View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14720_low_1 (Length: 639)

Name: NF14720_low_1
Description: NF14720
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14720_low_1
NF14720_low_1
[»] chr1 (77 HSPs)
chr1 (186-627)||(1814731-1815174)
chr1 (28-153)||(1815190-1815315)
chr1 (1-100)||(47989484-47989582)
chr1 (461-573)||(1830412-1830524)
chr1 (1-125)||(32461438-32461561)
chr1 (4-101)||(28273065-28273162)
chr1 (28-100)||(22881617-22881689)
chr1 (23-118)||(1704988-1705083)
chr1 (9-103)||(6612153-6612247)
chr1 (1-94)||(9828036-9828129)
chr1 (23-100)||(24577182-24577259)
chr1 (1-100)||(6427447-6427549)
chr1 (4-103)||(18556433-18556532)
chr1 (1-103)||(40917734-40917834)
chr1 (28-103)||(42359450-42359525)
chr1 (28-103)||(46348384-46348459)
chr1 (22-96)||(113289-113363)
chr1 (21-103)||(1486703-1486785)
chr1 (28-102)||(37598816-37598889)
chr1 (27-88)||(40258933-40258994)
chr1 (29-100)||(13997869-13997940)
chr1 (28-103)||(22515888-22515963)
chr1 (28-118)||(31672896-31672987)
chr1 (28-99)||(38078662-38078733)
chr1 (1-103)||(6414976-6415077)
chr1 (28-102)||(9103624-9103697)
chr1 (6-68)||(31694689-31694751)
chr1 (10-103)||(5376483-5376576)
chr1 (6-66)||(44482250-44482310)
chr1 (28-95)||(19058857-19058924)
chr1 (32-103)||(48450592-48450663)
chr1 (45-103)||(398783-398841)
chr1 (1-100)||(5944267-5944368)
chr1 (1-95)||(25934607-25934701)
chr1 (10-99)||(10572572-10572661)
chr1 (28-73)||(18337342-18337387)
chr1 (1-66)||(34371733-34371798)
chr1 (31-103)||(48040465-48040538)
chr1 (27-103)||(2896121-2896197)
chr1 (7-91)||(25361881-25361965)
chr1 (28-100)||(36878447-36878519)
chr1 (28-68)||(51410043-51410083)
chr1 (48-103)||(16812526-16812581)
chr1 (1-68)||(30173736-30173803)
chr1 (33-100)||(30359374-30359441)
chr1 (32-103)||(31015026-31015097)
chr1 (17-67)||(6332689-6332739)
chr1 (29-103)||(21378561-21378635)
chr1 (1-99)||(27471540-27471638)
chr1 (29-102)||(32434718-32434792)
chr1 (1-66)||(9629874-9629939)
chr1 (10-67)||(15449215-15449272)
chr1 (32-103)||(10577740-10577811)
chr1 (17-78)||(17778557-17778615)
chr1 (27-78)||(18190108-18190159)
chr1 (21-68)||(35919270-35919317)
chr1 (22-68)||(8117052-8117098)
chr1 (45-103)||(12443478-12443536)
chr1 (34-100)||(14359529-14359594)
chr1 (18-96)||(17754301-17754379)
chr1 (119-149)||(19326909-19326939)
chr1 (45-103)||(34298419-34298477)
chr1 (27-100)||(5898266-5898339)
chr1 (35-99)||(13011223-13011288)
chr1 (42-103)||(15641045-15641106)
chr1 (31-68)||(18471318-18471355)
chr1 (46-99)||(21366039-21366092)
chr1 (1-58)||(52284731-52284787)
chr1 (414-454)||(1830520-1830560)
chr1 (23-103)||(6427333-6427413)
chr1 (1-105)||(21032188-21032291)
chr1 (28-68)||(21620973-21621013)
chr1 (28-68)||(28663626-28663666)
chr1 (28-72)||(30749854-30749898)
chr1 (28-72)||(30771305-30771349)
chr1 (28-120)||(39953147-39953239)
chr1 (28-100)||(41877471-41877543)
[»] chr5 (50 HSPs)
chr5 (1-103)||(21522733-21522835)
chr5 (1-103)||(21533299-21533401)
chr5 (7-118)||(39698509-39698620)
chr5 (1-100)||(21542016-21542115)
chr5 (11-101)||(21351889-21351979)
chr5 (23-103)||(13287395-13287475)
chr5 (1-103)||(36642736-36642838)
chr5 (28-105)||(6247603-6247680)
chr5 (28-103)||(21191057-21191132)
chr5 (1-103)||(6401481-6401583)
chr5 (1-94)||(21814253-21814346)
chr5 (1-106)||(30183529-30183634)
chr5 (28-97)||(33178014-33178083)
chr5 (12-103)||(19552530-19552619)
chr5 (7-103)||(19579684-19579780)
chr5 (32-103)||(14674252-14674323)
chr5 (21-100)||(31084309-31084388)
chr5 (27-118)||(42893328-42893419)
chr5 (28-116)||(10298539-10298627)
chr5 (31-99)||(24906305-24906373)
chr5 (1-88)||(7677703-7677790)
chr5 (9-103)||(37328826-37328920)
chr5 (2-106)||(12641654-12641758)
chr5 (23-94)||(30135305-30135377)
chr5 (9-100)||(41995457-41995546)
chr5 (28-99)||(21576746-21576817)
chr5 (28-102)||(8420011-8420085)
chr5 (42-103)||(9449452-9449513)
chr5 (1-101)||(3966488-3966588)
chr5 (28-68)||(15884006-15884046)
chr5 (35-103)||(4105240-4105310)
chr5 (18-97)||(41633724-41633803)
chr5 (28-103)||(15382460-15382537)
chr5 (21-86)||(5894827-5894892)
chr5 (46-103)||(6770526-6770583)
chr5 (29-102)||(17177025-17177098)
chr5 (30-103)||(43001783-43001856)
chr5 (28-99)||(43564870-43564939)
chr5 (31-78)||(7218271-7218318)
chr5 (1-100)||(11685925-11686023)
chr5 (9-68)||(21319927-21319986)
chr5 (28-95)||(28588675-28588742)
chr5 (8-83)||(40131624-40131699)
chr5 (45-103)||(22013397-22013455)
chr5 (28-94)||(30099039-30099105)
chr5 (53-105)||(6072339-6072392)
chr5 (19-68)||(12199948-12199997)
chr5 (1-102)||(30098310-30098411)
chr5 (8-100)||(12264810-12264902)
chr5 (47-103)||(40000555-40000611)
[»] chr6 (60 HSPs)
chr6 (1-101)||(16766682-16766782)
chr6 (1-103)||(8365493-8365595)
chr6 (11-103)||(9107354-9107446)
chr6 (28-103)||(34595117-34595192)
chr6 (23-101)||(10770670-10770748)
chr6 (28-103)||(8776974-8777049)
chr6 (29-100)||(16833294-16833365)
chr6 (6-100)||(5970087-5970181)
chr6 (21-103)||(12696307-12696389)
chr6 (1-94)||(16488564-16488657)
chr6 (1-94)||(18367828-18367921)
chr6 (28-103)||(426515-426590)
chr6 (28-99)||(7801157-7801228)
chr6 (28-103)||(17841590-17841665)
chr6 (28-97)||(7977831-7977900)
chr6 (1-78)||(9522899-9522976)
chr6 (2-103)||(17435182-17435283)
chr6 (28-96)||(853860-853928)
chr6 (23-103)||(7930288-7930368)
chr6 (28-103)||(28152082-28152156)
chr6 (33-99)||(1681745-1681811)
chr6 (6-68)||(8713998-8714060)
chr6 (28-101)||(7938101-7938174)
chr6 (28-100)||(5626697-5626769)
chr6 (28-103)||(15489733-15489808)
chr6 (1-99)||(17302543-17302642)
chr6 (32-99)||(31959146-31959213)
chr6 (28-78)||(403865-403915)
chr6 (28-118)||(7265594-7265684)
chr6 (23-101)||(19044449-19044527)
chr6 (1-83)||(31384923-31385004)
chr6 (28-103)||(3398602-3398676)
chr6 (45-103)||(9658862-9658920)
chr6 (23-65)||(9911524-9911566)
chr6 (27-118)||(27904036-27904129)
chr6 (28-78)||(28715303-28715353)
chr6 (28-100)||(3209367-3209440)
chr6 (28-101)||(6898282-6898355)
chr6 (34-103)||(17341671-17341740)
chr6 (28-119)||(32978900-32978986)
chr6 (23-103)||(9027161-9027241)
chr6 (28-103)||(23771562-23771636)
chr6 (51-98)||(24115871-24115918)
chr6 (11-98)||(32313392-32313479)
chr6 (11-101)||(21395292-21395381)
chr6 (27-100)||(24645466-24645540)
chr6 (17-99)||(26562676-26562758)
chr6 (33-90)||(1191706-1191763)
chr6 (28-73)||(1700365-1700410)
chr6 (6-103)||(5000605-5000702)
chr6 (28-101)||(5732511-5732584)
chr6 (1-66)||(9195728-9195793)
chr6 (28-97)||(19040341-19040410)
chr6 (1-38)||(23130446-23130483)
chr6 (1-66)||(25038045-25038110)
chr6 (11-99)||(34290063-34290149)
chr6 (28-95)||(4877933-4878001)
chr6 (28-68)||(7027260-7027300)
chr6 (28-68)||(26402681-26402721)
chr6 (28-68)||(31429004-31429044)
[»] chr3 (64 HSPs)
chr3 (2-94)||(14209105-14209197)
chr3 (1-99)||(4987265-4987363)
chr3 (2-103)||(14216875-14216976)
chr3 (2-103)||(14223004-14223105)
chr3 (28-100)||(16000017-16000089)
chr3 (1-100)||(41961624-41961723)
chr3 (1-103)||(15796268-15796370)
chr3 (9-103)||(28812499-28812592)
chr3 (6-94)||(34910309-34910397)
chr3 (28-99)||(10954939-10955010)
chr3 (28-103)||(55401058-55401133)
chr3 (23-121)||(27505211-27505309)
chr3 (1-103)||(750592-750695)
chr3 (28-103)||(8587022-8587097)
chr3 (28-103)||(10335287-10335362)
chr3 (29-100)||(20503451-20503522)
chr3 (28-103)||(28917984-28918059)
chr3 (27-101)||(10268486-10268560)
chr3 (1-103)||(14832082-14832184)
chr3 (28-118)||(18426917-18427007)
chr3 (21-118)||(25948881-25948978)
chr3 (28-100)||(21479104-21479176)
chr3 (9-100)||(14829676-14829766)
chr3 (30-97)||(26508099-26508166)
chr3 (1-100)||(34185097-34185196)
chr3 (1-102)||(2620029-2620128)
chr3 (28-101)||(25775493-25775567)
chr3 (23-100)||(39756222-39756299)
chr3 (1-89)||(55212960-55213047)
chr3 (11-78)||(1509547-1509614)
chr3 (28-103)||(26492206-26492281)
chr3 (28-78)||(51206354-51206404)
chr3 (21-78)||(49651780-49651837)
chr3 (1-101)||(17005593-17005693)
chr3 (28-103)||(8383240-8383315)
chr3 (45-116)||(29112298-29112369)
chr3 (1-99)||(9800027-9800125)
chr3 (23-100)||(14747547-14747625)
chr3 (33-103)||(24205047-24205117)
chr3 (22-103)||(3164020-3164101)
chr3 (10-103)||(4990950-4991043)
chr3 (1-78)||(16789020-16789097)
chr3 (51-100)||(40052318-40052367)
chr3 (28-100)||(3610619-3610691)
chr3 (28-68)||(8593155-8593195)
chr3 (45-101)||(14979166-14979222)
chr3 (6-66)||(16192729-16192789)
chr3 (31-99)||(21256990-21257058)
chr3 (20-100)||(22774063-22774143)
chr3 (1-100)||(25064895-25064992)
chr3 (28-100)||(35222924-35222996)
chr3 (33-101)||(35994744-35994811)
chr3 (28-103)||(10318036-10318110)
chr3 (34-97)||(11610510-11610573)
chr3 (47-118)||(23870579-23870650)
chr3 (28-78)||(7928458-7928508)
chr3 (45-103)||(21720747-21720805)
chr3 (28-78)||(38731226-38731276)
chr3 (1-66)||(11665964-11666029)
chr3 (28-68)||(3865692-3865732)
chr3 (33-117)||(5339077-5339161)
chr3 (28-100)||(25093488-25093560)
chr3 (28-100)||(33359747-33359819)
chr3 (28-68)||(40993336-40993376)
[»] chr7 (58 HSPs)
chr7 (4-101)||(24339627-24339724)
chr7 (6-99)||(7438693-7438786)
chr7 (9-100)||(9408316-9408407)
chr7 (1-95)||(11665414-11665508)
chr7 (1-78)||(26033435-26033512)
chr7 (23-103)||(27945024-27945104)
chr7 (10-98)||(11272569-11272659)
chr7 (1-103)||(43027449-43027545)
chr7 (21-103)||(13770674-13770756)
chr7 (28-101)||(25481887-25481960)
chr7 (1-94)||(25822647-25822740)
chr7 (21-101)||(5409830-5409910)
chr7 (27-103)||(11061076-11061152)
chr7 (9-68)||(21560521-21560580)
chr7 (1-100)||(26329356-26329455)
chr7 (1-121)||(32308079-32308205)
chr7 (6-100)||(15902808-15902902)
chr7 (18-68)||(18039017-18039067)
chr7 (28-88)||(3991322-3991382)
chr7 (23-103)||(18215182-18215262)
chr7 (1-68)||(2334268-2334334)
chr7 (32-103)||(24105661-24105732)
chr7 (28-78)||(19213811-19213861)
chr7 (27-117)||(23191865-23191955)
chr7 (3-100)||(6630888-6630985)
chr7 (17-78)||(13300418-13300479)
chr7 (28-101)||(15680794-15680867)
chr7 (28-100)||(7197298-7197370)
chr7 (28-100)||(8234132-8234204)
chr7 (21-73)||(9778513-9778565)
chr7 (28-103)||(18213034-18213110)
chr7 (22-98)||(22602705-22602781)
chr7 (27-99)||(33994199-33994271)
chr7 (21-68)||(32094014-32094061)
chr7 (28-99)||(35861951-35862022)
chr7 (33-103)||(43249976-43250046)
chr7 (36-100)||(13557750-13557817)
chr7 (28-121)||(28155535-28155628)
chr7 (12-100)||(3520327-3520415)
chr7 (2-66)||(27229286-27229350)
chr7 (31-99)||(40287361-40287428)
chr7 (45-88)||(1656674-1656717)
chr7 (45-100)||(22868028-22868083)
chr7 (28-103)||(26733287-26733362)
chr7 (28-66)||(21880172-21880210)
chr7 (45-99)||(41020483-41020537)
chr7 (27-72)||(640127-640172)
chr7 (11-68)||(1885591-1885648)
chr7 (27-100)||(5835233-5835306)
chr7 (22-83)||(7058429-7058490)
chr7 (14-103)||(19206033-19206122)
chr7 (1-106)||(21930609-21930713)
chr7 (27-100)||(22484011-22484084)
chr7 (10-103)||(37742506-37742599)
chr7 (27-68)||(48438564-48438605)
chr7 (4-60)||(4794915-4794971)
chr7 (23-103)||(18013070-18013150)
chr7 (28-100)||(21826259-21826331)
[»] chr4 (55 HSPs)
chr4 (1-94)||(24613675-24613768)
chr4 (1-100)||(19482654-19482753)
chr4 (6-116)||(4383338-4383447)
chr4 (1-120)||(22234864-22234984)
chr4 (1-66)||(30982852-30982917)
chr4 (28-103)||(23292987-23293062)
chr4 (1-103)||(5414146-5414248)
chr4 (35-105)||(11651142-11651212)
chr4 (4-101)||(27706154-27706251)
chr4 (28-100)||(21945489-21945561)
chr4 (28-103)||(30298929-30299005)
chr4 (28-103)||(30327797-30327873)
chr4 (28-103)||(12797339-12797413)
chr4 (28-95)||(12895275-12895342)
chr4 (28-103)||(35157986-35158061)
chr4 (28-105)||(16303267-16303344)
chr4 (21-100)||(3947760-3947839)
chr4 (28-102)||(49431009-49431084)
chr4 (28-91)||(54580024-54580087)
chr4 (29-103)||(6485613-6485687)
chr4 (23-100)||(12708132-12708210)
chr4 (21-103)||(12895110-12895191)
chr4 (1-67)||(47264005-47264071)
chr4 (23-100)||(11596348-11596425)
chr4 (28-101)||(16073380-16073452)
chr4 (29-78)||(29205452-29205501)
chr4 (35-100)||(40481623-40481687)
chr4 (23-78)||(28000738-28000794)
chr4 (28-68)||(42640547-42640587)
chr4 (1-100)||(847937-848036)
chr4 (1-68)||(19312353-19312420)
chr4 (30-100)||(24543967-24544038)
chr4 (19-96)||(28084511-28084589)
chr4 (28-78)||(28964249-28964299)
chr4 (28-106)||(34306805-34306882)
chr4 (4-78)||(51701266-51701340)
chr4 (45-102)||(36635308-36635365)
chr4 (10-103)||(40742574-40742667)
chr4 (1-118)||(46083965-46084081)
chr4 (28-68)||(715608-715648)
chr4 (28-68)||(752934-752974)
chr4 (28-100)||(2361976-2362048)
chr4 (1-120)||(37496665-37496789)
chr4 (28-67)||(6879466-6879505)
chr4 (28-103)||(40179637-40179712)
chr4 (6-100)||(15029751-15029844)
chr4 (45-99)||(20743296-20743350)
chr4 (28-94)||(38847013-38847079)
chr4 (22-87)||(5775353-5775418)
chr4 (22-100)||(50280867-50280947)
chr4 (47-103)||(7012049-7012105)
chr4 (20-68)||(11931298-11931346)
chr4 (51-103)||(20521873-20521925)
chr4 (42-78)||(30522930-30522966)
chr4 (31-99)||(31800482-31800550)
[»] chr8 (54 HSPs)
chr8 (5-105)||(15816107-15816207)
chr8 (1-103)||(22651959-22652061)
chr8 (1-94)||(29447084-29447177)
chr8 (1-103)||(29510278-29510380)
chr8 (1-103)||(2572030-2572132)
chr8 (28-103)||(20873052-20873127)
chr8 (28-103)||(36450755-36450830)
chr8 (17-101)||(13436954-13437038)
chr8 (35-105)||(41838131-41838201)
chr8 (8-100)||(4673406-4673498)
chr8 (28-103)||(18170483-18170558)
chr8 (28-103)||(18634051-18634126)
chr8 (28-99)||(22595981-22596052)
chr8 (23-102)||(30271287-30271366)
chr8 (33-99)||(41831946-41832012)
chr8 (28-105)||(5813573-5813650)
chr8 (17-78)||(25566849-25566910)
chr8 (1-78)||(28745506-28745583)
chr8 (28-100)||(4786339-4786411)
chr8 (30-105)||(25192350-25192425)
chr8 (27-98)||(31556985-31557055)
chr8 (27-93)||(4298886-4298952)
chr8 (28-78)||(4948660-4948710)
chr8 (1-78)||(21465420-21465497)
chr8 (10-103)||(28384977-28385070)
chr8 (7-91)||(11927066-11927150)
chr8 (17-105)||(14692441-14692528)
chr8 (27-105)||(22204620-22204700)
chr8 (1-100)||(8343302-8343401)
chr8 (33-100)||(18407705-18407772)
chr8 (28-119)||(34897052-34897143)
chr8 (28-78)||(8342980-8343030)
chr8 (28-98)||(24613509-24613578)
chr8 (1-63)||(29447467-29447529)
chr8 (1-66)||(26902149-26902214)
chr8 (28-101)||(30077388-30077461)
chr8 (29-66)||(40332211-40332248)
chr8 (1-100)||(24362175-24362275)
chr8 (28-100)||(24669419-24669491)
chr8 (52-103)||(3677769-3677820)
chr8 (29-100)||(18964163-18964234)
chr8 (58-105)||(24196628-24196675)
chr8 (21-68)||(24858030-24858076)
chr8 (29-68)||(31514891-31514930)
chr8 (33-100)||(44067502-44067569)
chr8 (7-93)||(11944658-11944744)
chr8 (119-149)||(19177456-19177486)
chr8 (27-105)||(20679395-20679473)
chr8 (119-149)||(44206254-44206284)
chr8 (1-99)||(24727726-24727826)
chr8 (40-116)||(6065670-6065746)
chr8 (28-100)||(13844597-13844669)
chr8 (45-73)||(22493507-22493535)
chr8 (23-79)||(31548289-31548345)
[»] chr2 (55 HSPs)
chr2 (28-103)||(18421946-18422021)
chr2 (1-103)||(34784956-34785058)
chr2 (2-103)||(30717505-30717606)
chr2 (6-101)||(11223842-11223937)
chr2 (28-103)||(15972856-15972931)
chr2 (1-100)||(26769497-26769596)
chr2 (1-103)||(15657847-15657949)
chr2 (28-101)||(20242728-20242801)
chr2 (28-103)||(19536398-19536474)
chr2 (32-103)||(30404855-30404926)
chr2 (28-103)||(37558960-37559035)
chr2 (20-110)||(12668416-12668506)
chr2 (27-101)||(18841013-18841087)
chr2 (18-103)||(23058433-23058519)
chr2 (9-78)||(4882678-4882747)
chr2 (9-102)||(37419727-37419820)
chr2 (31-103)||(6940238-6940310)
chr2 (28-103)||(20539675-20539750)
chr2 (21-103)||(24894372-24894454)
chr2 (1-103)||(34337155-34337252)
chr2 (34-103)||(21374706-21374775)
chr2 (28-100)||(21624252-21624325)
chr2 (22-95)||(33153415-33153488)
chr2 (28-103)||(2438720-2438793)
chr2 (28-100)||(20473308-20473380)
chr2 (28-100)||(36756345-36756417)
chr2 (28-100)||(38117160-38117232)
chr2 (21-103)||(14996217-14996300)
chr2 (28-103)||(30335400-30335475)
chr2 (1-100)||(36096349-36096448)
chr2 (33-103)||(12940941-12941011)
chr2 (1-119)||(27084229-27084343)
chr2 (1-58)||(35056896-35056953)
chr2 (28-87)||(974746-974805)
chr2 (39-105)||(29367381-29367448)
chr2 (45-103)||(16069272-16069330)
chr2 (28-68)||(5040752-5040792)
chr2 (27-103)||(21091706-21091782)
chr2 (1-105)||(27286266-27286370)
chr2 (45-124)||(24009259-24009337)
chr2 (3-66)||(24067273-24067336)
chr2 (28-99)||(38442295-38442365)
chr2 (28-86)||(18255981-18256039)
chr2 (45-107)||(19573958-19574019)
chr2 (45-103)||(21616745-21616803)
chr2 (45-99)||(21782836-21782890)
chr2 (29-103)||(41843424-41843498)
chr2 (30-103)||(23718009-23718082)
chr2 (30-103)||(24105681-24105754)
chr2 (34-103)||(39323247-39323316)
chr2 (1-66)||(44860340-44860405)
chr2 (28-117)||(20922929-20923016)
chr2 (1-65)||(28524447-28524511)
chr2 (10-73)||(36409612-36409673)
chr2 (28-64)||(44635520-44635556)
[»] scaffold0018 (2 HSPs)
scaffold0018 (22-103)||(178813-178895)
scaffold0018 (34-105)||(192256-192327)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-103)||(241577-241679)
[»] scaffold0450 (1 HSPs)
scaffold0450 (1-114)||(8609-8722)
[»] scaffold0223 (1 HSPs)
scaffold0223 (19-103)||(20155-20239)
[»] scaffold0103 (1 HSPs)
scaffold0103 (1-103)||(51794-51888)
[»] scaffold0306 (1 HSPs)
scaffold0306 (28-103)||(13383-13458)
[»] scaffold0171 (2 HSPs)
scaffold0171 (21-100)||(23406-23485)
scaffold0171 (9-68)||(23529-23588)
[»] scaffold0152 (1 HSPs)
scaffold0152 (28-103)||(21869-21944)
[»] scaffold0136 (1 HSPs)
scaffold0136 (1-100)||(3823-3922)
[»] scaffold0027 (1 HSPs)
scaffold0027 (28-103)||(46665-46740)
[»] scaffold0361 (1 HSPs)
scaffold0361 (36-117)||(14498-14580)
[»] scaffold0019 (1 HSPs)
scaffold0019 (1-100)||(71709-71810)
[»] scaffold0008 (1 HSPs)
scaffold0008 (2-103)||(263347-263448)
[»] scaffold0004 (3 HSPs)
scaffold0004 (34-118)||(92775-92859)
scaffold0004 (28-99)||(123612-123686)
scaffold0004 (28-73)||(83173-83218)
[»] scaffold0652 (1 HSPs)
scaffold0652 (28-103)||(463-538)
[»] scaffold0053 (1 HSPs)
scaffold0053 (28-103)||(8781-8856)
[»] scaffold0086 (1 HSPs)
scaffold0086 (2-68)||(2946-3012)
[»] scaffold0011 (1 HSPs)
scaffold0011 (28-102)||(17750-17824)
[»] scaffold0044 (1 HSPs)
scaffold0044 (1-66)||(53200-53265)
[»] scaffold0021 (1 HSPs)
scaffold0021 (30-103)||(130465-130538)
[»] scaffold0623 (1 HSPs)
scaffold0623 (1-101)||(5970-6070)
[»] scaffold0083 (1 HSPs)
scaffold0083 (28-103)||(45531-45607)
[»] scaffold0036 (1 HSPs)
scaffold0036 (1-99)||(9721-9819)
[»] scaffold0246 (1 HSPs)
scaffold0246 (35-100)||(19562-19626)
[»] scaffold0025 (1 HSPs)
scaffold0025 (28-68)||(23788-23828)
[»] scaffold0722 (1 HSPs)
scaffold0722 (28-106)||(7033-7111)
[»] scaffold0122 (2 HSPs)
scaffold0122 (28-94)||(8002-8067)
scaffold0122 (13-101)||(8651-8739)
[»] scaffold0050 (1 HSPs)
scaffold0050 (28-110)||(70254-70336)
[»] scaffold0007 (1 HSPs)
scaffold0007 (33-103)||(225274-225344)
[»] scaffold0123 (1 HSPs)
scaffold0123 (1-66)||(44499-44564)
[»] scaffold0793 (1 HSPs)
scaffold0793 (28-68)||(4884-4924)
[»] scaffold0227 (1 HSPs)
scaffold0227 (35-118)||(7319-7403)
[»] scaffold0066 (1 HSPs)
scaffold0066 (39-94)||(33375-33430)
[»] scaffold1528 (1 HSPs)
scaffold1528 (18-96)||(1025-1103)
[»] scaffold0168 (1 HSPs)
scaffold0168 (10-103)||(21026-21119)
[»] scaffold0116 (1 HSPs)
scaffold0116 (28-101)||(9883-9956)


