View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14722_low_2 (Length: 547)

Name: NF14722_low_2
Description: NF14722
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14722_low_2
NF14722_low_2
[»] chr7 (35 HSPs)
chr7 (18-181)||(43099927-43100090)
chr7 (248-332)||(43100154-43100239)
chr7 (416-542)||(19329842-19329967)
chr7 (416-542)||(38267040-38267165)
chr7 (410-542)||(35137527-35137658)
chr7 (415-542)||(4999489-4999615)
chr7 (416-527)||(19436176-19436287)
chr7 (416-542)||(8080358-8080483)
chr7 (416-521)||(3434562-3434667)
chr7 (416-521)||(7389389-7389494)
chr7 (416-529)||(36361900-36362013)
chr7 (419-542)||(3783998-3784120)
chr7 (416-519)||(21234401-21234504)
chr7 (416-542)||(38837217-38837342)
chr7 (417-542)||(32951468-32951592)
chr7 (416-529)||(36362026-36362139)
chr7 (410-541)||(3694361-3694491)
chr7 (412-542)||(40846088-40846217)
chr7 (416-542)||(40957707-40957832)
chr7 (416-542)||(46033776-46033901)
chr7 (403-542)||(8238199-8238338)
chr7 (416-536)||(26296644-26296763)
chr7 (409-520)||(35468851-35468962)
chr7 (416-542)||(36208173-36208298)
chr7 (421-542)||(35522881-35523001)
chr7 (416-505)||(46374813-46374902)
chr7 (416-527)||(38044197-38044308)
chr7 (416-542)||(32564401-32564526)
chr7 (416-542)||(41423682-41423807)
chr7 (416-484)||(39255955-39256023)
chr7 (416-482)||(10343597-10343663)
chr7 (457-495)||(16374845-16374883)
chr7 (416-542)||(18207180-18207304)
chr7 (416-542)||(22343361-22343486)
chr7 (416-472)||(31735884-31735940)
[»] chr6 (19 HSPs)
chr6 (416-534)||(15832577-15832694)
chr6 (404-542)||(17598542-17598679)
chr6 (416-542)||(32869678-32869803)
chr6 (419-542)||(22880633-22880755)
chr6 (416-542)||(6209440-6209565)
chr6 (415-542)||(29857826-29857952)
chr6 (416-542)||(11427616-11427743)
chr6 (416-498)||(31109418-31109500)
chr6 (416-542)||(31976248-31976373)
chr6 (419-542)||(23128102-23128224)
chr6 (416-542)||(31110736-31110859)
chr6 (417-492)||(946377-946452)
chr6 (421-520)||(9379708-9379807)
chr6 (416-542)||(31953005-31953130)
chr6 (420-527)||(28536477-28536582)
chr6 (416-542)||(4231548-4231673)
chr6 (416-542)||(15507999-15508124)
chr6 (416-542)||(15990017-15990142)
chr6 (416-542)||(30341335-30341460)
[»] chr8 (27 HSPs)
chr8 (413-542)||(12831044-12831172)
chr8 (416-542)||(14547922-14548047)
chr8 (416-542)||(34012271-34012396)
chr8 (416-542)||(37038479-37038604)
chr8 (416-542)||(40423918-40424043)
chr8 (411-542)||(504096-504226)
chr8 (417-542)||(5957831-5957955)
chr8 (416-521)||(15197333-15197438)
chr8 (416-520)||(10284627-10284731)
chr8 (416-542)||(15048156-15048281)
chr8 (416-542)||(23122572-23122697)
chr8 (416-542)||(1179915-1180040)
chr8 (416-542)||(44507062-44507187)
chr8 (421-542)||(10621062-10621182)
chr8 (411-542)||(43414556-43414686)
chr8 (416-536)||(4854844-4854963)
chr8 (438-542)||(8841407-8841510)
chr8 (416-498)||(14055610-14055692)
chr8 (416-484)||(20074966-20075034)
chr8 (459-542)||(15258904-15258986)
chr8 (410-481)||(30479509-30479580)
chr8 (416-541)||(17443825-17443949)
chr8 (410-542)||(16056376-16056507)
chr8 (410-542)||(16383371-16383502)
chr8 (464-542)||(9122233-9122310)
chr8 (416-498)||(42221515-42221597)
chr8 (416-542)||(34307216-34307341)
[»] chr1 (29 HSPs)
chr1 (410-521)||(8346383-8346494)
chr1 (416-542)||(9474851-9474976)
chr1 (416-542)||(48716257-48716382)
chr1 (419-542)||(44548351-44548473)
chr1 (416-542)||(27564710-27564835)
chr1 (416-542)||(2581915-2582040)
chr1 (416-542)||(38632296-38632421)
chr1 (416-542)||(51898658-51898783)
chr1 (411-542)||(38595149-38595279)
chr1 (416-542)||(41758805-41758930)
chr1 (416-542)||(3000319-3000444)
chr1 (416-542)||(32813247-32813372)
chr1 (416-542)||(47452295-47452420)
chr1 (416-542)||(49811502-49811627)
chr1 (415-521)||(43131-43237)
chr1 (416-542)||(37649198-37649323)
chr1 (416-542)||(45044535-45044660)
chr1 (416-542)||(50630458-50630583)
chr1 (419-505)||(26274435-26274521)
