View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14714_high_3 (Length: 381)
Name: NF14714_high_3
Description: NF14714
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14714_high_3 |
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Alignment Details
Target: chr1 (Bit Score: 349; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 349; E-Value: 0
Query Start/End: Original strand, 18 - 370
Target Start/End: Complemental strand, 12250680 - 12250328
Alignment:
| Q |
18 |
attttagcgacggacatttaagtcccgagaaaggttgggtttttaacgcttttgttcgatcttactttgcttatttggatcaaagatcggtaattttgag |
117 |
Q |
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| T |
12250680 |
attttagcgacggacatttaagtcccgagaaaggttgggtttttaacgcttttgttcgatcttactttgcttatttggatcaaagatcggtaattttgag |
12250581 |
T |
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| Q |
118 |
ggaggaggcaaataaattacaaaacaaaaaaggaaaggaaagtgaagaaattccattgattgaagagttgaagaatttggaggagttacaaaaattgatt |
217 |
Q |
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| T |
12250580 |
ggaggaggcaaataaattacaaaacaaaaaaggaaaggaaagtgaagaaattccattgattgaagagttgaagaatttggaggagttacaaaaattgatt |
12250481 |
T |
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| Q |
218 |
gatatgttgttacaaataaaacctaagagtgaaatgagtatgaaaattgttcttattcttgaagcaatggattgtgtgatggatgagattttggaagttt |
317 |
Q |
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| T |
12250480 |
gatatgttgttacaaataaaacctaagagtgaaatgagtatgaaaattgttcttattctagaagcaatggattgtgtgatggatgagattttggaagttt |
12250381 |
T |
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| Q |
318 |
atggtaaattttccaaagagattaaccgtgtattgttaagggtttgtgatatt |
370 |
Q |
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| T |
12250380 |
atggtaaattttccaaagagattaaccgtgtattgttaagggtttgtgatatt |
12250328 |
T |
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