View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14713_low_47 (Length: 311)

Name: NF14713_low_47
Description: NF14713
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14713_low_47
NF14713_low_47
[»] chr4 (13 HSPs)
chr4 (18-268)||(40004822-40005068)
chr4 (268-311)||(24347958-24348001)
chr4 (268-311)||(56030188-56030231)
chr4 (269-311)||(5100743-5100785)
chr4 (269-311)||(14787979-14788021)
chr4 (269-311)||(22135177-22135219)
chr4 (271-306)||(19322410-19322445)
chr4 (268-311)||(38890659-38890702)
chr4 (268-311)||(44600386-44600429)
chr4 (268-311)||(47211266-47211309)
chr4 (269-311)||(14789529-14789571)
chr4 (269-311)||(22132945-22132987)
chr4 (268-311)||(17662784-17662827)
[»] chr1 (19 HSPs)
chr1 (266-311)||(24325344-24325389)
chr1 (267-311)||(17325185-17325229)
chr1 (268-311)||(28998802-28998845)
chr1 (268-311)||(29004518-29004561)
chr1 (269-311)||(4131840-4131882)
chr1 (269-311)||(9459971-9460013)
chr1 (269-311)||(9463798-9463840)
chr1 (269-311)||(39931762-39931804)
chr1 (269-311)||(46432594-46432636)
chr1 (269-311)||(47905956-47905998)
chr1 (269-311)||(48664852-48664894)
chr1 (269-311)||(31736073-31736115)
chr1 (269-306)||(6997214-6997251)
chr1 (269-306)||(6997390-6997427)
chr1 (268-311)||(15295397-15295440)
chr1 (269-300)||(21964366-21964397)
chr1 (269-311)||(27337490-27337532)
chr1 (269-311)||(27339688-27339730)
chr1 (269-311)||(45693982-45694024)
[»] chr8 (8 HSPs)
chr8 (268-311)||(3873749-3873792)
chr8 (269-311)||(3265710-3265752)
chr8 (269-311)||(32339094-32339136)
chr8 (269-311)||(41384493-41384535)
chr8 (269-311)||(43529871-43529913)
chr8 (269-306)||(28283776-28283813)
chr8 (270-311)||(41382420-41382461)
chr8 (268-311)||(15808961-15809004)
[»] chr7 (28 HSPs)
chr7 (268-311)||(37412674-37412717)
chr7 (269-311)||(443326-443368)
chr7 (269-311)||(3035415-3035457)
chr7 (269-311)||(7092726-7092768)
chr7 (269-311)||(7094973-7095015)
chr7 (269-311)||(7472532-7472574)
chr7 (269-311)||(11756925-11756967)
chr7 (269-311)||(18345237-18345279)
chr7 (269-311)||(20299155-20299197)
chr7 (269-311)||(28487249-28487291)
chr7 (266-311)||(3676994-3677039)
chr7 (269-306)||(7470584-7470621)
chr7 (268-311)||(7352204-7352247)
chr7 (268-311)||(20625733-20625776)
chr7 (268-311)||(20629624-20629667)
chr7 (268-311)||(20642043-20642086)
chr7 (268-311)||(21989852-21989895)
chr7 (269-311)||(7349825-7349867)
chr7 (269-311)||(31156458-31156500)
chr7 (269-311)||(38395986-38396028)
chr7 (269-311)||(47865328-47865370)
chr7 (269-311)||(1606171-1606213)
chr7 (269-311)||(1849665-1849707)
chr7 (269-311)||(21470841-21470883)
chr7 (269-311)||(28485261-28485303)
chr7 (269-311)||(38393683-38393725)
chr7 (279-311)||(20297108-20297140)
chr7 (272-304)||(40281957-40281989)
[»] chr6 (9 HSPs)
chr6 (268-311)||(30035154-30035197)
chr6 (269-311)||(5275886-5275928)
chr6 (268-311)||(26933116-26933159)
chr6 (269-311)||(12196062-12196104)
chr6 (269-311)||(22858494-22858536)
chr6 (269-311)||(30966923-30966965)
chr6 (268-311)||(19705123-19705166)
chr6 (269-311)||(2629437-2629479)
chr6 (271-311)||(20526548-20526588)
[»] chr3 (16 HSPs)
chr3 (268-311)||(1313081-1313124)
chr3 (269-311)||(746422-746464)
chr3 (269-311)||(10622085-10622127)
chr3 (269-311)||(25533107-25533149)
chr3 (269-311)||(41848804-41848846)
chr3 (269-311)||(42991953-42991995)
chr3 (271-311)||(42989954-42989994)
chr3 (268-311)||(455572-455615)
chr3 (268-311)||(53918208-53918251)
chr3 (269-311)||(457950-457992)
chr3 (268-306)||(27000082-27000120)
chr3 (269-311)||(51943042-51943084)
chr3 (269-311)||(53916040-53916082)
chr3 (268-311)||(4104441-4104484)
chr3 (269-311)||(6561613-6561655)
chr3 (269-311)||(27636170-27636212)
[»] scaffold1674 (1 HSPs)
scaffold1674 (269-311)||(53-95)
[»] scaffold0005 (2 HSPs)
scaffold0005 (269-311)||(51709-51751)
scaffold0005 (269-311)||(50159-50201)
[»] chr5 (14 HSPs)
chr5 (269-311)||(15551925-15551967)
chr5 (269-311)||(18466411-18466453)
chr5 (269-311)||(25803707-25803749)
chr5 (269-311)||(26097421-26097463)
chr5 (269-311)||(27912219-27912261)
chr5 (269-306)||(18468698-18468735)
chr5 (269-306)||(26098804-26098841)
chr5 (269-306)||(27910135-27910172)
chr5 (268-311)||(15143219-15143262)
chr5 (272-311)||(18509865-18509904)
chr5 (268-311)||(18596325-18596368)
chr5 (268-311)||(21288528-21288571)
chr5 (269-311)||(3373588-3373630)
chr5 (271-311)||(18511760-18511800)
[»] chr2 (7 HSPs)
chr2 (269-311)||(23452787-23452829)
chr2 (269-311)||(42924052-42924094)
chr2 (268-311)||(35218523-35218566)
chr2 (268-306)||(27136468-27136506)
chr2 (269-311)||(35216142-35216184)
chr2 (268-311)||(42452448-42452491)
chr2 (269-311)||(27583865-27583907)
[»] scaffold0468 (1 HSPs)
scaffold0468 (270-311)||(2143-2184)
