25413006 - 25413130
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    ||||||| |||||| |||||||||||||||||| |||  | ||||| | || || |||||| |||||||||||||||||||| || || |||||||||||    
T  25413006 attagatataggtgctgttattgttgattattgcttgtgctcacttggatattgattactaatttcctttgctccacacatcatagttcgtattggtgtg 25413105  T
Q  189 gttttgagatcggaatacacaacat 213  Q
     |||||| | |||||| ||||||||    
T  25413106 attttgaaaccggaattcacaacat 25413130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 89 - 196
Target Start/End: Complemental strand, 42428352 - 42428245
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||||||||||| || ||| ||| |||    ||||||| || |||||||||||||||||||||||||||||| || ||||||||||||||    
T  42428352 attagatctaggtgttgttattatt-attgttgcttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtg 42428254  T
Q  189 -gttttgag 196  Q
     ||||||||    
T  42428253 agttttgag 42428245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 89 - 196
Target Start/End: Complemental strand, 5887356 - 5887250
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    ||||||| |||||||||||||| ||| || ||| |||    ||||||| || |||||||||||||||||||||||||| ||| || ||||||||||||||    
T  5887356 attagatttaggtgttgttattattg-ttgttgcttgtgttcactttgatattggttactactttcctttgctccacatatcatagtttgtattggtgtg 5887258  T
Q  189 gttttgag 196  Q
     |||||||    
T  5887257 attttgag 5887250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 130 - 213
Target Start/End: Complemental strand, 16649716 - 16649634
Alignment:
Q  130 cactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtggttttgagatcggaatacacaacat 213  Q
    ||||||| | ||||||||||||||||||||||||||||||| || ||||||||||| || ||||||| || |||| ||||||||    
T  16649716 cactttgattgtggttactactttcctttgctccacacatcatagtttgtattggtatgattttgagttc-gaattcacaacat 16649634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 8565829 - 8565764
Alignment:
Q  130 cactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtggttttga 195  Q
    |||||||||| |||||||||||||||||||||||||||||| || ||| |||| ||||| ||||||    
T  8565829 cactttgttattggttactactttcctttgctccacacatcatagtttatattagtgtgattttga 8565764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 141 - 196
Target Start/End: Complemental strand, 28750526 - 28750470
Alignment:
Q  141 tggttactactttcctttgctccacacatcttactttgtattggtgtg-gttttgag 196  Q
    |||||||||||||||||||||||||||||| || |||||||||||||| ||||||||    
T  28750526 tggttactactttcctttgctccacacatcataatttgtattggtgtgagttttgag 28750470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 89 - 196
Target Start/End: Complemental strand, 42426157 - 42426050
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||||||||||| |||||  ||| |||    ||||||| || |||||||||||||| ||||||||||||||| || |||||||| |||||    
T  42426157 attagatctaggtgttgttattattgatg-ttgcttgtgttcactttgatattggttactactttcttttgctccacacatcatagtttgtatttgtgtg 42426059  T
Q  189 -gttttgag 196  Q
     ||||||||    
T  42426058 agttttgag 42426050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 89 - 188
Target Start/End: Original strand, 13488447 - 13488545
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||||||||||| ||| | ||||||||    |||||||  | |||||| ||||||||||| ||||||||||| || ||||||||||||||    
T  13488447 attagatctaggtgttgttattattgct-attgattgtgttcactttgaaattggttattactttcctttactccacacatcatattttgtattggtgtg 13488545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 29720612 - 29720743
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattg--cacccactttgttag-tggttactactttcctttgctccacacatcttact--ttgtattg 183  Q
    |||||||||||||| |||| ||||||||||||| |||  ||| ||||||||| | ||||||| ||| |||||||||||||||| | || |  ||||||||    
T  29720612 attagatctaggtggtgtt-ttgttgattattgcttgtacacacactttgtttggtggttaccactctcctttgctccacacaacatatttcttgtattg 29720710  T
Q  184 gtgtggtt----ttgagatcggaatacacaaca 212  Q
    ||||||||    ||||||||||||| |||||||    
T  29720711 gtgtggttcgacttgagatcggaattcacaaca 29720743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 31183273 - 31183326
Alignment:
Q  143 gttactactttcctttgctccacacatcttactttgtattggtgtggttttgag 196  Q
    |||||||||||||||||||||||||||| |  |||||||||||||| |||||||    
T  31183273 gttactactttcctttgctccacacatcatggtttgtattggtgtgattttgag 31183326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 141 - 196
Target Start/End: Original strand, 534056 - 534112
Alignment:
Q  141 tggttactactttcctttgctccacacatcttactttgtattggtgtg-gttttgag 196  Q
    |||||||||||||||||||||||||||||| || ||| |||||||||| ||||||||    
T  534056 tggttactactttcctttgctccacacatcatagtttctattggtgtgagttttgag 534112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 132 - 188
Target Start/End: Complemental strand, 3075629 - 3075573
Alignment:
Q  132 ctttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    ||||| || |||||| ||||||||||||||||||||||| || ||||||||||||||    
T  3075629 ctttgatattggttattactttcctttgctccacacatcatagtttgtattggtgtg 3075573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 141 - 196
Target Start/End: Original strand, 13240049 - 13240104
Alignment:
Q  141 tggttactactttcctttgctccacacatcttactttgtattggtgtggttttgag 196  Q
    |||||||||||||||||| ||||||||||| || |||||||| ||||| |||||||    
T  13240049 tggttactactttcctttactccacacatcatagtttgtattagtgtgattttgag 13240104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 141 - 196
Target Start/End: Original strand, 33831976 - 33832031
Alignment:
Q  141 tggttactactttcctttgctccacacatcttactttgtattggtgtggttttgag 196  Q
    |||||||||||||||||||||||||||||| || |||||||| ||||  |||||||    
T  33831976 tggttactactttcctttgctccacacatcatagtttgtatttgtgtaattttgag 33832031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 89 - 213
Target Start/End: Original strand, 29722772 - 29722904
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattg--cacccactttgttag-tggttactactttcctttgctccacacatcttactt--tgtattg 183  Q
    |||||||||||||| |||| ||||||||||||| |||  ||| ||||||||| | ||||||| ||| | |||||||||||||| | || ||  |||||||    
T  29722772 attagatctaggtggtgtt-ttgttgattattgcttgtacacacactttgtttggtggttaccactctactttgctccacacaccatatttcttgtattg 29722870  T
Q  184 gtgtggtt----ttgagatcggaatacacaacat 213  Q
    ||||||||    ||||||||||||| ||||||||    
T  29722871 gtgtggttcgacttgagatcggaattcacaacat 29722904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 141 - 186
Target Start/End: Original strand, 19806660 - 19806705
Alignment:
Q  141 tggttactactttcctttgctccacacatcttactttgtattggtg 186  Q
    |||||||||||||||||||| ||||||||| || ||||||||||||    
T  19806660 tggttactactttcctttgccccacacatcatagtttgtattggtg 19806705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 32637123 - 32637168
Alignment:
Q  143 gttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||||| ||||||||||| || ||||||||||||||    
T  32637123 gttactactttcctttactccacacatcatagtttgtattggtgtg 32637168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 141 - 196
Target Start/End: Original strand, 538318 - 538374
Alignment:
Q  141 tggttactactttcctttgctccacacatcttactttgtattggtgtg-gttttgag 196  Q
    |||||| ||||||||||||||||||||||| || ||| |||||||||| ||||||||    
T  538318 tggttattactttcctttgctccacacatcatagtttatattggtgtgagttttgag 538374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 191
Target Start/End: Complemental strand, 22536210 - 22536108
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttg--ttagtggttactactttcctttgctccacacatcttactttgtattggtg 186  Q
    |||||||||||||||| ||  |||||||| ||| |||||  |||||||  || ||||||||  || ||| | |||||||||||| | |||||||||||||    
T  22536210 attagatctaggtgttttt--tgttgattgttgcttgcatacactttgctttggtggttaccgctctccgtcgctccacacatcattctttgtattggtg 22536113  T
Q  187 tggtt 191  Q
    |||||    
T  22536112 tggtt 22536108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 191
Target Start/End: Complemental strand, 29751079 - 29750973
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccac---tttgttagtggttactactttcctttgctccacacatcttact--ttgtattg 183  Q
    |||| ||||||||| |||| ||||||||||||| |||||| |||   ||  || |||||||| ||| |||||||||||||||||| || |  ||||||||    
T  29751079 attatatctaggtggtgtt-ttgttgattattgcttgcacacacacattgtttggtggttaccactctcctttgctccacacatcatatttcttgtattg 29750981  T
Q  184 gtgtggtt 191  Q
    ||||||||    