chr1 (442-521)||(13414787-13414866)
chr1 (416-542)||(23597066-23597191)
chr1 (417-505)||(11152389-11152476)
chr1 (411-542)||(5958975-5959105)
chr1 (457-508)||(44334178-44334229)
chr1 (423-521)||(26440741-26440839)
chr1 (416-542)||(37926413-37926538)
chr1 (416-542)||(50590975-50591100)
chr1 (459-542)||(48489343-48489425)
chr1 (416-542)||(41608468-41608593)
[»] chr5 (25 HSPs)
chr5 (416-542)||(6679698-6679823)
chr5 (416-542)||(40145407-40145532)
chr5 (410-542)||(18520859-18520990)
chr5 (416-542)||(2740274-2740399)
chr5 (416-542)||(33149613-33149738)
chr5 (416-542)||(13811652-13811777)
chr5 (416-542)||(28177775-28177900)
chr5 (416-542)||(36732917-36733042)
chr5 (411-542)||(14831809-14831939)
chr5 (416-542)||(35785199-35785324)
chr5 (416-542)||(42414277-42414402)
chr5 (416-542)||(15409585-15409710)
chr5 (414-520)||(35943888-35943994)
chr5 (416-542)||(26720516-26720641)
chr5 (416-542)||(26990265-26990390)
chr5 (416-542)||(31008988-31009113)
chr5 (417-542)||(36875587-36875702)
chr5 (416-505)||(41470427-41470516)
chr5 (416-542)||(2252143-2252268)
chr5 (416-542)||(20073491-20073616)
chr5 (414-542)||(33825299-33825426)
chr5 (462-521)||(31132390-31132449)
chr5 (416-542)||(3921240-3921365)
chr5 (464-520)||(21370052-21370108)
chr5 (416-497)||(6260020-6260101)
[»] chr4 (31 HSPs)
chr4 (416-542)||(41236347-41236472)
chr4 (410-542)||(480422-480553)
chr4 (410-542)||(50052403-50052534)
chr4 (416-542)||(54473508-54473633)
chr4 (416-542)||(29239886-29240011)
chr4 (416-536)||(11511443-11511562)
chr4 (416-536)||(48183030-48183149)
chr4 (407-542)||(42044342-42044476)
chr4 (416-542)||(6034044-6034169)
chr4 (416-536)||(24995088-24995207)
chr4 (416-495)||(50526192-50526271)
chr4 (416-542)||(23608235-23608360)
chr4 (416-520)||(3481654-3481758)
chr4 (416-542)||(29234220-29234345)
chr4 (416-542)||(31910192-31910317)
chr4 (416-542)||(55475191-55475316)
chr4 (421-542)||(53352541-53352660)
chr4 (416-483)||(40574779-40574846)
chr4 (416-484)||(47104544-47104612)
chr4 (424-542)||(28480243-28480360)
chr4 (424-542)||(28481118-28481235)
chr4 (424-542)||(28481993-28482110)
chr4 (464-542)||(41823930-41824007)
chr4 (416-542)||(48647701-48647826)
chr4 (416-520)||(29977885-29977989)
chr4 (448-520)||(56300161-56300233)
chr4 (416-542)||(19670691-19670816)
chr4 (416-542)||(47986208-47986333)
chr4 (416-481)||(29547994-29548059)
chr4 (416-481)||(44536781-44536845)
chr4 (438-542)||(17983718-17983821)
[»] chr2 (29 HSPs)
chr2 (419-542)||(19930795-19930917)
chr2 (416-542)||(10249357-10249482)
chr2 (416-542)||(13438343-13438468)
chr2 (416-536)||(32505629-32505748)
chr2 (419-542)||(28863458-28863580)
chr2 (416-542)||(9058480-9058605)
chr2 (414-542)||(17473018-17473145)
chr2 (416-542)||(40701478-40701603)
chr2 (416-520)||(33436096-33436200)
chr2 (416-495)||(4060685-4060764)
chr2 (416-542)||(7465710-7465835)
chr2 (416-529)||(5574475-5574588)
chr2 (416-520)||(27864704-27864808)
chr2 (416-542)||(20700815-20700940)
chr2 (416-542)||(28381630-28381755)
chr2 (416-542)||(30915463-30915588)
chr2 (416-498)||(38882832-38882913)
chr2 (416-534)||(42257193-42257310)
chr2 (416-521)||(40613897-40614002)
chr2 (416-542)||(17819979-17820104)
chr2 (416-542)||(36168836-36168961)
chr2 (417-498)||(41575138-41575219)
chr2 (416-542)||(38273117-38273242)
chr2 (416-541)||(2533124-2533247)
chr2 (416-484)||(33436211-33436279)
chr2 (416-542)||(26891479-26891604)
chr2 (414-542)||(38732352-38732479)
chr2 (416-542)||(43490121-43490246)
chr2 (438-542)||(2997462-2997565)
[»] chr3 (30 HSPs)
chr3 (416-542)||(53982011-53982136)
chr3 (416-542)||(33644200-33644325)
chr3 (416-542)||(11347897-11348022)
chr3 (416-542)||(17470405-17470530)
chr3 (416-542)||(54868870-54868995)
chr3 (416-528)||(27714879-27714991)
chr3 (416-520)||(33118847-33118951)
chr3 (416-542)||(9562999-9563124)
chr3 (416-529)||(11095342-11095453)
chr3 (416-542)||(49607414-49607539)
