View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14716_low_10 (Length: 310)

Name: NF14716_low_10
Description: NF14716
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14716_low_10
NF14716_low_10
[»] scaffold0009 (2 HSPs)
scaffold0009 (1-97)||(49502-49598)
scaffold0009 (38-94)||(49579-49635)
[»] chr7 (39 HSPs)
chr7 (1-98)||(46840856-46840953)
chr7 (1-97)||(1565766-1565862)
chr7 (1-96)||(1738484-1738579)
chr7 (1-96)||(7240747-7240842)
chr7 (1-95)||(38063950-38064044)
chr7 (1-94)||(31319436-31319529)
chr7 (1-96)||(9268754-9268849)
chr7 (1-95)||(7482224-7482318)
chr7 (1-94)||(23314176-23314269)
chr7 (1-94)||(36583395-36583488)
chr7 (1-96)||(22285697-22285792)
chr7 (5-95)||(28536792-28536882)
chr7 (1-94)||(94355-94448)
chr7 (1-94)||(36016233-36016326)
chr7 (1-94)||(38441460-38441553)
chr7 (5-95)||(4790247-4790337)
chr7 (1-78)||(33418392-33418469)
chr7 (1-88)||(40840156-40840243)
chr7 (1-97)||(9575406-9575502)
chr7 (48-96)||(1738445-1738493)
chr7 (48-96)||(7240833-7240881)
chr7 (2-94)||(7269443-7269535)
chr7 (48-96)||(7482309-7482357)
chr7 (48-95)||(9268840-9268887)
chr7 (48-94)||(22285783-22285829)
chr7 (48-94)||(23314139-23314185)
chr7 (48-94)||(38441544-38441590)
chr7 (48-94)||(46840944-46840990)
chr7 (48-88)||(33418460-33418500)
chr7 (48-96)||(36583479-36583527)
chr7 (48-96)||(38063911-38063959)
chr7 (48-95)||(4790332-4790379)
chr7 (48-87)||(40840126-40840165)
chr7 (40-87)||(46877666-46877713)
chr7 (48-94)||(94318-94364)
chr7 (48-94)||(31319399-31319445)
chr7 (65-98)||(7107750-7107783)
chr7 (50-94)||(9575495-9575539)
chr7 (48-84)||(36016206-36016242)
[»] chr3 (60 HSPs)
chr3 (1-97)||(44785433-44785529)
chr3 (1-96)||(4238592-4238687)
chr3 (1-96)||(22721929-22722024)
chr3 (1-95)||(19557089-19557183)
chr3 (1-95)||(49823418-49823512)
chr3 (1-94)||(10297979-10298072)
chr3 (1-97)||(8817423-8817519)
chr3 (1-96)||(8437423-8437518)
chr3 (1-96)||(21295363-21295458)
chr3 (1-96)||(34080067-34080162)
chr3 (1-96)||(38964390-38964485)
chr3 (1-98)||(9111531-9111628)
chr3 (1-94)||(17653712-17653805)
chr3 (1-94)||(37508921-37509014)
chr3 (1-94)||(48340397-48340490)
chr3 (4-96)||(2787872-2787964)
chr3 (1-96)||(40691033-40691128)
chr3 (1-96)||(42507392-42507487)
chr3 (1-95)||(36095717-36095811)
chr3 (1-95)||(46208029-46208123)
chr3 (1-94)||(51406673-51406766)
chr3 (1-96)||(42170383-42170478)
chr3 (5-94)||(35513473-35513562)
chr3 (1-87)||(33942969-33943055)
chr3 (1-89)||(6013373-6013461)
chr3 (1-97)||(9213513-9213609)
chr3 (48-97)||(17653796-17653845)
chr3 (9-82)||(43323072-43323145)
chr3 (48-95)||(4238678-4238725)
chr3 (48-95)||(37509005-37509052)
chr3 (48-95)||(46208114-46208161)
chr3 (11-77)||(8951943-8952009)
chr3 (48-94)||(21295326-21295372)
chr3 (48-97)||(10298063-10298112)
chr3 (39-88)||(33128212-33128261)
chr3 (48-97)||(40690993-40691042)
chr3 (1-95)||(5323205-5323300)
chr3 (1-79)||(29285797-29285873)
chr3 (48-95)||(49823380-49823427)
chr3 (48-94)||(6013336-6013382)
chr3 (1-87)||(8092595-8092681)
chr3 (36-94)||(9213588-9213646)
chr3 (48-94)||(19557052-19557098)
chr3 (48-94)||(34080030-34080076)
chr3 (48-94)||(38964476-38964522)
chr3 (48-94)||(48340481-48340527)
chr3 (48-97)||(9027139-9027188)
chr3 (48-89)||(9111499-9111540)
chr3 (48-89)||(42507360-42507401)
chr3 (50-95)||(51406759-51406804)
chr3 (48-96)||(8817384-8817432)
chr3 (48-95)||(8437509-8437556)
chr3 (48-87)||(22722015-22722054)
chr3 (41-84)||(26001141-26001184)
chr3 (48-94)||(2787832-2787878)
chr3 (48-94)||(44785396-44785442)
chr3 (26-94)||(2131734-2131802)
chr3 (1-97)||(26019517-26019612)
chr3 (48-84)||(42170356-42170392)
chr3 (40-96)||(45652067-45652123)
[»] chr2 (53 HSPs)
chr2 (1-97)||(41478676-41478772)
chr2 (1-96)||(37990050-37990145)
chr2 (1-95)||(3055557-3055651)
chr2 (1-95)||(15896841-15896935)
chr2 (1-95)||(44397546-44397640)
chr2 (1-95)||(44398685-44398779)
chr2 (1-94)||(13197747-13197840)
chr2 (3-95)||(4683971-4684063)
chr2 (1-97)||(13344481-13344577)
chr2 (1-95)||(16243820-16243914)
chr2 (1-95)||(38917559-38917653)
chr2 (1-94)||(6648556-6648649)
chr2 (1-94)||(16044354-16044447)
chr2 (1-94)||(37666647-37666740)
chr2 (1-96)||(15372224-15372319)
chr2 (1-95)||(9047792-9047886)
chr2 (1-94)||(12337974-12338067)
chr2 (1-92)||(30099219-30099310)
chr2 (1-83)||(41492933-41493015)
chr2 (1-94)||(12170436-12170529)
chr2 (2-66)||(44804616-44804680)
chr2 (2-75)||(16734802-16734875)
chr2 (4-63)||(41453090-41453149)
chr2 (14-88)||(31150659-31150733)
chr2 (48-96)||(41492894-41492942)
chr2 (48-98)||(3055642-3055692)
chr2 (1-98)||(13724139-13724236)
chr2 (48-97)||(37990010-37990059)
chr2 (48-96)||(6648517-6648565)
chr2 (48-96)||(9047753-9047801)
chr2 (48-96)||(41478637-41478685)
chr2 (1-84)||(36688892-36688975)
chr2 (48-95)||(38917521-38917568)
chr2 (48-95)||(44398770-44398817)
chr2 (48-94)||(12337937-12337983)
chr2 (48-94)||(13197710-13197756)
chr2 (36-94)||(13724102-13724160)
chr2 (48-94)||(15372310-15372356)
chr2 (48-94)||(15896926-15896972)
chr2 (1-95)||(30852654-30852748)
chr2 (23-79)||(4553069-4553125)
chr2 (48-96)||(16243781-16243829)
chr2 (36-96)||(23227344-23227404)
chr2 (48-96)||(37666608-37666656)
chr2 (48-95)||(13344568-13344615)
chr2 (48-95)||(30099181-30099228)
chr2 (48-95)||(44397631-44397678)
chr2 (48-94)||(16044317-16044363)
chr2 (48-89)||(44804583-44804624)
chr2 (40-96)||(10069283-10069339)
chr2 (5-89)||(16561042-16561126)
chr2 (48-80)||(36089457-36089489)
chr2 (1-85)||(45294333-45294416)
[»] scaffold0204 (2 HSPs)
scaffold0204 (1-96)||(23783-23878)
scaffold0204 (48-96)||(23869-23917)
[»] chr8 (49 HSPs)
chr8 (1-96)||(54649-54744)
chr8 (1-96)||(2890199-2890294)
chr8 (1-96)||(7785815-7785910)
chr8 (1-95)||(43199391-43199485)
chr8 (1-94)||(3304315-3304408)
chr8 (1-94)||(6552655-6552748)
chr8 (1-94)||(12343177-12343270)
chr8 (4-96)||(7805739-7805831)
chr8 (1-95)||(12763691-12763785)
chr8 (1-94)||(15888389-15888482)
chr8 (1-94)||(31654613-31654706)
chr8 (1-94)||(32114512-32114605)
chr8 (1-94)||(39571240-39571333)
chr8 (5-94)||(44498228-44498317)
chr8 (1-96)||(33289298-33289393)
chr8 (1-95)||(25601037-25601131)
chr8 (1-95)||(32211400-32211494)
chr8 (1-94)||(7012171-7012264)
chr8 (1-95)||(13578856-13578950)
chr8 (32-97)||(4245649-4245714)
chr8 (5-94)||(8587170-8587259)
chr8 (6-91)||(28463614-28463699)
chr8 (1-98)||(24692016-24692112)
chr8 (5-89)||(17006916-17007000)
chr8 (5-89)||(17570247-17570331)
chr8 (40-96)||(27422266-27422322)
chr8 (40-95)||(25600999-25601054)
chr8 (48-98)||(39571199-39571249)
chr8 (48-96)||(7785776-7785824)
chr8 (48-95)||(54611-54658)
chr8 (48-95)||(2890161-2890208)
chr8 (50-97)||(32211360-32211407)
chr8 (48-99)||(33289256-33289307)
chr8 (48-95)||(43199353-43199400)
chr8 (48-94)||(6552739-6552785)
chr8 (48-102)||(7012255-7012309)
chr8 (37-87)||(13246801-13246851)
chr8 (48-97)||(12763651-12763700)
chr8 (9-82)||(24203018-24203091)
chr8 (48-96)||(7805697-7805745)
chr8 (48-88)||(12343146-12343186)
chr8 (48-96)||(44498185-44498233)
chr8 (61-96)||(6899417-6899452)
chr8 (50-97)||(32114472-32114519)
chr8 (1-96)||(33057592-33057687)
chr8 (48-94)||(3304278-3304324)
chr8 (5-79)||(28999089-28999163)
chr8 (48-94)||(31654697-31654743)
chr8 (48-97)||(15888349-15888398)
[»] chr6 (41 HSPs)
chr6 (1-96)||(8383006-8383101)
chr6 (1-95)||(2830334-2830428)
chr6 (1-95)||(11572182-11572276)
chr6 (1-94)||(6330115-6330208)
chr6 (1-94)||(26602323-26602416)
chr6 (1-96)||(13853630-13853725)
chr6 (5-96)||(33052835-33052926)
chr6 (1-95)||(8099529-8099623)
chr6 (1-95)||(6143553-6143647)
chr6 (1-95)||(35031038-35031132)
chr6 (1-94)||(9644696-9644789)
chr6 (1-94)||(9650713-9650806)
chr6 (1-96)||(6068564-6068659)
chr6 (1-96)||(8417830-8417925)
chr6 (2-94)||(13043758-13043850)
chr6 (1-78)||(28747171-28747248)
chr6 (1-86)||(6068977-6069062)
chr6 (1-94)||(22896471-22896555)
chr6 (1-64)||(17992018-17992081)
chr6 (1-96)||(3788034-3788130)
chr6 (1-89)||(14936494-14936582)
chr6 (5-79)||(7597018-7597092)
chr6 (38-95)||(3788111-3788168)
chr6 (48-97)||(8099614-8099663)
chr6 (48-97)||(9644780-9644829)
chr6 (48-97)||(9650797-9650846)
chr6 (48-96)||(26602407-26602455)
chr6 (48-95)||(6330199-6330246)
chr6 (48-95)||(11572144-11572191)
chr6 (48-95)||(13853592-13853639)
chr6 (48-94)||(2830419-2830465)
chr6 (37-75)||(6549902-6549940)
chr6 (48-94)||(8382969-8383015)
chr6 (50-95)||(35031000-35031045)
chr6 (48-95)||(6068650-6068697)
chr6 (48-94)||(8417793-8417839)
chr6 (48-98)||(33052790-33052840)
chr6 (50-83)||(12473651-12473684)
chr6 (50-94)||(17992074-17992118)
chr6 (67-99)||(22880912-22880944)
chr6 (67-99)||(22898847-22898879)
[»] chr5 (44 HSPs)
chr5 (1-96)||(37148992-37149087)
chr5 (1-94)||(9395350-9395443)
chr5 (1-97)||(36563575-36563671)
chr5 (1-96)||(582987-583082)
chr5 (1-95)||(23359941-23360035)
chr5 (1-95)||(41989444-41989538)
chr5 (1-94)||(11795168-11795261)
chr5 (1-96)||(20848072-20848167)
chr5 (1-95)||(13033050-13033144)
chr5 (1-95)||(13103023-13103117)
chr5 (1-97)||(17025621-17025717)
chr5 (5-94)||(26350391-26350480)
chr5 (1-97)||(4443957-4444053)
chr5 (5-96)||(37641951-37642043)
chr5 (1-70)||(21575970-21576039)
chr5 (1-73)||(6126845-6126917)
chr5 (23-95)||(38361750-38361822)
chr5 (6-87)||(13539909-13539986)
chr5 (5-95)||(2629585-2629675)
chr5 (2-80)||(3549585-3549663)
chr5 (48-94)||(23360026-23360072)
chr5 (1-94)||(39290775-39290867)
chr5 (48-97)||(41989404-41989453)
chr5 (48-96)||(9395434-9395482)
chr5 (48-96)||(13103108-13103156)
chr5 (48-95)||(17025708-17025755)
chr5 (48-95)||(36563537-36563584)
chr5 (48-94)||(6126908-6126954)
chr5 (50-88)||(11574166-11574204)
chr5 (40-89)||(966224-966273)
chr5 (1-45)||(35904448-35904490)
chr5 (48-96)||(13033135-13033183)
chr5 (48-95)||(11795252-11795299)
chr5 (48-95)||(21576030-21576077)
chr5 (48-95)||(37642038-37642085)
chr5 (5-79)||(40138831-40138906)
chr5 (5-87)||(27080981-27081063)
chr5 (48-94)||(37148955-37149001)
chr5 (1-59)||(39030590-39030648)
chr5 (1-70)||(2366375-2366444)
chr5 (39-88)||(3549553-3549602)
chr5 (48-89)||(4444044-4444085)
chr5 (36-80)||(2366352-2366396)
chr5 (50-86)||(36595782-36595818)
[»] chr4 (58 HSPs)
chr4 (1-96)||(3372119-3372214)
chr4 (1-96)||(47833609-47833704)
chr4 (1-96)||(48336261-48336356)
chr4 (1-96)||(3992974-3993069)
chr4 (1-96)||(42797730-42797825)
chr4 (1-95)||(3904720-3904814)
chr4 (1-94)||(6121930-6122023)
chr4 (1-94)||(20538723-20538816)
chr4 (1-94)||(24704370-24704463)
chr4 (5-94)||(53337370-53337459)
chr4 (3-95)||(33551200-33551292)
chr4 (2-97)||(43900546-43900641)
chr4 (1-95)||(7579309-7579403)
chr4 (1-95)||(47838654-47838748)
chr4 (1-94)||(5986876-5986969)
chr4 (1-94)||(46797725-46797818)
chr4 (1-94)||(52756675-52756768)
chr4 (3-95)||(26231576-26231668)
chr4 (1-96)||(51894619-51894714)
chr4 (1-95)||(33621795-33621889)
chr4 (1-97)||(41469803-41469899)
chr4 (1-95)||(40913226-40913320)
chr4 (1-82)||(41615713-41615794)
chr4 (1-82)||(3422073-3422153)
chr4 (3-95)||(25855082-25855174)
chr4 (1-83)||(29845656-29845738)
chr4 (40-94)||(4780371-4780425)
chr4 (1-79)||(50430455-50430533)
chr4 (16-88)||(17236839-17236912)
chr4 (1-88)||(17344219-17344306)
chr4 (48-94)||(42797816-42797862)
chr4 (48-96)||(3422144-3422192)
chr4 (48-96)||(41469764-41469812)
chr4 (48-96)||(47838615-47838663)
chr4 (40-95)||(24704446-24704501)
chr4 (38-88)||(5986950-5987000)
chr4 (48-94)||(6121893-6121939)
chr4 (1-79)||(31013036-31013114)
chr4 (48-94)||(46797809-46797855)
chr4 (48-94)||(47833695-47833741)
chr4 (48-94)||(51894582-51894628)
chr4 (50-95)||(3904682-3904727)
chr4 (48-89)||(40913194-40913235)
chr4 (50-94)||(20538686-20538730)
chr4 (48-96)||(33621880-33621928)
chr4 (48-96)||(48336347-48336395)
chr4 (48-95)||(3993060-3993107)
chr4 (4-83)||(6924724-6924802)
chr4 (48-95)||(53337454-53337501)
chr4 (48-94)||(3372205-3372251)
chr4 (48-94)||(7579394-7579440)
chr4 (48-94)||(43900633-43900679)
chr4 (48-94)||(44900080-44900126)
chr4 (38-87)||(41615683-41615732)
chr4 (1-80)||(9876653-9876732)
chr4 (40-80)||(32822285-32822325)
chr4 (69-97)||(47866032-47866060)
chr4 (62-98)||(55292107-55292143)
[»] chr1 (52 HSPs)
chr1 (1-96)||(26471102-26471197)
chr1 (1-96)||(27159395-27159490)
chr1 (1-96)||(44668130-44668225)
chr1 (1-95)||(9981646-9981740)
chr1 (1-98)||(14984833-14984930)
chr1 (1-94)||(31842832-31842925)
chr1 (1-94)||(39402003-39402096)
chr1 (1-94)||(47216736-47216829)
chr1 (1-97)||(11795930-11796026)
chr1 (1-96)||(12483665-12483760)
chr1 (1-95)||(34042695-34042789)
chr1 (1-94)||(23278038-23278131)
chr1 (1-94)||(44955243-44955336)
chr1 (1-94)||(1050888-1050981)
chr1 (1-94)||(47777518-47777611)
chr1 (1-96)||(47588374-47588469)
chr1 (1-88)||(47969700-47969788)
chr1 (1-95)||(17556751-17556846)
chr1 (1-96)||(25694317-25694412)
chr1 (1-95)||(11897053-11897147)
chr1 (1-95)||(16448145-16448239)
chr1 (1-95)||(12213511-12213605)
chr1 (48-98)||(11897138-11897188)
chr1 (5-79)||(11989796-11989870)
chr1 (40-95)||(37552217-37552272)
chr1 (38-96)||(12483626-12483684)
chr1 (13-94)||(37552141-37552222)
chr1 (48-96)||(14984921-14984969)
chr1 (48-88)||(44955212-44955252)
chr1 (48-95)||(17556837-17556884)
chr1 (48-95)||(25694403-25694450)
chr1 (48-94)||(11796017-11796063)
chr1 (48-94)||(27159358-27159404)
chr1 (48-94)||(31842795-31842841)
chr1 (48-94)||(39401966-39402012)
chr1 (48-94)||(44668093-44668139)
chr1 (48-94)||(47777481-47777527)
chr1 (48-97)||(1050972-1051021)
chr1 (48-89)||(9981731-9981772)
chr1 (48-97)||(34042780-34042829)
chr1 (48-95)||(47216698-47216745)
chr1 (67-97)||(9302041-9302071)
chr1 (48-94)||(26471065-26471111)
chr1 (61-95)||(47678371-47678405)
chr1 (36-85)||(5392218-5392267)
chr1 (2-71)||(11774536-11774605)
chr1 (1-82)||(12043616-12043696)
chr1 (1-58)||(29855085-29855142)
chr1 (58-95)||(39720779-39720816)
chr1 (1-45)||(1598418-1598461)
chr1 (40-84)||(12062635-12062679)
chr1 (38-94)||(19391948-19392004)
[»] scaffold0482 (2 HSPs)
scaffold0482 (4-96)||(12858-12950)
scaffold0482 (48-96)||(12944-12992)
[»] scaffold1707 (1 HSPs)
scaffold1707 (1-95)||(1334-1428)
[»] scaffold0464 (2 HSPs)
scaffold0464 (1-94)||(6168-6261)
scaffold0464 (48-96)||(6129-6177)
[»] scaffold0650 (1 HSPs)
scaffold0650 (1-95)||(22-115)
[»] scaffold0415 (1 HSPs)
scaffold0415 (10-83)||(13773-13845)
[»] scaffold0011 (2 HSPs)
scaffold0011 (1-94)||(231340-231433)
scaffold0011 (48-98)||(231299-231349)
[»] scaffold0171 (1 HSPs)
scaffold0171 (1-89)||(12390-12478)


Alignment Details
Target: scaffold0009 (Bit Score: 97; Significance: 1e-47; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 49598 - 49502
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 97  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49598 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 49502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 49579 - 49635
Alignment:
Q  38 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  49579 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 49635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 94; Significance: 7e-46; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 46840953 - 46840856
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatttg 98  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46840953 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatttg 46840856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 1565766 - 1565862
