View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14713_low_37 (Length: 365)
Name: NF14713_low_37
Description: NF14713
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14713_low_37 |
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Alignment Details
Target: chr6 (Bit Score: 330; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 330; E-Value: 0
Query Start/End: Original strand, 10 - 351
Target Start/End: Complemental strand, 4402959 - 4402618
Alignment:
| Q |
10 |
gcataggacatgatagtgtacaattattttacactgccaatggctgccattggatgatagaatacatggtttctgttggatgacagtgtaaaataattca |
109 |
Q |
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| T |
4402959 |
gcataggacatgatagtgtacaattattttacactgccaatggctgctattggatgatagaatacatggtttctgttggatgacagtgtaaaataattca |
4402860 |
T |
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| Q |
110 |
cttgtgctttcataatgtaattctttattaagaaaccattgacattagatactttgaaagaagagtgatataaacacactctttagataggagactctcc |
209 |
Q |
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| T |
4402859 |
cctgtgctttcataatgtaattctttattaagaaaccattgacattagatactttgaaagaagagtgatataaacacactctttagataggagactctcc |
4402760 |
T |
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| Q |
210 |
tcaacacactttctaattggttatttcaaatgtaggtcccacttaaattaagcgagactggtttgaattttgaccaattagagagaaatatttgattctt |
309 |
Q |
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| T |
4402759 |
tcaacacactttctaattgcttatttcaaatgtaggtcccacttaaattaagcgagactggtttgaattttgaccaattagagagaaatatttgattctt |
4402660 |
T |
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| Q |
310 |
aactaattagagagtttattgagaaaagtgtggtagagagtg |
351 |
Q |
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| T |
4402659 |
aactaattagagagtttattgagaaaagtgtggtagagagtg |
4402618 |
T |
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