T  29750980 gtgtggtt 29750973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 1e-39; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 2171449 - 2171326
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||    
T  2171449 attagatctaggtgctgttattgttgattattgcttgcacacactttgttagtggttactactttcctttgctccacacatcatagttcgtattggtgtg 2171350  T
Q  189 gttttgagatcggaatacacaaca 212  Q
      ||||||| |||||| |||||||    
T  2171349 actttgagaccggaattcacaaca 2171326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 16452250 - 16452127
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| |||||||||||||||||| ||| |  |||||||||| |||||||||||||||||| ||||||||||| || || |||||||||||    
T  16452250 attagatctaggtgatgttattgttgattattgcttgtattcactttgttattggttactactttcctttactccacacatcatagttcgtattggtgtg 16452151  T
Q  189 gttttgagatcggaatacacaaca 212  Q
     ||||||||||||||| |||||||    
T  16452150 attttgagatcggaattcacaaca 16452127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 5408992 - 5408869
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    ||||||||||||||||||||||||||||||||| |||  | ||||||| || |||||||||||||||||||||||||||||| || ||||||||||||||    
T  5408992 attagatctaggtgttgttattgttgattattgcttgtgctcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtg 5408893  T
Q  189 gttttgagatcggaatacacaaca 212  Q
      |||||||  ||||| |||||||    
T  5408892 actttgagactggaattcacaaca 5408869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 5413317 - 5413194
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    ||||||||||||||||||||||||||||||||| |||  | ||||||| || |||||||||||||||||||||||||||||| || ||||||||||||||    
T  5413317 attagatctaggtgttgttattgttgattattgcttgtgctcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtg 5413218  T
Q  189 gttttgagatcggaatacacaaca 212  Q
      |||||||  ||||| |||||||    
T  5413217 actttgagactggaattcacaaca 5413194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 30834456 - 30834333
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| |||||||||||||||||| |||||  |||||||||| ||||||||| |||||||||||||||||||| || || |||||||||||    
T  30834456 attagatctaggtgctgttattgttgattattgcttgcattcactttgttattggttactattttcctttgctccacacatcatatttcgtattggtgtg 30834357  T
Q  189 gttttgagatcggaatacacaaca 212  Q
     |||||||| || ||| |||||||    
T  30834356 attttgagaccgaaattcacaaca 30834333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 89 - 213
Target Start/End: Complemental strand, 3072679 - 3072551
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||| ||| | || ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||    
T  3072679 attagatctatgtgctatttttgttgattattgcttgcacacactttgttagtggttactactttcctttgctccacacatcatatttcgtattggtgtg 3072580  T
Q  189 ----gttttgagatcggaatacacaacat 213  Q
        | |||||||||||||| ||||||||    
T  3072579 acacgatttgagatcggaattcacaacat 3072551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 9182953 - 9182857
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggt 185  Q
    ||||||||||||||||||||||||||||||||| |||    ||||||| || |||||||||||||||||||||||||||||| || |||||||||||    
T  9182953 attagatctaggtgttgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggt 9182857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 89 - 192
Target Start/End: Complemental strand, 6097369 - 6097266
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||| ||||| |||| ||||||||||| | |||||| |||||||||||||||||||||||||| |||||||||||||| | ||||| || ||||||    
T  6097369 attagatcaaggtgctgtttttgttgattatagcttgcacacactttgttagtggttactactttccgttgctccacacatcattctttgcatcggtgtg 6097270  T
Q  189 gttt 192  Q
    ||||    
T  6097269 gttt 6097266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 89 - 193
Target Start/End: Complemental strand, 31404597 - 31404493
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| |||||||||||||||||| |||  | ||||||| || || |||||| |||||||||||||||||||| || || ||||||| |||    
T  31404597 attagatctaggtgctgttattgttgattattgcttgtgctcactttgatattgattactattttcctttgctccacacatcatagttcgtattggagtg 31404498  T
Q  189 gtttt 193  Q
     ||||    
T  31404497 atttt 31404493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 123 - 192
Target Start/End: Original strand, 412368 - 412438
Alignment:
Q  123 ttgcacccactttgttag-tggttactactttcctttgctccacacatcttactttgtattggtgtggttt 192  Q
    |||||| ||||||||| | |||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  412368 ttgcacacactttgtttggtggttactactttcctttgctccacacatcatacttggtattggtgtggttt 412438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 89 - 197
Target Start/End: Complemental strand, 28137332 - 28137225
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||| ||||||||||||| | |||||| |||     |||||| || ||||||||||||||||||||||||||| || || ||||||||||||||    
T  28137332 attagatctatgtgttgttattgtcg-ttattgcttgtgtttactttgatattggttactactttcctttgctccacacgtcatagtttgtattggtgtg 28137234  T
Q  189 gttttgaga 197  Q
     ||||||||    
T  28137233 attttgaga 28137225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 196
Target Start/End: Complemental strand, 26954161 - 26954106
Alignment:
Q  141 tggttactactttcctttgctccacacatcttactttgtattggtgtggttttgag 196  Q
    |||||||||||||| ||||||||||||||| || |||||||||||||| |||||||    
T  26954161 tggttactactttcttttgctccacacatcatagtttgtattggtgtgattttgag 26954106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 89 - 191
Target Start/End: Original strand, 27648102 - 27648205
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccac--tttgttag-tggttactactttcctttgctccacacatcttactttgtattggt 185  Q
    |||||||||||||| |||| ||||||||||||| |||||| |||  |||||| | ||||||| ||| |||||||||||||||||| | | ||||||||||    
T  27648102 attagatctaggtggtgtt-ttgttgattattgcttgcacacacactttgttcggtggttaccactctcctttgctccacacatcattc-ttgtattggt 27648199  T
Q  186 gtggtt 191  Q
    ||||||    
T  27648200 gtggtt 27648205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 107 - 212
Target Start/End: Complemental strand, 5406107 - 5406002
Alignment:
Q  107 tattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtggttttgagatcggaatac 206  Q
    |||| |||||||||| |||  | ||||||  || ||||||||||||| |||| ||||||||||| || ||||||||||||||  ||| ||| |||||| |    
T  5406107 tattattgattattgcttgtgctcactttaatattggttactacttttctttactccacacatcatagtttgtattggtgtgactttaagaccggaattc 5406008  T
Q  207 acaaca 212  Q
    ||||||    
T  5406007 acaaca 5406002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 107 - 212
Target Start/End: Complemental strand, 5410432 - 5410327
Alignment:
Q  107 tattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtggttttgagatcggaatac 206  Q
    |||| |||||||||| |||  | ||||||  || ||||||||||||| |||| ||||||||||| || ||||||||||||||  ||| ||| |||||| |    
T  5410432 tattattgattattgcttgtgctcactttaatattggttactacttttctttactccacacatcatagtttgtattggtgtgactttaagaccggaattc 5410333  T
Q  207 acaaca 212  Q
    ||||||    
T  5410332 acaaca 5410327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 89 - 191
Target Start/End: Original strand, 16555120 - 16555223
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttag-tggttactactttcctttgctccacacatc-ttactttgtattggtg 186  Q
    |||||||||||||| |||| |||||| || ||| |||||| ||||||||| | ||||||| ||| ||||| |||||||||||| ||| || |||||||||    
T  16555120 attagatctaggtggtgtt-ttgttgtttgttgcttgcacacactttgtttggtggttaccactctccttggctccacacatcattatttagtattggtg 16555218  T
Q  187 tggtt 191  Q
    |||||    
T  16555219 tggtt 16555223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 89 - 191
Target Start/End: Complemental strand, 16578435 - 16578332
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttag-tggttactactttcctttgctccacacatc-ttactttgtattggtg 186  Q
    |||||||||||||| |||| |||||| || ||| |||||| ||||||||| | ||||||| ||| ||||| |||||||||||| ||| || |||||||||    
T  16578435 attagatctaggtggtgtt-ttgttgtttgttgcttgcacacactttgtttggtggttaccactctccttggctccacacatcattatttagtattggtg 16578337  T
Q  187 tggtt 191  Q
    |||||    
T  16578336 tggtt 16578332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 89 - 191
Target Start/End: Original strand, 16616945 - 16617048
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttag-tggttactactttcctttgctccacacatc-ttactttgtattggtg 186  Q
    |||||||||||||| |||| |||||| || ||| |||||| ||||||||| | ||||||| ||| ||||| |||||||||||| ||| || |||||||||    