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 97  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1565766 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 1565862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 1738484 - 1738579
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1738484 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 1738579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 7240842 - 7240747
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7240842 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 7240747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 38063950 - 38064044
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38063950 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 38064044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 31319436 - 31319529
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31319436 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 31319529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 9268849 - 9268754
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  9268849 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccagaggtagtatt 9268754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 7482318 - 7482224
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7482318 caacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 7482224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 23314176 - 23314269
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23314176 caacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 23314269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 36583488 - 36583395
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36583488 caacaaaagttgatgtatctagttaaaaattaagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 36583395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 22285792 - 22285697
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22285792 caacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 22285697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 28536792 - 28536882
Alignment:
Q  5 aaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28536792 aaaagttgatgtatctagttaaaaattcattccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 28536882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 94355 - 94448
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  94355 caacaaaagttgatgtatctagttaaaaattctgtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagatagta 94448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 36016233 - 36016326
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  36016233 caacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 36016326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 38441553 - 38441460
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  38441553 caacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacataaatttctcttataaataggaccggaggtagta 38441460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 4790337 - 4790247
Alignment:
Q  5 aaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    |||||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  4790337 aaaagttgatgtatctagttaaaaatttagtccaaatacattcatttttgttgacctaaatttttcttataaataggaccggaggtagtat 4790247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 33418469 - 33418392
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 78  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  33418469 caacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaaaaat 33418392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 40840156 - 40840243
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 88  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| | ||||||| || ||| |||||||| |||||||||||||||    
T  40840156 caacaaaagttgatgtacttagttaaaaattcagtccaaatacattgatttttgttaacttaactttctcttctaaataggaccggag 40840243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 9575502 - 9575406
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 97  Q
    |||||||| ||||||||| ||||||||||||||||| |||||| || ||||||||||||| || ||||||||| |||||||||| |||| |||||||    
T  9575502 caacaaaacttgatgtatctagttaaaaattcagtctaaatacgttaacttttgttgacccaactttctcttacaaataggaccagagggagtattt 9575406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 1738493 - 1738445
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  1738493 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 1738445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 7240833 - 7240881
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  7240833 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 7240881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 2 - 94
Target Start/End: Original strand, 7269443 - 7269535
Alignment:
Q  2 aacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||| || | ||||||||||||||  | ||||||  | ||||||||||| || ||| ||||||||||| ||||||||| ||||    
T  7269443 aacaaaagttgatgcatctggttaaaaattcagtttagatacatcaatttttgttgacccaactttttcttataaataagaccggagggagta 7269535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 7482309 - 7482357
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  7482309 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 7482357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 9268840 - 9268887
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  9268840 acttttgttgacccaaaattctcttataaataggaccggagggagtat 9268887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 22285783 - 22285829
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  22285783 acttttgttgacccaaaattctcttataaataggaccggagggagta 22285829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 23314185 - 23314139
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  23314185 acttttgttgacccaaaattctcttataaataggaccggagggagta 23314139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 38441544 - 38441590
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  38441544 acttttgttgacccaaaattctcttataaataggaccggaggaagta 38441590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 46840944 - 46840990
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  46840944 acttttgttgacccaaaattctcttataaataggaccggagggagta 46840990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 88
Target Start/End: Original strand, 33418460 - 33418500
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggag 88  Q
    ||||||||||||| ||| |||||||||||||||||||||||    
T  33418460 acttttgttgacccaaaattctcttataaataggaccggag 33418500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 36583479 - 36583527
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    ||||||||||||| ||| ||||||||||||||||| |||||| ||||||    
T  36583479 acttttgttgacccaaaattctcttataaataggatcggagggagtatt 36583527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 38063959 - 38063911
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    ||||||||||||| ||| ||||||||||||||||||| |||| ||||||    
T  38063959 acttttgttgacccaaaattctcttataaataggaccagagggagtatt 38063911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 4790332 - 4790379
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    |||||| |||||| ||| |||||||||||||||||||||||| |||||    
T  4790332 acttttattgacccaaaattctcttataaataggaccggaggaagtat 4790379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 87
Target Start/End: Complemental strand, 40840165 - 40840126
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccgga 87  Q
    ||||||||||||  ||||||||||||||||||||||||||    
T  40840165 acttttgttgacaaaaatttctcttataaataggaccgga 40840126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 46877666 - 46877713
Alignment:
Q  40 atacattcacttttgttgacctaaatttctcttataaataggaccgga 87  Q
    ||||||| ||||||||||||| || ||||||||||| |||||||||||    
T  46877666 atacattaacttttgttgacccaactttctcttatatataggaccgga 46877713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 94364 - 94318
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| ||||||||||||||||| |||||| ||||    
T  94364 acttttgttgacccaaaattctcttataaataggatcggagggagta 94318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 31319445 - 31319399
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| ||||||||||||||| |||||||| ||||    
T  31319445 acttttgttgacccaaaattctcttataaatagaaccggagggagta 31319399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 98
Target Start/End: Original strand, 7107750 - 7107783
Alignment:
Q  65 tttctcttataaataggaccggaggtagtatttg 98  Q
    |||||||| |||||||||||||||||||||||||    
T  7107750 tttctcttgtaaataggaccggaggtagtatttg 7107783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 94
Target Start/End: Original strand, 9575495 - 9575539
Alignment:
Q  50 ttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||| || ||||||||||||||||||||| ||| ||||    
T  9575495 ttttgttgaccaaactttctcttataaataggaccgaagggagta 9575539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 84
Target Start/End: Complemental strand, 36016242 - 36016206
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggacc 84  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  36016242 acttttgttgacccaaaattctcttataaataggacc 36016206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 93; Significance: 3e-45; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 44785433 - 44785529
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 97  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44785433 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 44785529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 4238687 - 4238592
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4238687 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 4238592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 22722024 - 22721929
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22722024 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 22721929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 19557089 - 19557183
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19557089 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 19557183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 49823418 - 49823512
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49823418 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 49823512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 10298072 - 10297979
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10298072 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 10297979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 8817423 - 8817519
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 97  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  8817423 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggtagtattt 8817519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 8437518 - 8437423
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  8437518 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttattgacctaaatttctcttataaataggaccggaggtagtatt 8437423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 21295363 - 21295458
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21295363 caacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 21295458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 34080067 - 34080162
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34080067 caacaaaagttgatgtatcttgttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 34080162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 38964485 - 38964390
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  38964485 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggaggtagtatt 38964390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 9111531 - 9111628
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatttg 98  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  9111531 caacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggtagtatttg 9111628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 17653805 - 17653712
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  17653805 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 17653712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 37509014 - 37508921
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  37509014 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 37508921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 48340490 - 48340397
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  48340490 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttgtaaataggaccggaggtagta 48340397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 4 - 96
Target Start/End: Original strand, 2787872 - 2787964
Alignment:
Q  4 caaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  2787872 caaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagatagtatt 2787964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 40691033 - 40691128
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  40691033 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttaacctaaatttctcttataaataggaccggagttagtatt 40691128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 42507392 - 42507487
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  42507392 caacaaaagttgatgtatctagttcaaaattcagtccaaatacattcacttttgttgacctaaatttctattataaataggaccggaggtagtatt 42507487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 36095717 - 36095811
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  36095717 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttatcttataaataggaccggagggagtat 36095811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 46208123 - 46208029
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  46208123 caacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 46208029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 51406766 - 51406673
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  51406766 caacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 51406673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 42170383 - 42170478
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    |||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  42170383 caacaaaagttgatgtatctggttaaaaattcactccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtatt 42170478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 35513562 - 35513473
Alignment:
Q  5 aaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  35513562 aaaaggtgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgaagggagta 35513473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 33942969 - 33943055
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgga 87  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||| ||||    
T  33942969 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattaacttttgttgacctaactttcttttataaataggatcgga 33943055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 6013373 - 6013461
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 89  Q
