View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14713_low_55 (Length: 285)
Name: NF14713_low_55
Description: NF14713
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14713_low_55 |
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Alignment Details
Target: chr3 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 1 - 269
Target Start/End: Complemental strand, 38707155 - 38706887
Alignment:
| Q |
1 |
aaatgttaaacaattaatacttaagcaagttgactgcttgtccttaatttatacggttgcataaggacttggtcacttttcttttactcccctcaccgat |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38707155 |
aaatgttaaacaattaatacttaagcaagttgactgcttgtccttaatttataccgttgcataaggacttggtcacttttcttttactcccctcaccgat |
38707056 |
T |
|
| Q |
101 |
aaaatcataactagcaactaacatttgccattagaaaagttatgtcataccttggcatcgcttgcggcaaagaaactttcttcaacctcagaaacatcca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38707055 |
aaaatcataactagcaactaacatttgccattagaaaagttatgtcataccttggcatcgcttgcggcaaagaaactttcttcaacctcagaaacatcca |
38706956 |
T |
|
| Q |
201 |
tcattcacatccactgtgtaaacttgggtcctaaatgatctcaattgtatccagagttaatcaagaaag |
269 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
38706955 |
tcattcacatccactgtgtaaacttgggtcctaaatgatctcaattgtatccagatttaatcaagaaag |
38706887 |
T |
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