View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14713_low_32 (Length: 393)
Name: NF14713_low_32
Description: NF14713
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14713_low_32 |
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Alignment Details
Target: chr8 (Bit Score: 363; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 363; E-Value: 0
Query Start/End: Original strand, 15 - 381
Target Start/End: Complemental strand, 7212694 - 7212328
Alignment:
| Q |
15 |
actgaacacataaggaatcaacatttctgacataacttttccttcaaaagaaaaacatgttactaccatataccaaacataaataatcattcaacaataa |
114 |
Q |
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| T |
7212694 |
actgaacacataaggaatcaacatttctgacataacttttccttcaaaagaaaaacatgttactaccatataccaaacataaataatcattcaacaataa |
7212595 |
T |
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| Q |
115 |
taattctgacatttgatttaattcctaagctaatgttttttaatgtccaaacattcccttcattcattccacaaagcaaacataggaacttgattaacca |
214 |
Q |
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| T |
7212594 |
taattctgacatttgatttaattcctaagctaatgttttttaatgtcaaaacattcccttcattcattccacaaagcaaacataggaacttgattaacca |
7212495 |
T |
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| Q |
215 |
aacccaaatttccaagcctattgttgttcatgtggtcattttcattgcttccatcatcaaattttggtccatgcagtgtgaagtaaccatgtccataatc |
314 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7212494 |
aacccaaatttccaagcctattgttgttcatgtggtcattttcattgcttccatcatcaaattttggtccatgcagtgtgaagtaaccatgtccataatc |
7212395 |
T |
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| Q |
315 |
tgctccactcactccaaactcattaggtagtcccaatgaacatttgggactttgagggttcatctca |
381 |
Q |
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| T |
7212394 |
tgctccactcactccaaactcattaggtagtcccaatgaacatttgggactttgagggttcatctca |
7212328 |
T |
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