    ||||||||||  || ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  6013373 caacaaaagtaaatttatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaattggactggagg 6013461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 9213609 - 9213513
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 97  Q
    |||||||| ||||||||||| |||| ||| | |||||| ||||||  ||||||||||||  |||| ||| ||||||||||||||||||| |||||||    
T  9213609 caacaaaaattgatgtatttggttataaaattagtccagatacatcaacttttgttgactaaaatgtcttttataaataggaccggagggagtattt 9213513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 48 - 97
Target Start/End: Original strand, 17653796 - 17653845
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtattt 97  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  17653796 acttttgttgacccaaaattctcttataaataggaccggaggtagtattt 17653845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 43323145 - 43323072
Alignment:
Q  9 gttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagga 82  Q
    |||||||||||| |||||||||| | |||||||||||  ||||||||||||| || ||| ||||||||||||||    
T  43323145 gttgatgtatttggttaaaaatttaatccaaatacatcaacttttgttgacccaattttttcttataaatagga 43323072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 4238678 - 4238725
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  4238678 acttttgttgaccaaaaattctcttataaataggaccggaggtagtat 4238725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 37509005 - 37509052
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  37509005 acttttgttgacccaaaattctcttataaataggaccggaggtagtat 37509052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 46208114 - 46208161
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||    
T  46208114 acttttgttgacctaaaattctcttataaataggaccggagggagtat 46208161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 8951943 - 8952009
Alignment:
Q  11 tgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaa 77  Q
    |||||||||| ||||||||||||||||||||||||| |||||||| ||   || |||||||||||||    
T  8951943 tgatgtattttgttaaaaattcagtccaaatacattaacttttgtcgattcaactttctcttataaa 8952009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 21295372 - 21295326
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||    
T  21295372 acttttgttgacctaaaattctcttataaataggaccggagggagta 21295326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 97
Target Start/End: Original strand, 10298063 - 10298112
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtattt 97  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  10298063 acttttgttgacccaaaattctcttataaataggaccggagggagtattt 10298112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 33128261 - 33128212
Alignment:
Q  39 aatacattcacttttgttgacctaaatttctcttataaataggaccggag 88  Q
    |||||||| ||||||||||||||||||||||||||||| |||||| ||||    
T  33128261 aatacattaacttttgttgacctaaatttctcttataattaggactggag 33128212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 40691042 - 40690993
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtattt 97  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  40691042 acttttgttgacccaaaattctcttataaataggaccggagggagtattt 40690993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 5323300 - 5323205
Alignment:
Q  1 caacaaaagttgatgtatttagtt-aaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    |||||||||||||||||||| ||| ||||||||| | ||||||||||   ||||||||||  || ||||| || ||||||||||||| || |||||    
T  5323300 caacaaaagttgatgtatttggttaaaaaattcaattcaaatacattattttttgttgactcaattttcttttgtaaataggaccggggggagtat 5323205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 29285797 - 29285873
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 79  Q
    ||||||||||| |||||| ||||| |||||| ||  || |||  ||||||||||||||||||||||| |||||||||||    
T  29285797 caacaaaagtttatgtatgtagttcaaaatttagatcagata--ttcacttttgttgacctaaatttatcttataaata 29285873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 49823427 - 49823380
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  49823427 acttttgttgacccaaaattctcttataaataggaccggagggagtat 49823380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 6013382 - 6013336
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  6013382 acttttgttgacccaaaattctcttataaataggaccggagggagta 6013336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 8092681 - 8092595
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgga 87  Q
    ||||| |||||||||||| | |||||||||| |||| | ||||||  ||||| |||||   || |||||||||||||||||||||||    
T  8092681 caacagaagttgatgtatctggttaaaaatttagtcgagatacatcaactttagttgattcaattttctcttataaataggaccgga 8092595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 94
Target Start/End: Original strand, 9213588 - 9213646
Alignment:
Q  36 ccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||  | |||||||||||||||||||||| ||||||||||| ||||| ||||    
T  9213588 ccaaatacatcaatttttgttgacctaaatttctctaataaataggacgggagggagta 9213646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 19557098 - 19557052
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  19557098 acttttgttgacccaaaattctcttataaataggaccggagggagta 19557052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 34080076 - 34080030
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  34080076 acttttgttgacccaaaattctcttataaataggaccggagggagta 34080030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 38964476 - 38964522
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  38964476 acttttgttgaccaaaaattctcttataaataggaccggagggagta 38964522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 48340481 - 48340527
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  48340481 acttttgttgacccaaaattctcttataaataggaccggagggagta 48340527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 9027188 - 9027139
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtattt 97  Q
    ||||||||||||| || ||| ||||||||||||||||||||| |||||||    
T  9027188 acttttgttgacccaactttatcttataaataggaccggagggagtattt 9027139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 9111540 - 9111499
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggagg 89  Q
    ||||||||||||| ||| ||||||||||||||||||||||||    
T  9111540 acttttgttgacccaaaattctcttataaataggaccggagg 9111499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 42507401 - 42507360
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggagg 89  Q
    ||||||||||||| ||| ||||||||||||||||||||||||    
T  42507401 acttttgttgacccaaaattctcttataaataggaccggagg 42507360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 51406759 - 51406804
Alignment:
Q  50 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||    
T  51406759 ttttgttgacccaaaattctcttataaataggaccggagggagtat 51406804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 8817432 - 8817384
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    ||||||||||||| ||| |||||||||||||||||||||| | ||||||    
T  8817432 acttttgttgacccaaaattctcttataaataggaccggaaggagtatt 8817384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 8437509 - 8437556
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    ||||||||||||  ||| |||||||||||||||||||||||| |||||    
T  8437509 acttttgttgactcaaaattctcttataaataggaccggagggagtat 8437556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 87
Target Start/End: Original strand, 22722015 - 22722054
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccgga 87  Q
    ||||||||||||| ||| ||||||||||||||||||||||    
T  22722015 acttttgttgacccaaaattctcttataaataggaccgga 22722054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 84
Target Start/End: Original strand, 26001141 - 26001184
Alignment:
Q  41 tacattcacttttgttgacctaaatttctcttataaataggacc 84  Q
    |||||| |||||||||||| ||||||||||||||||||| ||||    
T  26001141 tacattaacttttgttgacttaaatttctcttataaatatgacc 26001184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 2787878 - 2787832
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||| ||||| ||| |||||||||||||||||||||||| ||||    
T  2787878 acttttgctgacccaaaattctcttataaataggaccggagggagta 2787832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 44785442 - 44785396
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| ||||||||||||||| |||||||| ||||    
T  44785442 acttttgttgacccaaaattctcttataaatagaaccggaggaagta 44785396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 2131734 - 2131802
Alignment:
Q  26 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||| || ||| ||||||  ||||||||||||| |||| ||||| |||| |||||||||||| ||||    
T  2131734 aaaatttagaccagatacatcaacttttgttgacccaaatgtctctcataagtaggaccggagggagta 2131802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 26019517 - 26019612
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 97  Q
    |||| |||||| |||||| | ||| |||||| |||| | ||||||| ||||| ||| ||| || |||||||||||||||| || ||||| |||||||    
T  26019517 caaccaaagtttatgtatctggttcaaaatttagtcaagatacattaacttt-gttaacccaactttctcttataaatagaactggaggaagtattt 26019612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 84
Target Start/End: Complemental strand, 42170392 - 42170356
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggacc 84  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  42170392 acttttgttgacccaaaattctcttataaataggacc 42170356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 45652123 - 45652067
Alignment:
Q  40 atacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    |||||| || ||||||||||  |||| ||||||||||||||||| ||||| ||||||    
T  45652123 atacatccatttttgttgactcaaatgtctcttataaataggactggagggagtatt 45652067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 93; Significance: 3e-45; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 41478676 - 41478772
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 97  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41478676 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 41478772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 37990050 - 37990145
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37990050 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 37990145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 3055651 - 3055557
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3055651 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 3055557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 15896935 - 15896841
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15896935 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 15896841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 44397640 - 44397546
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44397640 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 44397546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 44398779 - 44398685
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44398779 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 44398685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 13197747 - 13197840
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13197747 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 13197840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 4683971 - 4684063
Alignment:
Q  3 acaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4683971 acaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 4684063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 13344577 - 13344481
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 97  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  13344577 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaatagaaccggaggtagtattt 13344481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 16243820 - 16243914
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  16243820 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaataggaccggagatagtat 16243914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 38917559 - 38917653
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  38917559 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttattgacctaaatttatcttataaataggaccggaggtagtat 38917653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 6648556 - 6648649
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  6648556 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttataaataggaccggaggtagta 6648649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 16044354 - 16044447
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16044354 caactaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 16044447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 37666647 - 37666740
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37666647 caactaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 37666740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 15372319 - 15372224
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  15372319 caacaaaagttgatgtatctcgttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggactggagggagtatt 15372224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 9047792 - 9047886
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||    
T  9047792 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactttttttgacctaaatttctcttataaatatgaccggagatagtat 9047886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 12337974 - 12338067
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| |||||||||||||    
T  12337974 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttttcttataaatagaaccggaggtagta 12338067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 30099219 - 30099310
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtag 92  Q
    |||||||||||||||||| || ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  30099219 caacaaaagttgatgtatctaattaaaaattcaatccaaatacattcatttttgttgacctaaatttctcttataaataggatcggaggtag 30099310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 41492933 - 41493015
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggac 83  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  41492933 caacaaaagttgatgtatctagttaaaaattctgtccaaatacattcacttttgttgacctaaatttcttttataaataggac 41493015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 12170436 - 12170529
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||| ||||||||| |||||| ||||    
T  12170436 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattaacttttattgacctaattttctcttgtaaataggatcggagggagta 12170529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 44804616 - 44804680
Alignment:
Q  2 aacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatt 66  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||    
T  44804616 aacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatt 44804680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 16734875 - 16734802
Alignment:
Q  2 aacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 75  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||| || |||||||||||    
T  16734875 aacaaaagttgatgtatttggttaaaaattcagtccagatacatcaacttttgttgaccaaactttctcttata 16734802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 41453149 - 41453090
Alignment:
Q  4 caaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaa 63  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||    
T  41453149 caaaagttgatgtattttgttaaaaattcagtccaaatacattaacttttattgacctaa 41453090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 31150733 - 31150659
Alignment:
Q  14 tgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 88  Q
    ||||| |||||||||||| |||||||||||||  ||||||||||||  || |||||||||||||||||| |||||    
T  31150733 tgtatctagttaaaaatttagtccaaatacataaacttttgttgacgcaactttctcttataaataggatcggag 31150659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 41492942 - 41492894
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  41492942 acttttgttgacccaaatttctcttataaataggaccggagggagtatt 41492894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 48 - 98
Target Start/End: Original strand, 3055642 - 3055692
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtatttg 98  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||||    
T  3055642 acttttgttgacccaaaattctcttataaataggaccggagggagtatttg 3055692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 13724139 - 13724236
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatttg 98  Q
    |||||||||||||||||||| |||||||| |  | ||| ||||||  |||||||||||||  ||| || |||||||||||||| | ||| ||||||||    
T  13724139 caacaaaagttgatgtatttggttaaaaaattggaccagatacatcaacttttgttgaccagaatatcgcttataaataggactgtagggagtatttg 13724236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 37990059 - 37990010
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtattt 97  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  37990059 acttttgttgacccaaaattctcttataaataggaccggagggagtattt 37990010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 6648565 - 6648517
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  6648565 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 6648517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 9047801 - 9047753
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  9047801 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 9047753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 41478685 - 41478637
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  41478685 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 41478637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 36688975 - 36688892
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggacc 84  Q
    |||||||| ||||||||| | ||| ||||||||| | | ||||||  || |||||||||| || ||||||||||||||||||||    
T  36688975 caacaaaaattgatgtatcttgtttaaaattcagacaagatacatcaacgtttgttgaccaaactttctcttataaataggacc 36688892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 38917568 - 38917521
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  38917568 acttttgttgacccaaaattctcttataaataggaccggagggagtat 38917521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 44398770 - 44398817
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  44398770 acttttgttgacccaaaattctcttataaataggaccggagggagtat 44398817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 12337983 - 12337937
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  12337983 acttttgttgacccaaaattctcttataaataggaccggagggagta 12337937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 13197756 - 13197710
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  13197756 acttttgttgacccaaaattctcttataaataggaccggagggagta 13197710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 94
Target Start/End: Complemental strand, 13724160 - 13724102
Alignment:
Q  36 ccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||  ||||||||||||||| || |||||| |||||||||||||||| ||||    
T  13724160 ccaaatacatcaacttttgttgacctagatgtctcttgtaaataggaccggagggagta 13724102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 15372310 - 15372356
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  15372310 acttttgttgacccaaaattctcttataaataggaccggagggagta 15372356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 15896926 - 15896972
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  15896926 acttttgttgacccaaaattctcttataaataggaccggagggagta 15896972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 30852654 - 30852748
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    ||||||||||| |||||| |  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| |||||    
T  30852654 caacaaaagtttatgtatctgattcaatattcagtctagatacataaacttttattaatctaactttctcttataaataggaccggagggagtat 30852748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 4553069 - 4553125
Alignment:
Q  23 ttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 79  Q
    ||||||||||| |||||||||||  | ||||||||||| || |||||||||||||||    
T  4553069 ttaaaaattcaatccaaatacatctatttttgttgaccaaactttctcttataaata 4553125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 16243829 - 16243781
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    ||||||||||||| ||| |||||||||||||||||||||| | ||||||    
T  16243829 acttttgttgacccaaaattctcttataaataggaccggatggagtatt 16243781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 23227344 - 23227404
Alignment:
Q  36 ccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    ||||||||||  ||||||||||||| |||| ||||||||||||||||| | ||| ||||||    
T  23227344 ccaaatacatcaacttttgttgaccaaaatgtctcttataaataggactgaaggaagtatt 23227404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 37666656 - 37666608
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    ||||| ||||||| ||| |||||||||||||||||||||||| ||||||    
T  37666656 actttagttgacccaaaattctcttataaataggaccggagggagtatt 37666608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 13344568 - 13344615
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    ||||||||||| | ||| |||||||||||||||||||||||| |||||    
T  13344568 acttttgttgatccaaaattctcttataaataggaccggagggagtat 13344615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 30099228 - 30099181
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| |||||    
T  30099228 acttttgttgacccaaaattctctaataaataggaccggagggagtat 30099181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 44397631 - 44397678
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    ||||||||||||| ||| ||||||||||||||||||||| || |||||    
T  44397631 acttttgttgacccaaaattctcttataaataggaccggggggagtat 44397678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 16044363 - 16044317
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||| ||||||| ||| |||||||||||||||||||||||| ||||    
T  16044363 actttagttgacccaaaattctcttataaataggaccggagggagta 16044317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 44804624 - 44804583
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggagg 89  Q
    ||||||||| || |||| ||||||||||||||||||||||||    
T  44804624 acttttgttaacttaaaattctcttataaataggaccggagg 44804583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 10069283 - 10069339
Alignment:
Q  40 atacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    ||||||| |||||||||||||||||| | ||||| |||||| ||| |||| ||||||    
T  10069283 atacattaacttttgttgacctaaatatttcttaaaaatagtaccagaggaagtatt 10069339  T

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Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 16561042 - 16561126
Alignment:
Q  5 aaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 89  Q
    |||||||||||||||| ||| |||||| || ||||||| ||  |  |||||||| | || ||||||||||||||| || ||||||    
T  16561042 aaaagttgatgtattttgtttaaaatttagaccaaataaatcaatctttgttgatcaaactttctcttataaatatgatcggagg 16561126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 80
Target Start/End: Complemental strand, 36089489 - 36089457
Alignment:
Q  48 acttttgttgacctaaatttctcttataaatag 80  Q
    |||||||||||||||||| ||||||||||||||    
T  36089489 acttttgttgacctaaatatctcttataaatag 36089457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 45294416 - 45294333
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 85  Q
    ||||||||||| | |||||| |||||||| | ||||||| |||||| |||||||||||   |||| |||| | ||||||||||||    
T  45294416 caacaaaagttaaagtatttggttaaaaaattagtccaa-tacattaacttttgttgaatgaaatgtctcctgtaaataggaccg 45294333  T

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Target: scaffold0204 (Bit Score: 92; Significance: 1e-44; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 23878 - 23783
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23878 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 23783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 23869 - 23917
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    ||||||||||||| ||| || ||||||||||||||||||||| ||||||    
T  23869 acttttgttgacccaaaattttcttataaataggaccggagggagtatt 23917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 1e-44; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 54649 - 54744
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54649 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 54744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 2890199 - 2890294
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2890199 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 2890294  T

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Target: chr8; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 7785815 - 7785910
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7785815 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 7785910  T

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Target: chr8; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 43199391 - 43199485
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43199391 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 43199485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 3304315 - 3304408
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3304315 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 3304408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 6552748 - 6552655
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6552748 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 6552655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 12343177 - 12343270
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12343177 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 12343270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 4 - 96
Target Start/End: Original strand, 7805739 - 7805831
Alignment:
Q  4 caaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7805739 caaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 7805831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 12763691 - 12763785
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  12763691 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 12763785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 15888389 - 15888482
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15888389 caacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 15888482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 31654706 - 31654613
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  31654706 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 31654613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 32114512 - 32114605
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32114512 caacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 32114605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 39571240 - 39571333
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  39571240 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggaggtagta 39571333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 44498228 - 44498317
Alignment:
Q  5 aaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44498228 aaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 44498317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 33289298 - 33289393
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  33289298 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgatctaaatttctcttataaataggaccggaggtagtatt 33289393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 25601037 - 25601131
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  25601037 caacaaaagttaatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagtat 25601131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 32211400 - 32211494
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  32211400 caacaaaaattgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagtat 32211494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 7012264 - 7012171
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  7012264 caacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgatctaaatttctcttataaataggaccggaggtagta 7012171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 13578950 - 13578856
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||    
T  13578950 caacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttattgacctaaatttctcttataaatagaactggaggtagtat 13578856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 4245649 - 4245714
Alignment:
Q  32 cagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 97  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4245649 cagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 4245714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 8587259 - 8587170
Alignment:
Q  5 aaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||| |||||||||||| |||| ||||||||  ||||||||||||| || ||||||||||||||||||||||||| ||||    
T  8587259 aaaagttgatgtatctagttaaaaatttagtcaaaatacatcaacttttgttgaccaaactttctcttataaataggaccggagggagta 8587170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 28463699 - 28463614
Alignment:
Q  6 aaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggta 91  Q
    ||||||||| ||| | ||| ||||||||||||||||||||  ||||||||||||| || |||||||||||||||||||||||||||    
T  28463699 aaagttgatatatctggttcaaaattcagtccaaatacatcaacttttgttgacccaactttctcttataaataggaccggaggta 28463614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 24692016 - 24692112
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatttg 98  Q
    |||||||||||||| ||| | ||||||| |||||| || ||||||  |||||||||||||||| ||| |||||||||||||| || ||| ||||||||    
T  24692016 caacaaaagttgatatatctggttaaaa-ttcagttcagatacatcaacttttgttgacctaactttttcttataaataggatcgaagggagtatttg 24692112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 17007000 - 17006916
Alignment:
Q  5 aaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 89  Q
    |||||||||||||| |  |||| ||||||||||| || |||  ||||||||||||| || |||||||||||||||||| ||||||    
T  17007000 aaaagttgatgtatctgattaacaattcagtccagatccatcaacttttgttgacccaactttctcttataaataggatcggagg 17006916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 17570247 - 17570331
Alignment:
Q  5 aaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 89  Q
    |||||||||||||| |  |||| ||||||||||| || |||  ||||||||||||| || |||||||||||||||||| ||||||    
T  17570247 aaaagttgatgtatctgattaacaattcagtccagatccatcaacttttgttgacccaactttctcttataaataggatcggagg 17570331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 27422266 - 27422322