T  16616945 attagatctaggtggtgtt-ttgttgtttgttgcttgcacacactttgtttggtggttaccactctccttggctccacacatcattatttagtattggtg 16617043  T
Q  187 tggtt 191  Q
    |||||    
T  16617044 tggtt 16617048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 89 - 191
Target Start/End: Original strand, 16631676 - 16631779
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttag-tggttactactttcctttgctccacacatc-ttactttgtattggtg 186  Q
    |||||||||||||| |||| |||||| || ||| |||||| ||||||||| | ||||||| ||| ||||| |||||||||||| ||| || |||||||||    
T  16631676 attagatctaggtggtgtt-ttgttgtttgttgcttgcacacactttgtttggtggttaccactctccttggctccacacatcattatttagtattggtg 16631774  T
Q  187 tggtt 191  Q
    |||||    
T  16631775 tggtt 16631779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 89 - 191
Target Start/End: Original strand, 16653363 - 16653466
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttag-tggttactactttcctttgctccacacatc-ttactttgtattggtg 186  Q
    |||||||||||||| |||| |||||| || ||| |||||| ||||||||| | ||||||| ||| ||||| |||||||||||| ||| || |||||||||    
T  16653363 attagatctaggtggtgtt-ttgttgtttgttgcttgcacacactttgtttggtggttaccactctccttggctccacacatcattatttagtattggtg 16653461  T
Q  187 tggtt 191  Q
    |||||    
T  16653462 tggtt 16653466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 132 - 196
Target Start/End: Complemental strand, 3038806 - 3038742
Alignment:
Q  132 ctttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtggttttgag 196  Q
    ||||| || |||||| ||||||||||||||| ||||||| || ||||||||||| || |||||||    
T  3038806 ctttgatattggttattactttcctttgctcgacacatcatagtttgtattggtctgattttgag 3038742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 141 - 185
Target Start/End: Complemental strand, 33160221 - 33160177
Alignment:
Q  141 tggttactactttcctttgctccacacatcttactttgtattggt 185  Q
    ||||||||| |||||||||||||||||||| || |||||||||||    
T  33160221 tggttactattttcctttgctccacacatcatagtttgtattggt 33160177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 213
Target Start/End: Complemental strand, 22963568 - 22963507
Alignment:
Q  152 ttcctttgctccacacatcttactttgtattggtgtggttttgagatcggaatacacaacat 213  Q
    |||||| |||||||||||| || |||||||||||||| |||||||   ||||| ||||||||    
T  22963568 ttccttagctccacacatcatagtttgtattggtgtgattttgagtctggaattcacaacat 22963507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 213
Target Start/End: Original strand, 23824825 - 23824886
Alignment:
Q  152 ttcctttgctccacacatcttactttgtattggtgtggttttgagatcggaatacacaacat 213  Q
    |||||| |||||||||||| || |||||||||||||| |||||||   ||||| ||||||||    
T  23824825 ttccttagctccacacatcatagtttgtattggtgtgattttgagtctggaattcacaacat 23824886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 141 - 177
Target Start/End: Complemental strand, 9182860 - 9182824
Alignment:
Q  141 tggttactactttcctttgctccacacatcttacttt 177  Q
    |||||||||||||||||| ||||||||||| ||||||    
T  9182860 tggttactactttcctttactccacacatcatacttt 9182824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 82; Significance: 2e-38; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 89 - 194
Target Start/End: Complemental strand, 11081 - 10976
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| || | |||||||||||||||||||||||||| ||| |||||||||||||||||    
T  11081 attagatctaggtgttgttattgttgattattgcttgcacccacttagtcattggttactactttcctttgctccacatatcatactttgtattggtgtg 10982  T
Q  189 gttttg 194  Q
    ||||||    
T  10981 gttttg 10976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 89 - 194
Target Start/End: Complemental strand, 8655 - 8550
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| || | |||||||||||||||||||||||||  ||| |||||||||||||||||    
T  8655 attagatctaggtgttgttattgttgattattgcttgcacccacttagtcattggttactactttcctttgctccacgtatcatactttgtattggtgtg 8556  T
Q  189 gttttg 194  Q
    ||||||    
T  8555 gttttg 8550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 3e-37; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 85 - 212
Target Start/End: Complemental strand, 5260249 - 5260122
Alignment:
Q  85 ctaaattagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattgg 184  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||| || || |||||||    
T  5260249 ctaaattagatctaggtgttgttattgttgattattgcttgcactcactttgttattggttactactttcctttgctccacacatcatagttcgtattgg 5260150  T
Q  185 tgtggttttgagatcggaatacacaaca 212  Q
    | ||  ||||||| | |||| |||||||    
T  5260149 tttgactttgagaccagaattcacaaca 5260122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 89 - 194
Target Start/End: Complemental strand, 23200058 - 23199954
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||||| |||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||    
T  23200058 attagatctaggtgtt-ttattgttgattattgcttgcactcactttgttattggttactactttcctttgctccacatatcatactttgtattggtgtg 23199960  T
Q  189 gttttg 194  Q
    ||||||    
T  23199959 gttttg 23199954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 5258066 - 5257943
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| |||||||||||||||||| |||||  |||||||||| |||||||||||||||||||||||||||||| || || |||||||||||    
T  5258066 attagatctaggtgctgttattgttgattattgcttgcattcactttgttattggttactactttcctttgctccacacatcatagttcgtattggtgtg 5257967  T
Q  189 gttttgagatcggaatacacaaca 212  Q
      ||||||| |||||| |||||||    
T  5257966 actttgagaccggaattcacaaca 5257943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 89 - 194
Target Start/End: Complemental strand, 7779923 - 7779818
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| |||| ||||||||||||| |||||| ||||||||| |||||||| ||| |||||||||||||||||||||||| |||||||||||    
T  7779923 attagatctaggtgctgtttttgttgattattgcttgcacacactttgttggtggttaccactctcctttgctccacacatcttacttcgtattggtgtg 7779824  T
Q  189 gttttg 194  Q
    ||||||    
T  7779823 gttttg 7779818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 9636046 - 9635923
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| |||||||||||||||||| |||    ||||||| || |||||||||||||||||||||||||||||| || ||||||||||||||    
T  9636046 attagatctaggtgctgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtg 9635947  T
Q  189 gttttgagatcggaatacacaaca 212  Q
     |||||||| |||||| |||||||    
T  9635946 attttgagaccggaattcacaaca 9635923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 801335 - 801463
Alignment:
Q  89 attagatctaggtgttgttatt-gttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgt 187  Q
    |||||||||||||| |||| || ||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||| || || ||||||||||    
T  801335 attagatctaggtgctgttttttgttgattattgcttgcacacactttattagtggttactactttcctttgctccacacatcatatttcgtattggtgt 801434  T
Q  188 g----gttttgagatcggaatacacaaca 212  Q
    |    |||||||||||||||| |||||||    
T  801435 gacacgttttgagatcggaattcacaaca 801463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 7762508 - 7762619
Alignment:
Q  85 ctaaattagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattgg 184  Q
    ||||||||||||||||||||||||||||||||||||  |||    ||||||| || |||||||||||||||||||||||||||||| || ||||||||||    
T  7762508 ctaaattagatctaggtgttgttattgttgattattacttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattgg 7762607  T
Q  185 tgtggttttgag 196  Q
    ||| ||||||||    
T  7762608 tgtagttttgag 7762619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 9581529 - 9581652
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| |||||||||||||||||| |||  | ||||||| || ||||||||||||||||||||| |||||||| || ||| ||||||||||    
T  9581529 attagatctaggtgctgttattgttgattattgcttgtgctcactttgatattggttactactttcctttgcttcacacatcatagtttatattggtgtg 9581628  T
Q  189 gttttgagatcggaatacacaaca 212  Q
     |||||||  |||||| |||||||    
T  9581629 attttgagtccggaattcacaaca 9581652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 9634743 - 9634621
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| |||||||||||||||||| |||    ||||||| || |||||||||||||||||||||||||| ||| || ||||||||||||||    
T  9634743 attagatctaggtgctgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctccaca-atcatagtttgtattggtgtg 9634645  T
Q  189 gttttgagatcggaatacacaaca 212  Q
     |||||||| |||||| |||||||    
T  9634644 attttgagaccggaattcacaaca 9634621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 19683810 - 19683687