chr3 (421-542)||(52629305-52629425)
chr3 (416-495)||(36707445-36707524)
chr3 (416-542)||(8076393-8076518)
chr3 (416-542)||(24699929-24700054)
chr3 (417-542)||(31456690-31456814)
chr3 (416-534)||(26141515-26141632)
chr3 (416-542)||(35536626-35536751)
chr3 (416-534)||(41189747-41189864)
chr3 (421-542)||(26754700-26754820)
chr3 (420-520)||(30801729-30801829)
chr3 (423-481)||(35093592-35093650)
chr3 (416-542)||(51419335-51419460)
chr3 (420-505)||(48587102-48587187)
chr3 (414-481)||(14623874-14623941)
chr3 (416-542)||(8956762-8956887)
chr3 (416-542)||(47531865-47531990)
chr3 (416-542)||(20764890-20765015)
chr3 (416-542)||(48375681-48375806)
chr3 (416-484)||(35965806-35965874)
chr3 (407-542)||(41080700-41080832)
[»] scaffold1268 (1 HSPs)
scaffold1268 (416-542)||(904-1029)
[»] scaffold1267 (1 HSPs)
scaffold1267 (416-542)||(904-1029)
[»] scaffold0321 (1 HSPs)
scaffold0321 (406-542)||(10084-10218)
[»] scaffold0110 (1 HSPs)
scaffold0110 (416-520)||(8859-8963)
[»] scaffold0237 (1 HSPs)
scaffold0237 (415-542)||(4028-4154)
[»] scaffold0316 (1 HSPs)
scaffold0316 (459-520)||(17097-17158)


Alignment Details
Target: chr7 (Bit Score: 164; Significance: 2e-87; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 18 - 181
Target Start/End: Original strand, 43099927 - 43100090
Alignment:
Q  18 ggtaggaagcgccgccggagtagctgcccgggggtggattctgtggaggtggataggaggtgttgttctttttgtcgttgctggatgttgccattgggtt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43099927 ggtaggaagcgccgccggagtagctgcccgggggtggattctgtggaggtggataggaggtgttgttctttttgtcgttgctggatgttgccattgggtt 43100026  T
Q  118 aaagacaaagcgtttaagagagggttagggtatgacttgtgagaaagtttattatattaaggtt 181  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43100027 aaagacaaagcgtttaagagagggttagggtatgacttgtgagaaagtttattatattaaggtt 43100090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 248 - 332
Target Start/End: Original strand, 43100154 - 43100239
Alignment:
Q  248 accacagttattgtgttcttttaattgatt-agtataccaagaggagaaagttttgaacgcgtattaccgtatatacaccttaatc 332  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43100154 accacagttattgtgttcttttaattgatttagtataccaagaggagaaagttttgaacgcgtattaccgtatatacaccttaatc 43100239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 19329842 - 19329967
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||||| ||||||| ||||||||| ||||||| |||||||||||| ||||||||| |||||||||||| |||||| || | ||||    
T  19329842 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttc 19329941  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || ||||||||||| |||||    
T  19329942 tcttttctc-tcctcttctctcttcct 19329967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 38267040 - 38267165
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||| | ||| ||||||||||||| ||||||| |||||||||||| |||||||||||||||||||||| |||||| || | ||||    
T  38267040 gagtaatgatacatagacacccttatgtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 38267139  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || ||||||||||| |||||    
T  38267140 tcttttctc-tcctcttctctcttcct 38267165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 410 - 542
Target Start/End: Original strand, 35137527 - 35137658
Alignment:
Q  410 aaaaaggagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacat 509  Q
    ||||| ||||||||||| ||||||| | ||||||| ||||||||| ||||||| |||||||||||| | |||||||||||||||||||| |||||||||     
T  35137527 aaaaatgagtaatgataaatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaaacac 35137626  T
Q  510 attttctcttttttcttcctcttctctgttcct 542  Q
    | |||||||||| || ||||||||||| |||||    
T  35137627 actttctcttttctc-tcctcttctctcttcct 35137658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 415 - 542
Target Start/End: Complemental strand, 4999615 - 4999489
Alignment:
Q  415 ggagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatatttt 514  Q
