View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14713_low_45 (Length: 323)
Name: NF14713_low_45
Description: NF14713
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14713_low_45 |
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Alignment Details
Target: chr8 (Bit Score: 302; Significance: 1e-170; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 6 - 307
Target Start/End: Original strand, 3241251 - 3241552
Alignment:
| Q |
6 |
catcatcaaatgaatcattgtcaccatatcaaaagtatttgaccacttgtatagagaaattaacccaaccatgtgatgatgagattttttatactgtata |
105 |
Q |
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| T |
3241251 |
catcatcaaatgaatcattgtcaccatatcaaaagtatttgaccacttgtatagagaaattaacccaaccatgtgatgatgagattttttatactgtata |
3241350 |
T |
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| Q |
106 |
tattggtaatcaaacggttagttatgaatgttgttctcagcttgtcaatgacatgggacaacgttgccatgatgagattacaagatttattgtggaaagt |
205 |
Q |
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| T |
3241351 |
tattggtaatcaaacggttagttatgaatgttgttctcagcttgtcaatgacatgggacaacgttgccatgatgagattacaagatttattgtggaaagt |
3241450 |
T |
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| Q |
206 |
ccaaagttcaaagcaaacaaaatttcaatattgcaaaggagtaagaaagtatggaatgaatgttcaaatgcttttgatgttgattccccattaggatcaa |
305 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3241451 |
ccaaagttcaaagcaaacaaaatttcaatattgcaaaggagtaagaaagtatggaatgaatgttcaaatgcttttgatgttgattccccattaggatcaa |
3241550 |
T |
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| Q |
306 |
tt |
307 |
Q |
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|| |
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| T |
3241551 |
tt |
3241552 |
T |
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