Alignment Details
Target: chr1 (Bit Score: 377; Significance: 0; HSPs: 77)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 377; E-Value: 0
Query Start/End: Original strand, 186 - 627
Target Start/End: Complemental strand, 1815174 - 1814731
Alignment:
Q  186 aaaccctcacccacatatagctgccgccacgcccctcccttgcactgccaccacagccgctgtgttttctgcaaaaacgttgtttccgcgccctcctctt 285  Q
    ||||||||||||||||||||| |||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1815174 aaaccctcacccacatatagcagccgccacacccctcccttgcgccgccaccacagccgctgtgttttctgcaaaaacgttgtttccgcgccctcctctt 1815075  T
Q  286 tgcgcccctccattgccgttgtgcccttcaaacacgcttccgcgtccaaacagccgcgaactgacttccatgcgaccttcccttcgcgcagtcatctgat 385  Q
    ||| || |||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  1815074 tgctccgctccattgccattgtgcccttcaaacacgcttccacgtccaaacagccgcgaaccgacttccatgcgaccttcccttcgtgcagtcatctgat 1814975  T
Q  386 cagccactcaccgtctcctttgttcctgcactgatctagttgaagacatgacccacacaaacagaggccgcctaaaggcctaactacctagctataagat 485  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  1814974 cagccattcaccgtctcctttgttcctgcactgatctagttgaagacatgaccgacgcaaacagaggccgcctaaaggcctaactacctagctataagat 1814875  T
Q  486 tatgaatatcatagaatcaacgcataatgcaacagttctatatattctatttgaatactctcatcggtctattgatgaaccaaatatagtttagtctatc 585  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1814874 tatgaatatcatagaatcaacacataatgcaacagttctatatattctatttgaatactctcatcggtctattgatgaaccaaatatagtttagtctatc 1814775  T
Q  586 ataaatggaccaaaattattatattagt--agttatatattctt 627  Q
    ||||||||||||||||||||||||||||  ||||||||||||||    
T  1814774 ataaatggaccaaaattattatattagtacagttatatattctt 1814731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 28 - 153
Target Start/End: Complemental strand, 1815315 - 1815190
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcataggttgtatca 127  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  1815315 gacaccgacacttgtaattacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatccgtgcttcataggttgtatca 1815216  T
Q  128 taattagatagttgacctacacgtgt 153  Q
    | ||||||||||||||||||| ||||    
T  1815215 tgattagatagttgacctacatgtgt 1815190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 47989582 - 47989484
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    |||| |||||||||| |||||||||| |||||||||||||||| |||||||||||||||||||||||| |||| |||| |||||||||||||||||||||    
T  47989582 gacatgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgatttttttaaattatta-ttgtgtcggcgtgtcagtgtc 47989484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 461 - 573
Target Start/End: Complemental strand, 1830524 - 1830412
Alignment:
Q  461 aggcctaactacctagctataagattatgaatatcatagaatcaacgcataatgcaacagttctatatattctatttgaatactctcatcggtctattga 560  Q
    ||||||||||||||||| |||||||||||  ||||||||||||||| ||||||||||||||| | | |||||||||| ||||||||||| ||| |||| |    
T  1830524 aggcctaactacctagccataagattatgcgtatcatagaatcaacacataatgcaacagttatgtgtattctatttaaatactctcattggtatattaa 1830425  T
Q  561 tgaaccaaatata 573  Q
    |||||| ||||||    
T  1830424 tgaacctaatata 1830412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 32461438 - 32461561
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||||||||||| ||||||||||  ||||| ||||||||| ||||| | |||||||||||||||| |||| |||| ||||| |||||||||| ||||    
T  32461438 gacacgtgtcgtgtccgacaccgacac-acaccaacacttgtaattacattaaattatgtgattttttcaaattattagttgtgccggcgtgtcactgtc 32461536  T
Q  101 cgtatttgtgcttcataggttgtat 125  Q
     ||||  ||||||| ||||||||||    
T  32461537 tgtatccgtgcttcctaggttgtat 32461561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 28273065 - 28273162
Alignment:
Q  4 acgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 101  Q
    |||||||||||| |||| ||| | |||||||||||||||| |||||||||||||| ||||||||| |||| |||| ||||||| || |||||||||||    
T  28273065 acgtgtcgtgtccgacatcgataggacaccgacacttgtaattacactgaattatatgattttttcaaatgattagttgtgtcagcatgtcagtgtcc 28273162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 28 - 100
Target Start/End: Original strand, 22881617 - 22881689
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    |||||||||||||||| ||||||| |||||||||||||||| |||| |||| |||||||||||||||||||||    
T  22881617 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtc 22881689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 23 - 118
Target Start/End: Original strand, 1704988 - 1705083
Alignment:
Q  23 gacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcatag 118  Q
    |||| |||||||||||||||| |||| ||||||||||||||||||| |||| ||||  |||||||| ||||| ||||||||||  |||||||||||    
T  1704988 gacacgacaccgacacttgtaattaccctgaattatgtgattttttcaaattattagatgtgtcggtgtgtcggtgtccgtatccgtgcttcatag 1705083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 6612153 - 6612247
Alignment:
Q  9 tcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    ||||||| |||| ||||| |||||||||||||||| |||||||||||||||| ||||||| |||| ||||  ||| ||||||||||| |||||||    
T  6612153 tcgtgtccgacatcgacacgacaccgacacttgtaattacactgaattatgtaattttttcaaattattaactgtatcggcgtgtcattgtccgt 6612247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 9828129 - 9828036
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtc 94  Q
    ||||||||||||||||||||| |||| ||||||||||| |  | |||||||||||||||||||||| | |||| |||| | |||||||||||||    
T  9828129 gacacgtgtcgtgtctgacacggacacgacaccgacacataaaattacactgaattatgtgattttatcaaattattagtggtgtcggcgtgtc 9828036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 23 - 100
Target Start/End: Original strand, 24577182 - 24577259
Alignment:
Q  23 gacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    |||| |||||||||||||||| |||||||||||||||||||||||| |||| |||| ||||||| ||||||| |||||    
T  24577182 gacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcagcgtgtccgtgtc 24577259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 6427549 - 6427447
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatt---ttttaaaataattatttgtgtcggcgtgtcagt 97  Q
    ||||||||||||||| ||| || ||| ||||| |||||||||||||||| ||||||||||||||   |||| |||| |||| |||||||||| |||||||    
T  6427549 gacacgtgtcgtgtccgacgcctacacgacactgacacttgtagttacattgaattatgtgatttttttttcaaattattagttgtgtcggcatgtcagt 6427450  T
Q  98 gtc 100  Q
    |||    
T  6427449 gtc 6427447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 4 - 103
Target Start/End: Original strand, 18556433 - 18556532
Alignment:
Q  4 acgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||| ||||||||||| || |||||| | ||||||| ||||| | ||||||||||| |||| |||| ||||  |||||||||||||||||||||||    
T  18556433 acgtgtcgggtctgacaccgtcacgacaccaatacttgtaattacattaaattatgtgatattttcaaattattagctgtgtcggcgtgtcagtgtccgt 18556532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 40917834 - 40917734
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    |||||||||||||||  ||||||||| |||||||| ||||||| ||||||| |||  ||||||||||| |||| ||||  ||||||||||||||||| ||    
T  40917834 gacacgtgtcgtgtccaacaccgacacgacaccgagacttgtaattacacttaat--tgtgattttttcaaattattagctgtgtcggcgtgtcagtatc 40917737  T
Q  101 cgt 103  Q
    |||    
T  40917736 cgt 40917734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 42359450 - 42359525
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||||||||| |||||||||||| ||||||||||| |||| ||||  |||||| ||||||||||||||||    
T  42359450 gacaccgacacttgtaattacactgaattttgtgattttttcaaattattagatgtgtcagcgtgtcagtgtccgt 42359525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 46348384 - 46348459
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||||||||| ||||||| |||||| ||||||||| |||| ||||  |||||||||||||||||||||||    
T  46348384 gacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgt 46348459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 22 - 96
Target Start/End: Complemental strand, 113363 - 113289
Alignment:
Q  22 cgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcag 96  Q
    ||||| |||||| ||||||||| |||||||||||||||||||||||| |||| ||||  ||||||||||||||||    
T  113363 cgacacgacacctacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcag 113289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 21 - 103
Target Start/End: Original strand, 1486703 - 1486785
Alignment:
Q  21 ccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||| ||||||||||||| || |||||||||||||||||||||||| |||| ||||  |||||| |||||||||| |||||    
T  1486703 ccgacacgacaccgacacttataattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtatccgt 1486785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 37598889 - 37598816
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccg 102  Q
    ||||||||||||| || |||||||||||| ||||||||||| |||| |||| |||||||||||||||||||||||    
T  37598889 gacaccgacacttataattacactgaatt-tgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccg 37598816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 40258933 - 40258994
Alignment:
Q  27 tgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcgg 88  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||| |||| |||||||||    
T  40258933 tgacaccgacacttgtaattacactgaattatgtgattttttcaaattattaattgtgtcgg 40258994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 13997940 - 13997869
Alignment:
Q  29 acaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    |||||||||| | || |||||||||||||||||||||||| |||||||||   |||||||||||||||||||    
T  13997940 acaccgacacatataattacactgaattatgtgatttttttaaataattaacggtgtcggcgtgtcagtgtc 13997869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 22515888 - 22515963
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||||||||| ||||||| |||||||||||||||| |||| ||||  |||||| ||||||| ||||||||    
T  22515888 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtctgcgtgtccgtgtccgt 22515963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 31672896 - 31672987
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt-ccgtatttgtgcttcatag 118  Q
    |||||||| ||||||| ||||||||||||| |||||||||| |||| ||||  |||||||| |||||||||| ||||||  |||||||||||    
T  31672896 gacaccgagacttgtaattacactgaattaagtgattttttcaaattattagctgtgtcggtgtgtcagtgtcccgtatccgtgcttcatag 31672987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 38078662 - 38078733
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 99  Q
    |||||||||||||||| ||||| |||||||||||||||||| |||| ||||  ||||||| |||||||||||    
T  38078662 gacaccgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcgacgtgtcagtgt 38078733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 6414976 - 6415077
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||||||||||| |||| ||| ||||||||||||| | || ||| |||| ||||||||||||| | |||||||||    ||||||||||||||||||    
T  6414976 gacacgtgtcgtgtccgacatcga-atgacaccgacacatctaattaaactgtattatgtgattttctcaaataattagcgatgtcggcgtgtcagtgtc 6415074  T
Q  101 cgt 103  Q
    |||    
T  6415075 cgt 6415077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 9103697 - 9103624
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccg 102  Q
    |||||||||||||||| ||| ||| |||||||||||||||| |||| ||||  ||||||||||||||||||||||    
T  9103697 gacaccgacacttgta-ttaaactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccg 9103624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 31694689 - 31694751
Alignment:
Q  6 gtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 68  Q
    |||| ||||| |||||||||| |||||||||||||||| ||| ||||||||||||||||||||    
T  31694689 gtgttgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttttt 31694751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 103
Target Start/End: Original strand, 5376483 - 5376576
Alignment:
Q  10 cgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||| |||| ||||| ||||||||||||| || |||||||||||||||| ||||| | |||| ||||   |||||||||||| |||||||||    
T  5376483 cgtgtccgacatcgacacgacaccgacacttttaattacactgaattatgttattttcttaaattattagcggtgtcggcgtgttagtgtccgt 5376576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 44482310 - 44482250
Alignment:
Q  6 gtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 66  Q
    |||||||||| |||||||||| ||||||||||| | || ||||||||||||||||||||||    
T  44482310 gtgtcgtgtccgacaccgacacgacaccgacacatataattacactgaattatgtgatttt 44482250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 95
Target Start/End: Original strand, 19058857 - 19058924
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtca 95  Q
    |||||||||||||||| |||||||||||||||| || |||| |||| ||||  |||||||||||||||    
T  19058857 gacaccgacacttgtaattacactgaattatgttatctttttaaattattagctgtgtcggcgtgtca 19058924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 48450592 - 48450663
Alignment:
Q  32 ccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||||| ||||||| |||||||| ||||||| |||| ||||  ||||| |||||||||||||||||    
T  48450592 ccgacacttgtaattacactaaattatgttattttttcaaattattagctgtgttggcgtgtcagtgtccgt 48450663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 103
Target Start/End: Original strand, 398783 - 398841
Alignment:
Q  45 ttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||||||||||||||||| |||| ||||   ||||||||||||||||||||||    
T  398783 ttacactgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagtgtccgt 398841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 5944368 - 5944267
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatt--ttttaaaataattatttgtgtcggcgtgtcagtg 98  Q
    |||| |||| ||||| | || ||||| ||||||||||||| || ||||||||||||||||||||  |||| |||| ||||  |||| |||||||||||||    
T  5944368 gacatgtgttgtgtccgtcatcgacacgacaccgacacttataattacactgaattatgtgattttttttcaaattattagctgtggcggcgtgtcagtg 5944269  T
Q  99 tc 100  Q
    ||    
T  5944268 tc 5944267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 25934701 - 25934607
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtca 95  Q
    ||||||||||||||| |||||||||| || |||||||| | || |||||||| ||| ||||||||| || || | |||  |||||||||||||||    
T  25934701 gacacgtgtcgtgtccgacaccgacacgataccgacacatataattacactgtattttgtgattttctagaaaatttagctgtgtcggcgtgtca 25934607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 10 - 99
Target Start/End: Original strand, 10572572 - 10572661
Alignment:
Q  10 cgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 99  Q
    |||| |||||||| |||  |||||||||| | || |||||| ||||||||||||||| | |||| |||| | ||||||||||||||||||    
T  10572572 cgtgcctgacaccaacacaacaccgacacatttaattacaccgaattatgtgattttctcaaattattagtggtgtcggcgtgtcagtgt 10572661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 18337387 - 18337342
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaat 73  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||    
T  18337387 gacaccgacacttgtaattacactgaattatgtgattttttcaaat 18337342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 34371798 - 34371733
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 66  Q
    |||||||||||| || |||||| ||| ||||||||||| | || ||||||||||||||||||||||    
T  34371798 gacacgtgtcgtatccgacaccaacacgacaccgacacatataattacactgaattatgtgatttt 34371733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 31 - 103
Target Start/End: Original strand, 48040465 - 48040538
Alignment:
Q  31 accgacacttgtagttacactgaattatgtgat-tttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    ||||||||||||| ||||||| || |||||||  ||||| |||| ||||| |||||||||||||||||||||||    
T  48040465 accgacacttgtatttacactaaaatatgtgacctttttcaaattattatctgtgtcggcgtgtcagtgtccgt 48040538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 2896121 - 2896197
Alignment:
Q  27 tgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||||  | ||| ||||||||||||||||||||| | |||| ||||   ||||||||||||||||||||||    
T  2896121 tgacaccgacatatatagctacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtccgt 2896197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 25361965 - 25361881
Alignment:
Q  7 tgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgt 91  Q
    ||||||||| |||||||||| ||||| ||||| | || |||||||||||||||||||||| | |||| || | | ||||||||||    
T  25361965 tgtcgtgtccgacaccgacacgacactgacacatataattacactgaattatgtgattttctcaaattatcagtggtgtcggcgt 25361881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 100
Target Start/End: Complemental strand, 36878519 - 36878447
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||||||| | || |||||||||||||||||||||| | |||| ||||   |||||||||||||||||||    
T  36878519 gacaccgacacctataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtc 36878447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 51410083 - 51410043
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgatttttt 68  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  51410083 gacaccgacacttgtaattacactgaattatgtgatttttt 51410043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 48 - 103
Target Start/End: Complemental strand, 16812581 - 16812526
Alignment:
Q  48 cactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    ||||||||||||||||||| | |||| |||||| ||||||| ||||||||||||||    
T  16812581 cactgaattatgtgattttgtcaaattattattggtgtcggtgtgtcagtgtccgt 16812526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 30173736 - 30173803
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 68  Q
    |||| |||||||||| || || |||| |||||||||||||||| ||||||||| |||||| |||||||    
T  30173736 gacatgtgtcgtgtccgatacggacacgacaccgacacttgtaattacactgagttatgtaatttttt 30173803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 33 - 100
Target Start/End: Complemental strand, 30359441 - 30359374
Alignment:
Q  33 cgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||||| ||||||||| |||||||||||||||| |||| || | ||||| ||| |||||||||||    
T  30359441 cgacacttgcagttacactaaattatgtgattttttcaaattatcagttgtgccggtgtgtcagtgtc 30359374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 31015097 - 31015026
Alignment:
Q  32 ccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||||| |||||||||||||||||||||| | |||| ||||  ||||| |||| ||||||| ||||    
T  31015097 ccgacacttgtaattacactgaattatgtgattttctcaaattattagctgtgtaggcgcgtcagtgcccgt 31015026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 6332739 - 6332689
Alignment:
Q  17 gacaccgacatgacaccgacacttgtagttacactgaattatgtgattttt 67  Q
    |||||| ||| |||||||| ||||||| |||||||||||||||||||||||    
T  6332739 gacaccaacacgacaccgatacttgtaattacactgaattatgtgattttt 6332689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 21378635 - 21378561
Alignment:
Q  29 acaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    ||||||||||||||| |||||||||||||||| ||||||| || | ||||  |||||||| |||||  |||||||    
T  21378635 acaccgacacttgtaattacactgaattatgtaattttttcaatttattagctgtgtcggtgtgtccatgtccgt 21378561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 27471540 - 27471638
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 99  Q
    |||||||||||| ||  ||||||| |||||||| |||| |||| ||||||||||||||||| |||| | |||| ||||   || |||| ||||||||||    
T  27471540 gacacgtgtcgtatccaacaccgatatgacaccaacacatgtaattacactgaattatgtgcttttctcaaattattagcggtatcggtgtgtcagtgt 27471638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 102
Target Start/End: Original strand, 32434718 - 32434792
Alignment:
Q  29 acaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcgg-cgtgtcagtgtccg 102  Q
    |||| |||||||||| ||||| |||||||||||| ||||| |||| |||| |||||||||  |||||||||||||    
T  32434718 acacagacacttgtaattacaatgaattatgtgactttttcaaattattagttgtgtcggtggtgtcagtgtccg 32434792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 9629874 - 9629939
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 66  Q
    |||| |||||||||| |||| ||||| ||||||||||||| || | |||||||||||| |||||||    
T  9629874 gacatgtgtcgtgtccgacatcgacacgacaccgacacttataatcacactgaattatatgatttt 9629939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 15449215 - 15449272
Alignment:
Q  10 cgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttt 67  Q
    |||||| |||||||| | ||||| |||||||||| ||||||| |||||||||||||||    
T  15449215 cgtgtccgacaccgatacgacacagacacttgtaattacactaaattatgtgattttt 15449272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 10577740 - 10577811
Alignment:
Q  32 ccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    ||||||| | || |||||||| ||| ||||||||| ||||| |||||  |||||||||||||| ||||||||    
T  10577740 ccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtcggtgtccgt 10577811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 17778615 - 17778557
Alignment:
Q  17 gacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataatta 78  Q
    |||||||||| |||||||||||||||| ||||||||   ||||||||||||| |||| ||||    
T  17778615 gacaccgacacgacaccgacacttgtaattacactg---tatgtgattttttcaaattatta 17778557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 18190108 - 18190159
Alignment:
Q  27 tgacaccgacacttgtagttacactgaattatgtgattttttaaaataatta 78  Q
    ||||| ||||||||||| |||||||||||||||| ||||||| |||| ||||    
T  18190108 tgacatcgacacttgtaattacactgaattatgtaattttttcaaattatta 18190159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 35919270 - 35919317
Alignment:
Q  21 ccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 68  Q
    |||||| ||||| ||||||| || ||||||||||||||||||||||||    
T  35919270 ccgacacgacacggacacttataattacactgaattatgtgatttttt 35919317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 8117098 - 8117052
Alignment:
Q  22 cgacatgacaccgacacttgtagttacactgaattatgtgatttttt 68  Q
    |||||||||||| | ||||||| ||||||||||||||||| ||||||    
T  8117098 cgacatgacaccaatacttgtaattacactgaattatgtgttttttt 8117052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 45 - 103
Target Start/End: Original strand, 12443478 - 12443536
Alignment:
Q  45 ttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||||||||||||||| | |||| ||||  |||||||||||||| || |||||    
T  12443478 ttacactgaattatgtgattttctcaaattattagctgtgtcggcgtgtccgtatccgt 12443536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 14359529 - 14359594
Alignment:
Q  34 gacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    |||||||||| ||||||| |||||||||| ||||| |||| ||||  |||||||||||||| |||||    
T  14359529 gacacttgtaattacactaaattatgtga-tttttcaaattattagctgtgtcggcgtgtccgtgtc 14359594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 17754379 - 17754301
Alignment:
Q  18 acaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcag 96  Q
    |||||||||  |||| ||||| | ||||||||||||||||||| ||||||| |||| ||||   ||||||| |||||||    
T  17754379 acaccgacaccacactgacacatatagttacactgaattatgtaattttttcaaattattagcggtgtcggtgtgtcag 17754301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 119 - 149
Target Start/End: Original strand, 19326909 - 19326939
Alignment:
Q  119 gttgtatcataattagatagttgacctacac 149  Q
    |||||||||||||||||||||||||||||||    
T  19326909 gttgtatcataattagatagttgacctacac 19326939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 45 - 103
Target Start/End: Complemental strand, 34298477 - 34298419
Alignment:
Q  45 ttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||||||||||||||| | |||| |||| | ||||||| |||||||| |||||    
T  34298477 ttacactgaattatgtgattttctcaaattattagtggtgtcggtgtgtcagtttccgt 34298419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 5898266 - 5898339
Alignment:
Q  27 tgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    |||||||||| | | || |||||||||||||||||||||||| | || ||||   |||||||||| ||||||||    
T  5898266 tgacaccgacgcatataattacactgaattatgtgattttttcagattattagcggtgtcggcgtctcagtgtc 5898339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 99
Target Start/End: Original strand, 13011223 - 13011288
Alignment:
Q  35 acacttgtagttacactgaattatgtga-ttttttaaaataattatttgtgtcggcgtgtcagtgt 99  Q
    ||||||||| ||||||| |||||||||| |||||| |||| ||||  ||||||||| |||||||||    
T  13011223 acacttgtaattacacttaattatgtgatttttttcaaattattagctgtgtcggcatgtcagtgt 13011288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 103
Target Start/End: Original strand, 15641045 - 15641106
Alignment:
Q  42 tagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||||||| |||||||||| | |||| ||||   |||||||| |||||||||||||    
T  15641045 tagttacactgaatcatgtgattttcttaaattattagcagtgtcggcatgtcagtgtccgt 15641106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 68
Target Start/End: Complemental strand, 18471355 - 18471318
Alignment:
Q  31 accgacacttgtagttacactgaattatgtgatttttt 68  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  18471355 accgacacttgtaattatactgaattatgtgatttttt 18471318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 21366039 - 21366092
Alignment:
Q  46 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 99  Q
    ||||||||||||||| |||||||||||| ||||  |||| ||||||||| ||||    
T  21366039 tacactgaattatgttattttttaaaattattagctgtgccggcgtgtcggtgt 21366092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 52284787 - 52284731
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattat 58  Q
    |||| ||||||||||||||||||| ||  |||||||||||||| ||| ||||||||||    
T  52284787 gacatgtgtcgtgtctgacaccgatatt-caccgacacttgtaattatactgaattat 52284731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 414 - 454
Target Start/End: Complemental strand, 1830560 - 1830520
Alignment:
Q  414 cactgatctagttgaagacatgacccacacaaacagaggcc 454  Q
    |||||||||||||||||||| ||||||  ||||||||||||    
T  1830560 cactgatctagttgaagacacgacccatgcaaacagaggcc 1830520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 103
Target Start/End: Complemental strand, 6427413 - 6427333
Alignment:
Q  23 gacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||| |||||| |||| | || ||||| |||||||||||||||| | |||| ||||   |||| |||||||||||||||||    
T  6427413 gacacgacaccaacacatataattacattgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccgt 6427333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 21032291 - 21032188
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||| ||||||||| |||||| ||| |||||||||| ||||| ||| | | ||||| || ||||||| || || |||  |||||| | |||||||||||    
T  21032291 gacacatgtcgtgtccgacacccacacgacaccgacatttgtaattatatttaattaagtaatttttttaatta-ttaactgtgtcagtgtgtcagtgtc 21032193  T
Q  101 cgtat 105  Q
    |||||    
T  21032192 cgtat 21032188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 21621013 - 21620973
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgatttttt 68  Q
    ||||||||| ||||||  |||||||||||||||||||||||    
T  21621013 gacaccgacgcttgtaaatacactgaattatgtgatttttt 21620973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 28663666 - 28663626
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgatttttt 68  Q
    |||||||||||||||| |||||  |||||||||||||||||    
T  28663666 gacaccgacacttgtaattacatagaattatgtgatttttt 28663626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 30749898 - 30749854
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaa 72  Q
    ||||||||||| | || |||||||||||||||||||||| |||||    
T  30749898 gacaccgacacatataattacactgaattatgtgattttctaaaa 30749854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 30771349 - 30771305
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaa 72  Q
    ||||||||||| | || |||||||||||||||||||||| |||||    
T  30771349 gacaccgacacatataattacactgaattatgtgattttctaaaa 30771305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 28 - 120
Target Start/End: Original strand, 39953147 - 39953239
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcataggt 120  Q
    ||||||||||| |  | ||||||| |||||||||||||| |||||| ||||   |||||||||| || |||||| |||  || ||||||||||    
T  39953147 gacaccgacacatacaattacactaaattatgtgattttctaaaattattagcggtgtcggcgtttccgtgtccatatccgttcttcataggt 39953239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 28 - 100
Target Start/End: Original strand, 41877471 - 41877543
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    |||||||||||||||| ||||||| |||||||| ||||| | |||| ||||   ||||||||||  |||||||    
T  41877471 gacaccgacacttgtaattacactaaattatgtaattttctcaaattattagcggtgtcggcgtaccagtgtc 41877543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 8e-32; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 21522835 - 21522733
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||||||||||| |||||||||| |||||||||| ||||| |||||||||||||||| |||||||||||| ||||  ||||||||||||||||||||    
T  21522835 gacacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtc 21522736  T
Q  101 cgt 103  Q
    |||    
T  21522735 cgt 21522733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 21533401 - 21533299
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||||||||||| |||||||||| |||||||||| ||||| |||||||||||||||| |||||||||||| ||||  ||||||||||||||||||||    
T  21533401 gacacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtc 21533302  T
Q  101 cgt 103  Q
    |||    
T  21533301 cgt 21533299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 7 - 118
Target Start/End: Complemental strand, 39698620 - 39698509
Alignment:
Q  7 tgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatt 106  Q
    ||||||||| |||||||||| ||||| |||||||||| |||||||||||||||||||||||| |||| ||||  |||||| ||||||||||||||||||     
T  39698620 tgtcgtgtccgacaccgacacgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtgtccgtatc 39698521  T
Q  107 tgtgcttcatag 118  Q
     |||||||||||    
T  39698520 cgtgcttcatag 39698509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 21542115 - 21542016
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||||| || |||| |||| |||| |||||||||| ||||| ||||    
T  21542115 gacacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgttatctttttaaattattagttgtgtcggcatgtcaatgtc 21542016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 21351889 - 21351979
Alignment:
Q  11 gtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 101  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||  ||| |||| ||||||||| ||||||||||||    
T  21351889 gtgtcggacaccgacatgacaccgacacttgtaattacactgaattatgtgactttttccaattattagttgtgtcggtgtgtcagtgtcc 21351979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 23 - 103
Target Start/End: Original strand, 13287395 - 13287475
Alignment:
Q  23 gacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||| |||||||||    
T  13287395 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattatctgtgtcgacgtgttagtgtccgt 13287475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 36642736 - 36642838
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||||||||||| |||||| ||||||||||||||||| || ||||||| || ||||| | ||||| |||| ||||  ||||||||||||||||||||    
T  36642736 gacacgtgtcgtgtccgacaccaacatgacaccgacacttatatttacactaaaatatgtcactttttcaaattattaactgtgtcggcgtgtcagtgtc 36642835  T
Q  101 cgt 103  Q
    |||    
T  36642836 cgt 36642838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 6247680 - 6247603
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtat 105  Q
    |||||||||||||||| |||||||||||||||||||||||| |||| ||||  ||||||||||||||||||| |||||    
T  6247680 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagatgtgtcggcgtgtcagtgtgcgtat 6247603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 21191057 - 21191132
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||||||||| |||||||||||||||||||||||| |||| ||||  ||||||||| |||||||||||||    
T  21191057 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcatgtcagtgtccgt 21191132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 6401583 - 6401481
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||||||||||| ||||| |||| ||||||||||| | || |||||||| ||| ||||||||| ||||| | ||| ||||||||||||||| |||||    
T  6401583 gacacgtgtcgtgtccgacactgacacgacaccgacacatataattacactgtattttgtgattttctaaaaaatttagttgtgtcggcgtgtcggtgtc 6401484  T
Q  101 cgt 103  Q
    |||    
T  6401483 cgt 6401481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 21814346 - 21814253
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtc 94  Q
    ||||||||||||||| |||||||||| ||||||||||| | || |||||||| ||| ||||||||| ||||| |||||  ||||||||||||||    
T  21814346 gacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtc 21814253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 30183634 - 30183529
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    |||||||||||||||||| ||| ||| |||||||||||||||| ||| || |||| ||||||| |||| |||| |||| |||||||||| | ||||||||    
T  30183634 gacacgtgtcgtgtctgataccaacacgacaccgacacttgtaattaaaccgaataatgtgatattttcaaattattagttgtgtcggcatatcagtgtc 30183535  T
Q  101 cgtatt 106  Q
     |||||    
T  30183534 tgtatt 30183529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 33178083 - 33178014
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagt 97  Q
    |||||||||||||||| ||||||| |||||||||||||||| |||| |||| ||||||||||||||||||    
T  33178083 gacaccgacacttgtaattacactaaattatgtgatttttttaaattattagttgtgtcggcgtgtcagt 33178014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 12 - 103
Target Start/End: Original strand, 19552530 - 19552619
Alignment:
Q  12 tgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    ||||||||||||||| |||| |||||||| ||  |||||| |||||||||||||||| |||| ||||  |||||||||||||||||||||||    
T  19552530 tgtctgacaccgacacgacatcgacacttata--tacacttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgt 19552619  T