    |||||||||||||||||||| | |||| || ||||||||| ||||||| |||||||||||| ||| |||||||||||||||||| ||||||||| | |||    
T  4999615 ggagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgatacgtagtcacgtggaccccgcacaaacacacttt 4999516  T
Q  515 ctcttttttcttcctcttctctgttcct 542  Q
    ||||||| || ||||||||||| |||||    
T  4999515 ctcttttatc-tcctcttctctcttcct 4999489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 416 - 527
Target Start/End: Complemental strand, 19436287 - 19436176
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||| || ||| || || | ||||    
T  19436287 gagtaatgatacatagacatccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcataagcacactttc 19436188  T
Q  516 tcttttttcttc 527  Q
    |||||| |||||    
T  19436187 tcttttctcttc 19436176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 8080483 - 8080358
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||| | ||||||| ||||||||| ||||||| | ||| |||||| |||||||||||||||||||||| |||||| || | ||||    
T  8080483 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 8080384  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || ||||||||||| |||||    
T  8080383 tcttttctc-tcctcttctctcttcct 8080358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 416 - 521
Target Start/End: Original strand, 3434562 - 3434667
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||||| ||||||| ||||||||| ||||||| |||||||||||  ||||||||||||||||||| || |||||| || | ||||    
T  3434562 gagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcacactttc 3434661  T
Q  516 tctttt 521  Q
    ||||||    
T  3434662 tctttt 3434667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 416 - 521
Target Start/End: Original strand, 7389389 - 7389494
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||| | ||||||| ||||||||  ||||||| |||||||||||| |||||||||||||||||||||| |||||| || | ||||    
T  7389389 gagtaatgatacatagacacccttaggtggcaatacactctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 7389488  T
Q  516 tctttt 521  Q
    ||||||    
T  7389489 tctttt 7389494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 416 - 529
Target Start/End: Complemental strand, 36362013 - 36361900
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||| | ||||||| ||||||| | ||||||| |||||||||||| ||||||||||||||||||||||  ||||| || | ||||    
T  36362013 gagtaatgatacatagacacccttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttc 36361914  T
Q  516 tcttttttcttcct 529  Q
    |||||| |||||||    
T  36361913 tcttttctcttcct 36361900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 419 - 542
Target Start/End: Original strand, 3783998 - 3784120
Alignment:
Q  419 taatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttctct 518  Q
    |||||||||||||||| | ||||||| ||||||| | ||||||| |||||||||||| ||||||||||||||||||| || |||||| || | |||||||    
T  3783998 taatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctct 3784097  T
Q  519 tttttcttcctcttctctgttcct 542  Q
    ||| || ||||||||||| |||||    
T  3784098 tttctc-tcctcttctctcttcct 3784120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 416 - 519
Target Start/End: Original strand, 21234401 - 21234504
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||||||||||||||| ||||||||||||||||| |||||||  |||||||||||||||||||||| ||| || |||| |||||| || ||||||    
T  21234401 gagttatgatacatagacatccttaggtgacaatacaccctttgacactcacacaaaaatttgacacgtagccacatgtaccccgcacaagcacattttc 21234500  T
Q  516 tctt 519  Q
    ||||    
T  21234501 tctt 21234504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 38837217 - 38837342
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||| | ||||||| ||||||||| ||  ||| | |||||||||| |||||||||||||||||||||| |||||| || | ||||    
T  38837217 gagtaatgatacatagacacccttaggtggcaatacacccttgtacacctacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 38837316  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || ||||||||||| |||||    