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| |||||||||||||||||| |||    ||||||| || |||||||||||||||||||||||| ||||| || ||||||||||||||    
T  19683810 attagatctaggtgctgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctccaaacatcatagtttgtattggtgtg 19683711  T
Q  189 gttttgagatcggaatacacaaca 212  Q
      ||||||| |||||| |||||||    
T  19683710 agtttgagaccggaattcacaaca 19683687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 89 - 195
Target Start/End: Original strand, 40735628 - 40735734
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| |||||||||||||||||| |||    ||||||| || |||||||||||||||||||||||||||||| || ||||||||||||||    
T  40735628 attagatctaggtgctgttattgttgattattgtttgtgttcactttgatattggttactactttcctttgctccacacatcataatttgtattggtgtg 40735727  T
Q  189 gttttga 195  Q
     ||||||    
T  40735728 attttga 40735734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 89 - 214
Target Start/End: Original strand, 7764711 - 7764836
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| |||||||||||||||||| |||    ||||||| || |||||||||||||||||| || |||||||| || |||||||||||||     
T  7764711 attagatctaggtgctgttattgttgattattgcttgtgttcactttgatattggttactactttcctttacttcacacatcatagtttgtattggtgta 7764810  T
Q  189 gttttgagatcggaatacacaacatg 214  Q
    ||||||||  |||||| |||||||||    
T  7764811 gttttgagtccggaattcacaacatg 7764836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 89 - 188
Target Start/End: Original strand, 37408705 - 37408804
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| |||||||||||||||||| |||  | ||||||  || |||||||||||||||||||||||||||||| || ||||||||| ||||    
T  37408705 attagatctaggtgctgttattgttgattattgtttgtgctcactttaatattggttactactttcctttgctccacacatcatattttgtattgatgtg 37408804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 89 - 194
Target Start/End: Original strand, 45095409 - 45095514
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||| ||| |||||||||||||||||| |||  | ||||||| || |||||||||||||||||||||| ||||||| || ||||||||| ||||    
T  45095409 attagatctatgtgctgttattgttgattattgcttgtgctcactttgatattggttactactttcctttgctctacacatcatagtttgtattgatgtg 45095508  T
Q  189 gttttg 194  Q
     |||||    
T  45095509 attttg 45095514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 89 - 196
Target Start/End: Original strand, 29813307 - 29813415
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| |||||||||||||||||| |||    ||||||| || | ||||||||||| |||||||||||||||| || ||||||||||||||    
T  29813307 attagatctaggtgctgttattgttgattattgtttgtgttcactttgatattagttactacttttctttgctccacacatcatagtttgtattggtgtg 29813406  T
Q  189 -gttttgag 196  Q
     ||||||||    
T  29813407 agttttgag 29813415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 89 - 197
Target Start/End: Original strand, 40734743 - 40734851
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| ||||||| || ||||||  |||    ||||||| || |||||||||||||||||||||||||||||| || ||||||||||||||    
T  40734743 attagatctaggtgctgttattttttattatttcttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtg 40734842  T
Q  189 gttttgaga 197  Q
     ||||||||    
T  40734843 attttgaga 40734851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 89 - 194
Target Start/End: Complemental strand, 23197859 - 23197761
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||| ||||| |||||||||||||||| ||||      ||| ||| |||||||||||||||||||||||||| ||| |||||||||||||||||    
T  23197859 attagatctatgtgtt-ttattgttgattattgcttgc------tttattattggttactactttcctttgctccacatatcatactttgtattggtgtg 23197767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 89 - 196
Target Start/End: Original strand, 29811114 - 29811222
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| |||||||||||||||||| |||    | |||||  | |||||||||||||||||||||||||| ||| || ||||||||||||||    
T  29811114 attagatctaggtgctgttattgttgattattgcttgtgttctctttgaaattggttactactttcctttgctccacaaatcatattttgtattggtgtg 29811213  T
Q  189 -gttttgag 196  Q
     ||||||||    
T  29811214 agttttgag 29811222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 89 - 196
Target Start/End: Complemental strand, 22834928 - 22834822
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||||||||||||||| |||||   ||     |||||| || |||||||||||||||||||||||||||||| || ||||||||||||||    
T  22834928 attagatctaggtgttgttattgttg-ttattacctgtgtttactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtg 22834830  T
Q  189 gttttgag 196  Q
     |||||||    
T  22834829 attttgag 22834822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 89 - 196
Target Start/End: Original strand, 51399060 - 51399167
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| |||||||||||||||||| | |  | ||||||| || || || |||||||||||||||||| ||||| || ||||||||||| ||    
T  51399060 attagatctaggtgctgttattgttgattattgctagtgctcactttgatattgttttctactttcctttgctccatacatcatagtttgtattggtatg 51399159  T
Q  189 gttttgag 196  Q
     |||||||    
T  51399160 attttgag 51399167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 89 - 188
Target Start/End: Original strand, 761091 - 761189
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| || |||||||| |||||| |||    ||||||| |  |||||||||||||||||||||||||||||| || ||||||||||||||    
T  761091 attagatctaggtgctgctattgttg-ttattgcttgagttcactttgattttggttactactttcctttgctccacacatcatagtttgtattggtgtg 761189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 132 - 196
Target Start/End: Complemental strand, 9666349 - 9666285
Alignment:
Q  132 ctttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtggttttgag 196  Q
    ||||| || |||||||||||||||||||||||||| ||| || |||||||||||||| |||||||    
T  9666349 ctttgatattggttactactttcctttgctccacagatcatagtttgtattggtgtgattttgag 9666285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 132 - 188
Target Start/End: Complemental strand, 29196269 - 29196213
Alignment:
Q  132 ctttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    ||||| || |||||||||||||||||||||||||||||| || ||||||||||||||    
T  29196269 ctttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtg 29196213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 141 - 196
Target Start/End: Complemental strand, 39153235 - 39153179
Alignment:
Q  141 tggttactactttcctttgctccacacatcttactttgtattggtgtg-gttttgag 196  Q
    |||||||||||||||||||||||||||||| || |||||||||||||| ||||||||    
T  39153235 tggttactactttcctttgctccacacatcatagtttgtattggtgtgagttttgag 39153179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 89 - 196
Target Start/End: Complemental strand, 5236379 - 5236272
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||| | | |||||||||||||||| |||    ||||||| ||  | ||||||||||||| | ||||||||||| || ||||||||||||||    
T  5236379 attagatctaggagctcttattgttgattattgcttgtgttcactttgatatcgattactactttcctgtactccacacatcatagtttgtattggtgtg 5236280  T
Q  189 gttttgag 196  Q
     |||||||    
T  5236279 attttgag 5236272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 193
Target Start/End: Original strand, 29682604 - 29682706
Alignment:
Q  90 ttagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtgg 189  Q
    ||||||||||||| || |||||||| |||||| ||| |  ||||||  |  || ||||||||||||||||||||||||||| || ||||||||||||||     
T  29682604 ttagatctaggtgctgctattgttg-ttattgcttgtattcactttaattttgattactactttcctttgctccacacatcatagtttgtattggtgtga 29682702  T
Q  190 tttt 193  Q
    ||||    
T  29682703 tttt 29682706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 89 - 188
Target Start/End: Original strand, 54635373 - 54635475
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccac--tttgttag-tggttactactttcctttgctccacacatc-ttactttgtattgg 184  Q
    |||||||||||||| |||| ||||||||||||| |||||| |||  |||||| | ||||||| ||| |||||||||||||||||| ||| || |||||||    
T  54635373 attagatctaggtggtgtt-ttgttgattattgcttgcacacacactttgtttggtggttaccactctcctttgctccacacatcattatttagtattgg 54635471  T
Q  185 tgtg 188  Q
    ||||    
T  54635472 tgtg 54635475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 141 - 196
Target Start/End: Original strand, 16499312 - 16499367
Alignment:
Q  141 tggttactactttcctttgctccacacatcttactttgtattggtgtggttttgag 196  Q
    |||||||||||||||||||||||||||||  || ||||||||| |||| |||||||    