[»] scaffold0154 (1 HSPs)
scaffold0154 (268-311)||(12019-12062)
[»] scaffold0031 (1 HSPs)
scaffold0031 (269-311)||(78883-78925)


Alignment Details
Target: chr4 (Bit Score: 140; Significance: 2e-73; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 18 - 268
Target Start/End: Complemental strand, 40005068 - 40004822
Alignment:
Q  18 gtcacataggaaaagaaatgtaaatattgtaaacatggattttttaaaacatcaaggtttctaattctagcaacttatcctaattaaggatccgtatttc 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      ||||||||||||||    |||||||||||||    
T  40005068 gtcacataggaaaagaaatgtaaatattgtaaacatggattttttaaaacatcaaggtttcta------gcaacttatcctaa----ggatccgtatttc 40004979  T
Q  118 tagtttggatcnnnnnnnnnnnnnntaaattttgaatgtaaccgtttgaactattgtcttctggcttctttgttggataaattgatagtagattgtggat 217  Q
    |||||||||||              ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40004978 tagtttggatcaaaaaataaaaaaataaattttgaatgtaacccgttgaactattgtcttctggcttctttgttggataaattgatagtagattgtggat 40004879  T
Q  218 tgttacatgtgtggga------aaatcaaagggggaactgcctgagagattgagagt 268  Q
     |||||||||||||||      |||||||||||||||||||||||||||||||||||    
T  40004878 cgttacatgtgtgggaactgggaaatcaaagggggaactgcctgagagattgagagt 40004822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 268 - 311
Target Start/End: Original strand, 24347958 - 24348001
Alignment:
Q  268 ttgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  24347958 ttgttgtagtatgactcaaaatttgatggatggagaatattgtt 24348001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 268 - 311
Target Start/End: Original strand, 56030188 - 56030231
Alignment:
Q  268 ttgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  56030188 ttgttgtagtatgactcaaaatttgatggatggagaatattgtt 56030231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 311
Target Start/End: Original strand, 5100743 - 5100785
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  5100743 tgttgtagtatgactcaaaatttgatggatggagaatattgtt 5100785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 311
Target Start/End: Complemental strand, 14788021 - 14787979
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  14788021 tgttgtagtatgactcaaaatttgatggatggagaataatgtt 14787979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 311
Target Start/End: Complemental strand, 22135219 - 22135177
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  22135219 tgttgtagtatgactcaaaatttgatggatggagaatattgtt 22135177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 271 - 306
Target Start/End: Original strand, 19322410 - 19322445
Alignment:
Q  271 ttgtagtatgactcaaaatttgatggatggagaata 306  Q
    ||||||||||||||||||||||||||||||||||||    
T  19322410 ttgtagtatgactcaaaatttgatggatggagaata 19322445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 268 - 311
Target Start/End: Complemental strand, 38890702 - 38890659
Alignment:
Q  268 ttgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||    
T  38890702 ttgttgtagcatgactcaaaatttgatggatggagaatattgtt 38890659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 268 - 311
Target Start/End: Complemental strand, 44600429 - 44600386
Alignment:
Q  268 ttgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||    
T  44600429 ttgttgtagtatgactcaaaaattgatggatggagaatattgtt 44600386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 268 - 311
Target Start/End: Complemental strand, 47211309 - 47211266
Alignment:
Q  268 ttgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||| |||||||||||||||||||||| ||||    
T  47211309 ttgttgtagtatgacttaaaatttgatggatggagaatattgtt 47211266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 311
Target Start/End: Complemental strand, 14789571 - 14789529
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    ||||||||||||||||||||||||||||||| |||||| ||||    
T  14789571 tgttgtagtatgactcaaaatttgatggatgaagaataatgtt 14789529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 311
Target Start/End: Complemental strand, 22132987 - 22132945
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    ||||||||||||| |||||||||||||||||||||||| ||||    
T  22132987 tgttgtagtatgattcaaaatttgatggatggagaatattgtt 22132945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 268 - 311
Target Start/End: Complemental strand, 17662827 - 17662784
Alignment:
Q  268 ttgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    ||||||||||||||||  ||||||||||||||||||||| ||||    
T  17662827 ttgttgtagtatgactacaaatttgatggatggagaatattgtt 17662784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 266 - 311
Target Start/End: Original strand, 24325344 - 24325389
Alignment:
Q  266 agttgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  24325344 agttgttgtagtatgactcaaaatttgatggatggagaatattgtt 24325389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 267 - 311
