View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14713_low_49 (Length: 309)
Name: NF14713_low_49
Description: NF14713
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14713_low_49 |
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Alignment Details
Target: chr4 (Bit Score: 263; Significance: 1e-146; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 20 - 298
Target Start/End: Original strand, 36714657 - 36714935
Alignment:
| Q |
20 |
tcattaaaatctgtcacttatattaacatgtttggtatcaatgtctttttctgaaatcatggtgacgtggtgattttgttttgtttaaactttagaatgt |
119 |
Q |
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| T |
36714657 |
tcattaaaatctgtcacttatattaacatgtttggtatcaatgtctttttctgaaatcatggtgacgtggtgattttgttttgttcaaactttagaatgt |
36714756 |
T |
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| Q |
120 |
acgttgttttgttagattttacaaactcataatggttcatcttgattctgtcaaatcggacacgtgactatgtcaaatcaaacaaatttgttttaaaata |
219 |
Q |
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| T |
36714757 |
acgttgttttgttagattttacaaactcataatggttcatcgtgattctgtcaaatcggacacgtgactatgtcaaatcaaacaaatttgttttaaaata |
36714856 |
T |
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| Q |
220 |
attaactaaagacttaatataatgatgaaactttcaaaagaattaaataaagattttcattactgttcttttgagtatt |
298 |
Q |
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|||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
36714857 |
attaactaaagacttaatataatgatgaaacttttaaaagaattaaataaagactttcattactgttcttttgagtatt |
36714935 |
T |
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