T  38837317 tcttttctc-tcctcttctctcttcct 38837342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 417 - 542
Target Start/End: Complemental strand, 32951592 - 32951468
Alignment:
Q  417 agtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttct 516  Q
    ||||||||||||||||||   |||| |||||||||| | ||| |||||||||||||||| | |||||||||||||||||||| |||||| || | |||||    
T  32951592 agtaatgatacatagacactcttagatgacaatacatcctttaacatccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttct 32951493  T
Q  517 cttttttcttcctcttctctgttcct 542  Q
    ||||| || ||||||||||| |||||    
T  32951492 cttttctc-tcctcttctctcttcct 32951468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 416 - 529
Target Start/End: Original strand, 36362026 - 36362139
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||| | |||||||  |||||| | ||||||| |||||||||||| ||||||||||||||||||||||  ||||| || | ||||    
T  36362026 gagtaatgatacatagacacccttaggtggtaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttc 36362125  T
Q  516 tcttttttcttcct 529  Q
    |||||| |||||||    
T  36362126 tcttttctcttcct 36362139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 410 - 541
Target Start/End: Original strand, 3694361 - 3694491
Alignment:
Q  410 aaaaaggagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacat 509  Q
    ||||| || |||||||| ||| ||| | ||||||||||||||||| ||| ||| |||||||||||| ||||||||||||| ||||| || |||||| ||     
T  3694361 aaaaatgaataatgatatatacacacccttaggtgacaatacaccttttaacacccacacaaaaatctgacacgtagtcatgtggatcccgcacaagcac 3694460  T
Q  510 attttctcttttttcttcctcttctctgttcc 541  Q
    | |||||||||| || ||||||||||| ||||    
T  3694461 actttctcttttctc-tcctcttctctcttcc 3694491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 412 - 542
Target Start/End: Complemental strand, 40846217 - 40846088
Alignment:
Q  412 aaaggagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatat 511  Q
    |||||||| |||||||||| ||||| ||||||| |||||||||  ||||||||||||||||||| | ||| ||||| |  ||||||| ||||||| | |     
T  40846217 aaaggagttatgatacataaacatccttaggtggcaatacaccccttgacatccacacaaaaatctaacatgtagttatatggaccccgcacaaatacac 40846118  T
Q  512 tttctcttttttcttcctcttctctgttcct 542  Q
    ||||||||| ||||| ||||||||| |||||    
T  40846117 tttctctttcttctt-ctcttctctcttcct 40846088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 40957707 - 40957832
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||||||||||||||||||   ||||||| ||||||||  ||||| | |||||||||||| ||||||||||||||||||| || | |||| || | ||||    
T  40957707 gagtaatgatacatagacactcttaggtggcaatacactctttgatacccacacaaaaatctgacacgtagtcacgtggatcccgtacaagcacactttc 40957806  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || || |||||||| |||||    
T  40957807 tcttttctc-tcatcttctctcttcct 40957832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 46033901 - 46033776
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||||||||||| ||  ||||||| ||||||||| ||| ||| ||||| |||||| |||||||| ||||| || || | |||||| |||||||||    
T  46033901 gagttatgatacatagatattcttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatgaactccgcacaagcatattttc 46033802  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || ||||||||||| |||||    
T  46033801 tcttttctc-tcctcttctctattcct 46033776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 403 - 542
Target Start/End: Original strand, 8238199 - 8238338
Alignment:
Q  403 ctattttaaaaaggagtaatgatacatagacatctt-taggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgc 501  Q
    ||||||| |||| |||| |||||||||| ||| | | |||||| ||||||||| ||||||| |||||||||||| ||||| |||||||  ||||||| ||    
T  8238199 ctatttttaaaatgagttatgatacataaacaccctgtaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcatatggaccccgc 8238298  T
Q  502 acaaacatattttctcttttttcttcctcttctctgttcct 542  Q
