View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14721_high_16 (Length: 202)
Name: NF14721_high_16
Description: NF14721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14721_high_16 |
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Alignment Details
Target: chr8 (Bit Score: 144; Significance: 6e-76; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 144; E-Value: 6e-76
Query Start/End: Original strand, 14 - 185
Target Start/End: Original strand, 38277812 - 38277982
Alignment:
| Q |
14 |
aaatactaaacagatatttgcagcaaacatataagaaaccagaaattggtgaacatgagaatctaaataatgaaatattgctgaagatttctcctccaag |
113 |
Q |
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| T |
38277812 |
aaatactaaacagatatttgcagcaaacatataagaaaccagaaattggtgaacaagagaatctaaataatgaaatattgctgaagatttctcctccaat |
38277911 |
T |
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| Q |
114 |
taacaatatcatatattacactaattcttgtaaaaaagaaatattacactaattgtttttagttgtcgtttt |
185 |
Q |
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||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||| ||||| |
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| T |
38277912 |
taacaatatcatatattacactaattcttgtaaaaaaaatatattacactaattg-ttttagttgttgtttt |
38277982 |
T |
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