Alignment:
Q  40 atacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||| ||| ||||||    
T  27422266 atacattcatttttgttgacccaaatttctcttataaataggaccgaagggagtatt 27422322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 95
Target Start/End: Complemental strand, 25601054 - 25600999
Alignment:
Q  40 atacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    ||||||| ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  25601054 atacattaacttttgttgacccaaaattctcttataaataggaccggagggagtat 25600999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 48 - 98
Target Start/End: Complemental strand, 39571249 - 39571199
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtatttg 98  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||||    
T  39571249 acttttgttgacccaaaattctcttataaataggaccggagggagtatttg 39571199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 7785824 - 7785776
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  7785824 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 7785776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 54658 - 54611
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  54658 acttttgttgacccaaaattctcttataaataggaccggagggagtat 54611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 2890208 - 2890161
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  2890208 acttttgttgacccaaaattctcttataaataggaccggagggagtat 2890161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 97
Target Start/End: Complemental strand, 32211407 - 32211360
Alignment:
Q  50 ttttgttgacctaaatttctcttataaataggaccggaggtagtattt 97  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  32211407 ttttgttgacccaaaattctcttataaataggaccggagggagtattt 32211360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 99
Target Start/End: Complemental strand, 33289307 - 33289256
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtatttgg 99  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||| ||||    
T  33289307 acttttgttgacccaaaattctcttataaataggaccggagggagtacttgg 33289256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 43199400 - 43199353
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  43199400 acttttgttgaccaaaaattctcttataaataggaccggagggagtat 43199353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 6552739 - 6552785
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  6552739 acttttgttgacccaaaattctcttataaataggaccggagggagta 6552785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 102
Target Start/End: Original strand, 7012255 - 7012309
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtatttggttt 102  Q
    ||||||||||| | ||| |||||||||||||||||||||||| ||||||| ||||    
T  7012255 acttttgttgatccaaaattctcttataaataggaccggaggaagtattttgttt 7012309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 13246851 - 13246801
Alignment:
Q  37 caaatacattcacttttgttgacctaaatttctcttataaataggaccgga 87  Q
    |||||||||||| ||||||||| | ||||||||||||||||||||| ||||    
T  13246851 caaatacattcatttttgttgatccaaatttctcttataaataggatcgga 13246801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 12763700 - 12763651
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtattt 97  Q
    ||||||||||||| ||| || ||||||||||||||||||||| |||||||    
T  12763700 acttttgttgacccaaaattatcttataaataggaccggagggagtattt 12763651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 24203018 - 24203091
Alignment:
Q  9 gttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagga 82  Q
    |||||||||||| ||| |||||| |   |||||| || ||||||| ||||| ||||||||||||||||||||||    
T  24203018 gttgatgtatttggttcaaaatttaaatcaaatatatccacttttattgacataaatttctcttataaatagga 24203091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 7805745 - 7805697
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    ||||||| ||||| ||| |||||||||||||||||||||||| ||||||    
T  7805745 acttttgctgacccaaaattctcttataaataggaccggagggagtatt 7805697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 12343186 - 12343146
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggag 88  Q
    ||||||||||||| ||| |||||||||||||||||||||||    
T  12343186 acttttgttgaccaaaaattctcttataaataggaccggag 12343146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 44498233 - 44498185
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    |||||| |||||| ||| |||||||||||||||||||||||| ||||||    
T  44498233 acttttattgacccaaaattctcttataaataggaccggagggagtatt 44498185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 96
Target Start/End: Complemental strand, 6899452 - 6899417
Alignment:
Q  61 taaatttctcttataaataggaccggaggtagtatt 96  Q
    ||||||| ||||||||||||||||||||||||||||    
T  6899452 taaatttttcttataaataggaccggaggtagtatt 6899417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 97
Target Start/End: Complemental strand, 32114519 - 32114472
Alignment:
Q  50 ttttgttgacctaaatttctcttataaataggaccggaggtagtattt 97  Q
    ||||||||||| ||| || ||||||||||||||||||||| |||||||    
T  32114519 ttttgttgacccaaaattttcttataaataggaccggagggagtattt 32114472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 33057687 - 33057592
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    |||||||| ||||||||| | ||||||| |||| |||  |||||   | ||||||||| | || ||| ||||||||||||||||||||| ||||||    
T  33057687 caacaaaaattgatgtatctggttaaaatttcactccggatacaacaatttttgttgatccaactttgtcttataaataggaccggagggagtatt 33057592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 3304324 - 3304278
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| || ||||||||||||||||||||| ||||    
T  3304324 acttttgttgacccaaaattttcttataaataggaccggagggagta 3304278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 28999089 - 28999163
Alignment:
Q  5 aaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 79  Q
    ||||||| | |||| ||||||||||||||||| | ||||||  | ||||||||||| || ||||| |||||||||    
T  28999089 aaaagtttacgtatgtagttaaaaattcagtctagatacatcaatttttgttgaccaaactttcttttataaata 28999163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 31654697 - 31654743
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  31654697 acttttgttgacccaaaattcttttataaataggaccggaggaagta 31654743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 15888398 - 15888349
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtattt 97  Q
    ||||||||||||| ||| ||||||||||||||| || ||||| |||||||    
T  15888398 acttttgttgacccaaaattctcttataaatagaactggagggagtattt 15888349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 92; Significance: 1e-44; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 8383006 - 8383101
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8383006 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 8383101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 2830428 - 2830334
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2830428 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 2830334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 11572182 - 11572276
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11572182 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 11572276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 6330208 - 6330115
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6330208 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 6330115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 26602416 - 26602323
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26602416 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 26602323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 13853630 - 13853725
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  13853630 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggtagtatt 13853725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 33052835 - 33052926
Alignment:
Q  5 aaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33052835 aaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 33052926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 8099623 - 8099529
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8099623 caacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 8099529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 6143647 - 6143553
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  6143647 caacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagtat 6143553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 35031038 - 35031132
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  35031038 caacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaataggaccggaggtagtat 35031132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 9644789 - 9644696
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  9644789 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttataaataggaccggaggtagta 9644696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 9650806 - 9650713
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  9650806 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttataaataggaccggaggtagta 9650713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 6068659 - 6068564
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  6068659 caacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttattgacctaaatttttcttataaataggaccggaggtagtatt 6068564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 8417830 - 8417925
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||    
T  8417830 caacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataagaccagagggagtatt 8417925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 13043850 - 13043758
Alignment:
Q  2 aacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||||||| |||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  13043850 aacaaaagttgatgtatctagttaaaaattcaattcaaatacattcatttttgttgacctaaatttctcttataaatagaaccggaggtagta 13043758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 28747171 - 28747248
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 78  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  28747171 caacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaat 28747248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 6068977 - 6069062
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgg 86  Q
    ||||||||| ||| ||||  ||||||||||| || ||||||||||| |||||||||||||||||| ||| ||||||||||||||||    
T  6068977 caacaaaagatgaagtatcgagttaaaaatttagaccaaatacattaacttttgttgacctaaatatcttttataaataggaccgg 6069062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 22896555 - 22896471
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| ||||||||||||||||||||||||         |||||||||||| |||||||||||||||||||||||| ||||    
T  22896555 caacaaaagttgatgtatctagttaaaaattcagtccaaatac---------tgttgacctaaacttctcttataaataggaccggagggagta 22896471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 17992081 - 17992018
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaa 64  Q
    |||||||| | ||||||| |||||||||||||| ||||||||||||||||||| ||||||||||    
T  17992081 caacaaaaatcgatgtatctagttaaaaattcaatccaaatacattcacttttattgacctaaa 17992018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 3788130 - 3788034
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttg-ttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    |||||||||||||||||||||||||| ||||||||||| || ||   | ||||| |||||| || |||||||||||||||||| || ||| ||||||    
T  3788130 caacaaaagttgatgtatttagttaacaattcagtccacatccaacaaattttgattgacccaactttctcttataaataggatcgtagggagtatt 3788034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 14936494 - 14936582
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 89  Q
    ||||||||| |||||||| ||||||| ||||   |||||||||||  ||| ||||||||| |||| |||||||||||||||||| ||||    
T  14936494 caacaaaaggtgatgtatctagttaagaatttgttccaaatacatcaactattgttgacccaaatatctcttataaataggaccagagg 14936582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 7597018 - 7597092
Alignment:
Q  5 aaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 79  Q
    ||||||||||||||||||||||||||||||| |  ||||||  ||||||||| ||  || |||||||||||||||    
T  7597018 aaaagttgatgtatttagttaaaaattcagttcggatacatcaacttttgttaacacaactttctcttataaata 7597092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 95
Target Start/End: Original strand, 3788111 - 3788168
Alignment:
Q  38 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    ||||||||  |||||||||||||||||||| ||||||||||| ||||||||| |||||    
T  3788111 aaatacatcaacttttgttgacctaaatttatcttataaataagaccggagggagtat 3788168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 97
Target Start/End: Original strand, 8099614 - 8099663
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtattt 97  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  8099614 acttttgttgacccaaaattctcttataaataggaccggagggagtattt 8099663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 97
Target Start/End: Original strand, 9644780 - 9644829
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtattt 97  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  9644780 acttttgttgacccaaaattctcttataaataggaccggagggagtattt 9644829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 97
Target Start/End: Original strand, 9650797 - 9650846
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtattt 97  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  9650797 acttttgttgacccaaaattctcttataaataggaccggagggagtattt 9650846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 26602407 - 26602455
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  26602407 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 26602455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 6330199 - 6330246
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  6330199 acttttgttgacccaaaattctcttataaataggaccggagggagtat 6330246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 11572191 - 11572144
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  11572191 acttttgttgacccaaaattctcttataaataggaccggagggagtat 11572144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 13853639 - 13853592
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  13853639 acttttgttgacccaaaattctcttataaataggaccggagggagtat 13853592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 2830419 - 2830465
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  2830419 acttttgttgacccaaaattctcttataaataggaccggagggagta 2830465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 75
Target Start/End: Complemental strand, 6549940 - 6549902
Alignment:
Q  37 caaatacattcacttttgttgacctaaatttctcttata 75  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  6549940 caaatacattaacttttgttgacctaaatttctcttata 6549902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 8383015 - 8382969
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  8383015 acttttgttgacccaaaattctcttataaataggaccggagggagta 8382969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 35031045 - 35031000
Alignment:
Q  50 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||    
T  35031045 ttttgttgacccaaaattctcttataaataggaccggaggaagtat 35031000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 6068650 - 6068697