Target Start/End: Complemental strand, 17325229 - 17325185
Alignment:
Q  267 gttgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  17325229 gttgttgtagtatgactcaaaatttgatggatggagaatattgtt 17325185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 268 - 311
Target Start/End: Complemental strand, 28998845 - 28998802
Alignment:
Q  268 ttgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  28998845 ttgttgtagtatgactcaaaatttgatggatggagaatattgtt 28998802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 268 - 311
Target Start/End: Complemental strand, 29004561 - 29004518
Alignment:
Q  268 ttgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  29004561 ttgttgtagtatgactcaaaatttgatggatggagaatattgtt 29004518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 311
Target Start/End: Complemental strand, 4131882 - 4131840
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  4131882 tgttgtagtatgactcaaaatttgatggatggagaatattgtt 4131840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 311
Target Start/End: Complemental strand, 9460013 - 9459971
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  9460013 tgttgtagtatgactcaaaatttgatggatggagaatattgtt 9459971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 311
Target Start/End: Complemental strand, 9463840 - 9463798
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  9463840 tgttgtagtatgactcaaaatttgatggatggagaatattgtt 9463798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 311
Target Start/End: Original strand, 39931762 - 39931804
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  39931762 tgttgtagtatgactcaaaatttgatggatggagaatattgtt 39931804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 311
Target Start/End: Complemental strand, 46432636 - 46432594
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  46432636 tgttgtagtatgactcaaaatttgatggatggagaatattgtt 46432594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 311
Target Start/End: Original strand, 47905956 - 47905998
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  47905956 tgttgtagtatgactcaaaatttgatggatggagaatattgtt 47905998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 311
Target Start/End: Original strand, 48664852 - 48664894
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  48664852 tgttgtagtatgactcaaaatttgatggatggagaatattgtt 48664894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 311
Target Start/End: Complemental strand, 31736115 - 31736073
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    ||||||||||||||||||||||||||||| |||||||| ||||    
T  31736115 tgttgtagtatgactcaaaatttgatggaaggagaatattgtt 31736073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 269 - 306
Target Start/End: Original strand, 6997214 - 6997251
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaata 306  Q
    |||| |||||||||||||||||||||||||||||||||    
T  6997214 tgttatagtatgactcaaaatttgatggatggagaata 6997251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 269 - 306
Target Start/End: Complemental strand, 6997427 - 6997390
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaata 306  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  6997427 tgttgtagtatgactcaaaatatgatggatggagaata 6997390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 268 - 311
Target Start/End: Complemental strand, 15295440 - 15295397
Alignment:
Q  268 ttgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||||||||||||||||| | |||||| ||||    
T  15295440 ttgttgtagtatgactcaaaatttgatggaagaagaatattgtt 15295397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 269 - 300
Target Start/End: Complemental strand, 21964397 - 21964366
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatgg 300  Q
    ||||||||||||||||||||||||||||||||    
T  21964397 tgttgtagtatgactcaaaatttgatggatgg 21964366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 311
Target Start/End: Complemental strand, 27337532 - 27337490
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||| ||||||||||||||| ||||| ||||    
T  27337532 tgttgtagtatgactccaaatttgatggatggggaatattgtt 27337490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 311
Target Start/End: Complemental strand, 27339730 - 27339688
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||| |||||||| |||||||||||| ||||    
T  27339730 tgttgtagtatgactccaaatttgacggatggagaatattgtt 27339688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 311
Target Start/End: Complemental strand, 45694024 - 45693982
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    ||||||| ||||| |||||||||||||||||||||||| ||||    
