View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14713_low_85 (Length: 208)
Name: NF14713_low_85
Description: NF14713
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14713_low_85 |
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Alignment Details
Target: chr8 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 44 - 193
Target Start/End: Original strand, 5796170 - 5796319
Alignment:
| Q |
44 |
catccaatcatgctatttatcataaaaacaaactattctaggatgtagtctaagaagctccaactaatcgagtcaccggccttttcaatatccactttta |
143 |
Q |
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| T |
5796170 |
catccaatcatgctatttatcataaaaacaaactattctaggatgtagtctaagaagctccaactaatcgagtcaccggccttttcaatatccactttta |
5796269 |
T |
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| Q |
144 |
atatcaagcattcttccttctttttctttgccaaatctaccacttctttt |
193 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5796270 |
atatcaagcattcttccttctttttctttgccaaatctaccacttctttt |
5796319 |
T |
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