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    ||||||||||||  ||| |||||||||||||||||||||||| |||||    
T  6068650 acttttgttgactcaaaattctcttataaataggaccggagggagtat 6068697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 8417839 - 8417793
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||| ||| ||||    
T  8417839 acttttgttgacccaaaattctcttataaataggaccgaagggagta 8417793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 98
Target Start/End: Complemental strand, 33052840 - 33052790
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtatttg 98  Q
    |||||| |||||| ||| |||||||||||||||||||||| | ||||||||    
T  33052840 acttttattgacccaaaattctcttataaataggaccggatggagtatttg 33052790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 83
Target Start/End: Complemental strand, 12473684 - 12473651
Alignment:
Q  50 ttttgttgacctaaatttctcttataaataggac 83  Q
    |||| |||||||||||||||||||||||||||||    
T  12473684 ttttattgacctaaatttctcttataaataggac 12473651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 94
Target Start/End: Original strand, 17992074 - 17992118
Alignment:
Q  50 ttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||| ||| |||||||||||||||||||| ||| ||||    
T  17992074 ttttgttgacccaaaattctcttataaataggaccgaagggagta 17992118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 99
Target Start/End: Complemental strand, 22880944 - 22880912
Alignment:
Q  67 tctcttataaataggaccggaggtagtatttgg 99  Q
    |||||| ||||||||||||||||||||||||||    
T  22880944 tctcttgtaaataggaccggaggtagtatttgg 22880912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 99
Target Start/End: Complemental strand, 22898879 - 22898847
Alignment:
Q  67 tctcttataaataggaccggaggtagtatttgg 99  Q
    |||||| ||||||||||||||||||||||||||    
T  22898879 tctcttgtaaataggaccggaggtagtatttgg 22898847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 92; Significance: 1e-44; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 37148992 - 37149087
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37148992 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 37149087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 9395443 - 9395350
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9395443 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 9395350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 36563575 - 36563671
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 97  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  36563575 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagtattt 36563671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 583082 - 582987
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  583082 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgacctaaatttctcttataaataggaccggaggtagtatt 582987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 23360035 - 23359941
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  23360035 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccagaggtagtat 23359941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 41989444 - 41989538
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  41989444 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaataggaccggaggtagtat 41989538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 11795261 - 11795168
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  11795261 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagta 11795168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 20848167 - 20848072
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  20848167 caacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttattgacctaaatttctcttataaataggaccggaggtagtatt 20848072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 13033144 - 13033050
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  13033144 caacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggaagtat 13033050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 13103117 - 13103023
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  13103117 caacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggaagtat 13103023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 17025717 - 17025621
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 97  Q
    |||||||||||||||||| ||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  17025717 caacaaaagttgatgtatctagttaaaaattcagtttaaatacattcacttttgtggacctaaatttctcttataaataggaccggaggtagtattt 17025621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 26350391 - 26350480
Alignment:
Q  5 aaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  26350391 aaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggagggagta 26350480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 4444053 - 4443957
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 97  Q
    |||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  4444053 caacaaaagttgatgtatctatttaaaaattcagtctaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggaagtattt 4443957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 37642043 - 37641951
Alignment:
Q  5 aaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttg-ttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  37642043 aaaagttgatgtatctagttaaaaattcagtccacatacattcactttttattgacctaaatttctcttataaataggaccggaggtagtatt 37641951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 21576039 - 21575970
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 70  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21576039 caacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 21575970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 6126917 - 6126845
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctctta 73  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||| ||||||||||||||    
T  6126917 caacaaaagttgatgtatctagttaaaaatttagtccaaatacattcatttttgttgatctaaatttctctta 6126845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 38361750 - 38361822
Alignment:
Q  23 ttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||| |||||    
T  38361750 ttaaaaattcagtccaaatacattcacttttattgacctaaatttatcttataaataggatcggaggaagtat 38361822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 13539909 - 13539986
Alignment:
Q  6 aaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgga 87  Q
    ||||||||||||| ||||||||||||||||| ||||  |||    |||||||||||||||||||||||||||||||||||||    
T  13539909 aaagttgatgtatctagttaaaaattcagtctaaatttatt----tttgttgacctaaatttctcttataaataggaccgga 13539986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 2629585 - 2629675
Alignment:
Q  5 aaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    |||| ||||||||| |||||||||| | ||  || ||||||| |||||||||||||||||| | ||||||||| | ||||||||| |||||    
T  2629585 aaaatttgatgtatatagttaaaaaattagatcagatacattaacttttgttgacctaaatatttcttataaacaagaccggaggaagtat 2629675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 3549585 - 3549663
Alignment:
Q  2 aacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatag 80  Q
    ||||||||||||||||||  |||||||||| || ||| ||||||| | ||||||||||  |||| ||||||||||||||    
T  3549585 aacaaaagttgatgtattcggttaaaaatttagaccagatacattaatttttgttgactaaaatatctcttataaatag 3549663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 23360026 - 23360072
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  23360026 acttttgttgacccaaaattctcttataaataggaccggaggtagta 23360072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 39290867 - 39290775
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||| |||||| || ||||||||| | |||||||||||  | |||||||||||| |  ||||||||| |||||||||||||| ||||    
T  39290867 caacaaaagttaatgtatctaattaaaaatttaatccaaatacatcaatttttgttgacctgatattctcttat-aataggaccggagggagta 39290775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 41989453 - 41989404
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtattt 97  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  41989453 acttttgttgacccaaaattctcttataaataggaccggagggagtattt 41989404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 9395434 - 9395482
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  9395434 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 9395482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 13103108 - 13103156
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  13103108 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 13103156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 17025708 - 17025755
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  17025708 acttttgttgacccaaaattctcttataaataggaccggagggagtat 17025755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 36563584 - 36563537
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  36563584 acttttgttgacccaaaattctcttataaataggaccggagggagtat 36563537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 6126908 - 6126954
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  6126908 acttttgttgacccaaaattctcttataaataggaccggagggagta 6126954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 88
Target Start/End: Original strand, 11574166 - 11574204
Alignment:
Q  50 ttttgttgacctaaatttctcttataaataggaccggag 88  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  11574166 ttttgttgacctaaatgtctcttataaataggaccggag 11574204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 966224 - 966273
Alignment:
Q  40 atacattcacttttgttgacctaaatttctcttataaataggaccggagg 89  Q
    ||||||||| ||||||||| | |||||||||||||||||||||| |||||    
T  966224 atacattcatttttgttgatccaaatttctcttataaataggactggagg 966273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 35904490 - 35904448
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacat 45  Q
    ||||||||||  |||||||||||||||||||||||||||||||||    
T  35904490 caacaaaagt--atgtatttagttaaaaattcagtccaaatacat 35904448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 13033135 - 13033183
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    ||||||||||||| ||| ||||||||||||||||| |||||| ||||||    
T  13033135 acttttgttgacccaaaattctcttataaataggatcggagggagtatt 13033183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 11795252 - 11795299
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    ||||||||||||| ||| |||||||||||||||||| ||||| |||||    
T  11795252 acttttgttgacccaaaattctcttataaataggactggagggagtat 11795299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 21576030 - 21576077
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    ||||||||||| | ||| |||||||||||||||||||||||| |||||    
T  21576030 acttttgttgatccaaaattctcttataaataggaccggagggagtat 21576077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 37642038 - 37642085
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    |||||| |||||| ||| |||||||||||||||||||||||| |||||    
T  37642038 acttttattgacccaaaattctcttataaataggaccggagggagtat 37642085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 40138831 - 40138906
Alignment:
Q  5 aaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgac-ctaaatttctcttataaata 79  Q
    ||||||||||||||||  ||||||||||||| |||||| ||| | |||||||||| | |  |||||||||||||||    
T  40138831 aaaagttgatgtatttgattaaaaattcagttcaaatatatttatttttgttgactcaacttttctcttataaata 40138906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 27080981 - 27081063
Alignment:
Q  5 aaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgga 87  Q
    ||||| |||| |||||  ||||||||| ||   ||||||||  |||||||||||||||||| |||||| ||||||||| ||||    
T  27080981 aaaagatgatttatttgattaaaaatttagattaaatacatcaacttttgttgacctaaatgtctcttgtaaataggatcgga 27081063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 37149001 - 37148955
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  37149001 acttttgttgacccaaaattctattataaataggaccggagggagta 37148955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 39030590 - 39030648
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgac 59  Q
    ||||||||||| |||||||| ||||||||||    ||||||||||| ||||||||||||    
T  39030590 caacaaaagttaatgtatttggttaaaaatttgtaccaaatacattaacttttgttgac 39030648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 2366375 - 2366444
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 70  Q
    |||||| |||| |||||||| ||||||| ||||||||||||||||  |||||| || ||| || ||||||    
T  2366375 caacaagagttcatgtatttggttaaaatttcagtccaaatacatcaacttttattaaccaaactttctc 2366444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 3549602 - 3549553
Alignment:
Q  39 aatacattcacttttgttgacctaaatttctcttataaataggaccggag 88  Q
    |||||||  ||||||||| |  ||||||||||||||||||||||||||||    
T  3549602 aatacatcaacttttgttaatataaatttctcttataaataggaccggag 3549553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 4444044 - 4444085
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggagg 89  Q
    ||||||||||| ||||| |||||||||||||| |||||||||    
T  4444044 acttttgttgatctaaaattctcttataaataagaccggagg 4444085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 80
Target Start/End: Complemental strand, 2366396 - 2366352
Alignment:
Q  36 ccaaatacattcacttttgttgacctaaatttctcttataaatag 80  Q
    ||||||||||  ||| ||||||||| |||||||||||||||||||    
T  2366396 ccaaatacatgaactcttgttgacccaaatttctcttataaatag 2366352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Complemental strand, 36595818 - 36595782
Alignment:
Q  50 ttttgttgacctaaatttctcttataaataggaccgg 86  Q
    |||||||||||||| ||||||||||||||| ||||||    
T  36595818 ttttgttgacctaactttctcttataaataagaccgg 36595782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 92; Significance: 1e-44; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 3372214 - 3372119
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3372214 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 3372119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 47833704 - 47833609
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47833704 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 47833609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 48336356 - 48336261
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48336356 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 48336261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 3993069 - 3992974
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3993069 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccgaaatttctcttataaataggaccggaggtagtatt 3992974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 42797825 - 42797730
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  42797825 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttatatataggaccggaggtagtatt 42797730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 3904720 - 3904814
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  3904720 caacaaaaattgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttcttttataaataggaccggaggtagtat 3904814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 6121930 - 6122023
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  6121930 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggaggtagta 6122023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 20538723 - 20538816