T  45694024 tgttgtactatgattcaaaatttgatggatggagaatattgtt 45693982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 268 - 311
Target Start/End: Original strand, 3873749 - 3873792
Alignment:
Q  268 ttgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  3873749 ttgttgtagtatgactcaaaatttgatggatggagaatattgtt 3873792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 311
Target Start/End: Complemental strand, 3265752 - 3265710
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  3265752 tgttgtagtatgactcaaaatttgatggatggagaatattgtt 3265710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 311
Target Start/End: Original strand, 32339094 - 32339136
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  32339094 tgttgtagtatgactcaaaatttgatggatggagaatattgtt 32339136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 311
Target Start/End: Original strand, 41384493 - 41384535
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  41384493 tgttgtagtatgactcaaaatttgatggatggagaatattgtt 41384535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 311
Target Start/End: Original strand, 43529871 - 43529913
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  43529871 tgttgtagtatgactcaaaatttgatggatggagaatattgtt 43529913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 306
Target Start/End: Complemental strand, 28283813 - 28283776
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaata 306  Q
    ||||||||||||||||||||||||||||||||||||||    
T  28283813 tgttgtagtatgactcaaaatttgatggatggagaata 28283776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 270 - 311
Target Start/End: Original strand, 41382420 - 41382461
Alignment:
Q  270 gttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  41382420 gttgtagtatgactcaaaatttgatggatggagaatattgtt 41382461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 268 - 311
Target Start/End: Original strand, 15808961 - 15809004
Alignment:
Q  268 ttgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  15808961 ttgttttagtatgactcaaaatttgatggatggagaatattgtt 15809004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 268 - 311
Target Start/End: Complemental strand, 37412717 - 37412674
Alignment:
Q  268 ttgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  37412717 ttgttgtagtatgactcaaaatttgatggatggagaatattgtt 37412674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 311
Target Start/End: Original strand, 443326 - 443368
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  443326 tgttgtagtatgactcaaaatttgatggatggagaatattgtt 443368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 311
Target Start/End: Original strand, 3035415 - 3035457
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  3035415 tgttgtagtatgactcaaaatttgatggatggagaatattgtt 3035457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 311
Target Start/End: Complemental strand, 7092768 - 7092726
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  7092768 tgttgtagtatgactcaaaatttgatggatggagaatattgtt 7092726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 311
Target Start/End: Complemental strand, 7095015 - 7094973
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  7095015 tgttgtagtatgactcaaaatttgatggatggagaatattgtt 7094973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 311
Target Start/End: Complemental strand, 7472574 - 7472532
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  7472574 tgttgtagtatgactcaaaatttgatggatggagaatattgtt 7472532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 311
Target Start/End: Original strand, 11756925 - 11756967
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  11756925 tgttgtagtatgactcaaaatttgatggatggagaatattgtt 11756967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 311
Target Start/End: Original strand, 18345237 - 18345279
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  18345237 tgttgtagtatgactcaaaatttgatggatggagaatattgtt 18345279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 311
Target Start/End: Original strand, 20299155 - 20299197
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  20299155 tgttgtagtatgactcaaaatttgatggatggagaatattgtt 20299197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 311
Target Start/End: Original strand, 28487249 - 28487291
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  28487249 tgttgtagtatgactcaaaatttgatggatggagaatattgtt 28487291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 266 - 311
Target Start/End: Original strand, 3676994 - 3677039
Alignment:
Q  266 agttgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||    
T  3676994 agttgttgtagtatgactcaaaatttgatagatggagaatattgtt 3677039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 306