T  16499312 tggttactactttcctttgctccacacattatagtttgtattgatgtgattttgag 16499367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 89 - 188
Target Start/End: Complemental strand, 23391834 - 23391736
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||||||||||| ||| || ||  |||    ||||||| || |||||| ||||||||||| ||||||||||| || ||||||||||||||    
T  23391834 attagatctaggtgttgttattattg-ttgtttcttgtgttcactttgatattggttattactttccttttctccacacatcatagtttgtattggtgtg 23391736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 141 - 188
Target Start/End: Original strand, 37406987 - 37407034
Alignment:
Q  141 tggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||||||||||||||||||| || |||||| |||||||    
T  37406987 tggttactactttcctttgctccacacatcatattttgtagtggtgtg 37407034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 89 - 196
Target Start/End: Complemental strand, 44700405 - 44700299
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||||||||||| ||| || ||| |||     |||||| || ||||||||||||| ||||||||||  |||| || ||||||||||||||    
T  44700405 attagatctaggtgttgttattattg-ttgttgcttgtgtttactttgatattggttactacttttctttgctccatgcatcatagtttgtattggtgtg 44700307  T
Q  189 gttttgag 196  Q
     |||||||    
T  44700306 attttgag 44700299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 89 - 191
Target Start/End: Original strand, 6716749 - 6716854
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattg--cacccactttg-ttagtggttactactttcctttgctccacacatcttactttgtattggt 185  Q
    |||||||||||||| |||| | ||||||||||| |||  ||| ||||||| || ||||||||  |||||| ||||||||||||||   ||||| ||||||    
T  6716749 attagatctaggtggtgttttggttgattattgcttgcacacacactttgtttggtggttaccgctttccgttgctccacacatcactctttgcattggt 6716848  T
Q  186 gtggtt 191  Q
    ||||||    
T  6716849 gtggtt 6716854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 196
Target Start/End: Complemental strand, 27305597 - 27305534
Alignment:
Q  131 actttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtggttttgag 196  Q
    |||||| || |||||||||||||||||||||||||||||| || ||  |||||||||| |||||||    
T  27305597 actttgatattggttactactttcctttgctccacacatcatagtt--tattggtgtgattttgag 27305534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 89 - 191
Target Start/End: Original strand, 45283236 - 45283340
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacc--cactttgttag-tggttactactttcctttgctccacacatcttactttgtattggt 185  Q
    |||||||||||||| |||| ||||||||||||| ||||||   ||||||||| | |||||||  || ||| | |||||||||||| | ||||||||||||    
T  45283236 attagatctaggtggtgtt-ttgttgattattgcttgcacaaacactttgtttggtggttaccgctctccgtcgctccacacatcattctttgtattggt 45283334  T
Q  186 gtggtt 191  Q
    ||||||    
T  45283335 gtggtt 45283340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 2074952 - 2074900
Alignment:
Q  141 tggttactactttcctttgctccacacatcttactttgtattggtgtggttttg 194  Q
    |||||||||||||||||||||||||||||| || ||| |||||||||| |||||    
T  2074952 tggttactactttcctttgctccacacatcatagttt-tattggtgtgattttg 2074900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 31314740 - 31314793
Alignment:
Q  143 gttactactttcctttgctccacacatcttactttgtattggtgtggttttgag 196  Q
    |||| ||||||||||||||||| ||||| || |||||||||||||| |||||||    
T  31314740 gttattactttcctttgctccatacatcatagtttgtattggtgtgattttgag 31314793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 21350891 - 21350850
Alignment:
Q  131 actttgttagtggttactactttcctttgctccacacatctt 172  Q
    |||||| || ||||||||||||||||||||| ||||||||||    
T  21350891 actttgatattggttactactttcctttgcttcacacatctt 21350850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 23410200 - 23410155
Alignment:
Q  143 gttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    ||||||||||||||||| |||||||||| || ||||||||| ||||    
T  23410200 gttactactttcctttgatccacacatcatagtttgtattgatgtg 23410155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 170
Target Start/End: Original strand, 32891388 - 32891417
Alignment:
Q  141 tggttactactttcctttgctccacacatc 170  Q
    ||||||||||||||||||||||||||||||    
T  32891388 tggttactactttcctttgctccacacatc 32891417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 79; Significance: 1e-36; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 94 - 212
Target Start/End: Original strand, 11817 - 11935
Alignment:
Q  94 atctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtggtttt 193  Q
    ||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||  |||    
T  11817 atctaggtgctgttattgttgattattgcttgcacacactttgttagtggttactactttcctttgctccacacatcatagttcgtattggtgtgacttt 11916  T
Q  194 gagatcggaatacacaaca 212  Q
    |||| |||||| |||||||    
T  11917 gagaccggaattcacaaca 11935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 2e-32; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 188
Target Start/End: Original strand, 48409053 - 48409152
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| |||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||| || || |||||||||||    
T  48409053 attagatctaggtgctgttattgttgattattgcttgcactcactttgttattggttactactttcctttgctccacacatcatatttcgtattggtgtg 48409152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 89 - 188
Target Start/End: Original strand, 4179019 - 4179118
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| |||||||||||||||||| || ||  |||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||    
T  4179019 attagatctaggtgctgttattgttgattattgcttacattcactttgttattggttactactttcctttgctccacacatcatagtttgtattggtgtg 4179118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 25766879 - 25766757
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| |||||||||||||||||| |||| | |||||||||| ||||||||||||| |||||||||||||||| || || ||||||||||     
T  25766879 attagatctaggtgctgttattgttgattattgcttgcgctcactttgttattggttactacttttctttgctccacacatcatatttcgtattggtgt- 25766781  T
Q  189 gttttgagatcggaatacacaaca 212  Q
    | ||||||| |||||| |||||||    
T  25766780 gatttgagaccggaattcacaaca 25766757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 29991299 - 29991422
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    ||||||||||||||||||||||||||||||||  |||  | ||||||| || ||||||||||||| |||||||||||||||| || ||||||||||||||    
T  29991299 attagatctaggtgttgttattgttgattattacttgtgctcactttgatattggttactacttttctttgctccacacatcatagtttgtattggtgtg 29991398  T
Q  189 gttttgagatcggaatacacaaca 212  Q
      ||||||| |||||| |||||||    
T  29991399 actttgagaacggaattcacaaca 29991422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 89 - 194
Target Start/End: Original strand, 39731617 - 39731723
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttg-tattggtgt 187  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||| |  ||| ||| ||||||| |||||||||    
T  39731617 attagatctaggtgttgttattgttgattattgcttgcacccactttgttattggttactacttttctttgttttacatatcatactttgttattggtgt 39731716  T
Q  188 ggttttg 194  Q
    |||||||    
T  39731717 ggttttg 39731723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 89 - 196
Target Start/End: Original strand, 23555287 - 23555395
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    ||||||||||||||||||||||||||||||||| |||    ||||||| || |||||||||||||||||||||||||||||| || ||||||||||||||    
T  23555287 attagatctaggtgttgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtg 23555386  T
Q  189 -gttttgag 196  Q
     ||||||||    
T  23555387 agttttgag 23555395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 89 - 196
Target Start/End: Original strand, 25616101 - 25616208
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    ||||||||||||||||||||||||||||||||| |||    ||||||| || |||||||||||||||||||||||| ||||| || ||||||||||||||    
T  25616101 attagatctaggtgttgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctccatacatcatagtttgtattggtgtg 25616200  T
Q  189 gttttgag 196  Q
     |||||||    
T  25616201 attttgag 25616208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 35854162 - 35854285
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| |||||||||||||||||| |||    ||||||| || |||||||||||||||||||||||||||||| || |||||||| |||||    
T  35854162 attagatctaggtgctgttattgttgattattgtttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtatttgtgtg 35854261  T
Q  189 gttttgagatcggaatacacaaca 212  Q
     ||||||||  ||||| |||||||    