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20538723 caacaaaatttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 20538816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 24704463 - 24704370
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24704463 caacaaaagttaatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 24704370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 53337459 - 53337370
Alignment:
Q  5 aaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53337459 aaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 53337370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 33551292 - 33551200
Alignment:
Q  3 acaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33551292 acaaaagttgatgtatctagttaaaaattcagtcaaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 33551200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 43900641 - 43900546
Alignment:
Q  2 aacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 97  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  43900641 aacaaaagttgatgtatctagttaaaaattcagtccaaatacatttacttttgttgacctaaatttctcttataaataggaccggagggagtattt 43900546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 7579403 - 7579309
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7579403 caacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttaacctaaatttctcttataaataggaccggaggtagtat 7579309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 47838654 - 47838748
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  47838654 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccgaaatttctcttataaataggatcggaggtagtat 47838748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 5986969 - 5986876
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||    
T  5986969 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctatatttctcttataaatagaatcggaggtagta 5986876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 46797818 - 46797725
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  46797818 caacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagaaccggaggtagta 46797725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 52756768 - 52756675
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  52756768 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgacctaaatttctcttataaataggaccggagatagta 52756675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 26231668 - 26231576
Alignment:
Q  3 acaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    |||||||||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  26231668 acaaaagttgatatatctagttaaaaattcagtccaaatacattcgcttttgttgacctaaatttctcttataaataggaccggaggtagtat 26231576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 51894619 - 51894714
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    |||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  51894619 caacaaaagttgatgtatctggttaaaaattcagtccaaaaacattcacttttgttgacctaaatttttcttataaataggaccggaggtagtatt 51894714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 33621889 - 33621795
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||    
T  33621889 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagaaccgaaagtagtat 33621795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 41469803 - 41469899
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 97  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||    
T  41469803 caacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttcttttataaataggaccgaaggaagtattt 41469899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 40913226 - 40913320
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    |||||||||||||| |||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  40913226 caacaaaagttgatatatccagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggagggagtat 40913320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 41615713 - 41615794
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagga 82  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  41615713 caacaaaagttgatgtatttagttaaaaattaagtccaaatacattaacttttgttgacctaattttctcttataaatagga 41615794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 3422153 - 3422073
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagga 82  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  3422153 caacaaaagttgatgtatctagttaaaaattcagttcaaatacattca-ttttgttgacctaaatttctcttataaatagga 3422073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 25855174 - 25855082
Alignment:
Q  3 acaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    |||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||  || ||||||| |||||||||||| |||| |||||    
T  25855174 acaaaagtcgatgtatttggttaaaaattcagtccaaatacattaacttttgttgactcaactttctctcataaataggacctgagggagtat 25855082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 29845738 - 29845656
Alignment:
Q  1 caacaaaagtt-gatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggac 83  Q
    ||||||||||| |||||||| ||||||||||||||| |||||| ||| | ||||||||||||||||||||||||||| ||||||    
T  29845738 caacaaaagtttgatgtatt-agttaaaaattcagttcaaatatattaatttttgttgacctaaatttctcttataagtaggac 29845656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 94
Target Start/End: Original strand, 4780371 - 4780425
Alignment:
Q  40 atacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||    
T  4780371 atacattaacttttgttgaccaaaatttctcttataaataggaccggagggagta 4780425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 50430455 - 50430533
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 79  Q
    |||||||| ||||||||| | |||||||||||| |||||||||||  ||||||||||||| || || ||||||||||||    
T  50430455 caacaaaaattgatgtatctggttaaaaattcaatccaaatacatcaacttttgttgacccaacttgctcttataaata 50430533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 17236839 - 17236912
Alignment:
Q  16 tatttagttaaaaattcagtccaaa-tacattcacttttgttgacctaaatttctcttataaataggaccggag 88  Q
    ||||| ||||||||||||||| ||| |||||  ||||||||||||| |||||| ||||||||||||||||||||    
T  17236839 tatttggttaaaaattcagtctaaaatacatcaacttttgttgacccaaatttttcttataaataggaccggag 17236912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 17344306 - 17344219
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 88  Q
    ||||||||||||||||||    ||||||||||||| || ||||||  |||||||||||  ||| |||||||||||||||| |||||||    
T  17344306 caacaaaagttgatgtatccgattaaaaattcagttcagatacatcaacttttgttgatttaactttctcttataaatagaaccggag 17344219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 42797816 - 42797862
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||    
T  42797816 acttttgttgacctaaaattctcttataaataggaccggagggagta 42797862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 3422144 - 3422192
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  3422144 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 3422192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 41469812 - 41469764
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  41469812 acttttgttgaccaaaaattctcttataaataggaccggagggagtatt 41469764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 47838663 - 47838615
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  47838663 acttttgttgaccaaaaattctcttataaataggaccggagggagtatt 47838615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 95
Target Start/End: Original strand, 24704446 - 24704501
Alignment:
Q  40 atacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    ||||||| ||||||||||||| ||| ||||||||||||||||| |||||| |||||    
T  24704446 atacattaacttttgttgacccaaaattctcttataaataggatcggagggagtat 24704501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 88
Target Start/End: Original strand, 5986950 - 5987000
Alignment:
Q  38 aaatacattcacttttgttgacctaaatttctcttataaataggaccggag 88  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||    
T  5986950 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggag 5987000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 6121939 - 6121893
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  6121939 acttttgttgacccaaaattctcttataaataggaccggagggagta 6121893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 31013114 - 31013036
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 79  Q
    ||||||||| |||||||| ||||||| |||| |  ||||||||||  ||||||||||| |||||| ||| |||||||||    
T  31013114 caacaaaagatgatgtatctagttaagaatttaaaccaaatacatctacttttgttgatctaaatgtcttttataaata 31013036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 46797809 - 46797855
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  46797809 acttttgttgacccaaaattctcttataaataggaccggagggagta 46797855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 47833695 - 47833741
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  47833695 acttttgttgacccaaaattctcttataaataggaccggagggagta 47833741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 51894628 - 51894582
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  51894628 acttttgttgacccaaaattctcttataaataggaccggagggagta 51894582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 3904727 - 3904682
Alignment:
Q  50 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||    
T  3904727 ttttgttgacccaaaattctcttataaataggaccggagggagtat 3904682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 40913235 - 40913194
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggagg 89  Q
    ||||||||||| | ||||||||||||||||||||||||||||    
T  40913235 acttttgttgatccaaatttctcttataaataggaccggagg 40913194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 94
Target Start/End: Complemental strand, 20538730 - 20538686
Alignment:
Q  50 ttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  20538730 ttttgttgacccaaaattctcttataaataggaccggagggagta 20538686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 33621880 - 33621928
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    ||||||||||||| ||| || ||||||||||||||||||||| ||||||    
T  33621880 acttttgttgacccaaaattatcttataaataggaccggagggagtatt 33621928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 48336347 - 48336395
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    ||||||||||||| ||| || ||||||||||||||||||||| ||||||    
T  48336347 acttttgttgacccaaaattttcttataaataggaccggagggagtatt 48336395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 3993060 - 3993107
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| |||||    
T  3993060 acttttgttgacccaaaattctcttataaataagaccggagggagtat 3993107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 6924724 - 6924802
Alignment:
Q  4 caaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggac 83  Q
    |||||||||||| || |  || |||||| || ||||||||||| |||||||||||||||| ||| ||||||| |||||||    
T  6924724 caaaagttgatgcatctgattcaaaatttagaccaaatacattaacttttgttgacctaacttt-tcttatatataggac 6924802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 53337454 - 53337501
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    |||||| |||||| ||| |||||||||||||||||||||||| |||||    
T  53337454 acttttattgacccaaaattctcttataaataggaccggagggagtat 53337501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 3372205 - 3372251
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| || ||||||||||||||||||||| ||||    
T  3372205 acttttgttgacccaaaattatcttataaataggaccggagggagta 3372251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 7579394 - 7579440
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| ||||||||||||||| |||||||| ||||    
T  7579394 acttttgttgacccaaaattctcttataaatagaaccggaggaagta 7579440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 43900633 - 43900679
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||| ||| ||| |||||||||||||||||||||||| ||||    
T  43900633 acttttgttaacccaaaattctcttataaataggaccggaggaagta 43900679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 44900126 - 44900080
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||  ||| ||||||||||||||||||||||| ||||    
T  44900126 acttttgttgaccagaatatctcttataaataggaccggagggagta 44900080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 41615732 - 41615683
Alignment:
Q  38 aaatacattcacttttgttgacctaaatttctcttataaataggaccgga 87  Q
    ||||||||  ||||||||||| | || |||||||||||||||||||||||    
T  41615732 aaatacatcaacttttgttgatccaattttctcttataaataggaccgga 41615683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 9876732 - 9876653
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaa-ttcagtccaaatacattcacttttgttgacctaaatttctcttataaatag 80  Q
    |||||||| || |||||||| |||||||| || |||| | ||||||| | ||||||| || ||||||||||||||||||||    
T  9876732 caacaaaaatttatgtatttggttaaaaaattgagtc-agatacattaaattttgttaacgtaaatttctcttataaatag 9876653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 80
Target Start/End: Original strand, 32822285 - 32822325
Alignment:
Q  40 atacattcacttttgttgacctaaatttctcttataaatag 80  Q
    |||||| || |||||||||||||||||| ||||||||||||    
T  32822285 atacatccatttttgttgacctaaatttttcttataaatag 32822325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 97
Target Start/End: Complemental strand, 47866060 - 47866032
Alignment:
Q  69 tcttataaataggaccggaggtagtattt 97  Q
    |||||||||||||||||||||||||||||    
T  47866060 tcttataaataggaccggaggtagtattt 47866032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Complemental strand, 55292143 - 55292107
Alignment:
Q  62 aaatttctcttataaataggaccggaggtagtatttg 98  Q
    ||||||||||| |||||||||||||||| ||||||||    
T  55292143 aaatttctcttgtaaataggaccggaggaagtatttg 55292107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 92; Significance: 1e-44; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 26471102 - 26471197
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26471102 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 26471197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 27159395 - 27159490
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27159395 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 27159490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 44668130 - 44668225
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44668130 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 44668225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 9981740 - 9981646
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9981740 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 9981646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 14984930 - 14984833
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatttg 98  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  14984930 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagatagtatttg 14984833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 31842832 - 31842925
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31842832 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 31842925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 39402003 - 39402096
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39402003 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 39402096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 47216736 - 47216829