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Target: chr5; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 7 - 103
Target Start/End: Complemental strand, 19579780 - 19579684
Alignment:
Q  7 tgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    ||||||||| ||||| |||| |||||||||||||||| || |||| |||||||||||||| | |||| ||||  ||||||||||| |||||||||||    
T  19579780 tgtcgtgtccgacactgacacgacaccgacacttgtaattgcactaaattatgtgattttctcaaattattagctgtgtcggcgtatcagtgtccgt 19579684  T

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Target: chr5; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 14674323 - 14674252
Alignment:
Q  32 ccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||||| ||||||| |||||||||||||||| |||| ||||  |||||||||||||||||||||||    
T  14674323 ccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgt 14674252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 31084388 - 31084309
Alignment:
Q  21 ccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    |||||| |||| ||||||||||| ||||| |||||||||||||||||| |||| ||||  ||||||||||||||||||||    
T  31084388 ccgacacgacatcgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 31084309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 27 - 118
Target Start/End: Complemental strand, 42893419 - 42893328
Alignment:
Q  27 tgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcatag 118  Q
    ||||||||||||||||| |||||||| ||||||||||||||| |||| ||||  |||||||| ||||| |||||| |||  |||||||||||    
T  42893419 tgacaccgacacttgtaattacactggattatgtgattttttcaaattattagctgtgtcggtgtgtccgtgtccatatccgtgcttcatag 42893328  T

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Target: chr5; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 28 - 116
Target Start/End: Complemental strand, 10298627 - 10298539
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcat 116  Q
    |||||||||||||||| ||||| || ||||||||| ||||| |||| |||| |||||||||||||| |||||||| ||  |||||||||    
T  10298627 gacaccgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggcgtgttagtgtccgcatccgtgcttcat 10298539  T

