View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14713_low_76 (Length: 236)
Name: NF14713_low_76
Description: NF14713
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14713_low_76 |
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Alignment Details
Target: chr2 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 15030048 - 15030268
Alignment:
| Q |
1 |
ttgacatattataaatctaatttgaccaaatcatatttaaccactcttgtgtctcaaactaccaaactttgcttaaaagctcaaactatttaatatagac |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
15030048 |
ttgacatattataaatctaatttgaccaaatcatatttaaccactcttgtgtctcaaactaccaaactttgcttaaaagatcaaactatttaatatagac |
15030147 |
T |
|
| Q |
101 |
gtaaactaattgttattaagaacttgataatatagaaatgatgcagaaaaagtatttttagagcctttttaatgttactatgttaaaagacatattgcct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
15030148 |
gtaaactaattgttattaagaacttgataatatagaaatgatgcagaaaaagtatttttaaagcctttttaatgttactatgttaaaagacatattgcct |
15030247 |
T |
|
| Q |
201 |
ttactttttactcttttaaat |
221 |
Q |
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||||||||||||||||||||| |
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| T |
15030248 |
ttactttttactcttttaaat |
15030268 |
T |
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