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47216736 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 47216829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 11796026 - 11795930
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 97  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11796026 caacaaaagttgatgtatctagttaaaaattcagtccaaatgcattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 11795930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 12483665 - 12483760
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12483665 caacaaaagttgatgtatttagttcaaaattcagtctaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 12483760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 34042789 - 34042695
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  34042789 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagtat 34042695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 23278038 - 23278131
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  23278038 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 23278131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 44955243 - 44955336
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  44955243 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaataggaccggaggtagta 44955336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 1050981 - 1050888
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1050981 caactaaagttgatgtatctagttaaaaattcagtccaaatgcattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 1050888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 47777518 - 47777611
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  47777518 caacaaaagttgatgtatctagttcaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgggggtagta 47777611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 47588374 - 47588469
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  47588374 caacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccagaggtagtatt 47588469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 47969788 - 47969700
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc-ttataaataggaccggag 88  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  47969788 caacaaaagttgatgtatctagttaaaaattcagtctaaatacatttacttttgttgacctaaatttctctttataaataggaccggag 47969700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 17556846 - 17556751
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaataca-ttcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    |||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||| |||| |||||    
T  17556846 caacaaaagttgatgtatctagttaaaaattcagtccaaatacatttaacttttgttgacctaactttctcttataaataggaccagagggagtat 17556751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 25694412 - 25694317
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||| | |||| ||||||    
T  25694412 caacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttattgatctaaatttctcttataaataggatcagagggagtatt 25694317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 11897147 - 11897053
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    ||||||||||||||||||   |||||||||||||| || ||||||  |||||||||||||||| ||||||||||||||||||||||||| |||||    
T  11897147 caacaaaagttgatgtatccggttaaaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataggaccggagggagtat 11897053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 16448145 - 16448239
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    ||||||||||| |||||| | ||| ||||||||||||| ||||||  ||||||||||||| || ||||||||||||||||||||||||| |||||    
T  16448145 caacaaaagtttatgtatctggttcaaaattcagtccagatacatcaacttttgttgacccaactttctcttataaataggaccggagggagtat 16448239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 12213511 - 12213605
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    |||||||| ||||| |||||||||||||||||| || ||||||||| | ||||||||||||||  |||||||||||||| ||| ||||| |||||    
T  12213511 caacaaaaattgatttatttagttaaaaattcaatctaaatacattaatttttgttgacctaacattctcttataaataagactggagggagtat 12213605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 98
Target Start/End: Original strand, 11897138 - 11897188
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtatttg 98  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  11897138 acttttgttgacccaaatttctcttataaataggaccggagggagtatttg 11897188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 11989870 - 11989796
Alignment:
Q  5 aaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 79  Q
    |||| ||||||||||| ||||||||||||||||||||| |||   ||||||||||| || |||||||||||||||    
T  11989870 aaaaattgatgtatttggttaaaaattcagtccaaatatattagtttttgttgacccaactttctcttataaata 11989796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 95
Target Start/End: Original strand, 37552217 - 37552272
Alignment:
Q  40 atacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||| || |||||    
T  37552217 atacattcatttttgttgacccaaatttctcttataaataggaccggggggagtat 37552272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 12483684 - 12483626
Alignment:
Q  38 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  12483684 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 12483626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 37552222 - 37552141
Alignment:
Q  13 atgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||| | ||||||||||||||||| ||||||  ||| ||||||||  || ||| ||||||||||||||||||||| ||||    
T  37552222 atgtatctggttaaaaattcagtccagatacatgaactgttgttgactcaactttatcttataaataggaccggagggagta 37552141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 14984921 - 14984969
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  14984921 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 14984969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 44955252 - 44955212
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggag 88  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  44955252 acttttgttgacctaaaattctcttataaataggaccggag 44955212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 17556837 - 17556884
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    ||||||||||||| || ||||||||||||||||||||||||| |||||    
T  17556837 acttttgttgacccaagtttctcttataaataggaccggagggagtat 17556884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 25694403 - 25694450
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  25694403 acttttgttgacccaaaattctcttataaataggaccggagggagtat 25694450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 11796017 - 11796063
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  11796017 acttttgttgacccaaaattctcttataaataggaccggagggagta 11796063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 27159404 - 27159358
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  27159404 acttttgttgacccaaaattctcttataaataggaccggagggagta 27159358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 31842841 - 31842795
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  31842841 acttttgttgacccaaaattctcttataaataggaccggagggagta 31842795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 39402012 - 39401966
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  39402012 acttttgttgacccaaaattctcttataaataggaccggagggagta 39401966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 44668139 - 44668093
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  44668139 acttttgttgacccaaaattctcttataaataggaccggagggagta 44668093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 47777527 - 47777481
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  47777527 acttttgttgacccaaaattctcttataaataggaccggagggagta 47777481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 97
Target Start/End: Original strand, 1050972 - 1051021
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtattt 97  Q
    ||||| ||||||| ||| |||||||||||||||||||||||| |||||||    
T  1050972 actttagttgacccaaaattctcttataaataggaccggagggagtattt 1051021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 9981731 - 9981772
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggagg 89  Q
    ||||||||||||| ||| ||||||||||||||||||||||||    
T  9981731 acttttgttgacccaaaattctcttataaataggaccggagg 9981772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 97
Target Start/End: Original strand, 34042780 - 34042829
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtattt 97  Q
    ||||||||||||| ||| ||||||||||||||| |||||||| |||||||    
T  34042780 acttttgttgacccaaaattctcttataaatagaaccggagggagtattt 34042829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 47216745 - 47216698
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    ||||||||||||| ||| ||||||||||||||| |||||||| |||||    
T  47216745 acttttgttgacccaaaattctcttataaatagtaccggagggagtat 47216698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 97
Target Start/End: Original strand, 9302041 - 9302071
Alignment:
Q  67 tctcttataaataggaccggaggtagtattt 97  Q
    |||||||||||||||||||||||||||||||    
T  9302041 tctcttataaataggaccggaggtagtattt 9302071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 26471111 - 26471065
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||| | ||| |||||||||||||||||||||||| ||||    
T  26471111 acttttgttgatccaaaattctcttataaataggaccggagggagta 26471065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 95
Target Start/End: Original strand, 47678371 - 47678405
Alignment:
Q  61 taaatttctcttataaataggaccggaggtagtat 95  Q
    ||||||| |||||||||||||||||||||||||||    
T  47678371 taaatttttcttataaataggaccggaggtagtat 47678405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 85
Target Start/End: Original strand, 5392218 - 5392267
Alignment:
Q  36 ccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 85  Q
    ||||||||||  |||||| ||||||||||||||||||||| || ||||||    
T  5392218 ccaaatacatcaacttttattgacctaaatttctcttatatattggaccg 5392267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 11774605 - 11774536
Alignment:
Q  2 aacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctct 71  Q
    |||||||||||| |||| ||||| ||||||||||  || |||||  | |||||||||||||| |||||||    
T  11774605 aacaaaagttgacgtatctagttcaaaattcagtttaattacatcaatttttgttgacctaactttctct 11774536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 12043696 - 12043616
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagga 82  Q
    |||||||| || |||||| | |||||||||| | || ||||||||  |||||||||||| ||||| ||| ||||||||||||    
T  12043696 caacaaaaattaatgtatcttgttaaaaattgaatc-aaatacatcaacttttgttgacttaaatatcttttataaatagga 12043616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 29855085 - 29855142
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttga 58  Q
    |||||||||||||||||||| ||||||||||    | ||||||||| |||||||||||    
T  29855085 caacaaaagttgatgtatttggttaaaaatttgtacgaaatacattaacttttgttga 29855142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 95
Target Start/End: Original strand, 39720779 - 39720816
Alignment:
Q  58 acctaaatttctcttataaataggaccggaggtagtat 95  Q
    |||||| | |||||||||||||||||||||||||||||    
T  39720779 acctaattgtctcttataaataggaccggaggtagtat 39720816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 1598418 - 1598461
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacat 45  Q
    |||||||| ||||||||| | ||||||||||||||||||||||||    
T  1598418 caacaaaaattgatgtatat-gttaaaaattcagtccaaatacat 1598461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 12062635 - 12062679
Alignment:
Q  40 atacattcacttttgttgacctaaatttctcttataaataggacc 84  Q
    ||||||| | |||||||||  ||||||||||||||||||||||||    
T  12062635 atacattaatttttgttgatttaaatttctcttataaataggacc 12062679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 19391948 - 19392004
Alignment:
Q  38 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||| ||||||||| ||  || ||||||||||| ||||||| ||||||||||    
T  19391948 aaatacattaacttttgttcactcaactttctcttatatataggactggaggtagta 19392004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 89; Significance: 7e-43; HSPs: 2)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 4 - 96
Target Start/End: Complemental strand, 12950 - 12858
Alignment:
Q  4 caaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12950 caaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 12858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 12944 - 12992
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    ||||||| ||||| ||| |||||||||||||||||||||||| ||||||    
T  12944 acttttgctgacccaaaattctcttataaataggaccggagggagtatt 12992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1707 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 1428 - 1334
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  1428 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggatgtagtat 1334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 86; Significance: 4e-41; HSPs: 2)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 6168 - 6261
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6168 caacaaaagttgatgtatctagttaaaaattcagtccacatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 6261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 6177 - 6129
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 96  Q
    ||||||||||||| ||| || ||||||||||||||||||||| ||||||    
T  6177 acttttgttgacccaaaattttcttataaataggaccggagggagtatt 6129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 22 - 115
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 95  Q
    |||||||||||||||||||| |||||||||| |||||||||||||  ||||||||||||| |  |||||| ||||||||| |||||||| |||||    
T  22 caacaaaagttgatgtatttggttaaaaatttagtccaaatacatcaacttttgttgaccaatctttctc-tataaatagaaccggagggagtat 115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 13773 - 13845
Alignment:
Q  10 ttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggac 83  Q
    |||||||||| ||||||||||||||| |||||| ||| | ||||||||||||||||||||||||||| ||||||    
T  13773 ttgatgtatt-agttaaaaattcagttcaaatatattaatttttgttgacctaaatttctcttataagtaggac 13845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 231340 - 231433
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||| ||  ||||| ||||||||||||| ||||||  ||||||||||| | || |||||||||||| ||||| |||||| ||||    
T  231340 caacaaaagttgatatacctagttcaaaattcagtccagatacataaacttttgttgatccaactttctcttataattaggatcggagggagta 231433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 98
Target Start/End: Complemental strand, 231349 - 231299
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtatttg 98  Q
    ||||||||||||||||  ||||| |||||||||||||||||| ||||||||    
T  231349 acttttgttgacctaatattctcctataaataggaccggagggagtatttg 231299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 12390 - 12478
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 89  Q
    ||||||||  |||||||| | ||||| |||| || ||||| |||   |||||| |||||| |||| |||||||||||||||||||||||    
T  12390 caacaaaatgtgatgtatctggttaagaatttagaccaaacacaccaactttttttgaccaaaatatctcttataaataggaccggagg 12478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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