T  35854262 attttgagactggaattcacaaca 35854285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 89 - 196
Target Start/End: Original strand, 27348063 - 27348170
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| |||||||||||||||||| |||    ||||||| || ||||| |||||||||||||||||||||||| || |||||||| |||||    
T  27348063 attagatctaggtgctgttattgttgattattgtttgtgttcactttgatattggttgctactttcctttgctccacacatcataatttgtatttgtgtg 27348162  T
Q  189 gttttgag 196  Q
     |||||||    
T  27348163 attttgag 27348170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 89 - 196
Target Start/End: Original strand, 48489677 - 48489784
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    ||||||||||||||||||||||||||||||||| |      ||||||| || |||||||||||||||||||||||||||||| || || |||||||||||    
T  48489677 attagatctaggtgttgttattgttgattattgctcatgttcactttgatattggttactactttcctttgctccacacatcatagttggtattggtgtg 48489776  T
Q  189 gttttgag 196  Q
     |||||||    
T  48489777 attttgag 48489784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 89 - 196
Target Start/End: Original strand, 18126892 - 18127000
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||||||||||| |||||||||| |||    ||||||| || || ||||||||||||||| ||||||||||| || ||||||||||||||    
T  18126892 attagatctaggtgttgttattcttgattattgcttgtgttcactttgatattgattactactttcctttactccacacatcatagtttgtattggtgtg 18126991  T
Q  189 -gttttgag 196  Q
     ||||||||    
T  18126992 agttttgag 18127000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 89 - 194
Target Start/End: Original strand, 24790250 - 24790355
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttag-tggttactactttcctttgctccacacatcttactttgtattggtgt 187  Q
    |||||||||||||| |||| ||||||||||||  |||||| ||||||||| | ||||||| ||||||| |||||||||||||| ||||||| ||||||||    
T  24790250 attagatctaggtggtgtt-ttgttgattattacttgcacgcactttgtttggtggttaccactttccgttgctccacacatcatactttgcattggtgt 24790348  T
Q  188 ggttttg 194  Q
    | |||||    
T  24790349 gtttttg 24790355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 89 - 196
Target Start/End: Original strand, 43864490 - 43864598
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| |||||||||||||||||| |||    ||||||| || || |||| |||||||||| ||||||||||| || ||||||||||||||    
T  43864490 attagatctaggtgctgttattgttgattattgcttgtgttcactttgatattgattaccactttcctttactccacacatcatagtttgtattggtgtg 43864589  T
Q  189 -gttttgag 196  Q
     ||||||||    
T  43864590 agttttgag 43864598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 89 - 196
Target Start/End: Complemental strand, 495909 - 495803
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||||||||||||||| |||||| |||     |||||| || |||||||||||||||||||||||||| ||| || |||||||| |||||    
T  495909 attagatctaggtgttgttattgttg-ttattgtttgtgtttactttgatattggttactactttcctttgctccacatatcataatttgtattagtgtg 495811  T
Q  189 gttttgag 196  Q
     |||||||    
T  495810 attttgag 495803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 89 - 196
Target Start/End: Complemental strand, 41648935 - 41648829
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| || |||||||| |||||| |||    ||||||| || | |||||||||||||||||||||||||||| || ||||||||||||||    
T  41648935 attagatctaggtgctgctattgttg-ttattgcttgtgttcactttgatattagttactactttcctttgctccacacatcatagtttgtattggtgtg 41648837  T
Q  189 gttttgag 196  Q
     |||||||    
T  41648836 attttgag 41648829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 89 - 188
Target Start/End: Complemental strand, 47676058 - 47675960
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||||||||||| ||| || ||| |||    ||||||| || |||||||||||||||||||||||||||||| || ||||||||||||||    
T  47676058 attagatctaggtgttgttattattg-ttgttgcttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtg 47675960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 48491822 - 48491944
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||| |||||||||||||||||||| |||    ||||||| || |||||||||||||||||| |||| |||||  || || |||||||||||    
T  48491822 attagatctaggcgttgttattgttgattattgcttgtgttcactttgatattggttactactttcctttactccgcacattatagttggtattggtgtg 48491921  T
Q  189 gttttgagatcggaatacacaaca 212  Q
     |||||| ||| |||| |||||||    
T  48491922 attttga-atccgaattcacaaca 48491944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 89 - 213
Target Start/End: Original strand, 26417562 - 26417686
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||| ||||||||| |||||||||||||||||| |||     |||||| || |||||||||||||||||| ||||||| ||| || ||||||||||||||    
T  26417562 attatatctaggtgctgttattgttgattattgcttgtggttactttgatattggttactactttcctttactccacatatcatagtttgtattggtgtg 26417661  T
Q  189 -gttttgagatcggaatacacaacat 213  Q
     |||||||| || |||| ||||||||    
T  26417662 agttttgag-tccgaattcacaacat 26417686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 89 - 188
Target Start/End: Original strand, 4586407 - 4586506
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    ||||||||||||||||||||||||| ||||||| |||    |||||||  | ||||||| |||||||||||||||||||||| || |||  |||||||||    
T  4586407 attagatctaggtgttgttattgtttattattgcttgtgttcactttgaaattggttaccactttcctttgctccacacatcatagtttacattggtgtg 4586506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 89 - 188
Target Start/End: Complemental strand, 41317360 - 41317262
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||||||||||| ||| || ||| |||    ||||||| || |||||||||||||||||||||||| ||||| || ||||||||||||||    
T  41317360 attagatctaggtgttgttattattg-ttgttgcttgtgttcactttgatattggttactactttcctttgctccaaacatcatagtttgtattggtgtg 41317262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 104 - 212
Target Start/End: Complemental strand, 43504061 - 43503947
Alignment:
Q  104 tgttattgttgattattgattgcacccac--tttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg----gttttgaga 197  Q
    |||| ||||||||||||| |||||| |||  |||||| |||||||| ||| |||||||||||||||||| || || |||||||||||    | |||||||    
T  43504061 tgtttttgttgattattgcttgcacacacactttgttggtggttaccactctcctttgctccacacatcatatttcgtattggtgtgacacgatttgaga 43503962  T
Q  198 tcggaatacacaaca 212  Q
    ||||||| |||||||    
T  43503961 tcggaattcacaaca 43503947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 92 - 196
Target Start/End: Original strand, 8153587 - 8153690
Alignment:
Q  92 agatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtggtt 191  Q
    ||||||||||||||||||| ||| || ||| |||  | ||||||| || || |||||||||||||||||||||| |||| || |||||||| ||||| ||    
T  8153587 agatctaggtgttgttattattg-ttgttgcttgtgctcactttgatattgattactactttcctttgctccacgcatcatagtttgtattagtgtgatt 8153685  T
Q  192 ttgag 196  Q
    |||||    
T  8153686 ttgag 8153690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 89 - 196
Target Start/End: Original strand, 19502425 - 19502532
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||||||||||| ||| || ||| ||| |   ||||||  | |||||||||||||||||||||||||||||| || |||||||| |||||    
T  19502425 attagatctaggtgttgttattattg-ttgttgcttgtatttactttgaaattggttactactttcctttgctccacacatcatagtttgtattagtgtg 19502523  T
Q  189 -gttttgag 196  Q
     ||||||||    
T  19502524 agttttgag 19502532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 89 - 196
Target Start/End: Complemental strand, 31732891 - 31732783
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    ||||||||||   |||||||||||||||||||| |||    |||||||  | |||||||||||||| ||||||||||||||| || |||||| |||||||    
T  31732891 attagatctaaaggttgttattgttgattattgcttgtgttcactttgaaattggttactactttcatttgctccacacatcatagtttgtactggtgtg 31732792  T
Q  189 -gttttgag 196  Q
     ||||||||    
T  31732791 agttttgag 31732783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 89 - 188
Target Start/End: Complemental strand, 47673866 - 47673768
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||||||||||| ||| || ||| |||    ||||||| || |||||||||||||| |||| |||||||||| || ||||||||||||||    
T  47673866 attagatctaggtgttgttattattg-ttgttgtttgtgttcactttgatattggttactactttcttttgttccacacatcatagtttgtattggtgtg 47673768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 14069702 - 14069648
Alignment:
Q  143 gttactactttcctttgctccacacatcttactttgtattggtgtg-gttttgag 196  Q
    |||||||||||||||||||||||||||| || |||||||||||||| ||||||||    