Target Start/End: Complemental strand, 7470621 - 7470584
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaata 306  Q
    ||||||||||||||||||||||||||||||||||||||    
T  7470621 tgttgtagtatgactcaaaatttgatggatggagaata 7470584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 268 - 311
Target Start/End: Complemental strand, 7352247 - 7352204
Alignment:
Q  268 ttgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||    
T  7352247 ttgttgtagtatgactcaaaaattgatggatggagaatattgtt 7352204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 268 - 311
Target Start/End: Original strand, 20625733 - 20625776
Alignment:
Q  268 ttgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  20625733 ttgttctagtatgactcaaaatttgatggatggagaatattgtt 20625776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 268 - 311
Target Start/End: Original strand, 20629624 - 20629667
Alignment:
Q  268 ttgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  20629624 ttgttctagtatgactcaaaatttgatggatggagaatattgtt 20629667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 268 - 311
Target Start/End: Original strand, 20642043 - 20642086
Alignment:
Q  268 ttgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  20642043 ttgttctagtatgactcaaaatttgatggatggagaatattgtt 20642086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 268 - 311
Target Start/End: Original strand, 21989852 - 21989895
Alignment:
Q  268 ttgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||    
T  21989852 ttgttgtagtatgacccaaaatttgatggatggagaatattgtt 21989895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 311
Target Start/End: Complemental strand, 7349867 - 7349825
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||||||| ||||||||||||||||| ||||    
T  7349867 tgttgtagtatgactcaaaaattgatggatggagaatattgtt 7349825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 311
Target Start/End: Complemental strand, 31156500 - 31156458
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||||||| ||||||||||||||||| ||||    
T  31156500 tgttgtagtatgactcaaaaattgatggatggagaatattgtt 31156458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 311
Target Start/End: Original strand, 38395986 - 38396028
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||| ||||||||||||||||||||| ||||    
T  38395986 tgttgtagtatgactccaaatttgatggatggagaatattgtt 38396028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 311
Target Start/End: Original strand, 47865328 - 47865370
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||| ||||||||||||||||||||| ||||    
T  47865328 tgttgtagtatgactccaaatttgatggatggagaatattgtt 47865370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 311
Target Start/End: Original strand, 1606171 - 1606213
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    ||||||||||||||||||||||||||||| | |||||| ||||    
T  1606171 tgttgtagtatgactcaaaatttgatggaagaagaatattgtt 1606213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 311
Target Start/End: Original strand, 1849665 - 1849707
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    ||||||||||||||||||||||||||||| | |||||| ||||    
T  1849665 tgttgtagtatgactcaaaatttgatggaagaagaatattgtt 1849707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 311
Target Start/End: Complemental strand, 21470883 - 21470841
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    ||||||||| |||||| ||||||||||||||||||||| ||||    
T  21470883 tgttgtagtttgactccaaatttgatggatggagaatattgtt 21470841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 311
Target Start/End: Original strand, 28485261 - 28485303
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    ||||||||||||| ||||||||||||||||| |||||| ||||    
T  28485261 tgttgtagtatgattcaaaatttgatggatgaagaatattgtt 28485303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 311
Target Start/End: Original strand, 38393683 - 38393725
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    ||||||||||||| || ||||||||||||||||||||| ||||    
T  38393683 tgttgtagtatgattctaaatttgatggatggagaatattgtt 38393725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 279 - 311
Target Start/End: Original strand, 20297108 - 20297140
Alignment:
Q  279 tgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||||||||||||||| ||||    
T  20297108 tgactcaaaatttgatggatggagaatattgtt 20297140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 272 - 304
Target Start/End: Complemental strand, 40281989 - 40281957
Alignment:
Q  272 tgtagtatgactcaaaatttgatggatggagaa 304  Q
    |||||||||||||||||||||||||||| ||||    
T  40281989 tgtagtatgactcaaaatttgatggatgaagaa 40281957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 268 - 311