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Target: chr5; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 31 - 99
Target Start/End: Original strand, 24906305 - 24906373
Alignment:
Q  31 accgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 99  Q
    ||||||||||||| |||||||||||||||| ||||||| |||| ||||| ||||| |||||||||||||    
T  24906305 accgacacttgtaattacactgaattatgtcattttttcaaattattatctgtgttggcgtgtcagtgt 24906373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 7677790 - 7677703
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcgg 88  Q
    |||| ||| |||||| |||||||||| ||||||||||||| || || ||||||||||||||||||||| |||| ||||  ||||||||    
T  7677790 gacatgtgacgtgtcagacaccgacacgacaccgacacttctaattgcactgaattatgtgattttttcaaattattagctgtgtcgg 7677703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 37328826 - 37328920
Alignment:
Q  9 tcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    ||||||| |||||||||| ||||||||||| |||| |||||||||||| ||||||||||  |||| |||   |||||||| || |||||||||||    
T  37328826 tcgtgtccgacaccgacacgacaccgacacatgtaattacactgaattttgtgatttttacaaattatttgctgtgtcggtgtatcagtgtccgt 37328920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 12641758 - 12641654
Alignment:
Q  2 acacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 101  Q
    |||||||| |||||||||||| ||| ||||| ||||| || | ||| ||| |||||||||||||||| |||| ||||  | ||||| ||||||| |||||    
T  12641758 acacgtgttgtgtctgacaccaacacgacactgacacgtgcaattatactaaattatgtgatttttttaaattattaactatgtcgacgtgtcattgtcc 12641659  T
Q  102 gtatt 106  Q
    |||||    
T  12641658 gtatt 12641654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 30135377 - 30135305
Alignment:
Q  23 gacatgacaccgacacttgtagttacactgaattatgtgatt-ttttaaaataattatttgtgtcggcgtgtc 94  Q
    ||||||||||||||||||||| ||||| ||| |||||||||| |||| |||| |||| |||||||||||||||    
T  30135377 gacatgacaccgacacttgtaattacaatgagttatgtgatttttttcaaattattagttgtgtcggcgtgtc 30135305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 41995546 - 41995457
Alignment:
Q  9 tcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||| |||||||| | | |||||||||||  | ||||| ||||||||||||||||||  ||| |||| |||||||||||||||||||||    
T  41995546 tcgtgtccgacaccgatacggcaccgacactt--aattacattgaattatgtgattttttcgaattattagttgtgtcggcgtgtcagtgtc 41995457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 21576746 - 21576817
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 99  Q
    |||| ||||||||||| |||||||||||||||||||||||| |||| ||||  ||||| ||||| |||||||    
T  21576746 gacatcgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgttggcgtatcagtgt 21576817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 8420085 - 8420011
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccg 102  Q
    |||||||||||||||| ||||| |||||||||| ||||||| |||| ||||  | ||||||||||||| ||||||    
T  8420085 gacaccgacacttgtaattacattgaattatgttattttttcaaattattagctatgtcggcgtgtcattgtccg 8420011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 42 - 103
Target Start/End: Complemental strand, 9449513 - 9449452
Alignment:
Q  42 tagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||| |||||||||||||||| | |||| |||||| ||||||||||| ||||||||||    
T  9449513 tagttacattgaattatgtgattttctcaaattattattggtgtcggcgtgccagtgtccgt 9449452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 3966588 - 3966488
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||| ||| ||||| ||||| |||| ||||||||||| | || |||||||||||| ||||||||| | |||| ||||   |||||||| ||||||||||    
T  3966588 gacacatgttgtgtccgacactgacacgacaccgacacatataattacactgaattgtgtgattttctcaaattattagcggtgtcggcatgtcagtgtc 3966489  T
Q  101 c 101  Q
    |    
T  3966488 c 3966488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 15884046 - 15884006
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgatttttt 68  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  15884046 gacaccgacacttgtaattacactgaattatgtgatttttt 15884006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 35 - 103
Target Start/End: Complemental strand, 4105310 - 4105240
Alignment:
Q  35 acacttgtagttacactgaattatgtga--ttttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    ||||||||| ||||||||||||||||||  |||||| |||| |||| || ||||||||||||||| |||||    
T  4105310 acacttgtaattacactgaattatgtgatcttttttcaaattattagttatgtcggcgtgtcagtatccgt 4105240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 41633803 - 41633724
Alignment:
Q  18 acaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagt 97  Q
    ||||||| | |||||||||| ||||| |||||||||||||||| | ||||| |||| ||||  |||||||| ||||||||    
T  41633803 acaccgatacgacaccgacatttgtaattacactgaattatgtaaatttttcaaattattagctgtgtcggagtgtcagt 41633724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 103
Target Start/End: Complemental strand, 15382537 - 15382460
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtga--ttttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||||||||| ||| |||||||||| |||  |||||| |||| ||||  ||||||||||||||| |||||||    
T  15382537 gacaccgacacttgtaattatactgaattatatgattttttttcaaattattagctgtgtcggcgtgtcattgtccgt 15382460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 5894827 - 5894892
Alignment:
Q  21 ccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtc 86  Q
    |||||| |||||||||||||||||||| | | |||||| ||||||||| |||| |||| |||||||    
T  5894827 ccgacacgacaccgacacttgtagttagattaaattatatgattttttcaaattattagttgtgtc 5894892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 46 - 103
Target Start/End: Complemental strand, 6770583 - 6770526
Alignment:
Q  46 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    ||||||||||||||||||||| | |||| |||| ||||||| | ||||||||||||||    
T  6770583 tacactgaattatgtgattttcttaaattattagttgtgtcagtgtgtcagtgtccgt 6770526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 29 - 102
Target Start/End: Original strand, 17177025 - 17177098
Alignment:
Q  29 acaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccg 102  Q
    ||||||||||||||| ||||| |||||| | ||||||||| |||| ||||  ||||| ||||| ||||||||||    
T  17177025 acaccgacacttgtaattacaatgaattttttgattttttcaaattattagctgtgttggcgtatcagtgtccg 17177098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 43001856 - 43001783
Alignment:
Q  30 caccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||| ||||||||| |||||||||||||||| ||||||| |||| ||||   |||||| | |||||||||||||    
T  43001856 caccaacacttgtaattacactgaattatgtaattttttcaaattattagcagtgtcgacatgtcagtgtccgt 43001783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 43564939 - 43564870
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 99  Q
    ||||||||||||| || ||||||| |||||||||||||||  |||| || |  |||||||||||||||||||    
T  43564939 gacaccgacacttataattacactaaattatgtgatttttccaaattatga--tgtgtcggcgtgtcagtgt 43564870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 78
Target Start/End: Original strand, 7218271 - 7218318
Alignment:
Q  31 accgacacttgtagttacactgaattatgtgattttttaaaataatta 78  Q
    ||||||||||||| ||||||||||||||||||||| || |||| ||||    
T  7218271 accgacacttgtaattacactgaattatgtgatttatttaaattatta 7218318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 11686023 - 11685925
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||||||||||| |||||||| | ||||||||||| | || ||||||| ||||||| || ||| | |||| ||||   |||||||| ||||||||||    
T  11686023 gacacgtgtcgtgtccgacaccga-acgacaccgacacatataattacactaaattatgcgactttctcaaattattagcggtgtcggcatgtcagtgtc 11685925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 21319927 - 21319986
Alignment:
Q  9 tcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 68  Q
    ||||||| ||||||||||||||| ||||||||||  ||||| |||||||| | |||||||    
T  21319927 tcgtgtccgacaccgacatgacatcgacacttgtgattacattgaattatatcatttttt 21319986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 95
Target Start/End: Original strand, 28588675 - 28588742
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtca 95  Q
    ||||||||||| | || |||||||||||||||||||||| | |||| ||||   ||||||||||||||    
T  28588675 gacaccgacacctataattacactgaattatgtgattttctcaaattattaccggtgtcggcgtgtca 28588742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 40131699 - 40131624
Alignment:
Q  8 gtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgt 83  Q
    ||||||||||||| ||| | |||||||| | || || ||| |||||||||||||||||||| |||| |||| ||||    
T  40131699 gtcgtgtctgacatcgatacgacaccgatatttataattaaactgaattatgtgattttttcaaattattagttgt 40131624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 45 - 103
Target Start/End: Complemental strand, 22013455 - 22013397
Alignment:
Q  45 ttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    ||||||| |||||||| ||||||  |||| ||||  |||||||||||||||||||||||    
T  22013455 ttacactaaattatgtaatttttccaaattattagctgtgtcggcgtgtcagtgtccgt 22013397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 28 - 94
Target Start/End: Original strand, 30099039 - 30099105
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtc 94  Q
    ||||||||||| | || |||||| |||||||| |||| ||||||| | ||| |||||||||||||||    
T  30099039 gacaccgacacatataattacacagaattatgcgattgtttaaaaaatttagttgtgtcggcgtgtc 30099105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 105
Target Start/End: Original strand, 6072339 - 6072392
Alignment:
Q  53 aattatgtgatt-ttttaaaataattatttgtgtcggcgtgtcagtgtccgtat 105  Q
    |||||||||||| ||||||||| |||| || ||||||||||||||| |||||||    
T  6072339 aattatgtgattgttttaaaattattagttatgtcggcgtgtcagtatccgtat 6072392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 12199997 - 12199948
Alignment:
Q  19 caccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 68  Q
    |||| ||| |||||||||||||||| ||  ||||||||||||||||||||    
T  12199997 caccaacacgacaccgacacttgtaattgtactgaattatgtgatttttt 12199948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 30098411 - 30098310
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||||||||||| ||||| |||  || |||||||  | || ||||| |||||||||||||||| | |||| ||||   || ||| ||||||||||||    
T  30098411 gacacgtgtcgtgtccgacactgactcgataccgacatctataattacattgaattatgtgattttctcaaattattaacggtttcgtcgtgtcagtgtc 30098312  T
Q  101 cg 102  Q
    ||    
T  30098311 cg 30098310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 12264810 - 12264902
Alignment:
Q  8 gtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||| ||||||||||| ||||||  ||||| | || ||||||||||| |||| ||||| | |||||||||   |||| ||| ||||||||||    
T  12264810 gtcgtatctgacaccgatatgacattgacacatataattacactgaatcatgtaattttctcaaataattagcggtgttggcatgtcagtgtc 12264902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 47 - 103
Target Start/End: Original strand, 40000555 - 40000611
Alignment:
Q  47 acactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||||||||||||||| |||| ||||   |||||| | |||||||||||||    
T  40000555 acactgaattatgtgattttttcaaattattaagagtgtcgacatgtcagtgtccgt 40000611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 1e-30; HSPs: 60)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 16766782 - 16766682
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||||| ||||| |||||||||| |||||||||||||||| |||||||||||||||||||||||| |||| ||||  ||||||||||||||||||||    
T  16766782 gacacgtgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 16766683  T
Q  101 c 101  Q
    |    
T  16766682 c 16766682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 8365493 - 8365595
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||||||||||| || ||||||| |||||||||||||||| |||||| |||||||||||| |||| |||| |||| |||||||||||||||||||||    
T  8365493 gacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtc 8365592  T
Q  101 cgt 103  Q
    |||    
T  8365593 cgt 8365595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 11 - 103
Target Start/End: Original strand, 9107354 - 9107446
Alignment:
Q  11 gtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    ||||| |||||||||| |||||||||||||||| |||||||||||| ||||||||||| |||| ||||  ||||||||||||| |||||||||    
T  9107354 gtgtccgacaccgacacgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagctgtgtcggcgtgttagtgtccgt 9107446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 28 - 103
Target Start/End: Complemental strand, 34595192 - 34595117
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||||||||| |||||||||||||||||||||||| |||| |||| |||||||||||||||| |||||||    
T  34595192 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcattgtccgt 34595117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 23 - 101
Target Start/End: Original strand, 10770670 - 10770748
Alignment:
Q  23 gacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 101  Q
    |||| |||||||||||||||| |||||||||||||||||||||||| |||| |||| |||||| |||||||||||||||    
T  10770670 gacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgttggcgtgtcagtgtcc 10770748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 8776974 - 8777049
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||| ||||||||| |||||||||||| ||||||||||| |||| |||| ||||||||||||||||||||||||    
T  8776974 gacaccaacacttgtaattacactgaattttgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgt 8777049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 16833365 - 16833294
Alignment:
Q  29 acaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||||||||||| |||||||||| ||||||||||||| |||| |||| |||||||||||||||||||||    
T  16833365 acaccgacacttgtaattacactgaagtatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtc 16833294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 6 - 100
Target Start/End: Original strand, 5970087 - 5970181
Alignment:
Q  6 gtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    |||||||||| |||||||||| |||||| ||| ||||| |||||||||||||||||||||||| |||| ||||  ||||||| |||||| |||||    
T  5970087 gtgtcgtgtccgacaccgacacgacacccacatttgtaattacactgaattatgtgattttttcaaattattaactgtgtcgacgtgtccgtgtc 5970181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 21 - 103
Target Start/End: Complemental strand, 12696389 - 12696307
Alignment:
Q  21 ccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||| ||||| |||||||||| |||||||||||||||| ||||||| |||| ||||  |||||||||||||||||||||||    
T  12696389 ccgacacgacactgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtgtccgt 12696307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 16488564 - 16488657
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtc 94  Q
    ||||||||||||||| |||||||||| ||||||||||| | || |||||||| ||| ||||||||| ||||| |||||  ||||||||||||||    
T  16488564 gacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtc 16488657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 18367921 - 18367828
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtc 94  Q
    |||| ||||||||||||||||||||| ||||||||||| | || |||||||| ||| ||||||||| ||||| |||||  ||||||||||||||    
T  18367921 gacatgtgtcgtgtctgacaccgacacgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtc 18367828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 426515 - 426590
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||||||||| ||||| | |||||||||||||||| |||| ||||  |||||||||||||||||||||||    
T  426515 gacaccgacacttgtaattacatttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgt 426590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 7801157 - 7801228
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 99  Q
    |||||||||||||||| |||| ||||||||||||||||||| |||| |||| |||||||||||||| |||||    
T  7801157 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggcgtgttagtgt 7801228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 17841590 - 17841665
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    ||||||| |||||||| ||||||| |||||||||||||||| |||| ||||  |||||||||||||||||||||||    
T  17841590 gacaccgtcacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgt 17841665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 28 - 97
Target Start/End: Original strand, 7977831 - 7977900
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagt 97  Q
    |||||||||||||||| |||||||||||||||| ||||||| |||| ||||  |||||||||||||||||    
T  7977831 gacaccgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagt 7977900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 9522976 - 9522899
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataatta 78  Q
    |||||||||||  || ||||||||||  ||||||||||||||| |||||||||||||||||||||||| |||| ||||    
T  9522976 gacacgtgtcggatccgacaccgacacaacaccgacacttgtaattacactgaattatgtgatttttttaaattatta 9522899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 2 - 103
Target Start/End: Complemental strand, 17435283 - 17435182
Alignment:
Q  2 acacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 101  Q
    |||||||||||||| |||| |||||  ||||  ||||||||| |||||||||||||||| |||||||||||| ||||  | ||||| ||| |||||||||    
T  17435283 acacgtgtcgtgtccgacatcgacaaaacactaacacttgtaattacactgaattatgtaattttttaaaattattagctatgtcgacgtatcagtgtcc 17435184  T
Q  102 gt 103  Q
    ||    
T  17435183 gt 17435182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 853860 - 853928
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcag 96  Q
    |||||||||||||||| || |||| |||||||||||||||| |||| |||| |||||||||||||||||    
T  853860 gacaccgacacttgtaattgcacttaattatgtgattttttcaaattattagttgtgtcggcgtgtcag 853928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 103
Target Start/End: Complemental strand, 7930368 - 7930288
Alignment:
Q  23 gacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||| |||||||||||||| | || |||| |||||||||||||||| |||| |||| |||||||||| |||||||||||||    
T  7930368 gacacgacaccgacacttgaaatttcactaaattatgtgattttttcaaattattaattgtgtcggcatgtcagtgtccgt 7930288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 103
Target Start/End: Complemental strand, 28152156 - 28152082
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||||||||| ||||||||||||||||||| |||| |||| ||||  | |||||||||||||||||||||    
T  28152156 gacaccgacacttgtaattacactgaattatgtgat-ttttcaaattattagctttgtcggcgtgtcagtgtccgt 28152082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 1681811 - 1681745
Alignment:
Q  33 cgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 99  Q
    ||||||||||| ||||||||||||| |||||||||| |||| |||| |||||||||||||| |||||    
T  1681811 cgacacttgtaattacactgaattacgtgattttttcaaattattagttgtgtcggcgtgttagtgt 1681745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 6 - 68
Target Start/End: Complemental strand, 8714060 - 8713998
Alignment:
Q  6 gtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 68  Q
    |||||||||| |||||||||| |||||| ||| ||||| ||||||||||||||||||||||||    
T  8714060 gtgtcgtgtccgacaccgacacgacacccacatttgtaattacactgaattatgtgatttttt 8713998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 7938174 - 7938101
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 101  Q
    ||||||||||||| || ||||||| |||||| ||||||||| |||| ||||  |||||||||||||||||||||    
T  7938174 gacaccgacacttataattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtcc 7938101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 100
Target Start/End: Original strand, 5626697 - 5626769
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||||||| | || |||||||||| || |||||||| ||||| ||||| |||||||||||||||||||||    
T  5626697 gacaccgacacatatatttacactgaactaagtgattttctaaaaaaattagttgtgtcggcgtgtcagtgtc 5626769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 15489733 - 15489808
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||||||||| ||||| |||||| ||| ||||||| |||| |||| |||||||| ||||| |||||||||    
T  15489733 gacaccgacacttgtaattacattgaattgtgtaattttttcaaattattagttgtgtcgacgtgttagtgtccgt 15489808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 17302642 - 17302543
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatt-ttttaaaataattatttgtgtcggcgtgtcagtgt 99  Q
    ||||||||| |||||| | || |||| ||||  |||||||||| ||||| |||||||||||||| |||| |||| |||| ||||||| ||||||||||||    
T  17302642 gacacgtgttgtgtctaatactgacacgacaatgacacttgtaattacattgaattatgtgatttttttcaaattattagttgtgtcagcgtgtcagtgt 17302543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 32 - 99
Target Start/End: Complemental strand, 31959213 - 31959146
Alignment:
Q  32 ccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 99  Q
    |||||||||||| |||||||| ||||||||||||||| |||| ||||  |||| ||||||||||||||    
T  31959213 ccgacacttgtaattacactgcattatgtgattttttcaaattattagctgtgacggcgtgtcagtgt 31959146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 403865 - 403915
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataatta 78  Q
    |||||||||||||||||||||||| |||||||||||||||| |||| ||||    
T  403865 gacaccgacacttgtagttacactaaattatgtgattttttcaaattatta 403915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 7265594 - 7265684
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcatag 118  Q
    ||||||||||| | || |||||||||||||||||||||| | |||| ||||   |||| |||||||||||||||| ||  |||||||||||    
T  7265594 gacaccgacacatataattacactgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccgaatacgtgcttcatag 7265684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 101
Target Start/End: Complemental strand, 19044527 - 19044449
Alignment:
Q  23 gacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 101  Q
    |||||||||||||||| | || | ||||||||||||||||| || | |||| |||| | ||||||||||||||||||||    
T  19044527 gacatgacaccgacacatataataacactgaattatgtgatattctcaaattattagtcgtgtcggcgtgtcagtgtcc 19044449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 31385004 - 31384923
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgt 83  Q
    |||||||||||||||  ||||  ||| ||||| |||||||||| |||||||||||||||||||||||| |||| |||| ||||    
T  31385004 gacacgtgtcgtgtccaacact-acacgacactgacacttgtaattacactgaattatgtgattttttcaaattattagttgt 31384923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 28 - 103
Target Start/End: Complemental strand, 3398676 - 3398602
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||| |||| || |||||||||||||| |||||||| ||| || |||  |||||||||||||||||||||||    
T  3398676 gacaccgatacttataattacactgaattatatgatttttcaaatta-ttagctgtgtcggcgtgtcagtgtccgt 3398602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 45 - 103
Target Start/End: Complemental strand, 9658920 - 9658862
Alignment:
Q  45 ttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||||||||||||||| | |||| ||||   ||||||||||||||||||||||    
T  9658920 ttacactgaattatgtgattttcttaaattattagcggtgtcggcgtgtcagtgtccgt 9658862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 65
Target Start/End: Original strand, 9911524 - 9911566
Alignment:
Q  23 gacatgacaccgacacttgtagttacactgaattatgtgattt 65  Q
    |||| |||||||||||||||| |||||||||||||||||||||    
T  9911524 gacacgacaccgacacttgtaattacactgaattatgtgattt 9911566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 118
Target Start/End: Original strand, 27904036 - 27904129
Alignment:
Q  27 tgacaccgacacttgtagttacactgaattatgtg--attttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcatag 118  Q
    ||||||||||| ||||| |||||||||||||||||   |||||| |||| ||||  | ||||||||||||| |||||||||  |||||| ||||    
T  27904036 tgacaccgacatttgtaattacactgaattatgtgttttttttttaaattattagctatgtcggcgtgtcaatgtccgtatccgtgctttatag 27904129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 28715353 - 28715303
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataatta 78  Q
    |||||||||||||||| |||||||||||||||| ||||||| |||| ||||    
T  28715353 gacaccgacacttgtaattacactgaattatgtcattttttcaaattatta 28715303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 28 - 100
Target Start/End: Complemental strand, 3209440 - 3209367
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgatt-ttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    |||||||||||||||| | ||||| |||||||||||| |||| |||| ||||  |||||||||||||| |||||    
T  3209440 gacaccgacacttgtaataacactaaattatgtgatttttttcaaattattagctgtgtcggcgtgtctgtgtc 3209367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 6898282 - 6898355
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 101  Q
    |||||||||||||||| ||||||| |||||||| |||| || |||| ||||   ||||| ||||||||||||||    
T  6898282 gacaccgacacttgtaattacacttaattatgtaatttgttcaaattattagacgtgtcagcgtgtcagtgtcc 6898355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 34 - 103
Target Start/End: Original strand, 17341671 - 17341740
Alignment:
Q  34 gacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    ||||||| || |||||||||||||||||||||| | |||| ||||   ||||||||||||||||| ||||    
T  17341671 gacacttataattacactgaattatgtgattttatcaaattattaacggtgtcggcgtgtcagtgcccgt 17341740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 28 - 119
Target Start/End: Original strand, 32978900 - 32978986
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtg-attttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcatagg 119  Q
    |||||||||||||||| ||||||| |||||||||  |||||| |||| ||||  |||||||||      ||||||||||||||||||||||||    
T  32978900 gacaccgacacttgtaattacacttaattatgtgttttttttcaaattattagctgtgtcggc------gtgtccgtatttgtgcttcatagg 32978986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 103
Target Start/End: Complemental strand, 9027241 - 9027161
Alignment:
Q  23 gacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||| ||||||||||| | || |||||| ||||||||||||| | | |||| ||||   ||||||||||||||||||||||    
T  9027241 gacacgacaccgacacatataattacacggaattatgtgattatctcaaattattagcggtgtcggcgtgtcagtgtccgt 9027161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 103
Target Start/End: Complemental strand, 23771636 - 23771562
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||| ||||| |||||||||| ||| | |||||||||| || |||  |||||||||||||| ||||||||    
T  23771636 gacaccgacatttgtaattacactgaagtatataattttttaaatta-ttaactgtgtcggcgtgtccgtgtccgt 23771562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 98
Target Start/End: Original strand, 24115871 - 24115918
Alignment:
Q  51 tgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtg 98  Q
    |||||||||||||||||| |||| |||| ||||||| |||||||||||    
T  24115871 tgaattatgtgattttttgaaattattagttgtgtcagcgtgtcagtg 24115918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 98
Target Start/End: Complemental strand, 32313479 - 32313392
Alignment:
Q  11 gtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtg 98  Q
    |||||||||||||||| |||||| |||| | || || || ||||| |||| ||||| | || | |||||| |||||||||||||||||    
T  32313479 gtgtctgacaccgacacgacacccacacatataattgcattgaatcatgttattttctcaacttattattggtgtcggcgtgtcagtg 32313392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 21395292 - 21395381
Alignment:
Q  11 gtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 101  Q
    ||||| ||||| |||| |||||||||||||||| ||||||| |||||||| ||||| | |||| ||||   |||| |||||||| ||||||    
T  21395292 gtgtccgacactgacacgacaccgacacttgtaattacactaaattatgt-attttctcaaattattagcggtgttggcgtgtcggtgtcc 21395381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 24645540 - 24645466
Alignment:
Q  27 tgacaccgacacttgtagttacactgaattatgtgatt-ttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    |||||||||||||||||  || |||||||||||||||| |||| |||| ||||  ||||||| | ||||||||||    
T  24645540 tgacaccgacacttgtaactatactgaattatgtgatttttttcaaattattagctgtgtcgacatgtcagtgtc 24645466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 26562758 - 26562676
Alignment:
Q  17 gacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 99  Q
    |||||||||| |||| |||||| | || |||||||||||||||||||||| | ||||  |||   ||||||||||||| ||||    
T  26562758 gacaccgacacgacatcgacacatataattacactgaattatgtgattttctcaaatttttagcagtgtcggcgtgtccgtgt 26562676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 1191706 - 1191763
Alignment:
Q  33 cgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcg 90  Q
    ||||||||||| |||||||||||| ||||| ||||| |||| ||||  ||||||||||    
T  1191706 cgacacttgtaattacactgaattttgtgaatttttcaaattattagctgtgtcggcg 1191763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 1700410 - 1700365
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaat 73  Q
    ||||||||||||| || |||||||||| ||||||||||||| ||||    
T  1700410 gacaccgacacttataattacactgaaatatgtgatttttttaaat 1700365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 5000605 - 5000702
Alignment:
Q  6 gtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    ||||||||||||||||||||||||||| ||||  |  | ||| ||||||| |||||||||| |  ||| ||||   |||||| ||||||||| |||||    
T  5000605 gtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgacgtgtcagtatccgt 5000702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 5732511 - 5732584
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 101  Q
    ||||||||||| | || ||||||| || ||||||||||| | |||| ||||   ||||||||||||||||||||    
T  5732511 gacaccgacacatataattacactaaaatatgtgattttctcaaattattaacggtgtcggcgtgtcagtgtcc 5732584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 9195728 - 9195793
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 66  Q
    ||||| ||||||||| |||||| ||| ||||||||||| | || ||||||| |||||||| |||||    
T  9195728 gacacatgtcgtgtcagacacctacacgacaccgacacatataattacactaaattatgtcatttt 9195793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 19040410 - 19040341
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagt 97  Q
    ||||| ||||| | || |||||||||||||||||||||| | |||| ||||   ||||||||||||||||    
T  19040410 gacacagacacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagt 19040341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 23130446 - 23130483
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacac 38  Q
    |||||||||||||||||||||| ||||||||| |||||    
T  23130446 gacacgtgtcgtgtctgacaccaacatgacactgacac 23130483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 25038045 - 25038110
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 66  Q
    ||||||||||||||| |||||| |||  | ||||||| ||||| ||||||| |||||||| |||||    
T  25038045 gacacgtgtcgtgtcggacaccaacacaataccgacatttgtaattacactaaattatgtaatttt 25038110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 99
Target Start/End: Original strand, 34290063 - 34290149
Alignment:
Q  11 gtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 99  Q
    ||||| ||||| |||| ||||||||||| |  | |||||||||||||||||||| |   |||| |||| |||||||||| |||||||||    
T  34290063 gtgtcggacactgacacgacaccgacacat--aattacactgaattatgtgattctcgcaaattattagttgtgtcggcatgtcagtgt 34290149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 28 - 95
Target Start/End: Complemental strand, 4878001 - 4877933
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtga-ttttttaaaataattatttgtgtcggcgtgtca 95  Q
    |||||||||||||||| ||| ||| |||||||||| |||||| |||| ||||  |||||||| ||||||    
T  4878001 gacaccgacacttgtaattatacttaattatgtgacttttttcaaattattagctgtgtcggtgtgtca 4877933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 7027300 - 7027260
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgatttttt 68  Q
    ||||||||||| | || ||||||||||||||||||||||||    
T  7027300 gacaccgacacatataattacactgaattatgtgatttttt 7027260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 26402681 - 26402721
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgatttttt 68  Q
    |||||||||||||||  |||||||||||||||| |||||||    
T  26402681 gacaccgacacttgtgattacactgaattatgtcatttttt 26402721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 31429004 - 31429044
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgatttttt 68  Q
    |||||| ||| ||||| ||||||||||||||||||||||||    
T  31429004 gacacctacatttgtaattacactgaattatgtgatttttt 31429044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 1e-30; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 14209197 - 14209105
Alignment:
Q  2 acacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtc 94  Q
    |||||||||||||| |||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  14209197 acacgtgtcgtgtccgacaccgacacgacactgacacttgtaattacactgaattatgtgattttttaaaattattagttgtgtcggcgtgtc 14209105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 4987265 - 4987363
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 99  Q
    |||||||||||||||  ||||||||| | |||| ||||||||| |||||||||||||||||||||||| |||| ||||  |||||||||||||||||||    
T  4987265 gacacgtgtcgtgtccaacaccgacacgtcaccaacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 4987363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 2 - 103
Target Start/End: Complemental strand, 14216976 - 14216875
Alignment:
Q  2 acacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 101  Q
    |||||||||||||| |||||  ||| ||||| |||||||||| |||||||||||||| |||| ||||||||| |||| |||||||| |||||||||||||    
T  14216976 acacgtgtcgtgtccgacactaacacgacacggacacttgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtcagtgtcc 14216877  T
Q  102 gt 103  Q
    ||    
T  14216876 gt 14216875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 2 - 103
Target Start/End: Complemental strand, 14223105 - 14223004
Alignment:
Q  2 acacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 101  Q
    |||||||||||||| |||||  ||| ||||| |||||||||| |||||||||||||| |||| ||||||||| |||| |||||||| |||||||||||||    
T  14223105 acacgtgtcgtgtccgacactaacacgacacggacacttgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtcagtgtcc 14223006  T
Q  102 gt 103  Q
    ||    
T  14223005 gt 14223004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 28 - 100
Target Start/End: Original strand, 16000017 - 16000089
