View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14717_low_7 (Length: 270)
Name: NF14717_low_7
Description: NF14717
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14717_low_7 |
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Alignment Details
Target: chr2 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 18 - 261
Target Start/End: Original strand, 44908066 - 44908318
Alignment:
| Q |
18 |
ccaactaggcctaatggtggatttggaagaagatggaagagtgctataatgaagaggaacacaaaatttgttgtggctaagcaagagaaaatgtttctca |
117 |
Q |
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| T |
44908066 |
ccaactaggcctaatggtggatttggaagaagatggaagagtgctataatgaagaggaacacaaaatttgttgtggctaagcaagagaaaatgtttctca |
44908165 |
T |
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| Q |
118 |
caaatggaaggtcttccatgccaaaaacagtagctcctgctttgtctggtgatcttgatggtttttctagtcctgttgtgtatcatttccaaaaggagca |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
44908166 |
caaatggaaggtcttccatgccaaaaacagtagctcctgctttgtctggtgatcttgatggtttttctagtcctgttgtgtataatttccaaaaggagca |
44908265 |
T |
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| Q |
218 |
aaagatg---------gatggtggtgatggtaataatgataatcatgatgatg |
261 |
Q |
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| T |
44908266 |
aaagatggatggagatgatggtggtgatggtaataatgataatcatgatgatg |
44908318 |
T |
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