View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14720_high_4 (Length: 283)
Name: NF14720_high_4
Description: NF14720
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14720_high_4 |
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Alignment Details
Target: chr3 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 10 - 268
Target Start/End: Complemental strand, 53697384 - 53697126
Alignment:
| Q |
10 |
gaaagtgaaatagtgtctaaccggagctttaatcaaaatacacatcaaatagatcataaagactacatttgaatttgctccatctctcttaatgtacagg |
109 |
Q |
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| T |
53697384 |
gaaagtgaaatagtgtctaaccggagctttaatcaaaatacacatcaaatagatcataaagactacatttgaatttgctccatctctcttaatgtacagg |
53697285 |
T |
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| Q |
110 |
taaagcaagacagcttgagatgctcagcacttcatatataagcatgggaagcaagttgttaaacaacacaataggcataaataagagtaatggtttcctt |
209 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53697284 |
taaagcaagacagcttgagatgctcagcacttcatatatgagcatgggaagcaagttgttaaacaacacaataggcataaataagagtaatggtttcctt |
53697185 |
T |
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| Q |
210 |
tcaaaggaaggaacacatgtacaataaaaataaacacaaaacagctagctaaactttat |
268 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
53697184 |
tcaaaggaaggaacacatgtacaataaaaataaacacaaaacagctagctaaacattat |
53697126 |
T |
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