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||| |||| |||||||||||||||||||||    
T  16000017 gacaccgacacttgtagttacactgaattatgttatttttttaaattattagttgtgtcggcgtgtcagtgtc 16000089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 41961624 - 41961723
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||||||||||| || ||||||| |||||||||||||||| |||||| |||| ||||||| |||| |||| |||| ||||| |||||||||||||||    
T  41961624 gacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattacaccgaataatgtgatattttcaaattattagttgtgacggcgtgtcagtgtc 41961723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 15796268 - 15796370
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||||| ||||| |||||| ||| |||||||||| ||||| |||||||||||||| ||||||||| |||| ||||  ||||||||||||||| ||||    
T  15796268 gacacgtgttgtgtccgacacctacacgacaccgacaattgtaattacactgaattatatgattttttcaaattattaactgtgtcggcgtgtcattgtc 15796367  T
Q  101 cgt 103  Q
    |||    
T  15796368 cgt 15796370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 9 - 103
Target Start/End: Complemental strand, 28812592 - 28812499
Alignment:
Q  9 tcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||||||| ||| ||||||||||||||||  |||||||||||||||||||| || |||| |||| ||||||||||||||| ||||||||    
T  28812592 tcgtgtctgacaccaacacgacaccgacacttgtaactacactgaattatgtgatttcttcaaattattagttgtgtcggcgtgtc-gtgtccgt 28812499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 34910397 - 34910309
Alignment:
Q  6 gtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtc 94  Q
    ||||| |||| |||||||| | ||||||||| |||||| |||||||||||||||||||||||| |||| |||| |||||||||||||||    
T  34910397 gtgtcatgtccgacaccgatacgacaccgactcttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtc 34910309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 10955010 - 10954939
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 99  Q
    |||||||||||||||  |||||||||||||||||||||||| |||| |||| ||||||||||||||||||||    
T  10955010 gacaccgacacttgtgattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgt 10954939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 28 - 103
Target Start/End: Complemental strand, 55401133 - 55401058
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||||||||| ||||||| |||||||||||||||| |||| |||| |||||||||||| |||||||||||    
T  55401133 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtatcagtgtccgt 55401058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 27505309 - 27505211
Alignment:
Q  23 gacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcataggtt 121  Q
    |||| |||||||||||||||| ||||||| ||||||||||||||| ||||| ||||  ||||||||| |||| || |||||||  ||||||||||||||    
T  27505309 gacacgacaccgacacttgtaattacacttaattatgtgatttttaaaaattattagctgtgtcggcttgtccgtatccgtatccgtgcttcataggtt 27505211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 750592 - 750695
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtc-agtgt 99  Q
    ||||||||||||||| || ||||||| |||||||||||||||| || ||  |||||||||||| |||| |||| |||| |||||||| |||||| |||||    
T  750592 gacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattgcagcgaattatgtgatattttcaaattattagttgtgtcgccgtgtcaagtgt 750691  T
Q  100 ccgt 103  Q
    ||||    
T  750692 ccgt 750695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 8587022 - 8587097
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||||||||| ||||||| |||||||||||||||| |||| | ||  |||||||||||||||||||||||    
T  8587022 gacaccgacacttgtaattacacttaattatgtgattttttcaaattactagatgtgtcggcgtgtcagtgtccgt 8587097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 10335287 - 10335362
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||||||||| ||||||| || ||||||| ||||| |||| |||| ||||||||||||||||||||||||    
T  10335287 gacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagttgtgtcggcgtgtcagtgtccgt 10335362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 20503522 - 20503451
Alignment:
Q  29 acaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||||||||||| |||||||||||||||| ||||||| |||| |||  |||||||||||||||||||||    
T  20503522 acaccgacacttgtaattacactgaattatgtcattttttcaaattatttgttgtgtcggcgtgtcagtgtc 20503451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 28 - 103
Target Start/End: Complemental strand, 28918059 - 28917984
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||||||||| |||||||||||||||||||||||| |||| ||||  | ||||||||||||||| |||||    
T  28918059 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctatgtcggcgtgtcagtttccgt 28917984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 27 - 101
Target Start/End: Original strand, 10268486 - 10268560
Alignment:
Q  27 tgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 101  Q
    |||||| |||||||||| ||||||| |||||||||||||||| |||| ||||  |||||||||||||||||||||    
T  10268486 tgacactgacacttgtaattacactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtcc 10268560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 14832184 - 14832082
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||||||||||| || ||||||| ||||| |||||||||| ||||| ||| |||||||||||||| |||| ||||  ||| |||||||||| || ||    
T  14832184 gacacgtgtcgtgtccgataccgacacgacactgacacttgtaattacattgagttatgtgattttttcaaattattagctgtatcggcgtgtccgtatc 14832085  T
Q  101 cgt 103  Q
    |||    
T  14832084 cgt 14832082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 28 - 118
Target Start/End: Complemental strand, 18427007 - 18426917
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcatag 118  Q
    ||||||||||  | || |||||| ||||||||||||||||| |||| |||| | ||||||||||||| |||||||||| ||||||||||||    
T  18427007 gacaccgacatatataattacaccgaattatgtgattttttgaaattattagtggtgtcggcgtgtccgtgtccgtatctgtgcttcatag 18426917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 25948881 - 25948978
Alignment:
Q  21 ccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcatag 118  Q
    |||||| |||||| |||||| || |||||||||||||||||||||||| |||| ||||   || ||||| ||||||||||||| | ||||||||||||    
T  25948881 ccgacacgacaccaacacttataattacactgaattatgtgattttttcaaattattagccgtatcggcatgtcagtgtccgtgtctgtgcttcatag 25948978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 28 - 100
Target Start/End: Complemental strand, 21479176 - 21479104
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    |||||||||||| ||| |||||||||||| ||||||||||| |||| ||||  ||||||||||||||||||||    
T  21479176 gacaccgacactagtaattacactgaattgtgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 21479104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 14829766 - 14829676
Alignment:
Q  9 tcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    |||||||  ||||||||| |||||||||||||||| ||||  ||||||||||||| |||| |||| ||||  ||||||||||||||||||||    
T  14829766 tcgtgtccaacaccgacacgacaccgacacttgtaattaccatgaattatgtgat-ttttcaaattattagctgtgtcggcgtgtcagtgtc 14829676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 26508166 - 26508099
Alignment:
Q  30 caccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagt 97  Q
    |||||||||||||| |||||||||||||||||||||||| |||| ||||  |||||| ||||||||||    
T  26508166 caccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagt 26508099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 34185097 - 34185196
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||| |||| |||| ||||  |||| |||||||||||||||| |||||||||||| ||||||||||| |||| ||||   |||||||||||||| ||||    
T  34185097 gacacatgtcttgtccgacatggacacgacaccgacacttgtaattacactgaattgtgtgattttttgaaattattagccgtgtcggcgtgtcactgtc 34185196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 2620029 - 2620128
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    |||| ||||||||||| |||||| || |||||| |||| |  ||||||||| |||||||||||||| | |||| |||| | |||||||||||||||||||    
T  2620029 gacatgtgtcgtgtctaacaccgccacgacaccaacacat--agttacacttaattatgtgattttctcaaatgattagtggtgtcggcgtgtcagtgtc 2620126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 25775567 - 25775493
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgatt-ttttaaaataattatttgtgtcggcgtgtcagtgtcc 101  Q
    |||||||||||||||| |||||||||||||||||||| |||| |||| ||||  ||||| |||||||||||||||    
T  25775567 gacaccgacacttgtaattacactgaattatgtgattattttcaaattattaaatgtgttggcgtgtcagtgtcc 25775493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 100
Target Start/End: Complemental strand, 39756299 - 39756222
Alignment:
Q  23 gacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    |||| |||||||||||||||| ||| | | |||||||||||||||| |||| |||| || ||||||||||||||||||    
T  39756299 gacacgacaccgacacttgtaattatattaaattatgtgatttttttaaattattaattttgtcggcgtgtcagtgtc 39756222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 55213047 - 55212960
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggc 89  Q
    ||||||||| ||| | ||||||||||  ||||||||||||||| || |||| ||||||||||||||||||||| ||||  |||||||||    
T  55213047 gacacgtgttgtgcccgacaccgacac-acaccgacacttgtaattgcactaaattatgtgattttttaaaattattaactgtgtcggc 55212960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 78
Target Start/End: Complemental strand, 1509614 - 1509547
Alignment:
Q  11 gtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataatta 78  Q
    ||||| |||||||| | |||||||||||||||| ||||||| |||||||||||||||| |||| ||||    
T  1509614 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 1509547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 26492206 - 26492281
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||| ||||||| |||||||||||| | ||||||||| |||| ||||  | |||||||||||||||||||||    
T  26492206 gacaccgatacttgtaattacactgaattgtatgattttttcaaattattagctctgtcggcgtgtcagtgtccgt 26492281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 51206354 - 51206404
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataatta 78  Q
    |||||||||||||||| |||||||||||||||||||||||| |||| ||||    
T  51206354 gacaccgacacttgtatttacactgaattatgtgattttttcaaattatta 51206404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 49651780 - 49651837
Alignment:
Q  21 ccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataatta 78  Q
    |||||| |||||||||||||||| ||||| |||||||||||||||||| |||| ||||    
T  49651780 ccgacacgacaccgacacttgtaattacagtgaattatgtgattttttcaaattatta 49651837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 17005593 - 17005693
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    |||||||||  ||||||||||| |||  |||||||||||| || |||||||||||||| ||||||| | |||| |||| | |||| || | |||||||||    
T  17005593 gacacgtgttatgtctgacaccaacacaacaccgacacttataattacactgaattatatgattttatcaaattattagtggtgttggtgagtcagtgtc 17005692  T
Q  101 c 101  Q
    |    
T  17005693 c 17005693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 28 - 103
Target Start/End: Complemental strand, 8383315 - 8383240
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    ||||||||||||| || |||||||||||||| ||||||| | |||| ||||   |||||||||||||| |||||||    
T  8383315 gacaccgacacttataattacactgaattatatgattttctcaaattattagcggtgtcggcgtgtcaatgtccgt 8383240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 45 - 116
Target Start/End: Original strand, 29112298 - 29112369
Alignment:
Q  45 ttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcat 116  Q
    |||||||||||||| ||||||| | ||||||||| | |||||  |||||||||||||||||  |||||||||    
T  29112298 ttacactgaattatatgattttctcaaataattagtggtgtcaacgtgtcagtgtccgtatccgtgcttcat 29112369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 9800125 - 9800027
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 99  Q
    ||||||| || | ||||| ||||||| |||||||||||||  | |||||| ||||||||| ||||| | |||| ||||   ||||||||||||||||||    
T  9800125 gacacgtatcatctctgataccgacacgacaccgacacttacaattacacggaattatgtaattttctcaaattattagaggtgtcggcgtgtcagtgt 9800027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 100
Target Start/End: Complemental strand, 14747625 - 14747547
Alignment:
Q  23 gacatgacaccgacacttgtagttacactgaattatgtgatt-ttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    |||| ||||| ||| |||||| ||||||| |||||||||||| |||| |||| ||||  ||||||||||||||||||||    
T  14747625 gacacgacacggacccttgtaattacactaaattatgtgatttttttcaaattattagctgtgtcggcgtgtcagtgtc 14747547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 33 - 103
Target Start/End: Original strand, 24205047 - 24205117
Alignment:
Q  33 cgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||| || |||||||| ||||||| ||||| | |||| |||||  ||||||||||||||||||||||    
T  24205047 cgacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgt 24205117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 3164020 - 3164101
Alignment:
Q  22 cgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    ||||| |||| | ||||||||  |||||||||||||||||||||||| |||| ||||  ||||||| |||| || |||||||    
T  3164020 cgacacgacatcaacacttgttcttacactgaattatgtgattttttcaaattattagctgtgtcgacgtgccattgtccgt 3164101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 10 - 103
Target Start/End: Original strand, 4990950 - 4991043
Alignment:
Q  10 cgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    ||||||||| ||| ||| ||| |||||||||||| |||||||||||||||| ||||| | |||  ||||   ||||||| |||||||| |||||    
T  4990950 cgtgtctgataccaacacgacgccgacacttgtaattacactgaattatgtaattttctcaaactattagcggtgtcggagtgtcagtctccgt 4991043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 16789097 - 16789020
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataatta 78  Q
    |||| ||||| |||| ||||| |||| |||||| |||||| || |||||||||||||| ||||||||| |||| ||||    
T  16789097 gacatgtgtcatgtccgacactgacacgacaccaacacttataattacactgaattatatgatttttttaaattatta 16789020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 40052367 - 40052318
Alignment:
Q  51 tgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    |||||||||||||||||| |||| ||||  ||||||||||||||||||||    
T  40052367 tgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 40052318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 100
Target Start/End: Complemental strand, 3610691 - 3610619
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    |||| ||||||| ||| ||||||||| |||||| ||||||| |||| ||||  ||||| ||||||||||||||    
T  3610691 gacaacgacactggtaattacactgagttatgttatttttttaaattattaactgtgttggcgtgtcagtgtc 3610619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 8593195 - 8593155
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgatttttt 68  Q
    |||||||||||||||| ||| ||||||||||||||||||||    
T  8593195 gacaccgacacttgtaattatactgaattatgtgatttttt 8593155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 14979222 - 14979166
Alignment:
Q  45 ttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 101  Q
    |||||||||||||||||||||||| |||| ||||  |||||||||||| || |||||    
T  14979222 ttacactgaattatgtgattttttcaaattattagctgtgtcggcgtgccattgtcc 14979166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 6 - 66
Target Start/End: Original strand, 16192729 - 16192789
Alignment:
Q  6 gtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 66  Q
    ||||||||||||||||||||| |||| | |||| | || |||||||||||||||| |||||    
T  16192729 gtgtcgtgtctgacaccgacacgacatcaacacatataattacactgaattatgttatttt 16192789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 31 - 99
Target Start/End: Original strand, 21256990 - 21257058
Alignment:
Q  31 accgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 99  Q
    ||||||||||||| ||| |||||||||||||||||||| |||| ||||  ||||||  |||||| ||||    
T  21256990 accgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgtcatcgtgtcggtgt 21257058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 22774063 - 22774143
Alignment:
Q  20 accgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||||||||||||||||| || |||||||||| ||||||| ||| |  ||| |||| | |||||| |||||| |||||    
T  22774063 accgacatgacaccgacacttataattacactgaaatatgtgactttgtctaattattagtggtgtcgacgtgtctgtgtc 22774143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 25064992 - 25064895
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||||||||||| |||||| ||| || ||| |||| |  | ||||||| |||||||||||||||| |||| ||||   |||||||||||||| ||||    
T  25064992 gacacgtgtcgtgtccgacaccaacacgataccaacacat--aattacactaaattatgtgattttttcaaatcattagcggtgtcggcgtgtcaatgtc 25064895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 100
Target Start/End: Complemental strand, 35222996 - 35222924
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||||||| | || ||||| |||||||||||||||| |||||   ||| ||||||||||||||| |||||    
T  35222996 gacaccgacacatataattacattgaattatgtgattttctaaaaatgttagttgtgtcggcgtgtctgtgtc 35222924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 35994744 - 35994811
Alignment:
Q  33 cgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 101  Q
    ||||||||||| |||||||||||||||||| ||||| |||| ||||  ||||||||| ||||| |||||    
T  35994744 cgacacttgtaattacactgaattatgtga-tttttcaaattattagctgtgtcggcttgtcattgtcc 35994811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 10318036 - 10318110
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    ||||||||||||| || ||||||| ||  |||||| ||||| |||| ||||  |||||||||||||||||||||||    
T  10318036 gacaccgacacttatatttacactaaaa-atgtgactttttcaaattattagctgtgtcggcgtgtcagtgtccgt 10318110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 11610573 - 11610510
Alignment:
Q  34 gacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagt 97  Q
    ||||||||||  ||||||||||||||||||||||| |||| ||||   |||| |||||||||||    
T  11610573 gacacttgtaactacactgaattatgtgatttttttaaattattagcggtgttggcgtgtcagt 11610510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 47 - 118
Target Start/End: Original strand, 23870579 - 23870650
Alignment:
Q  47 acactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcatag 118  Q
    |||||||||||| ||||||||| |||| ||||   |||||| |||||| ||||||||||  |||||||||||    
T  23870579 acactgaattatatgattttttcaaattattagcggtgtcgacgtgtccgtgtccgtatccgtgcttcatag 23870650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 7928508 - 7928458
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataatta 78  Q
    ||||||||||| | || |||||||||||||||||||||||| |||| ||||    
T  7928508 gacaccgacacatataattacactgaattatgtgattttttcaaattatta 7928458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 45 - 103
Target Start/End: Complemental strand, 21720805 - 21720747
Alignment:
Q  45 ttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    ||||||||||||||| ||| || | |||| |||||  ||||||||||||||||||||||    
T  21720805 ttacactgaattatgagatattctcaaattattatcggtgtcggcgtgtcagtgtccgt 21720747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 38731276 - 38731226
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataatta 78  Q
    ||||||||||| | ||  |||||||||||||||||||||||||||| ||||    
T  38731276 gacaccgacacatataactacactgaattatgtgattttttaaaattatta 38731226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 11666029 - 11665964
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 66  Q
    |||||||||||||||| ||| | ||| ||||||||||| | || ||||||| |||| |||||||||    
T  11666029 gacacgtgtcgtgtctaacatcaacacgacaccgacacatataattacactaaattgtgtgatttt 11665964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 3865732 - 3865692
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgatttttt 68  Q
    |||||||||||||||| ||| |||||||||||||| |||||    
T  3865732 gacaccgacacttgtaattatactgaattatgtgagttttt 3865692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 5339161 - 5339077
Alignment:
Q  33 cgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcata 117  Q
    ||||||||||  ||||| | |||||||||||||| | |||| ||||    |||||||||||| || |||||||| ||||||||||    
T  5339161 cgacacttgtttttacattaaattatgtgattttctcaaattattaacaatgtcggcgtgtctgtatccgtattcgtgcttcata 5339077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 28 - 100
Target Start/End: Complemental strand, 25093560 - 25093488
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||||||| | || |||||||||||| ||||||||| | |||| ||||   |||||||||||| ||||||    
T  25093560 gacaccgacacatataattacactgaattgtgtgattttctcaaatcattaacagtgtcggcgtgttagtgtc 25093488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 28 - 100
Target Start/End: Complemental strand, 33359819 - 33359747
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||| |||||||||| ||||||| || |||||||  |||| |||| ||||  |||||| |||||||||||||    
T  33359819 gacactgacacttgtatttacactaaaatatgtgaccttttcaaattattagctgtgtcagcgtgtcagtgtc 33359747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 40993336 - 40993376
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgatttttt 68  Q
    ||||||||||| | || ||||||||||||||||||||||||    
T  40993336 gacaccgacacatataattacactgaattatgtgatttttt 40993376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 7e-29; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 24339724 - 24339627
Alignment:
Q  4 acgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 101  Q
    |||||||||||| |||||||||| |||||||||||||||| |||||||||||||||||||||||| |||| ||||  ||||||||||||||| |||||    
T  24339724 acgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcaatgtcc 24339627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 6 - 99
Target Start/End: Complemental strand, 7438786 - 7438693
Alignment:
Q  6 gtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 99  Q
    ||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||| |||| ||||  ||||||||| |||||||||    
T  7438786 gtgtcgtgtttgacaccgacatgacaccgacacttgtaattacattgaattatgtgattttttcaaattattaactgtgtcggcatgtcagtgt 7438693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 9 - 100
Target Start/End: Original strand, 9408316 - 9408407
Alignment:
Q  9 tcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    |||||||||||||||| | |||||||||||||||| ||||||| |||||||||||||||| |||| |||| ||||||||| |||||||||||    
T  9408316 tcgtgtctgacaccgatacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaattgtgtcggtgtgtcagtgtc 9408407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 11665414 - 11665508
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtca 95  Q
    ||||||||||||||  ||||||||||||||| |||||||| || ||| |||||||||||||||||||| |||| |||| ||||||| ||||||||    
T  11665414 gacacgtgtcgtgttcgacaccgacatgacatcgacacttataattagactgaattatgtgattttttcaaattattagttgtgtcagcgtgtca 11665508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 26033435 - 26033512
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataatta 78  Q
    |||||||||| ||||||||||||||| || ||||||||||||| |||||||||||||||||||||||| |||| ||||    
T  26033435 gacacgtgtcatgtctgacaccgacacgagaccgacacttgtaattacactgaattatgtgattttttcaaattatta 26033512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 23 - 103
Target Start/End: Complemental strand, 27945104 - 27945024
Alignment:
Q  23 gacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||| |||||||||||||||| |||||||||||||||| ||||| | |||| |||| | ||||||||||||||||||||||    
T  27945104 gacacgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtccgt 27945024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 10 - 98
Target Start/End: Original strand, 11272569 - 11272659
Alignment:
Q  10 cgtgtctgacaccgacatgacaccgacacttgtagttacactgaat--tatgtgattttttaaaataattatttgtgtcggcgtgtcagtg 98  Q
    |||||| |||||||||| |||||||||||||||| |||||||||||  ||||||||||||| |||| || | |||||||||||| ||||||    
T  11272569 cgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatatgtgattttttcaaattatcagttgtgtcggcgtctcagtg 11272659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 43027449 - 43027545
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    |||||||||||||||||||||      |||||||||||||||| |||||||| ||||||||||||||| |||| ||||  || |||| ||||||||||||    
T  43027449 gacacgtgtcgtgtctgacac------gacaccgacacttgtatttacactgcattatgtgattttttcaaattattagctgggtcgccgtgtcagtgtc 43027542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 21 - 103
Target Start/End: Complemental strand, 13770756 - 13770674
Alignment:
Q  21 ccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||| |||| ||||||||||| |||||||||||||||| ||||||| |||| ||||  ||||||||||| |||||||||||    
T  13770756 ccgacacgacaacgacacttgtaattacactgaattatgtaatttttttaaattattagctgtgtcggcgtatcagtgtccgt 13770674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 25481960 - 25481887
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 101  Q
    |||||| ||||||||| |||||||||||||||||||||||| |||| ||||  ||||||||||||||| |||||    
T  25481960 gacaccaacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtcc 25481887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 25822740 - 25822647
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtc 94  Q
    ||||||||||||||| || ||||| | |||||||||||||||| |||||||||||| ||   |||||| |||| |||| |||||||||||||||    
T  25822740 gacacgtgtcgtgtccgataccgatacgacaccgacacttgtaattacactgaattgtgattttttttcaaattattagttgtgtcggcgtgtc 25822647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 21 - 101
Target Start/End: Original strand, 5409830 - 5409910
Alignment:
Q  21 ccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 101  Q
    |||||| |||||||||||||||| || ||||||||||||||||||||| |||| ||||  ||| || ||||||||||||||    
T  5409830 ccgacacgacaccgacacttgtaattgcactgaattatgtgattttttcaaattattagctgtatcagcgtgtcagtgtcc 5409910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 11061076 - 11061152
Alignment:
Q  27 tgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    ||||||||||||||||| ||| ||| |||||||||||||||| |||| ||||  |||||||| ||||||||||||||    
T  11061076 tgacaccgacacttgtaattatactaaattatgtgattttttcaaattattagctgtgtcggtgtgtcagtgtccgt 11061152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 21560580 - 21560521
Alignment:
Q  9 tcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 68  Q
    |||||| ||||||||| | |||||||||||||||| ||||||||||||||||||||||||    
T  21560580 tcgtgtttgacaccgatacgacaccgacacttgtaattacactgaattatgtgatttttt 21560521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 26329356 - 26329455
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    |||||||||||||||||||||||||| ||| ||||||| | || |||||||||||| |||| |||| | |||| ||||    ||||||||||||||||||    
T  26329356 gacacgtgtcgtgtctgacaccgacacgacgccgacacatataattacactgaattgtgtgtttttctcaaattattaacgatgtcggcgtgtcagtgtc 26329455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 32308205 - 32308079
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    |||| ||||||||||  ||||||||| ||||| ||||| |  | |||||||||||||||||||||| | |||| ||||   |||||||||||||||||||    
T  32308205 gacatgtgtcgtgtccaacaccgacacgacactgacacatacaattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtc 32308106  T
Q  101 ------cgtatttgtgcttcataggtt 121  Q
          |||||||||||||||||||||    
T  32308105 catgttcgtatttgtgcttcataggtt 32308079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 15902902 - 15902808
Alignment:
Q  6 gtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    |||||||||| || |||||||  |||||||||| | || ||||||| |||||||||||||| | |||| |||||| |||||||| ||||||||||    
T  15902902 gtgtcgtgtccgataccgacacaacaccgacacatataattacactaaattatgtgattttatcaaattattattggtgtcggcatgtcagtgtc 15902808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 18039067 - 18039017
Alignment:
Q  18 acaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 68  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  18039067 acaccgacacgacaccgacacttgtaattacactgaattatgtgatttttt 18039017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 3991382 - 3991322
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcgg 88  Q
    |||||||||||||||| ||| |||||||||||||||||||| |||| |||| |||||||||    
T  3991382 gacaccgacacttgtaattatactgaattatgtgattttttcaaattattagttgtgtcgg 3991322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 23 - 103
Target Start/End: Original strand, 18215182 - 18215262
Alignment:
Q  23 gacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||| ||||||||||||||||  ||||||| ||||||||||||||| |||| ||||  || |||||||||| |||||||||    
T  18215182 gacacgacaccgacacttgtaactacactgcattatgtgattttttcaaattattagctgcgtcggcgtgttagtgtccgt 18215262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 2334334 - 2334268
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 68  Q
    |||| |||||||||| ||||| |||| |||||||||||||||| ||||||| ||||||||||||||||    
T  2334334 gacatgtgtcgtgtccgacac-gacacgacaccgacacttgtaattacactaaattatgtgatttttt 2334268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 24105732 - 24105661
Alignment:
Q  32 ccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||||| ||||||||||| |||  ||||||| |||| ||||  |||||||||||||||||||||||    
T  24105732 ccgacacttgtaattacactgaatcatgcaattttttcaaattattagctgtgtcggcgtgtcagtgtccgt 24105661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 19213861 - 19213811
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataatta 78  Q
    |||||||||||||||| |||||||| |||||||||||||||||||| ||||    
T  19213861 gacaccgacacttgtatttacactgcattatgtgattttttaaaattatta 19213811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 117
Target Start/End: Complemental strand, 23191955 - 23191865
Alignment:
Q  27 tgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcata 117  Q
    |||||| || || |||| |||||||||| ||||||||||| | |||| ||||   |||||||||| ||||||||||||| |||||||||||    
T  23191955 tgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcggtgtcggcgtatcagtgtccgtatatgtgcttcata 23191865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 6630888 - 6630985
Alignment:
Q  3 cacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||| ||||| |||||| ||| |||| |||||| | || ||||||||||||| |||| ||| | |||| |||| | |||||||||||||||||||    
T  6630888 cacgtgttgtgtccgacaccaacacgacatcgacacatataattacactgaattaagtgactttctcaaattattagtggtgtcggcgtgtcagtgtc 6630985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 13300479 - 13300418
Alignment:
Q  17 gacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataatta 78  Q
    ||||||||||||||||||| ||| ||| |||||||||||||| ||||||||| |||| ||||    
T  13300479 gacaccgacatgacaccgagactggtaattacactgaattatatgattttttcaaattatta 13300418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 15680867 - 15680794
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 101  Q
    ||||||||||||| || ||||||| ||||||||||||||||  ||| ||||  | |||||||||||||||||||    
T  15680867 gacaccgacacttataattacactaaattatgtgattttttttaattattagctatgtcggcgtgtcagtgtcc 15680794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 100
Target Start/End: Original strand, 7197298 - 7197370
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    |||||||||||||||| ||||| |||||||  ||||||||| |||| ||||  ||||||||||||||| ||||    
T  7197298 gacaccgacacttgtaattacattgaattaaatgatttttttaaattattagctgtgtcggcgtgtcaatgtc 7197370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 100
Target Start/End: Complemental strand, 8234204 - 8234132
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||| ||||||||  ||||||||||||||| ||||||| |||| |||| ||||||||| ||||| |||||    
T  8234204 gacaccggcacttgtaactacactgaattatgttattttttcaaattattagttgtgtcggtgtgtctgtgtc 8234132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 9778565 - 9778513
Alignment:
Q  21 ccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaat 73  Q
    |||||| |||||||||||||||| ||| |||||||||||||||||||| ||||    
T  9778565 ccgacacgacaccgacacttgtaattatactgaattatgtgattttttcaaat 9778513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 18213034 - 18213110
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgatttt-ttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    ||||||||||| | || ||||||| |||||||||||||| | |||| ||||| |||||||||||| |||||||||||    
T  18213034 gacaccgacacatataattacactaaattatgtgattttctaaaaaaaattagttgtgtcggcgtatcagtgtccgt 18213110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 98
Target Start/End: Original strand, 22602705 - 22602781
Alignment:
Q  22 cgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtg 98  Q
    ||||| ||||||||||| | || |||||||||||||||||||||| | ||||||||    |||||||||||||||||    
T  22602705 cgacacgacaccgacacatataattacactgaattatgtgattttctcaaataatttacggtgtcggcgtgtcagtg 22602781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 33994271 - 33994199
Alignment:
Q  27 tgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 99  Q
    ||||||||||||||||| || |||||||||||||||  |||| |||| | || ||| ||||||||||||||||    
T  33994271 tgacaccgacacttgtaattgcactgaattatgtgaccttttcaaattagtagttgcgtcggcgtgtcagtgt 33994199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 32094014 - 32094061
Alignment:
Q  21 ccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 68  Q
    |||||| |||||||||| ||||| ||||||||||||||||||||||||    
T  32094014 ccgacacgacaccgacatttgtaattacactgaattatgtgatttttt 32094061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 35862022 - 35861951
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 99  Q
    ||||| |||||||  | ||||| |||||||||||||||||| |||| |||| |||||||||||||| |||||    
T  35862022 gacacagacacttacaattacattgaattatgtgattttttcaaattattagttgtgtcggcgtgttagtgt 35861951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 33 - 103
Target Start/End: Complemental strand, 43250046 - 43249976
Alignment:
Q  33 cgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||| || |||||||| ||||||| ||||| | |||| |||||  ||||||||||||||||||||||    
T  43250046 cgacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgt 43249976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 36 - 100
Target Start/End: Original strand, 13557750 - 13557817