Target Start/End: Complemental strand, 30035197 - 30035154
Alignment:
Q  268 ttgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  30035197 ttgttgtagtatgactcaaaatttgatggatggagaatattgtt 30035154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 311
Target Start/End: Complemental strand, 5275928 - 5275886
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  5275928 tgttgtagtatgactcaaaatttgatggatggagaatattgtt 5275886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 268 - 311
Target Start/End: Complemental strand, 26933159 - 26933116
Alignment:
Q  268 ttgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||    
T  26933159 ttgttgtagtatgactcaaaaattgatggatggagaatattgtt 26933116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 311
Target Start/End: Complemental strand, 12196104 - 12196062
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||||||| ||||||||||||||||| ||||    
T  12196104 tgttgtagtatgactcaaaaattgatggatggagaatattgtt 12196062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 311
Target Start/End: Complemental strand, 22858536 - 22858494
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    ||||||||||||||||||||||||||||||| |||||| ||||    
T  22858536 tgttgtagtatgactcaaaatttgatggatgaagaatattgtt 22858494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 311
Target Start/End: Original strand, 30966923 - 30966965
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||| ||||||||||||||||||||| ||||    
T  30966923 tgttgtagtatgactccaaatttgatggatggagaatattgtt 30966965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 268 - 311
Target Start/End: Complemental strand, 19705166 - 19705123
Alignment:
Q  268 ttgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||||||||||||||||| | |||||| ||||    
T  19705166 ttgttgtagtatgactcaaaatttgatggaagaagaatattgtt 19705123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 311
Target Start/End: Complemental strand, 2629479 - 2629437
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    ||||||||||||||||||||||||||||| | |||||| ||||    
T  2629479 tgttgtagtatgactcaaaatttgatggaagaagaatattgtt 2629437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 311
Target Start/End: Original strand, 20526548 - 20526588
Alignment:
Q  271 ttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||||||||||||| || |||||| ||||    
T  20526548 ttgtagtatgactcaaaatttgatgggtgaagaatattgtt 20526588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 268 - 311
Target Start/End: Original strand, 1313081 - 1313124
Alignment:
Q  268 ttgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  1313081 ttgttgtagtatgactcaaaatttgatggatggagaatattgtt 1313124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 311
Target Start/End: Original strand, 746422 - 746464
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  746422 tgttgtagtatgactcaaaatttgatggatggagaatattgtt 746464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 311
Target Start/End: Complemental strand, 10622127 - 10622085
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  10622127 tgttgtagtatgactcaaaatttgatggatggagaatattgtt 10622085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 311
Target Start/End: Original strand, 25533107 - 25533149
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  25533107 tgttgtagtatgactcaaaatttgatggatggagaatattgtt 25533149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 311
Target Start/End: Original strand, 41848804 - 41848846
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  41848804 tgttgtagtatgactcaaaatttgatggatggagaatattgtt 41848846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 311
Target Start/End: Original strand, 42991953 - 42991995
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  42991953 tgttgtagtatgactcaaaatttgatggatggagaatattgtt 42991995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 271 - 311
Target Start/End: Original strand, 42989954 - 42989994
Alignment:
Q  271 ttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  42989954 ttgtagtatgactcaaaatttgatggatggagaatattgtt 42989994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 268 - 311
Target Start/End: Original strand, 455572 - 455615
Alignment:
Q  268 ttgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||    
T  455572 ttgttgtagtatgactcaaaatttgatggatggggaatattgtt 455615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 268 - 311
Target Start/End: Complemental strand, 53918251 - 53918208
Alignment:
Q  268 ttgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  53918251 ttgttatagtatgactcaaaatttgatggatggagaatattgtt 53918208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 311