T  14069702 gttactactttcctttgctccacacatcatagtttgtattggtgtgagttttgag 14069648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 14379730 - 14379676
Alignment:
Q  143 gttactactttcctttgctccacacatcttactttgtattggtgtg-gttttgag 196  Q
    |||||||||||||||||||||||||||| || |||||||||||||| ||||||||    
T  14379730 gttactactttcctttgctccacacatcatagtttgtattggtgtgagttttgag 14379676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 89 - 191
Target Start/End: Original strand, 20344145 - 20344250
Alignment:
Q  89 attagatctaggtgttg--ttattgttgattattgattgcacccactttgttag-tggttactactttcctttgctccacacatcttactttgtattggt 185  Q
    |||||||||||||| ||  || |||| |||| ||| |||||| ||||||||| | ||||||| ||| |||||||||||||||||| | ||||| ||||||    
T  20344145 attagatctaggtgctggttttttgtcgattgttgcttgcacacactttgtttggtggttaccactctcctttgctccacacatcattctttgcattggt 20344244  T
Q  186 gtggtt 191  Q
    ||||||    
T  20344245 gtggtt 20344250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 89 - 213
Target Start/End: Original strand, 1113899 - 1114022
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||||| ||||||||| |||||| |||     |||||| || | ||||| |||||||||||||||||||||| || ||||||||| ||||    
T  1113899 attagatctaggtgttattattgttg-ttattgcttgtgtttactttgatattagttaccactttcctttgctccacacatcatagtttgtattgatgtg 1113997  T
Q  189 -gttttgagatcggaatacacaacat 213  Q
     |||||||  ||||||| ||||||||    
T  1113998 agttttga-ttcggaattcacaacat 1114022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 38671093 - 38671040
Alignment:
Q  143 gttactactttcctttgctccacacatcttactttgtattggtgtggttttgag 196  Q
    ||||||| |||||||||||||||||||| || |||||||||||||| |||||||    
T  38671093 gttactattttcctttgctccacacatcatagtttgtattggtgtgattttgag 38671040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 132 - 196
Target Start/End: Complemental strand, 36146291 - 36146227
Alignment:
Q  132 ctttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtggttttgag 196  Q
    ||||| || |||||||||||||||||||||||||||||| || |||||||| ||||  |||||||    
T  36146291 ctttgatattggttactactttcctttgctccacacatcatagtttgtatttgtgtaattttgag 36146227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 170
Target Start/End: Original strand, 23344263 - 23344292
Alignment:
Q  141 tggttactactttcctttgctccacacatc 170  Q
    ||||||||||||||||||||||||||||||    
T  23344263 tggttactactttcctttgctccacacatc 23344292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 2e-32; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 188
Target Start/End: Complemental strand, 13992213 - 13992114
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| |||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||| || || |||||||||||    
T  13992213 attagatctaggtgctgttattgttgattattgcttgcactcactttgttattggttactactttcctttgctccacacatcatatttcgtattggtgtg 13992114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 48143294 - 48143417
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    ||||||||||||||||||||||||||||||||| |||    ||||||| || |||||||||||||||||||||||||||||| || ||||||||||||||    
T  48143294 attagatctaggtgttgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtg 48143393  T
Q  189 gttttgagatcggaatacacaaca 212  Q
     |||||||  |||||| |||||||    
T  48143394 attttgagtccggaattcacaaca 48143417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 5370004 - 5369881
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| |||||||||||||||||| |||    ||||||| || || ||||||||||||||| ||||||||||| || ||||||||||||||    
T  5370004 attagatctaggtgctgttattgttgattattgcttgtgttcactttgatattgattactactttcctttactccacacatcatagtttgtattggtgtg 5369905  T
Q  189 gttttgagatcggaatacacaaca 212  Q
     |||||||| |||||| |||||||    
T  5369904 attttgagaccggaattcacaaca 5369881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 89 - 196
Target Start/End: Complemental strand, 56178558 - 56178451
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    ||||||||||||||||||||||||| ||||||| |||    ||||||| || |||||||||||||||||||||||||||||| || ||||||||||||||    
T  56178558 attagatctaggtgttgttattgtttattattgcttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtg 56178459  T
Q  189 gttttgag 196  Q
     |||||||    
T  56178458 attttgag 56178451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 89 - 195
Target Start/End: Complemental strand, 34570336 - 34570230
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    ||||||||||||||||||||||||||||||||| |||    || |||| || |||||||||||||||||||||||||||||| || ||| ||||||||||    
T  34570336 attagatctaggtgttgttattgttgattattgtttgtgttcattttgatattggttactactttcctttgctccacacatcatagtttatattggtgtg 34570237  T
Q  189 gttttga 195  Q
     ||||||    
T  34570236 attttga 34570230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 92 - 196
Target Start/End: Complemental strand, 52082582 - 52082478
Alignment:
Q  92 agatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtggtt 191  Q
    ||||||||||| |||||||||||||||||| |||    ||||||| || ||||||||||||||||||| |||||||||| || |||||||||||||| ||    
T  52082582 agatctaggtgctgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgttccacacatcataatttgtattggtgtgatt 52082483  T
Q  192 ttgag 196  Q
    |||||    
T  52082482 ttgag 52082478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 130 - 212
Target Start/End: Complemental strand, 29999710 - 29999628
Alignment:
Q  130 cactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtggttttgagatcggaatacacaaca 212  Q
    ||||||| || |||||||||||||||||||||||||||||| || |||||||||||||| |||||||| |||||| |||||||    
T  29999710 cactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtgattttgagaccggaattcacaaca 29999628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 89 - 215
Target Start/End: Complemental strand, 31495227 - 31495096
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccac--tttgttagtggttactactttcctttgctccacacatcttactttgtattggtg 186  Q
    |||||||||||||| |||| ||||||||||||| |||||| |||  ||||||  |||||||||||||||||||||||||||||| || || ||||||||     
T  31495227 attagatctaggtgctgtt-ttgttgattattgcttgcacacacactttgttgatggttactactttcctttgctccacacatcatatttcgtattggta 31495129  T
Q  187 tg----gttttgagatcggaatacacaacatgt 215  Q
    ||    | |||||||||||||| ||||||||||    
T  31495128 tgacacgatttgagatcggaattcacaacatgt 31495096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 89 - 196
Target Start/End: Original strand, 37740871 - 37740979
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| |||||||||||||||||||||     ||||||| || || ||||||||||||| ||||||||||||| || ||||||||||||||    
T  37740871 attagatctaggtgctgttattgttgattattgattctgttcactttgatattgattactactttcctgtgctccacacatcatagtttgtattggtgtg 37740970  T
Q  189 -gttttgag 196  Q
     ||||||||    
T  37740971 agttttgag 37740979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 89 - 196
Target Start/End: Complemental strand, 47038337 - 47038231
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||||||||||||||| |||||| |||     |||||| || ||||||||||||||||||| |||||||||| || ||||||||||||||    
T  47038337 attagatctaggtgttgttattgttg-ttattgtttgtgtttactttgatattggttactactttcctttgttccacacatcatagtttgtattggtgtg 47038239  T
Q  189 gttttgag 196  Q
     |||||||    
T  47038238 attttgag 47038231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 89 - 196
Target Start/End: Complemental strand, 48893564 - 48893458
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| ||||||||||| |||||| |||     |||||| || |||||||||||||||||||||||||||||| || ||||||||||||||    
T  48893564 attagatctaggtgctgttattgttg-ttattgcttgtgtttactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtg 48893466  T
Q  189 gttttgag 196  Q
     |||||||    
T  48893465 attttgag 48893458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 89 - 196
Target Start/End: Complemental strand, 52095284 - 52095177
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    ||||||||||||||||||||||||||||||||  |||    ||||||| || || |||||||||||||||| ||||||| || || ||||||||||||||    
T  52095284 attagatctaggtgttgttattgttgattattacttgtgttcactttgatattgattactactttcctttgttccacacgtcatagtttgtattggtgtg 52095185  T
Q  189 gttttgag 196  Q
     |||||||    
T  52095184 attttgag 52095177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 89 - 196
Target Start/End: Complemental strand, 54199830 - 54199723