Alignment:
Q  36 cacttgtagttacactgaattatgtga---ttttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    |||||||| ||||||||||||||||||   |||||| |||| |||| || ||||||||||||||||||    
T  13557750 cacttgtaattacactgaattatgtgattttttttttaaattattagttttgtcggcgtgtcagtgtc 13557817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 28 - 121
Target Start/End: Complemental strand, 28155628 - 28155535
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcataggtt 121  Q
    |||||||||||||||| |||||| ||||||||| ||||| | |||| ||||   ||||||||||||  | ||| ||||  ||||||||||||||    
T  28155628 gacaccgacacttgtaattacaccgaattatgtaattttctcaaattattagcggtgtcggcgtgttcgagtcagtatccgtgcttcataggtt 28155535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 3520327 - 3520415
Alignment:
Q  12 tgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||||||| ||||| ||||||||| | || ||||| |||||||| ||||||| | |||| |||||  ||||| |||||||| ||||    
T  3520327 tgtctgacaccaacatgtcaccgacacatataattacattgaattatatgattttctcaaatgattatcggtgtcagcgtgtcaatgtc 3520415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 27229286 - 27229350
Alignment:
Q  2 acacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 66  Q
    |||||| ||||||||||||  |||| |||||||| |||| || ||||||| ||||||||||||||    
T  27229286 acacgtatcgtgtctgacagtgacacgacaccgatacttataattacactaaattatgtgatttt 27229350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 31 - 99
Target Start/End: Original strand, 40287361 - 40287428
Alignment:
Q  31 accgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 99  Q
    ||||||||||||| |||||||||| ||| ||||||||| |||| |||  ||||||||||||||| ||||    
T  40287361 accgacacttgtaattacactgaa-tatatgattttttcaaattattcgttgtgtcggcgtgtccgtgt 40287428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 88
Target Start/End: Complemental strand, 1656717 - 1656674
Alignment:
Q  45 ttacactgaattatgtgattttttaaaataattatttgtgtcgg 88  Q
    |||||||||||||||||||||||||||| | ||| |||||||||    
T  1656717 ttacactgaattatgtgattttttaaaaaatttagttgtgtcgg 1656674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 22868083 - 22868028
Alignment:
Q  45 ttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    |||||||||||||||||||||| | | || |||| | |||||||||||||||||||    
T  22868083 ttacactgaattatgtgattttctcatattattagtggtgtcggcgtgtcagtgtc 22868028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 103
Target Start/End: Complemental strand, 26733362 - 26733287
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    ||||||||||| | || ||| |||||||||||||||||| | |||| ||||   |||||| |||||||||||||||    
T  26733362 gacaccgacacatttaattagactgaattatgtgattttgtcaaattattagcggtgtcgacgtgtcagtgtccgt 26733287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 28 - 66
Target Start/End: Complemental strand, 21880210 - 21880172
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgatttt 66  Q
    |||||||||||||||| |||||||||||||||| |||||    
T  21880210 gacaccgacacttgtaattacactgaattatgtaatttt 21880172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 45 - 99
Target Start/End: Complemental strand, 41020537 - 41020483
Alignment:
Q  45 ttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 99  Q
    ||||||| |||||||||||||||  |||| |||| |||||||| |||||||||||    
T  41020537 ttacactaaattatgtgatttttgtaaattattagttgtgtcgacgtgtcagtgt 41020483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 640172 - 640127
Alignment:
Q  27 tgacaccgacacttgtagttacactgaattatgtgattttttaaaa 72  Q
    |||||||||||| | || ||||||||||||||||||||| ||||||    
T  640172 tgacaccgacacatataattacactgaattatgtgatttgttaaaa 640127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 1885648 - 1885591
Alignment:
Q  11 gtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 68  Q
    ||||| |||||| ||| |||||||||||||||  ||||| |||||||||| |||||||    
T  1885648 gtgtccgacaccaacacgacaccgacacttgtgattacattgaattatgtcatttttt 1885591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 5835306 - 5835233
Alignment:
Q  27 tgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    |||||||||||| | || |||||||||||||||| ||||| | |||  |||| | |||||||||| ||||||||    
T  5835306 tgacaccgacacatataattacactgaattatgttattttctcaaactattagtggtgtcggcgtatcagtgtc 5835233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 7058490 - 7058429
Alignment:
Q  22 cgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgt 83  Q
    ||||| |||||| ||||||||| |||||||||||||  ||||||||| |||| |||| ||||    
T  7058490 cgacacgacaccaacacttgtaattacactgaattacatgattttttcaaattattagttgt 7058429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 103
Target Start/End: Complemental strand, 19206122 - 19206033
Alignment:
Q  14 tctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    ||||||||| ||| ||||||||||| | || ||| | |||||||||||||||| | |||| ||||   ||||||||||||  ||||||||    
T  19206122 tctgacaccaacaagacaccgacacatataattataatgaattatgtgattttctcaaattattagcggtgtcggcgtgttggtgtccgt 19206033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 21930713 - 21930609
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||| | |||||  |||| |||| |||| ||||||||||| ||| | |||||||| | ||||||| |||| ||||  || |||||||||||||||||    
T  21930713 gacacgtcttgtgtccaacactgacacgacatcgacacttgtaattaaaatgaattatctaatttttt-aaattattagctgagtcggcgtgtcagtgtc 21930615  T
Q  101 cgtatt 106  Q
    | ||||    
T  21930614 catatt 21930609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 22484084 - 22484011
Alignment:
Q  27 tgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    |||||||||||| | || ||| |||||||||||  ||||| |||||| ||||   |||||||||||||||||||    
T  22484084 tgacaccgacacatataattatactgaattatgcaattttctaaaattattagcggtgtcggcgtgtcagtgtc 22484011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 37742599 - 37742506
Alignment:
Q  10 cgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||| |||||||| ||||||||||||| | |  ||||| ||||| |||  ||||| | |||| |||| | ||||||||||| ||||||||||    
T  37742599 cgtgtccgacaccgatatgacaccgacacatattattacattgaatcatgaaattttgttaaattattagtggtgtcggcgtggcagtgtccgt 37742506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 48438605 - 48438564
Alignment:
Q  27 tgacaccgacacttgtagttacactgaattatgtgatttttt 68  Q
    |||||||||||| |||| ||||| ||||||||||||||||||    
T  48438605 tgacaccgacacgtgtaattacattgaattatgtgatttttt 48438564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 4794971 - 4794915
Alignment:
Q  4 acgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgt 60  Q
    |||||||||||| |||||||| | |  |||||||||| || ||||||||||||||||    
T  4794971 acgtgtcgtgtccgacaccgatacggtaccgacacttataattacactgaattatgt 4794915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 103
Target Start/End: Original strand, 18013070 - 18013150
Alignment:
Q  23 gacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||| ||||| ||||| | || |||||||||||||||| ||||||| |||| |||| | ||||| |  |||||||||||||    
T  18013070 gacacgacactgacacatataattacactgaattatgtaatttttttaaattattagtagtgtcagaatgtcagtgtccgt 18013150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 28 - 100
Target Start/End: Complemental strand, 21826331 - 21826259
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||||||| | |  ||| ||||| |||||||||||||| |||| |||| | |||||||||||| ||||||    
T  21826331 gacaccgacacatattattagactgagttatgtgatttttttaaattattagtcgtgtcggcgtgttagtgtc 21826259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 7e-29; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 24613675 - 24613768
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtc 94  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| | |||| |||| |||||||| ||||||    
T  24613675 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtacttacattgaattatgtgattttctcaaattattagttgtgtcgacgtgtc 24613768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 19482753 - 19482654
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    |||||||||||||||  | ||||||| |||||| ||||||||| |||||| |||||||||||| |||| |||| |||| |||||||||||||||||||||    
T  19482753 gacacgtgtcgtgtccaataccgacacgacaccaacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtc 19482654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 6 - 116
Target Start/End: Complemental strand, 4383447 - 4383338
Alignment:
Q  6 gtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtat 105  Q
    ||||||||| ||||||||||| ||||| |||| ||||| ||||||||||||||||||| |||| |||| |||| |||| ||| |||||||||||||||||    
T  4383447 gtgtcgtgtttgacaccgacacgacactgacatttgtaattacactgaattatgtgat-ttttcaaattattagttgtatcgacgtgtcagtgtccgtat 4383349  T
Q  106 ttgtgcttcat 116  Q
      |||||||||    
T  4383348 ccgtgcttcat 4383338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 22234864 - 22234984
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttttta-aaataattatttgtgtcggcgtgtcagtgt 99  Q
    ||||||||||||||| |||||||||| ||||||||||| |  | ||||||||||||||||||||||||  ||||  |||   ||||||||||||| ||||    
T  22234864 gacacgtgtcgtgtcagacaccgacacgacaccgacacatagaattacactgaattatgtgatttttttcaaatttttagcggtgtcggcgtgtccgtgt 22234963  T
Q  100 ccgtatttgtgcttcataggt 120  Q
    ||||||  |||||||||||||    
T  22234964 ccgtatccgtgcttcataggt 22234984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 30982852 - 30982917
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 66  Q
    |||||||||||||||||||||||||| ||||||||||||| || |||||||||| |||||||||||    
T  30982852 gacacgtgtcgtgtctgacaccgacacgacaccgacacttataattacactgaaatatgtgatttt 30982917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 23292987 - 23293062
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||||||||| ||| |||||||||||||||||||| |||| ||||  ||||||||||||||| |||||||    
T  23292987 gacaccgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgt 23293062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 5414146 - 5414248
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||||||||||| ||||| |||| |||||||| || | || |||||||| ||| ||||||||| ||||| |||||  |||||||||||||| |||||    
T  5414146 gacacgtgtcgtgtccgacactgacacgacaccgatacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtccgtgtc 5414245  T
Q  101 cgt 103  Q
    |||    
T  5414246 cgt 5414248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 35 - 105
Target Start/End: Original strand, 11651142 - 11651212
Alignment:
Q  35 acacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtat 105  Q
    |||||||||||| ||||||||||||||||||||| |||| ||||  ||||||| |||||||||||||||||    
T  11651142 acacttgtagttgcactgaattatgtgatttttttaaattattagctgtgtcgacgtgtcagtgtccgtat 11651212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 27706154 - 27706251
Alignment:
Q  4 acgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 101  Q
    |||||||||||| ||||   ||| |||||  ||||||||| ||||||| |||||||||||||||| |||| |||| |||||||| |||||||||||||    
T  27706154 acgtgtcgtgtccgacattaacacgacactcacacttgtaattacactaaattatgtgatttttttaaattattaattgtgtcgacgtgtcagtgtcc 27706251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 28 - 100
Target Start/End: Complemental strand, 21945561 - 21945489
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    |||||||||||||||| |||||||||||||||| ||||||| |||| ||||  ||||||||| ||||||||||    
T  21945561 gacaccgacacttgtaattacactgaattatgtcattttttcaaattattagctgtgtcggcatgtcagtgtc 21945489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 28 - 103
Target Start/End: Complemental strand, 30299005 - 30298929
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtga-ttttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||||||||| |||||||||||||||| | |||||| |||| ||||  |||||||||||||||||||||||    
T  30299005 gacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtccgt 30298929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 28 - 103
Target Start/End: Complemental strand, 30327873 - 30327797
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtga-ttttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||||||||| |||||||||||||||| | |||||| |||| ||||  |||||||||||||||||||||||    
T  30327873 gacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtccgt 30327797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 12797339 - 12797413
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||||||||| |||||||||||||||||| ||||| |||| |||| || || ||||||||||||||||||    
T  12797339 gacaccgacacttgtaattacactgaattatgtga-tttttcaaattattagttttgccggcgtgtcagtgtccgt 12797413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 95
Target Start/End: Original strand, 12895275 - 12895342
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtca 95  Q
    ||||||||||||| || ||||||  |||||||||||||||| |||| |||||||||||||||||||||    
T  12895275 gacaccgacacttataattacacaaaattatgtgattttttcaaattattatttgtgtcggcgtgtca 12895342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 35157986 - 35158061
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    ||||||||||||| || ||||||| |||||||||||||||  |||| |||| ||| ||||||||||||||||||||    
T  35157986 gacaccgacacttataattacactaaattatgtgatttttccaaattattagttgcgtcggcgtgtcagtgtccgt 35158061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 16303267 - 16303344
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtat 105  Q
    |||||||||||||||| ||||||| |||||| | ||||||| |||  ||||| | |||||||||||||||||||||||    
T  16303267 gacaccgacacttgtaattacactaaattatatcattttttcaaaatattatctttgtcggcgtgtcagtgtccgtat 16303344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 100
Target Start/End: Original strand, 3947760 - 3947839
Alignment:
Q  21 ccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    |||||| ||||| |||||||||| ||||||||||||||| |||||||| |||| ||||  ||||||||| |||| |||||    
T  3947760 ccgacacgacactgacacttgtaattacactgaattatgcgattttttcaaattattagctgtgtcggcatgtccgtgtc 3947839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 49431084 - 49431009
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgatt-ttttaaaataattatttgtgtcggcgtgtcagtgtccg 102  Q
    ||||||||||||| || |||||||||||||||||||| |||| |||| ||||  ||||||||||||||| ||||||    
T  49431084 gacaccgacacttttaattacactgaattatgtgatttttttcaaattattagctgtgtcggcgtgtcactgtccg 49431009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 91
Target Start/End: Original strand, 54580024 - 54580087
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgt 91  Q
    ||||||||||||| || |||||||||||||||||||||||| |||| |||| ||||||| ||||    
T  54580024 gacaccgacacttataattacactgaattatgtgattttttcaaattattagttgtgtcagcgt 54580087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 6485613 - 6485687
Alignment:
Q  29 acaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    ||||||||||||||| ||||||| |||||||||||||||| |||| |||| || |||| ||||||  ||||||||    
T  6485613 acaccgacacttgtaattacactaaattatgtgattttttcaaattattaattttgtctgcgtgtaggtgtccgt 6485687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 100
Target Start/End: Complemental strand, 12708210 - 12708132
Alignment:
Q  23 gacatgacaccgacacttgtagttacactgaattatgtgatttttt-aaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    |||| |||| ||||||||||| |||||||||||||| | ||||||| ||||| |||| ||||||| |||||||||||||    
T  12708210 gacacgacatcgacacttgtaattacactgaattatttcattttttaaaaattattagttgtgtctgcgtgtcagtgtc 12708132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 103
Target Start/End: Original strand, 12895110 - 12895191
Alignment:
Q  21 ccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||| |||||||||||||||| ||||  |||||||||||||||||| |||| ||||  ||| |||||||||| ||||||||    
T  12895110 ccgacacgacaccgacacttgtaattactttgaattatgtgattttttcaaattattagctgtttcggcgtgtc-gtgtccgt 12895191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 47264071 - 47264005
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttt 67  Q
    |||| ||||||| ||||||||| |||||||| ||||| ||||| |||||| ||||||||||||||||    
T  47264071 gacatgtgtcgtatctgacaccaacatgacatcgacatttgtaattacacagaattatgtgattttt 47264005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 23 - 100
Target Start/End: Original strand, 11596348 - 11596425
Alignment:
Q  23 gacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    |||| |||||| ||||||||| |||||||||||||||||||||||| |||| ||||  | ||| ||||| ||||||||    
T  11596348 gacacgacacctacacttgtaattacactgaattatgtgattttttcaaattattagctttgttggcgtatcagtgtc 11596425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 16073452 - 16073380
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 101  Q
    |||||||||||||||| ||||||||||||||| || ||||| |||| |||| |||||| |||||||||| ||||    
T  16073452 gacaccgacacttgtaattacactgaattatgcga-tttttcaaattattacttgtgttggcgtgtcagagtcc 16073380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 29205501 - 29205452
Alignment:
Q  29 acaccgacacttgtagttacactgaattatgtgattttttaaaataatta 78  Q
    ||||||||||||||| |||||||||||||||||||||||| |||| ||||    
T  29205501 acaccgacacttgtaattacactgaattatgtgattttttcaaattatta 29205452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 35 - 100
Target Start/End: Complemental strand, 40481687 - 40481623
Alignment:
Q  35 acacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||||| ||||||||||||||||||| |||| |||| |||| |||| ||||||||||||||||    
T  40481687 acacttgtaattacactgaattatgtgat-ttttcaaattattagttgtatcggcgtgtcagtgtc 40481623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 28000738 - 28000794
Alignment:
Q  23 gacatgacaccgacacttgtagttacactgaattatgtgatt-ttttaaaataatta 78  Q
    ||||||||||||||||||||| |||||||||||||| ||||| ||||||||| ||||    
T  28000738 gacatgacaccgacacttgtaattacactgaattatatgattattttaaaattatta 28000794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 42640587 - 42640547
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgatttttt 68  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  42640587 gacaccgacacttgtaattacactgaattatgtgatttttt 42640547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 848036 - 847937
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||| ||||||| |||||| ||| |||||||||||||||| ||| | |||||||||| ||||| | |||| ||||   |  ||||||||||||||||    
T  848036 gacacgtttcgtgtccgacaccaacaagacaccgacacttgtaattatagtgaattatgtaattttctcaaattattagcggcatcggcgtgtcagtgtc 847937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 19312420 - 19312353
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 68  Q
    |||||||||||| || |||| ||||| |||||||| |||| || ||||||||||| ||||||||||||    
T  19312420 gacacgtgtcgtatccgacaacgacacgacaccgatacttataattacactgaatcatgtgatttttt 19312353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 24544038 - 24543967
Alignment:
Q  30 caccgacacttgtagttacactgaattatgtg-attttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    |||||||||||||| ||||| || |||| ||| ||||||| |||| |||| |||||||||||||||||||||    
T  24544038 caccgacacttgtaattacaatgcattaagtgtatttttttaaattattagttgtgtcggcgtgtcagtgtc 24543967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 28084589 - 28084511
Alignment:
Q  19 caccgacatgacaccgacacttgtagttacactgaattatgtgatt-ttttaaaataattatttgtgtcggcgtgtcag 96  Q
    |||||||| ||||| |||||||||| ||||| |||||||||||||| |||| ||||  |||  ||||||||||||||||    
T  28084589 caccgacacgacacagacacttgtaattacattgaattatgtgatttttttcaaattcttagctgtgtcggcgtgtcag 28084511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 28964249 - 28964299
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataatta 78  Q
    ||||| |||||||||| |||||||||||||||||||||||| |||| ||||    
T  28964249 gacacagacacttgtaattacactgaattatgtgattttttcaaattatta 28964299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 106
Target Start/End: Original strand, 34306805 - 34306882
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatt 106  Q
    |||||||||||||||| |||||||  ||||| ||| ||||| |||| |||| |||||||||||| |||||||| |||||    
T  34306805 gacaccgacacttgtaattacactacattatctga-tttttcaaattattagttgtgtcggcgtatcagtgtctgtatt 34306882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 51701340 - 51701266
Alignment:
Q  4 acgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataatta 78  Q
    |||||||||||  |||||||||| |||||  ||||||||| ||||||| |||||||| ||||||| |||| ||||    
T  51701340 acgtgtcgtgttcgacaccgacacgacactaacacttgtaattacactcaattatgtaattttttcaaattatta 51701266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 45 - 102
Target Start/End: Complemental strand, 36635365 - 36635308
Alignment:
Q  45 ttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccg 102  Q
    |||||||||||||||||||||| | |||| |||| | |||| ||||||||||||||||    
T  36635365 ttacactgaattatgtgattttctcaaattattagtggtgttggcgtgtcagtgtccg 36635308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 40742667 - 40742574
Alignment:
Q  10 cgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    ||||||||||||||||| |||| |||||| | || |||||||  ||||| ||||||| | |||| |||| | |||||||||| ||| |||||||    
T  40742667 cgtgtctgacaccgacacgacatcgacacatataattacactagattatatgattttctcaaattattaatggtgtcggcgtttcaatgtccgt 40742574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 46083965 - 46084081
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||||||||||| || || |||| ||||||||||| | || |||||||  ||||||||||||  ||||| |||||  |||||| | ||||| |||||    
T  46083965 gacacgtgtcgtgtccgatactgacacgacaccgacacatataattacactagattatgtgatttactaaaacaattagctgtgtccg-gtgtccgtgtc 46084063  T
Q  101 cgtatttgtgcttcatag 118  Q
    |||||   ||||||||||    
T  46084064 cgtatccatgcttcatag 46084081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 715608 - 715648
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgatttttt 68  Q
    |||||| ||||||||| ||||||||||||||||||||||||    
T  715608 gacaccaacacttgtaattacactgaattatgtgatttttt 715648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 752934 - 752974
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgatttttt 68  Q
    |||||| ||||||||| ||||||||||||||||||||||||    
T  752934 gacaccaacacttgtaattacactgaattatgtgatttttt 752974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 100
Target Start/End: Original strand, 2361976 - 2362048
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||||||||| || ||||||| |||||||| ||||||| |||| ||||  |||||||| |||||| ||||    
T  2361976 gacaccgacacttttaattacactaaattatgtaattttttcaaattattagctgtgtcggtgtgtcaatgtc 2362048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 37496789 - 37496665
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcag---- 96  Q
    |||| |||||||||| | || |||||  ||||||||||||||  ||||| |||||||||| ||||| | ||| ||||||  |||||  ||||||||        
T  37496789 gacatgtgtcgtgtccggcaacgacacaacaccgacacttgtgattacattgaattatgtcattttctcaaaaaattatcggtgtcaacgtgtcagtgtc 37496690  T
Q  97 -tgtccgtatttgtgcttcataggt 120  Q
     ||||||| ||||||||||||||||    
T  37496689 gtgtccgtgtttgtgcttcataggt 37496665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 6879466 - 6879505
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttt 67  Q
    |||||||||||||||| ||||||| |||||||||||||||    
T  6879466 gacaccgacacttgtaattacacttaattatgtgattttt 6879505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 40179637 - 40179712
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    ||||||||| | | || |||||||||||||||||||||||| |||  |||| | |||||  |||||||||||||||    
T  40179637 gacaccgacgcatataattacactgaattatgtgattttttcaaactattaatggtgtcaacgtgtcagtgtccgt 40179712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 15029844 - 15029751
Alignment:
Q  6 gtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||| |||||||| |||||  |||||| |||| | || ||||||||||||||||||| |||| |||| ||||   ||||| |||||||||||||    
T  15029844 gtgtcatgtctgacgccgacc-gacaccaacacatataattacactgaattatgtgatattttcaaattattagcagtgtctgcgtgtcagtgtc 15029751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 20743296 - 20743350
Alignment:
Q  45 ttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 99  Q
    |||||||||||||||| ||||| | |||| |||||  ||||||||||||||||||    
T  20743296 ttacactgaattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgt 20743350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 28 - 94
Target Start/End: Original strand, 38847013 - 38847079
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtc 94  Q
    ||||| |||||||||| ||||||||||| || ||||||||| |||| ||||  |||||||| |||||    
T  38847013 gacactgacacttgtaattacactgaataatatgattttttcaaattattagctgtgtcggagtgtc 38847079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 5775353 - 5775418
Alignment:
Q  22 cgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcg 87  Q
    ||||||||||||||||| | || ||||||| |||||||||||||| | |||| |||| | ||||||    
T  5775353 cgacatgacaccgacacatataattacacttaattatgtgattttctcaaattattaatggtgtcg 5775418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 100
Target Start/End: Complemental strand, 50280947 - 50280867
Alignment:
Q  22 cgacatgacaccgacacttgtagttacac--tgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||| ||||||| |||||||| ||||||  | |||||||||| ||||| |||| ||||  |||||||||||||| |||||    
T  50280947 cgacacgacaccggcacttgtaattacacacttaattatgtgaatttttcaaattattagctgtgtcggcgtgtccgtgtc 50280867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 47 - 103
Target Start/End: Complemental strand, 7012105 - 7012049
Alignment:
Q  47 acactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||||||| ||||| | |||| |||||  ||||||||||||| ||||||||    
T  7012105 acactgaattatgtcattttctcaaattattatcggtgtcggcgtgtcggtgtccgt 7012049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 11931346 - 11931298
Alignment:
Q  20 accgacatgacaccgacacttgtagttacactgaattatgtgatttttt 68  Q
    |||||||||||| |||||| | || ||||||| ||||||||||||||||    
T  11931346 accgacatgacatcgacacatatatttacactaaattatgtgatttttt 11931298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 20521873 - 20521925
Alignment:
Q  51 tgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||||||||| | |||| |||||  || |||||||||||||||||||    
T  20521873 tgaattatgtgattttatcaaattattatcggtatcggcgtgtcagtgtccgt 20521925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 42 - 78
Target Start/End: Original strand, 30522930 - 30522966
Alignment:
Q  42 tagttacactgaattatgtgattttttaaaataatta 78  Q
    ||||||||||||||||||||||||| | |||||||||    
T  30522930 tagttacactgaattatgtgattttctcaaataatta 30522966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 31 - 99
Target Start/End: Original strand, 31800482 - 31800550
Alignment:
Q  31 accgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 99  Q
    ||||||||||||| ||||| | |||||| | |||||||||||| ||||  |||||||| ||||| ||||    
T  31800482 accgacacttgtaattacattaaattatttaattttttaaaattattagctgtgtcggtgtgtcggtgt 31800550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 3e-28; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 15816107 - 15816207
Alignment:
Q  5 cgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgta 104  Q
    ||||||||||| |||||| ||| ||||||||||||| || ||||||| |||||||||||||||| |||| |||| |||||||||||||||||||||||||    
T  15816107 cgtgtcgtgtccgacaccaacacgacaccgacacttataattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgta 15816206  T
Q  105 t 105  Q
    |    
T  15816207 t 15816207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 22652061 - 22651959
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||| ||||||||| |||||||||| |||||||||||||||| ||| | |||||||||||||||||| |||| ||||  ||||||||||||||||||||    
T  22652061 gacacatgtcgtgtccgacaccgacacgacaccgacacttgtaattatattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 22651962  T
Q  101 cgt 103  Q
    |||    
T  22651961 cgt 22651959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 29447084 - 29447177
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtc 94  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| | |||| |||| |||||||| ||||||    
T  29447084 gacacatgtcgtgtccgacaccgacatgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagttgtgtcgacgtgtc 29447177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 29510278 - 29510380
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    |||||| |||||||| ||||||||||  ||||||||||||||| ||| |||||||| ||||||||||| |||| ||||  ||||||||||||||||||||    
T  29510278 gacacgcgtcgtgtccgacaccgacactacaccgacacttgtaattatactgaattttgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 29510377  T
Q  101 cgt 103  Q
    |||    
T  29510378 cgt 29510380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 2572030 - 2572132
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||||||||||| ||||| |||| |||||||||||||||| ||||||| |||||||||||||||| |||| ||||  ||||||| |||||| || ||    
T  2572030 gacacgtgtcgtgtccgacacagacacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaggtgtgtcgacgtgtcggtatc 2572129  T
Q  101 cgt 103  Q
    |||    
T  2572130 cgt 2572132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 28 - 103
Target Start/End: Complemental strand, 20873127 - 20873052
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||||||||| ||||||| |||||||||||||||| |||| ||||| | |||||||||||||||||||||    
T  20873127 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattatctatgtcggcgtgtcagtgtccgt 20873052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 36450755 - 36450830
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||| ||||||||| |||||||||||| ||||||||||| |||| |||| ||||||||||||||||||||||||    
T  36450755 gacacctacacttgtaattacactgaattctgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgt 36450830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 13436954 - 13437038
Alignment:
Q  17 gacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 101  Q
    |||||||||| |||||||||||||||  ||||  |||||||||||||||||| |||| ||||  |||||||||||||||||||||    
T  13436954 gacaccgacacgacaccgacacttgttattaccatgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtcc 13437038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 35 - 105
Target Start/End: Original strand, 41838131 - 41838201
Alignment:
Q  35 acacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtat 105  Q
    |||||||||||| ||||||||||||||||||||| |||| ||||  ||||||| |||||||||||||||||    
T  41838131 acacttgtagttgcactgaattatgtgatttttttaaattattagctgtgtcgacgtgtcagtgtccgtat 41838201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 4673406 - 4673498
Alignment:
Q  8 gtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    |||||||| |||| | ||| ||||| || ||||||| |||||||||||| | ||||||||| |||| ||||| ||||||||||||||||||||    
T  4673406 gtcgtgtccgacatcaacaagacactgatacttgtaattacactgaattttatgattttttcaaattattatctgtgtcggcgtgtcagtgtc 4673498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 18170483 - 18170558
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||| ||||| ||||| |||||||||| ||||||| ||||  ||| ||||||||||||||||||||||||    
T  18170483 gacaccgacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccgt 18170558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 18634051 - 18634126
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||| ||||| ||||| |||||||||| ||||||| ||||  ||| ||||||||||||||||||||||||    
T  18634051 gacaccgacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccgt 18634126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 22596052 - 22595981
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 99  Q
    |||||| ||||||||| |||||||||||||||| ||||||| |||| ||||  |||||||||||||||||||    
T  22596052 gacaccaacacttgtaattacactgaattatgttatttttttaaattattagctgtgtcggcgtgtcagtgt 22595981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 102
Target Start/End: Original strand, 30271287 - 30271366
Alignment:
Q  23 gacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccg 102  Q
    |||| ||||| | |||||||| |||||||| ||||||||||||||| |||| ||||  ||||||||||||||||||||||    
T  30271287 gacacgacactggcacttgtaattacactgcattatgtgattttttcaaatgattagctgtgtcggcgtgtcagtgtccg 30271366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 41831946 - 41832012
Alignment:
Q  33 cgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 99  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||  ||||||||| |||| ||||    
T  41831946 cgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcggcatgtctgtgt 41832012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 5813650 - 5813573
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtat 105  Q
    |||||||||||||||| ||||||| || ||||||| ||||| |||| ||||  |||||||||||||| ||||||||||    
T  5813650 gacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtccgtat 5813573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 25566910 - 25566849
Alignment:
Q  17 gacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataatta 78  Q
    |||||| ||| |||||||||||||||| |||||||||||||||||||||||| |||| ||||    
T  25566910 gacaccaacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 25566849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 28745583 - 28745506
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataatta 78  Q
    |||| |||||||||| |||||||||| |||| ||||| ||||||||||| |||||||||||| ||||| |||| ||||    
T  28745583 gacaggtgtcgtgtccgacaccgacacgacatcgacatttgtagttacattgaattatgtgaatttttcaaattatta 28745506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 100
Target Start/End: Original strand, 4786339 - 4786411
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||||||| | || |||||||||||||||||||||| | |||| |||| | |||||||||||||||||||    
T  4786339 gacaccgacacatataattacactgaattatgtgattttcttaaattattaatggtgtcggcgtgtcagtgtc 4786411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 25192350 - 25192425
Alignment:
Q  30 caccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtat 105  Q
