View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14716_high_13 (Length: 247)
Name: NF14716_high_13
Description: NF14716
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14716_high_13 |
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Alignment Details
Target: chr7 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 13 - 246
Target Start/End: Complemental strand, 36702322 - 36702087
Alignment:
| Q |
13 |
attaggaggcaaaattgcatttaggcctaatnnnnnnnnn--gtgaacatgttatatacctggtcattagaatcataaacgagtttatgaccataatatt |
110 |
Q |
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| T |
36702322 |
attaggaggcaaaattgcatttaggcctaataaaaaaaaaaagtgaacatgttatatacctggtcattagaatcataaacgagtttatgaccataatatt |
36702223 |
T |
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| Q |
111 |
gagcgtcgtcattgctacctacttgtcttcgatcatcgtggctagttgttccaatgccatcactcccagttttagggttctgtgataacattctcaagga |
210 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
36702222 |
gagcgtcgtcattgctacctacttgtcttcgatcatcgtggctagttgttccaataccatcactcccagttttagggttctgtgataacattctgaagga |
36702123 |
T |
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| Q |
211 |
agaaggagttcttggtgagaagccaatttgattgtt |
246 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
36702122 |
agaaggagttcttggtgagaagccaatttgattgtt |
36702087 |
T |
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