View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14716_high_10 (Length: 296)
Name: NF14716_high_10
Description: NF14716
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14716_high_10 |
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Alignment Details
Target: chr8 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 12 - 278
Target Start/End: Complemental strand, 43061606 - 43061340
Alignment:
| Q |
12 |
gaagaatattcataaagcattgtaattgagggagttcctgtattcaatttcaaacaaactgtggtgaaatgtgaagtatgaaatgaaataattcaggttg |
111 |
Q |
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| T |
43061606 |
gaagaatattcataaagcattgtaattgagggagttcctgtattcaatttcaaacaaactgtggtgaaatgtgaagtatgaaatgaaatatttcaggttg |
43061507 |
T |
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| Q |
112 |
tagaaattagaattacaaaatggttttactacatttgtgcctacctagctccatgtggttcttactcaattttgttaaacatttcattactaaacatgac |
211 |
Q |
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| T |
43061506 |
tagaaattagaattacaaaatggttttactacagttgtgcctacctagctccatgtggttcttactcaactttgttaaacatatcattactaaacatgac |
43061407 |
T |
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| Q |
212 |
ttgctaccttgtggtttgattagtgtcataatattgattgaaaattgttttgacctcaagttagatg |
278 |
Q |
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| T |
43061406 |
ttgctaccttgtggtttgattagtgtcataatattgattgaaaattgttctgacctcaagttagatg |
43061340 |
T |
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