    ||||||||||| || ||| |||||||||||| | ||||| |||| ||||  |||||||||||||||||||||||||    
T  25192350 caccgacacttataattatactgaattatgtcactttttcaaattattagctgtgtcggcgtgtcagtgtccgtat 25192425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 98
Target Start/End: Complemental strand, 31557055 - 31556985
Alignment:
Q  27 tgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtg 98  Q
    ||||||||| ||||||| ||||||||||||||||||| |||| |||| ||||  ||||||||||||||||||    
T  31557055 tgacaccgaaacttgtaattacactgaattatgtgat-ttttcaaattattaactgtgtcggcgtgtcagtg 31556985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 93
Target Start/End: Original strand, 4298886 - 4298952
Alignment:
Q  27 tgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgt 93  Q
    ||||||||||||||||| ||||| | |||||||||||||||| |||| ||||  |||||||||||||    
T  4298886 tgacaccgacacttgtaattacattaaattatgtgattttttcaaattattaactgtgtcggcgtgt 4298952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 4948710 - 4948660
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataatta 78  Q
    |||||||||||||||| |||||||||||||||||||||||| |||| ||||    
T  4948710 gacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 4948660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 21465497 - 21465420
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataatta 78  Q
    ||||||||||||||| ||||| |||| |||||| ||||||||| |||||  ||||||| ||||||||| |||| ||||    
T  21465497 gacacgtgtcgtgtccgacactgacacgacaccaacacttgtaattacatcgaattatatgattttttcaaattatta 21465420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 10 - 103
Target Start/End: Original strand, 28384977 - 28385070
Alignment:
Q  10 cgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||||| |||||||||||||||| | || ||||||||||||||| ||||| || | || ||||   |||||||  |||||||||||||    
T  28384977 cgtgtctgacactgacatgacaccgacacatataattacactgaattatgagatttattcatattattaacggtgtcggtatgtcagtgtccgt 28385070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 11927066 - 11927150
Alignment:
Q  7 tgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgt 91  Q
    |||||||| ||||||| ||| ||||||||||| | || |||||||||||||||||||||| | |||| ||||   ||||||||||    
T  11927066 tgtcgtgtatgacaccaacacgacaccgacacatataattacactgaattatgtgattttatcaaattattaacagtgtcggcgt 11927150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 105
Target Start/End: Complemental strand, 14692528 - 14692441
Alignment:
Q  17 gacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtat 105  Q
    ||||| ||||||| |||||||| | ||||||||||||||||||| | ||| | |||| ||||| |||||| | ||||||||||||||||    
T  14692528 gacacagacatgataccgacacctatagttacactgaattatgtca-tttctcaaattattatctgtgtcagagtgtcagtgtccgtat 14692441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 22204700 - 22204620
Alignment:
Q  27 tgacaccgacacttgtagttacactgaattatgtg-at-tttttaaaataattatttgtgtcggcgtgtcagtgtccgtat 105  Q
    |||||| |||||||||| |||||||||||||| |  || ||||| |||| |||| ||||||||||||||||||||||||||    
T  22204700 tgacactgacacttgtaattacactgaattatatatatattttttaaattattagttgtgtcggcgtgtcagtgtccgtat 22204620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 8343401 - 8343302
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||||||||||| |||||    | ||||| |||||||||| ||||||| |||||||||||||||| |||| ||||  | |||||| ||||| |||||    
T  8343401 gacacgtgtcgtgtcggacacgtgtacgacactgacacttgtaattacactaaattatgtgattttttcaaattattagctatgtcggtgtgtcggtgtc 8343302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 33 - 100
Target Start/End: Complemental strand, 18407772 - 18407705
Alignment:
Q  33 cgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||||||| ||||||||||||||||||||||||  ||| ||||  ||||||||| |||| |||||    
T  18407772 cgacacttgtaattacactgaattatgtgatttttttgaattattagctgtgtcggcatgtctgtgtc 18407705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 28 - 119
Target Start/End: Complemental strand, 34897143 - 34897052
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcatagg 119  Q
    |||| |||||| | || |||||||||||||||||||||| | |||| ||||   |||||| |||||| |||||||| | |||||||||||||    
T  34897143 gacatcgacacatataattacactgaattatgtgattttctcaaattattagcggtgtcgacgtgtctgtgtccgtttatgtgcttcatagg 34897052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 8343030 - 8342980
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataatta 78  Q
    |||||||||||||||| ||||||| |||||||||||||||| |||| ||||    
T  8343030 gacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 8342980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 24613578 - 24613509
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtg 98  Q
    |||||||||||||||| ||||||| ||||||||||| |||| |||| ||||  |||||||| |||||||||    
T  24613578 gacaccgacacttgtaattacacttaattatgtgat-ttttcaaattattagctgtgtcggtgtgtcagtg 24613509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 29447529 - 29447467
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgat 63  Q
    ||||| |||||||||||||||||||| |||||| |||| | || ||||||| |||||||||||    
T  29447529 gacacatgtcgtgtctgacaccgacacgacaccaacacatataattacacttaattatgtgat 29447467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 26902149 - 26902214
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 66  Q
    ||||||||||||||| |||||  | | ||||||||||| | || ||||||||||||||||||||||    
T  26902149 gacacgtgtcgtgtccgacactcatacgacaccgacacatataattacactgaattatgtgatttt 26902214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 30077388 - 30077461
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 101  Q
    ||||| |||||||||| ||||||||||||||||||| |||| |||| ||||  || || |||||||| ||||||    
T  30077388 gacacggacacttgtaattacactgaattatgtgatgttttcaaattattagctgcgttggcgtgtccgtgtcc 30077461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 40332248 - 40332211
Alignment:
Q  29 acaccgacacttgtagttacactgaattatgtgatttt 66  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  40332248 acaccgacacttgtaattacactgaattatgtgatttt 40332211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 24362175 - 24362275
Alignment:
Q  1 gacacgtgtcgtgtctg-acaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 99  Q
    ||||||||||||||| | ||||||||| ||||  ||||| | || |||||||||||||||||||| | | |||| ||||   ||||||||||||| ||||    
T  24362175 gacacgtgtcgtgtccggacaccgacacgacattgacacatataattacactgaattatgtgattctctcaaattattagcggtgtcggcgtgtcggtgt 24362274  T
Q  100 c 100  Q
    |    
T  24362275 c 24362275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 100
Target Start/End: Complemental strand, 24669491 - 24669419
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    |||||||||||||||| |||||||||||||||| ||||  | |||| ||||   ||||| |||||||||||||    
T  24669491 gacaccgacacttgtaattacactgaattatgtaatttcctcaaattattaacggtgtcagcgtgtcagtgtc 24669419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 103
Target Start/End: Complemental strand, 3677820 - 3677769
Alignment:
Q  52 gaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||||||||||||||| |||| ||||||||  |||||||| |||||    
T  3677820 gaattatgtgattttttaaaattattaattgtgtcgatgtgtcagtatccgt 3677769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 18964234 - 18964163
Alignment:
Q  29 acaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    |||||||||| | || ||||| |||||||||||||||| ||||| ||||| |||| | | ||||||||||||    
T  18964234 acaccgacacatataattacattgaattatgtgattttctaaaaaaattagttgtcttgacgtgtcagtgtc 18964163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 105
Target Start/End: Original strand, 24196628 - 24196675
Alignment:
Q  58 tgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtat 105  Q
    ||||||||||| |||| |||| ||||||||||||||| ||||||||||    
T  24196628 tgtgattttttcaaattattagttgtgtcggcgtgtcggtgtccgtat 24196675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 24858076 - 24858030
Alignment:
Q  21 ccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 68  Q
    |||||| |||| ||||||||||| ||||||||||||||||||||||||    
T  24858076 ccgacacgacaacgacacttgta-ttacactgaattatgtgatttttt 24858030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 68
Target Start/End: Complemental strand, 31514930 - 31514891
Alignment:
Q  29 acaccgacacttgtagttacactgaattatgtgatttttt 68  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  31514930 acaccaacacttgtagttacgctgaattatgtgatttttt 31514891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 100
Target Start/End: Complemental strand, 44067569 - 44067502
Alignment:
Q  33 cgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    |||||||| || |||||||| ||||||| ||||| | |||| |||||  |||||||||||||||||||    
T  44067569 cgacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtc 44067502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 7 - 93
Target Start/End: Complemental strand, 11944744 - 11944658
Alignment:
Q  7 tgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgt 93  Q
    |||||||| ||||| | ||| ||||||||||| | || ||||||||| |||||||||||| | |||| ||||   ||||||||||||    
T  11944744 tgtcgtgtatgacatcaacacgacaccgacacatataattacactgagttatgtgattttatcaaattattaacagtgtcggcgtgt 11944658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 119 - 149
Target Start/End: Original strand, 19177456 - 19177486
Alignment:
Q  119 gttgtatcataattagatagttgacctacac 149  Q
    |||||||||||||||||||||||||||||||    
T  19177456 gttgtatcataattagatagttgacctacac 19177486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 20679395 - 20679473
Alignment:
Q  27 tgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtat 105  Q
    |||||||||||||| || |||||||||| ||||||||||| | |||| ||||   |||||| | |||||||||| ||||    
T  20679395 tgacaccgacacttataattacactgaactatgtgattttctcaaattattaggggtgtcgacatgtcagtgtctgtat 20679473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 119 - 149
Target Start/End: Complemental strand, 44206284 - 44206254
Alignment:
Q  119 gttgtatcataattagatagttgacctacac 149  Q
    |||||||||||||||||||||||||||||||    
T  44206284 gttgtatcataattagatagttgacctacac 44206254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 24727726 - 24727826
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtga--ttttttaaaataattatttgtgtcggcgtgtcagtg 98  Q
    |||||||||| |||  || |||||||||||||  ||||||| | |||||||| ||||||| |  |||||| |||| |||| |||||| | ||||||||||    
T  24727726 gacacgtgtcatgttcgataccgacatgacactaacacttgaaattacactgcattatgtaattttttttcaaattattagttgtgttgacgtgtcagtg 24727825  T
Q  99 t 99  Q
    |    
T  24727826 t 24727826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 40 - 116
Target Start/End: Original strand, 6065670 - 6065746
Alignment:
Q  40 tgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcat 116  Q
    |||| ||| |||| |||||||||||||||| ||| ||||  ||| |||| ||| ||||||||||||  |||||||||    
T  6065670 tgtaattatactgtattatgtgattttttagaattattaactgtatcggtgtgccagtgtccgtatccgtgcttcat 6065746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 28 - 100
Target Start/End: Original strand, 13844597 - 13844669
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||||||| | || ||||||| |||||||||||||| | |||| ||||   ||||||||||||| |||||    
T  13844597 gacaccgacacatataattacactcaattatgtgattttctcaaattattagcagtgtcggcgtgtccgtgtc 13844669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 45 - 73
Target Start/End: Complemental strand, 22493535 - 22493507
Alignment:
Q  45 ttacactgaattatgtgattttttaaaat 73  Q
    |||||||||||||||||||||||||||||    
T  22493535 ttacactgaattatgtgattttttaaaat 22493507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 31548289 - 31548345
Alignment:
Q  23 gacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattat 79  Q
    |||||||||||||||| |||  ||||| |||||||||| ||||| | ||||||||||    
T  31548289 gacatgacaccgacacatgtgattacattgaattatgtcattttatcaaataattat 31548345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 7e-23; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 28 - 103
Target Start/End: Complemental strand, 18422021 - 18421946
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||||||||| ||||||||||||||||||| |||| |||| |||| ||||||||||||||||||||||||    
T  18422021 gacaccgacacttgtaattacactgaattatgtgatatttttaaattattaattgtgtcggcgtgtcagtgtccgt 18421946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 34784956 - 34785058
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    |||| |||||||||| || ||||||| ||||||||||| | || ||||||| |||||||||||||| ||||| ||||| ||||||||| |||||||||||    
T  34784956 gacaggtgtcgtgtccgataccgacacgacaccgacacatataattacactaaattatgtgattttctaaaaaaattagttgtgtcggtgtgtcagtgtc 34785055  T
Q  101 cgt 103  Q
    |||    
T  34785056 cgt 34785058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 2 - 103
Target Start/End: Original strand, 30717505 - 30717606
Alignment:
Q  2 acacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 101  Q
    |||||||||||||| |||| ||||| |||| ||||||||||| |||||||||||||||||||||||| |||| ||||  | ||||||  |||||||||||    
T  30717505 acacgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtgattttttcaaattattagctttgtcggtttgtcagtgtcc 30717604  T
Q  102 gt 103  Q
    ||    
T  30717605 gt 30717606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 6 - 101
Target Start/End: Original strand, 11223842 - 11223937
Alignment:
Q  6 gtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 101  Q
    |||||||||| |||||| |||||||||||||||||||| |||||||||||||||| ||||||| |||  ||||  |||||| ||||||| ||||||    
T  11223842 gtgtcgtgtccgacacctacatgacaccgacacttgtaattacactgaattatgttattttttcaaaatattagctgtgtcagcgtgtctgtgtcc 11223937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 28 - 103
Target Start/End: Complemental strand, 15972931 - 15972856
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||||||||| |||||||||||| ||| ||||||| |||| |||| ||||||||||||||||||||||||    
T  15972931 gacaccgacacttgtaattacactgaattgtgtaattttttcaaattattaattgtgtcggcgtgtcagtgtccgt 15972856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 26769596 - 26769497
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||||||||||| || |||||||||||||||||||||||| ||||||   || ||||||| |||| |||| |||| ||||||||||||||| |||||    
T  26769596 gacacgtgtcgtgtccgataccgacatgacaccgacacttgtaattacaccagataatgtgatattttcaaattattagttgtgtcggcgtgtctgtgtc 26769497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 15657949 - 15657847
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||||||| ||| |||| | ||| |||||||||| ||||| |||||||||||||||||||||||  |||| |||| ||| |||||||||| ||||||    
T  15657949 gacacgtgtcgcgtccgacatcaacacgacaccgacatttgtaattacactgaattatgtgatttttacaaattattagttgagtcggcgtgttagtgtc 15657850  T
Q  101 cgt 103  Q
    |||    
T  15657849 cgt 15657847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 20242728 - 20242801
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 101  Q
    ||||||||||| | || |||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||    
T  20242728 gacaccgacacatataattacactgaattatgtgattttctaaaaaaattagttgtgtcggcgtgtcagtgtcc 20242801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 19536398 - 19536474
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtga-ttttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||||||||| |||||||||||||||||| |||||| |||| |||| |||||||||||||||| |||||||    
T  19536398 gacaccgacacttgtaattacactgaattatgtgatttttttcaaattattagttgtgtcggcgtgtcattgtccgt 19536474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 30404855 - 30404926
Alignment:
Q  32 ccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||||| |||||||||||||||||||||||| |||| ||||   ||||||||||||||||||||||    
T  30404855 ccgacacttgtaattacactgaattatgtgattttttcaaattattaaccgtgtcggcgtgtcagtgtccgt 30404926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 28 - 103
Target Start/End: Complemental strand, 37559035 - 37558960
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||||||||| ||||| |||||||||||||||||  |||| ||||  |||||||||||||||||||||||    
T  37559035 gacaccgacacttgtaattacattgaattatgtgatttttacaaattattagctgtgtcggcgtgtcagtgtccgt 37558960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 12668416 - 12668506
Alignment:
Q  20 accgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtg 110  Q
    ||||||| ||||||||||||| || |||||||||||||||| ||||||| |||| |||| || ||||||||||||||| || || ||||||    
T  12668416 accgacacgacaccgacacttataattacactgaattatgtcattttttcaaattattagttatgtcggcgtgtcagtatctgtgtttgtg 12668506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 27 - 101
Target Start/End: Original strand, 18841013 - 18841087
Alignment:
Q  27 tgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 101  Q
    ||||||||||||||||| ||||||| |||||||| ||||||| |||| |||| ||||||| ||||||||||||||    
T  18841013 tgacaccgacacttgtaattacacttaattatgtaattttttcaaattattagttgtgtcagcgtgtcagtgtcc 18841087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 23058433 - 23058519
Alignment:
Q  18 acaccgacatgacaccgacacttgtagttacactgaattatgtga-ttttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    ||||||||| |||||||||||||||| |||||||| ||||||||| |||||| |||| |||| |||||| ||||||||| |||||||    
T  23058433 acaccgacacgacaccgacacttgtaattacactggattatgtgatttttttcaaattattaattgtgtgggcgtgtcactgtccgt 23058519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 4882678 - 4882747
Alignment:
Q  9 tcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataatta 78  Q
    |||||||||||||||||| |||| ||||||||||| |||||||||||||| | ||||||| |||||||||    
T  4882678 tcgtgtctgacaccgacacgacatcgacacttgtaattacactgaattatatcattttttcaaataatta 4882747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 37419820 - 37419727
Alignment:
Q  9 tcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccg 102  Q
    ||||||| |||||||||| ||||||| |||||||| |||||||||||| ||||||||||| |||| |||     ||||||||||||||||||||    
T  37419820 tcgtgtccgacaccgacacgacaccggcacttgtaattacactgaattttgtgattttttcaaattatttgccatgtcggcgtgtcagtgtccg 37419727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 31 - 103
Target Start/End: Complemental strand, 6940310 - 6940238
Alignment:
Q  31 accgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    ||||||||||||| ||||||| |||||||| | |||||||||| ||||  |||||||||||||||||||||||    
T  6940310 accgacacttgtaattacacttaattatgtaactttttaaaattattagctgtgtcggcgtgtcagtgtccgt 6940238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 20539675 - 20539750
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||||||||| ||||||| |||||| ||||||||| |||| ||||  ||||||| |||||||||||||||    
T  20539675 gacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcgacgtgtcagtgtccgt 20539750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 21 - 103
Target Start/End: Complemental strand, 24894454 - 24894372
Alignment:
Q  21 ccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||| || ||| |||||| || || ||||||||||||||||||||| |||| ||||  |||||||||||||||||||||||    
T  24894454 ccgacacgaaaccaacacttttaattgcactgaattatgtgatttttttaaattattagctgtgtcggcgtgtcagtgtccgt 24894372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 34337155 - 34337252
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||||| ||||| |||||||||| |||||||||||||||| |||     |||||||||||||||| |||| || |  ||||||||||||||| ||||    
T  34337155 gacacgtgttgtgtccgacaccgacaggacaccgacacttgtaatta-----aattatgtgattttttcaaattatcaactgtgtcggcgtgtcaatgtc 34337249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 103
Target Start/End: Original strand, 21374706 - 21374775
Alignment:
Q  34 gacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||| |||||||||||||||| ||||||| |||| ||||  ||||||||||||| |||||||||    
T  21374706 gacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgttagtgtccgt 21374775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 100
Target Start/End: Complemental strand, 21624325 - 21624252
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatg-tgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    |||||||||||||||| ||||||||||||||| |  ||||||||||| ||||  ||||||||||||||||||||    
T  21624325 gacaccgacacttgtaattacactgaattatgctatttttttaaaattattagctgtgtcggcgtgtcagtgtc 21624252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 33153488 - 33153415
Alignment:
Q  22 cgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtca 95  Q
    ||||| ||||| |||||||||| |||||||||||||||||||||||| |||| ||||  ||| |||||||||||    
T  33153488 cgacacgacacggacacttgtaattacactgaattatgtgatttttttaaatcattagatgtttcggcgtgtca 33153415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 2438720 - 2438793
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||||||||| |||||||||||||||||||||||| |||| ||||  |||||| ||  ||||||||||||    
T  2438720 gacaccgacacttgtaattacactgaattatgtgattttttgaaattattagctgtgtcagc--gtcagtgtccgt 2438793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 100
Target Start/End: Complemental strand, 20473380 - 20473308
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    |||| ||||||||||| |||||||||||||| ||| ||||| |||| |||| |||||||||| ||||||||||    
T  20473380 gacatcgacacttgtaattacactgaattatatgagttttttaaattattagttgtgtcggcatgtcagtgtc 20473308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 100
Target Start/End: Original strand, 36756345 - 36756417
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||||||||| || |||||||||||||||| |||| || |||| |||| |||||||| ||||||||||||    
T  36756345 gacaccgacacttataattacactgaattatgttatttcttcaaattattagttgtgtcgacgtgtcagtgtc 36756417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 100
Target Start/End: Original strand, 38117160 - 38117232
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    |||||| ||||||||| |||||| ||| ||||||||||||| |||| ||||  ||||||||||||||||||||    
T  38117160 gacaccaacacttgtaattacaccgaagtatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 38117232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 103
Target Start/End: Original strand, 14996217 - 14996300
Alignment:
Q  21 ccgacatgacaccgacacttgtagttacactgaattatgtga-ttttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||| |||||||||||||||| ||||||| |||||| ||| |||||| |||| ||||  ||||||||| |||||||||||||    
T  14996217 ccgacaagacaccgacacttgtaattacactaaattatatgatttttttcaaattattagctgtgtcggcttgtcagtgtccgt 14996300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 103
Target Start/End: Complemental strand, 30335475 - 30335400
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||| ||||| ||||||| |||||||| ||||||| |||| |||| |||||||||||||  |||||||||    
T  30335475 gacaccgacatttgtaattacactaaattatgtcattttttcaaattattagttgtgtcggcgtgctagtgtccgt 30335400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 36096349 - 36096448
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||||||||||| |||| ||||| ||||||||||  | || |||||||| ||| ||||||||| ||||| | |||  |||||||||||||| |||||    
T  36096349 gacacgtgtcgtgtccgacatcgacacgacaccgacaaatataattacactgcattttgtgattttctaaaaaatttagctgtgtcggcgtgtccgtgtc 36096448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 103
Target Start/End: Original strand, 12940941 - 12941011
Alignment:
Q  33 cgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    ||||| ||||| |||||||||||||| ||||||||| |||| |||| |||||||  |||||||||||||||    
T  12940941 cgacatttgtaattacactgaattatatgattttttcaaattattagttgtgtcaacgtgtcagtgtccgt 12941011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 27084343 - 27084229
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||||||||||| ||||||||||||| | ||||||||     |||| |||||||| ||||||| | |||| ||||   ||||||| ||||| |||||    
T  27084343 gacacgtgtcgtgtccgacaccgacatgaaatcgacactt----atacattgaattatatgattttctcaaattattagcagtgtcggagtgtccgtgtc 27084248  T
Q  101 cgtatttgtgcttcatagg 119  Q
    |||||  ||||||||||||    
T  27084247 cgtatccgtgcttcatagg 27084229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 35056953 - 35056896
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattat 58  Q
    ||||||||||||||| |||||||||| ||||||||||| | || ||||||||||||||    
T  35056953 gacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgaattat 35056896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 974805 - 974746
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcg 87  Q
    |||||||||||||||| ||||||||||| ||||||| |||| |||| |||| ||||||||    
T  974805 gacaccgacacttgtaattacactgaataatgtgatcttttcaaattattagttgtgtcg 974746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 39 - 105
Target Start/End: Original strand, 29367381 - 29367448
Alignment:
Q  39 ttgtagttacactgaattatgtga-ttttttaaaataattatttgtgtcggcgtgtcagtgtccgtat 105  Q
    ||||| |||||||||||||||||| ||||||||||| |||| ||||| ||||||||| ||||| ||||    
T  29367381 ttgtaattacactgaattatgtgatttttttaaaattattaattgtgccggcgtgtccgtgtctgtat 29367448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 45 - 103
Target Start/End: Original strand, 16069272 - 16069330
Alignment:
Q  45 ttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||||||| ||||||||| |||| ||||   ||||||||||||||||||||||    
T  16069272 ttacactgaattatatgatttttttaaattattaacggtgtcggcgtgtcagtgtccgt 16069330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 5040792 - 5040752
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgatttttt 68  Q
    |||||||||||||||| ||||| ||||||||||||||||||    
T  5040792 gacaccgacacttgtaattacattgaattatgtgatttttt 5040752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 27 - 103
Target Start/End: Complemental strand, 21091782 - 21091706
Alignment:
Q  27 tgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||| |||||||||| |||||||||| ||||| ||||| | |||| ||||   ||||||| ||||||||||||||    
T  21091782 tgacactgacacttgtaattacactgaagtatgttattttcttaaattattagcggtgtcggtgtgtcagtgtccgt 21091706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 27286266 - 27286370
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    |||| |||||||||| |||| ||||||||||  ||||| | || ||||||| ||||||||||| || | |||| ||||    ||||||||| ||||||||    
T  27286266 gacatgtgtcgtgtccgacatcgacatgacattgacacctataattacacttaattatgtgatcttatcaaattattagcgttgtcggcgtatcagtgtc 27286365  T
Q  101 cgtat 105  Q
    |||||    
T  27286366 cgtat 27286370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 124
Target Start/End: Complemental strand, 24009337 - 24009259
Alignment:
Q  45 ttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcataggttgta 124  Q
    |||||||| ||| ||||||||| ||||| |||||  ||||||| |||||| ||||||||||  ||||||||||| |||||    
T  24009337 ttacactgcattttgtgattttctaaaaaaattagctgtgtcgccgtgtc-gtgtccgtatccgtgcttcatagattgta 24009259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 24067336 - 24067273
Alignment:
Q  3 cacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 66  Q
    ||||||| ||||| ||||||||||||| ||| ||||||||  ||||| |||||||||| |||||    
T  24067336 cacgtgttgtgtccgacaccgacatgaaaccaacacttgtgattacattgaattatgtcatttt 24067273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 38442365 - 38442295
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 99  Q
    ||||||||||||| || ||| | |||||||||||||||||| |||| |||| ||||| | ||||||||||||    
T  38442365 gacaccgacacttataattatattgaattatgtgatttttttaaatcattagttgtg-ccgcgtgtcagtgt 38442295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 18255981 - 18256039
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtc 86  Q
    ||||||||||||| || ||||| | |||||||||||||||| |||| ||||| ||||||    
T  18255981 gacaccgacacttctaattacattaaattatgtgatttttttaaattattatctgtgtc 18256039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 19574019 - 19573958
Alignment:
Q  45 ttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtattt 107  Q
    |||||||||||||||| ||||| | |||| |||||  ||||||||||||| ||||||||||||    
T  19574019 ttacactgaattatgttattttcttaaattattatcggtgtcggcgtgtc-gtgtccgtattt 19573958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 45 - 103
Target Start/End: Complemental strand, 21616803 - 21616745
Alignment:
Q  45 ttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||||||||||||||| | |||| ||||   ||||||||||||| ||||||||    
T  21616803 ttacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtccgtgtccgt 21616745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 21782836 - 21782890
Alignment:
Q  45 ttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 99  Q
    |||||||||||||||||||||| | |||| ||||   ||||||||||||||||||    
T  21782836 ttacactgaattatgtgattttctcaaattattagcagtgtcggcgtgtcagtgt 21782890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 41843498 - 41843424
Alignment:
Q  29 acaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||| | || ||| || ||||||||||||||  ||||| | ||| || |||||||||||||||||||||    
T  41843498 acaccgacacatataattataccgaattatgtgatttcctaaaaaatttagttttgtcggcgtgtcagtgtccgt 41843424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 23718082 - 23718009
Alignment:
Q  30 caccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    ||||||||| | || |||||||||||||||||| ||| | |||| ||||   ||||||| ||||||||||||||    
T  23718082 caccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgt 23718009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 24105754 - 24105681
Alignment:
Q  30 caccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    ||||||||| | || |||||||||||||||||| ||| | |||| ||||   ||||||| ||||||||||||||    
T  24105754 caccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgt 24105681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 103
Target Start/End: Complemental strand, 39323316 - 39323247
Alignment:
Q  34 gacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||| |||||||||||||||| ||||| | |||| ||||   |||||| ||| |||||||||||    
T  39323316 gacacttgtaattacactgaattatgtaattttgtcaaattattagcggtgtcgacgtttcagtgtccgt 39323247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 44860405 - 44860340
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 66  Q
    ||||| |||||||||  ||||| ||| ||||||||||| | || ||||||||||||||| ||||||    
T  44860405 gacacatgtcgtgtccaacaccaacacgacaccgacacatataattacactgaattatgcgatttt 44860340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 20922929 - 20923016
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataatta-tttgtgtcggcgtgtcagtgtccgtatttgtgcttcata 117  Q
    ||||| ||||| | || ||||||| |||||||||||||| ||||| ||| |  ||||||   |||||||||||| ||||||||||||||||    
T  20922929 gacacagacacatataattacactaaattatgtgattttctaaaaaaatgagcttgtgt---cgtgtcagtgtctgtatttgtgcttcata 20923016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 28524511 - 28524447
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattt 65  Q
    ||||||||| ||||| |||||| |||  ||| |||||| | || |||||||||||||||||||||    
T  28524511 gacacgtgttgtgtccgacaccaacacaacaacgacacatataattacactgaattatgtgattt 28524447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 36409612 - 36409673
Alignment:
Q  10 cgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaat 73  Q
    |||||| |||||| |||||||||||||||   || ||||||| |||||||||||||||| ||||    
T  36409612 cgtgtcagacaccaacatgacaccgacac--ataattacactaaattatgtgattttttcaaat 36409673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 44635556 - 44635520
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgatt 64  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  44635556 gacaccgacacttgtaattacactgaattacgtgatt 44635520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 55; Significance: 3e-22; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 178813 - 178895
Alignment:
Q  22 cgacatgacaccgacacttgtagttacactgaattatg-tgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    ||||||||||| |||||||||| ||||||||||||||| ||||||||| |||| |||| ||||||||||||||||||||||||    
T  178813 cgacatgacactgacacttgtaattacactgaattatgatgattttttcaaattattagttgtgtcggcgtgtcagtgtccgt 178895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 34 - 105
Target Start/End: Original strand, 192256 - 192327
Alignment:
Q  34 gacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtat 105  Q
    |||||||||| |||||| ||||||||| ||||| | |||| ||||   ||||||||||||||||||||||||    
T  192256 gacacttgtaattacaccgaattatgtaattttctcaaattattaacggtgtcggcgtgtcagtgtccgtat 192327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 241679 - 241577
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||||||||||| |||||| ||| ||||||||||||  || ||||||| |||||||||||||||  |||| ||||  ||||||||||||||||||||    
T  241679 gacacgtgtcgtgtccgacaccaacacgacaccgacactcataattacactaaattatgtgatttttccaaattattagctgtgtcggcgtgtcagtgtc 241580  T
Q  101 cgt 103  Q
    |||    
T  241579 cgt 241577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 8609 - 8722
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||| ||||||| || ||||||| |||||||||| ||||| ||| || |||||||||||| |||| |||| |||| |||||||||| |||||||||     
T  8609 gacacgtatcgtgtccgataccgacacgacaccgacatttgtaattataccgaattatgtgatattttcaaattattagttgtgtcggcatgtcagtgtt 8708  T
Q  101 cgtatttgtgcttc 114  Q
    |||||| |||||||    
T  8709 cgtattcgtgcttc 8722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 20239 - 20155
Alignment:
Q  19 caccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||| ||||| |||||||||| |||||||||||||||||||||||| |||| ||||  ||||||||||||||| |||||||    
T  20239 caccgacacgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgt 20155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 51888 - 51794
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||| ||||||||||||||||||        ||||||||| |||||||||||||||||||||||| |||| ||||  ||||||||||||||||||||    
T  51888 gacacgtatcgtgtctgacaccgaca--------acacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 51797  T