Target Start/End: Original strand, 457950 - 457992
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||||||||||||||||||| ||||| ||||    
T  457950 tgttgtagtatgactcaaaatttgatggatggggaatattgtt 457992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 268 - 306
Target Start/End: Original strand, 27000082 - 27000120
Alignment:
Q  268 ttgttgtagtatgactcaaaatttgatggatggagaata 306  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  27000082 ttgttgtagtatgactgaaaatttgatggatggagaata 27000120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 311
Target Start/End: Original strand, 51943042 - 51943084
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    ||||||||||||||||||||||||||||||| |||||| ||||    
T  51943042 tgttgtagtatgactcaaaatttgatggatgaagaatattgtt 51943084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 311
Target Start/End: Complemental strand, 53916082 - 53916040
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    ||||||||||||||||||||||||| |||||||||||| ||||    
T  53916082 tgttgtagtatgactcaaaatttgagggatggagaatattgtt 53916040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 268 - 311
Target Start/End: Complemental strand, 4104484 - 4104441
Alignment:
Q  268 ttgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||||||||||||||||| | |||||| ||||    
T  4104484 ttgttgtagtatgactcaaaatttgatggaagaagaatattgtt 4104441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 311
Target Start/End: Original strand, 6561613 - 6561655
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||| |||||||||||||| |||||| ||||    
T  6561613 tgttgtagtatgactcgaaatttgatggatgaagaatattgtt 6561655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 311
Target Start/End: Complemental strand, 27636212 - 27636170
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    ||||||||||||| | |||||||||||||||||||||| ||||    
T  27636212 tgttgtagtatgatttaaaatttgatggatggagaatattgtt 27636170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1674 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold1674
Description:

Target: scaffold1674; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 311
Target Start/End: Complemental strand, 95 - 53
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  95 tgttgtagtatgactcaaaatttgatggatggagaatattgtt 53  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 311
Target Start/End: Original strand, 51709 - 51751
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  51709 tgttgtagtatgactcaaaatttgatggatggagaataatgtt 51751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 311
Target Start/End: Original strand, 50159 - 50201
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    ||||||||||||||||||||||||||||||| |||||| ||||    
T  50159 tgttgtagtatgactcaaaatttgatggatgaagaataatgtt 50201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 311
Target Start/End: Original strand, 15551925 - 15551967
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  15551925 tgttgtagtatgactcaaaatttgatggatggagaatattgtt 15551967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 311
Target Start/End: Original strand, 18466411 - 18466453
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  18466411 tgttgtagtatgactcaaaatttgatggatggagaatattgtt 18466453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 311
Target Start/End: Original strand, 25803707 - 25803749
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  25803707 tgttgtagtatgactcaaaatttgatggatggagaatattgtt 25803749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 311
Target Start/End: Original strand, 26097421 - 26097463
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  26097421 tgttgtagtatgactcaaaatttgatggatggagaatattgtt 26097463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 311
Target Start/End: Original strand, 27912219 - 27912261
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  27912219 tgttgtagtatgactcaaaatttgatggatggagaatattgtt 27912261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 306
Target Start/End: Original strand, 18468698 - 18468735
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaata 306  Q
    ||||||||||||||||||||||||||||||||||||||    
T  18468698 tgttgtagtatgactcaaaatttgatggatggagaata 18468735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 306
Target Start/End: Complemental strand, 26098841 - 26098804
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaata 306  Q
    ||||||||||||||||||||||||||||||||||||||    
T  26098841 tgttgtagtatgactcaaaatttgatggatggagaata 26098804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 306
Target Start/End: Original strand, 27910135 - 27910172
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaata 306  Q