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| |||||||| ||||||||| |||    ||||||| || |||||||||||||||||||||||| ||||| |  ||||||||||||||    
T  54199830 attagatctaggtgatgttattgctgattattgcttgtgttcactttgatactggttactactttcctttgctccatacatcatcgtttgtattggtgtg 54199731  T
Q  189 gttttgag 196  Q
     |||||||    
T  54199730 attttgag 54199723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 89 - 196
Target Start/End: Original strand, 5872064 - 5872168
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||||||||||| ||| || ||| |||    ||||||| || ||||||||||||||||||||||||||||||  | ||||||||||||||    
T  5872064 attagatctaggtgttgttattattg-ttgttgtttgtgttcactttgatattggttactactttcctttgctccacacatc--agtttgtattggtgtg 5872160  T
Q  189 gttttgag 196  Q
     |||||||    
T  5872161 attttgag 5872168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 89 - 186
Target Start/End: Complemental strand, 9927381 - 9927284
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtg 186  Q
    |||| ||||||||| |||||||||||||||||| |||     |||||| || |||| ||||||||||||||||||||||||| || ||| ||||||||    
T  9927381 attaaatctaggtgctgttattgttgattattgcttgtgtttactttgatattggtaactactttcctttgctccacacatcatagtttatattggtg 9927284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 141 - 196
Target Start/End: Complemental strand, 26175507 - 26175451
Alignment:
Q  141 tggttactactttcctttgctccacacatcttactttgtattggtgtg-gttttgag 196  Q
    |||||||||||||||||||||||||||||| || |||||||||||||| ||||||||    
T  26175507 tggttactactttcctttgctccacacatcatagtttgtattggtgtgagttttgag 26175451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 132 - 196
Target Start/End: Complemental strand, 45687066 - 45687002
Alignment:
Q  132 ctttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtggttttgag 196  Q
    ||||| || |||||||||||||||||||||||| ||||| || |||||||||||||| |||||||    
T  45687066 ctttgatattggttactactttcctttgctccatacatcatagtttgtattggtgtgattttgag 45687002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 89 - 196
Target Start/End: Complemental strand, 46147317 - 46147210
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    ||||||||||||| |||||||| ||| || ||| |||    ||||||| || |||||||||||||||||||||||||||||| || |||| |||||||||    
T  46147317 attagatctaggtattgttattattg-ttgttgcttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgcattggtgtg 46147219  T
Q  189 -gttttgag 196  Q
     ||||||||    
T  46147218 agttttgag 46147210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 89 - 196
Target Start/End: Complemental strand, 52467280 - 52467172
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||| ||||||||||| ||||| |||| |||     |||||| || ||||||| ||||||||||||| |||||||| || ||||||||||||||    
T  52467280 attagatctatgtgttgttattattgatgattgcttgtctttactttgatattggttaccactttcctttgcttcacacatcatagtttgtattggtgtg 52467181  T
Q  189 -gttttgag 196  Q
     ||||||||    
T  52467180 agttttgag 52467172  T

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Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 87 - 213
Target Start/End: Complemental strand, 36463319 - 36463195
Alignment:
Q  87 aaattagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtg 186  Q
    |||||||||||||||||||||||| ||| || ||| |||     |||||| || |||||| ||||||||||| ||||||||||| || |||||||| |||    
T  36463319 aaattagatctaggtgttgttattattg-ttgttgcttgtgtttactttgatattggttattactttcctttactccacacatcatagtttgtattagtg 36463221  T
Q  187 tggttttgagatcggaatacacaacat 213  Q
    || ||||||| || |||| ||||||||    
T  36463220 tgattttgag-tccgaattcacaacat 36463195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 141 - 196
Target Start/End: Complemental strand, 12743799 - 12743743
Alignment:
Q  141 tggttactactttcctttgctccacacatcttactttgtattggtgtg-gttttgag 196  Q
    |||||||||||||||||||||||||||| | || |||||||||||||| ||||||||    
T  12743799 tggttactactttcctttgctccacacaacatagtttgtattggtgtgagttttgag 12743743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 141 - 196
Target Start/End: Complemental strand, 12739424 - 12739368
Alignment:
Q  141 tggttactactttcctttgctccacacatcttactttgtattggtgtg-gttttgag 196  Q
    |||||||||||||| ||| ||||||||||| || |||||||||||||| ||||||||    
T  12739424 tggttactactttcttttactccacacatcatagtttgtattggtgtgagttttgag 12739368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 212
Target Start/End: Original strand, 29254791 - 29254861
Alignment:
Q  141 tggttactactttcctttgctccacacatcttactttgtattggtgtggttttgagatcggaatacacaaca 212  Q
    |||||||||||||| ||||||||||||||| || |||||||| ||||| |||| || || |||| |||||||    
T  29254791 tggttactactttc-tttgctccacacatcatagtttgtattagtgtgattttaagttccgaattcacaaca 29254861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 132 - 170
Target Start/End: Original strand, 4588240 - 4588278
Alignment:
Q  132 ctttgttagtggttactactttcctttgctccacacatc 170  Q
    ||||| |||||||||||| ||||||||||||||||||||    
T  4588240 ctttgatagtggttactattttcctttgctccacacatc 4588278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 5207717 - 5207666
Alignment:
Q  144 ttactactttcctttgctccacacatcttactttgtattggtgtggttttgag 196  Q
    ||||||||||||||||||||||||| | || ||| |||||||||| |||||||    
T  5207717 ttactactttcctttgctccacacaccata-tttatattggtgtgattttgag 5207666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 89 - 121
Target Start/End: Original strand, 5429925 - 5429957
Alignment:
Q  89 attagatctaggtgttgttattgttgattattg 121  Q
    |||||||||||||| ||||||||||||||||||    
T  5429925 attagatctaggtgctgttattgttgattattg 5429957  T

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Target: scaffold0002 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 434780 - 434903
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| |||||||||||||||||||||| |  ||||||  || |||||||||||||||||||||||||||||| || || |||||||||||    
T  434780 attagatctaggtgctgttattgttgattattgattgaaaacactttaataatggttactactttcctttgctccacacatcatagttcgtattggtgtg 434879  T
Q  189 gttttgagatcggaatacacaaca 212  Q
      ||||||| |||||| |||||||    
T  434880 actttgagaacggaattcacaaca 434903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 1162 - 1285
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    |||||||||||||| |||||||||||||||||| |||||  ||| |||| | ||||||||||| ||||||| |||||||||| || || |||||||||||    
T  1162 attagatctaggtggtgttattgttgattattgcttgcattcacattgtcattggttactactatcctttgttccacacatcatagttcgtattggtgtg 1261  T
Q  189 gttttgagatcggaatacacaaca 212  Q
      ||||||| |||||| |||||||    
T  1262 actttgagaccggaattcacaaca 1285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 89 - 194
Target Start/End: Original strand, 114849 - 114955
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatctta-ctttgtattggtgt 187  Q
    ||||||| |||||||||||||||||||||||||||||    ||||||| || |||||| ||||||||||||||||||||||| ||  |||||||||||||    
T  114849 attagatataggtgttgttattgttgattattgattgtgttcactttgatattggttattactttcctttgctccacacatcatagttttgtattggtgt 114948  T
Q  188 ggttttg 194  Q
    | |||||    
T  114949 gattttg 114955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 20337 - 20241
Alignment:
Q  89 attagatctaggtgttgttattgttgattattgattgcacccactttgttagtggttactactttcctttgctccacacatcttactttgtattggt 185  Q
    |||||||||||||| |||||||||| ||||||| |||    |||||||  | |||||||||| ||||||||||||||||||| || |||||||||||    
T  20337 attagatctaggtgctgttattgttaattattgcttgtgttcactttgacattggttactaccttcctttgctccacacatcatagtttgtattggt 20241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 141 - 196
Target Start/End: Complemental strand, 148982 - 148927
Alignment:
Q  141 tggttactactttcctttgctccacacatcttactttgtattggtgtggttttgag 196  Q
    |||||||||||||||||||||||||||||  || ||||||||| |||| |||||||    
T  148982 tggttactactttcctttgctccacacattatagtttgtattgatgtgattttgag 148927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1668 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold1668
Description:

Target: scaffold1668; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 1369 - 1325
Alignment:
Q  144 ttactactttcctttgctccacacatcttactttgtattggtgtg 188  Q
    ||||||||||||||||||||||||||| ||  |||||||||||||    
T  1369 ttactactttcctttgctccacacatcatagattgtattggtgtg 1325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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