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Target: scaffold0306 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 28 - 103
Target Start/End: Complemental strand, 13458 - 13383
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    ||||||||| |||||| || ||||||||||||||||||| | |||| |||| ||||||||||||||||||||||||    
T  13458 gacaccgacccttgtaattgcactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgt 13383  T

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Target: scaffold0171 (Bit Score: 48; Significance: 4e-18; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 23485 - 23406
Alignment:
Q  21 ccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    |||||| ||||||||||||| || ||||||||||||||||||||||||  | | ||||| ||||||||||||||||||||    
T  23485 ccgacacgacaccgacacttataattacactgaattatgtgatttttttgagttattatctgtgtcggcgtgtcagtgtc 23406  T

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Target: scaffold0171; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 23588 - 23529
Alignment:
Q  9 tcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 68  Q
    ||||||| |||||||| | ||||| ||||||| || ||||||||||||||||||||||||    
T  23588 tcgtgtccgacaccgaaacgacactgacacttataattacactgaattatgtgatttttt 23529  T

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Target: scaffold0152 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 21869 - 21944
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    ||||||||| |||||| || ||||||||||||||||||| | |||| |||| ||||||||||||||||||||||||    
T  21869 gacaccgacccttgtaattgcactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgt 21944  T

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Target: scaffold0136 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 3823 - 3922
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    |||| |||||||||| |||||| ||| ||||| |||||||||| |||||||||||||||||||||||| |||| ||||   |||||||| | ||||||||    
T  3823 gacatgtgtcgtgtccgacaccaacacgacactgacacttgtaattacactgaattatgtgatttttttaaattattaaccgtgtcggcatatcagtgtc 3922  T

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Target: scaffold0027 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 28 - 103
Target Start/End: Complemental strand, 46740 - 46665
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||| ||||| |||||||||||||||||||||||| |||| ||||  ||||||||||||||| |||||||    
T  46740 gacaccgacatttgtaattacactgaattatgtgattttttcaaattattaactgtgtcggcgtgtcattgtccgt 46665  T

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Target: scaffold0361 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 14580 - 14498
Alignment:
Q  36 cacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgt-cagtgtccgtatttgtgcttcata 117  Q
    |||||||| |||||||||||||||||||||||| |||| |||| |||||||||||||| | ||||||||||  ||||||||||    
T  14580 cacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtccggtgtccgtatccgtgcttcata 14498  T

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Target: scaffold0019 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 71810 - 71709
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatt--ttttaaaataattatttgtgtcggcgtgtcagtg 98  Q
    ||||||||| ||||| |||||||||| ||||| |||||| ||| |||||||||||| |||||||  |||| |||| ||||  ||||||||||||||||||    
T  71810 gacacgtgttgtgtccgacaccgacacgacactgacactagtaattacactgaattgtgtgattttttttcaaattattagctgtgtcggcgtgtcagtg 71711  T
Q  99 tc 100  Q
    ||    
T  71710 tc 71709  T

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Target: scaffold0008 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 2 - 103
Target Start/End: Original strand, 263347 - 263448
Alignment:
Q  2 acacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 101  Q
    ||||||||||||||||||||||||| ||||| ||||||| || ||||||||||||||||| |||| | |||| ||||   |||| | | |||||||||||    
T  263347 acacgtgtcgtgtctgacaccgacacgacactgacacttataattacactgaattatgtggttttctcaaattattagcagtgttgacatgtcagtgtcc 263446  T
Q  102 gt 103  Q
    ||    
T  263447 gt 263448  T

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Target: scaffold0004 (Bit Score: 45; Significance: 3e-16; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 34 - 118
Target Start/End: Complemental strand, 92859 - 92775
Alignment:
Q  34 gacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcatag 118  Q
    |||||||||| |||||||||||||||| ||||| | |||| ||||   ||||||||||||||||||||||||  |||||||||||    
T  92859 gacacttgtaattacactgaattatgtaattttctcaaattattagcggtgtcggcgtgtcagtgtccgtatccgtgcttcatag 92775  T

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Target: scaffold0004; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 123686 - 123612
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtga---ttttttaaaataattatttgtgtcggcgtgtcagtgt 99  Q
    |||||||||||||||| ||||||||||||||||||   |||||| |||| ||||  ||||| |||||||||||||    
T  123686 gacaccgacacttgtaattacactgaattatgtgattctttttttaaattattagctgtgttggcgtgtcagtgt 123612  T

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Target: scaffold0004; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 83218 - 83173
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaat 73  Q
    |||||||||| ||||| |||||||||||||||| ||||||| ||||    
T  83218 gacaccgacatttgtaattacactgaattatgtcatttttttaaat 83173  T

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Target: scaffold0652 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 463 - 538
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||||||||| |||||||||||| ||||||||||| |||| ||||   |||||||||| |||||||||||    
T  463 gacaccgacacttgtaattacactgaattttgtgattttttcaaattattagcagtgtcggcgtatcagtgtccgt 538  T

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Target: scaffold0053 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 103
Target Start/End: Complemental strand, 8856 - 8781
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||||||||| ||||||| ||| || ||||||||| |||| ||||  |||||||||||||||||||||||    
T  8856 gacaccgacacttgtaattacactaaataatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgt 8781  T

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Target: scaffold0086 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 3012 - 2946
Alignment:
Q  2 acacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 68  Q
    ||||||||||||||||| ||||||| ||||| || ||||||| ||||||| ||||||||||||||||    
T  3012 acacgtgtcgtgtctgataccgacacgacactgatacttgtaattacactaaattatgtgatttttt 2946  T

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Target: scaffold0011 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 17750 - 17824
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccg 102  Q
    |||||||||||||||| ||||||| |||||||||||||||| |||| |||| ||||||| |||||| | ||||||    
T  17750 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcagcgtgttattgtccg 17824  T

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Target: scaffold0044 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 53265 - 53200
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 66  Q
    |||||||||| |||| |||||||||| | ||||||||||| || ||||||||||||||||||||||    
T  53265 gacacgtgtcatgtccgacaccgacacggcaccgacacttataattacactgaattatgtgatttt 53200  T

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Target: scaffold0021 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 130538 - 130465
Alignment:
Q  30 caccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||||||| |||||||||||||||||||||||| |||  ||||  ||||||||| ||||| |||||||    
T  130538 caccgacacttgtaattacactgaattatgtgattttttcaaactattaactgtgtcggcttgtcattgtccgt 130465  T

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Target: scaffold0623 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 5970 - 6070
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||||||||||  |||||||| | ||||||||||| | || |||||||| ||| ||||||||| ||||| |||||  ||| |||||||||| |||||    
T  5970 gacacgtgtcgtgttcgacaccgatacgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagatgtatcggcgtgtcggtgtc 6069  T
Q  101 c 101  Q
    |    
T  6070 c 6070  T

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Target: scaffold0083 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 45531 - 45607
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgt-gattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||||||||||| ||||||||||||||||   |||||| | ||||||| |||||||| |||||||||||||||    
T  45531 gacaccgacacttgtaattacactgaattatgtatttttttttagataattaattgtgtcgacgtgtcagtgtccgt 45607  T

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Target: scaffold0036 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 9721 - 9819
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 99  Q
    |||| ||||||||||||||||| ||| ||||||||||| | || ||||||||||||| |||||||| | |||| |||| | | |||||| |||| ||||    
T  9721 gacaagtgtcgtgtctgacaccaacacgacaccgacacatataattacactgaattaagtgattttctcaaattattagtggcgtcggcatgtctgtgt 9819  T

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Target: scaffold0246 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 35 - 100
Target Start/End: Complemental strand, 19626 - 19562
Alignment:
Q  35 acacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 100  Q
    ||||||||| ||||||||||||||||||| |||| |||| |||| |||| ||||||||||||||||    
T  19626 acacttgtaattacactgaattatgtgat-ttttcaaattattagttgtatcggcgtgtcagtgtc 19562  T

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Target: scaffold0025 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 23828 - 23788
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgatttttt 68  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  23828 gacaccgacacttgtaattacactgaattatgtgatttttt 23788  T

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Target: scaffold0722 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 106
Target Start/End: Original strand, 7033 - 7111
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatt 106  Q
    |||||| ||||||||| ||| ||| |||||||| ||||||| |||| ||||  ||||||| ||| ||||||||||||||    
T  7033 gacacctacacttgtaattatactaaattatgtaattttttcaaattattagctgtgtcgacgtatcagtgtccgtatt 7111  T

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Target: scaffold0122 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 94
Target Start/End: Complemental strand, 8067 - 8002
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtc 94  Q
    ||||||||||||| || |||||||| ||||| ||||||||| |||| |||| |||||||||||||||    
T  8067 gacaccgacactt-taattacactgtattatatgattttttcaaattattagttgtgtcggcgtgtc 8002  T

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Target: scaffold0122; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 8739 - 8651
Alignment:
Q  13 gtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 101  Q
    ||||||||  |||| ||||||||||||| || ||| |||||| |||||||||||   |||| ||||   |||||| |||||||||||||    
T  8739 gtctgacatagacacgacaccgacacttataattatactgaactatgtgattttcctaaattattagaagtgtcgacgtgtcagtgtcc 8651  T

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Target: scaffold0050 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 110
Target Start/End: Complemental strand, 70336 - 70254
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtg 110  Q
    ||||||||||||| || |||||||||||||||| ||||||| |||| ||||  ||||||| | |||| ||||| || ||||||    
T  70336 gacaccgacacttataattacactgaattatgttattttttcaaattattaactgtgtcgacatgtctgtgtctgtgtttgtg 70254  T

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Target: scaffold0007 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 33 - 103
Target Start/End: Original strand, 225274 - 225344
Alignment:
Q  33 cgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    |||||||| || ||||| || ||||||| ||||| | |||| ||||| |||||||||||||||||||||||    
T  225274 cgacacttataattacattgtattatgtcattttctcaaattattatctgtgtcggcgtgtcagtgtccgt 225344  T

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Target: scaffold0123 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 44499 - 44564
Alignment:
Q  1 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 66  Q
    ||||||||| |||||  ||||||||| || |||||||| | || ||||||||||||||||||||||    
T  44499 gacacgtgttgtgtccaacaccgacacgataccgacacatataattacactgaattatgtgatttt 44564  T

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Target: scaffold0793 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 4884 - 4924
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgatttttt 68  Q
    |||||| ||||||||| ||||||||||||||||||||||||    
T  4884 gacaccaacacttgtaattacactgaattatgtgatttttt 4924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 118
Target Start/End: Original strand, 7319 - 7403
Alignment:
Q  35 acacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgt-cagtgtccgtatttgtgcttcatag 118  Q
    |||||| || ||||||| |||||||||||||||  |||| |||| |||||||||||||| | ||||| ||||  |||||||||||    
T  7319 acacttataattacactaaattatgtgatttttccaaattattagttgtgtcggcgtgtccggtgtctgtatccgtgcttcatag 7403  T

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Target: scaffold0066 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 33375 - 33430
Alignment:
Q  39 ttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtc 94  Q
    ||||| |||||||||||||||| ||||||| |||| ||||  ||||||||||||||    
T  33375 ttgtaattacactgaattatgttattttttcaaattattagctgtgtcggcgtgtc 33430  T

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Target: scaffold1528 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 1103 - 1025
Alignment:
Q  18 acaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcag 96  Q
    |||||||||  |||| ||||| | ||||||||||||||||||| ||||||| |||| ||||   ||||||| |||||||    
T  1103 acaccgacaccacactgacacatatagttacactgaattatgtaattttttcaaattattagcggtgtcggtgtgtcag 1025  T

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Target: scaffold0168 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 21119 - 21026
Alignment:
Q  10 cgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 103  Q
    ||||||||||||||||| || |||||||| | || ||| || || |||||||||||| | |||| ||||   ||||| || |||||||||||||    
T  21119 cgtgtctgacaccgacacgataccgacacatataattataccgacttatgtgattttctcaaattattaaccgtgtcagcatgtcagtgtccgt 21026  T

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Target: scaffold0116 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 9956 - 9883
Alignment:
Q  28 gacaccgacacttgtagttacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 101  Q
    ||||||||||| | || |||||||| ||| | ||||||| ||||| |||||  |||||||||||||| ||||||    
T  9956 gacaccgacacatataattacactgcattttatgattttctaaaaaaattagctgtgtcggcgtgtcggtgtcc 9883  T

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