    ||||||||||||||||||||||||||||||||||||||    
T  27910135 tgttgtagtatgactcaaaatttgatggatggagaata 27910172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 268 - 311
Target Start/End: Original strand, 15143219 - 15143262
Alignment:
Q  268 ttgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  15143219 ttgttatagtatgactcaaaatttgatggatggagaatattgtt 15143262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 272 - 311
Target Start/End: Complemental strand, 18509904 - 18509865
Alignment:
Q  272 tgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  18509904 tgtagtatgactcaaaatttgatggatggagaatattgtt 18509865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 268 - 311
Target Start/End: Original strand, 18596325 - 18596368
Alignment:
Q  268 ttgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||| |||||||||||||||||||||||||||||| ||||    
T  18596325 ttgttgtactatgactcaaaatttgatggatggagaatattgtt 18596368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 268 - 311
Target Start/End: Original strand, 21288528 - 21288571
Alignment:
Q  268 ttgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||| |||||||||||||||||||||||||| ||||    
T  21288528 ttgttgtagtataactcaaaatttgatggatggagaatattgtt 21288571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 311
Target Start/End: Complemental strand, 3373630 - 3373588
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    ||||||||||||||||| |||||||||||||||||||| ||||    
T  3373630 tgttgtagtatgactcagaatttgatggatggagaatattgtt 3373588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 311
Target Start/End: Complemental strand, 18511800 - 18511760
Alignment:
Q  271 ttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    ||||||||||||||||||||||||||||| |||||| ||||    
T  18511800 ttgtagtatgactcaaaatttgatggatgaagaatattgtt 18511760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 311
Target Start/End: Complemental strand, 23452829 - 23452787
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  23452829 tgttgtagtatgactcaaaatttgatggatggagaatattgtt 23452787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 311
Target Start/End: Complemental strand, 42924094 - 42924052
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  42924094 tgttgtagtatgactcaaaatttgatggatggagaatattgtt 42924052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 268 - 311
Target Start/End: Complemental strand, 35218566 - 35218523
Alignment:
Q  268 ttgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||||||||||||||||||| |||||| ||||    
T  35218566 ttgttgtagtatgactcaaaatttgatggatgaagaatattgtt 35218523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 268 - 306
Target Start/End: Complemental strand, 27136506 - 27136468
Alignment:
Q  268 ttgttgtagtatgactcaaaatttgatggatggagaata 306  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  27136506 ttgttgtagtatgactcaaaatttgatggatgaagaata 27136468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 311
Target Start/End: Complemental strand, 35216184 - 35216142
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    ||||||||||||||||||||||||||||||| |||||| ||||    
T  35216184 tgttgtagtatgactcaaaatttgatggatgaagaatattgtt 35216142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 268 - 311
Target Start/End: Original strand, 42452448 - 42452491
Alignment:
Q  268 ttgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||||| ||||||||||||||| |||||| ||||    
T  42452448 ttgttgtagtatgacttaaaatttgatggatgaagaatattgtt 42452491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 311
Target Start/End: Complemental strand, 27583907 - 27583865
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    ||||||||||||||||||| ||||||||||| |||||| ||||    
T  27583907 tgttgtagtatgactcaaattttgatggatgaagaatattgtt 27583865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 270 - 311
Target Start/End: Complemental strand, 2184 - 2143
Alignment:
Q  270 gttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  2184 gttgtagtatgactcaaaatttgatggatggagaatattgtt 2143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 268 - 311
Target Start/End: Complemental strand, 12062 - 12019
Alignment:
Q  268 ttgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    |||||||||||||| |||||||||||||||||||||||| ||||    
T  12062 ttgttgtagtatgattcaaaatttgatggatggagaatattgtt 12019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 311
Target Start/End: Original strand, 78883 - 78925
Alignment:
Q  269 tgttgtagtatgactcaaaatttgatggatggagaatagtgtt 311  Q
    ||||||||||||||| |||||||||||||||||||||| ||||    
T  78883 tgttgtagtatgacttaaaatttgatggatggagaatattgtt 78925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University