    ||||  | | ||||||||| ||||| ||||||||| |||||    
T  8238299 acaagtacactttctctttcttctt-ctcttctctcttcct 8238338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 416 - 536
Target Start/End: Original strand, 26296644 - 26296763
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||||||||||||||| ||||||||||||| ||| ||| ||||||||| |||||| ||| |||| | ||  ||||||| |||||| |  ||||||    
T  26296644 gagttatgatacatagacatccttaggtgacaatataccctttaacatccacataaaaatctgatacgtggccatatggaccccgcacaagcgcattttc 26296743  T
Q  516 tcttttttcttcctcttctct 536  Q
    |||||| || |||||||||||    
T  26296744 tcttttctc-tcctcttctct 26296763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 409 - 520
Target Start/End: Complemental strand, 35468962 - 35468851
Alignment:
Q  409 taaaaaggagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaaca 508  Q
    |||||| ||||||||||||||||||||| |||| || ||||||| ||||||||| ||||| |||||| | | | ||   || ||||||||||||||||||    
T  35468962 taaaaaagagtaatgatacatagacatccttagatggcaatacatcatttgacacccacataaaaatctaatatgtgaccatgtggaccctgcacaaaca 35468863  T
Q  509 tattttctcttt 520  Q
     | |||||||||    
T  35468862 cactttctcttt 35468851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 36208173 - 36208298
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||||||||||||| | |||||||  ||||||    |||||| |||||||||||  ||||| || |||||||||||||||||||| || ||||||    
T  36208173 gagttatgatacatagacacccttaggtggtaatacattcattgacacccacacaaaaagctgacatgtggtcacgtggaccctgcacaagcacattttc 36208272  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||  || ||||||||||| |||||    
T  36208273 tctttcctc-tcctcttctctcttcct 36208298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 421 - 542
Target Start/End: Original strand, 35522881 - 35523001
Alignment:
Q  421 atgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttctcttt 520  Q
    |||||||||||||||| ||| ||| ||||||||||||| ||| |||||||||||| |||||||| | ||  |||| || |||||| || | |||||||||    
T  35522881 atgatacatagacatccttaagtggcaatacaccatttaacacccacacaaaaatctgacacgtggccatatggatcccgcacaagcacactttctcttt 35522980  T
Q  521 tttcttcctcttctctgttcct 542  Q
    | || || |||||||| |||||    
T  35522981 tctc-tcttcttctctcttcct 35523001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 416 - 505
Target Start/End: Complemental strand, 46374902 - 46374813
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaa 505  Q
    |||| |||||||||||||||| ||||||| ||| ||||| ||| ||| |||||||||||| |||||||| | ||| ||||||| ||||||    
T  46374902 gagttatgatacatagacatccttaggtggcaacacaccctttaacacccacacaaaaatctgacacgtggccacatggaccccgcacaa 46374813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 416 - 527
Target Start/End: Original strand, 38044197 - 38044308
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||||||||| ||| | ||||||| |||||||||  ||||||||||||||||||| ||||| |||| ||  ||||||| ||||||  | | ||||    
T  38044197 gagttatgatacataaacacccttaggtggcaatacaccccttgacatccacacaaaaatctgacatgtagccatatggaccccgcacaagtacactttc 38044296  T
Q  516 tcttttttcttc 527  Q
    ||||| ||||||    
T  38044297 tctttcttcttc 38044308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 32564526 - 32564401
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||||||||| ||||  ||||||| |||||||||  |||||| |||||||||||| ||||| || |  |  ||||||| ||||||| | | ||||    
T  32564526 gagttatgatacataaacattcttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggctatatggaccccgcacaaatacactttc 32564427  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    ||||| ||||| ||||||||| |||||    
T  32564426 tctttcttctt-ctcttctctcttcct 32564401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 41423682 - 41423807
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||||||||||||||| |||| ||  ||||||||  ||||||   |||||||||| ||||| || ||||||| || || | |||| |||||||||    
T  41423682 gagttatgatacatagacatcattagatggtaatacacctcttgacacttacacaaaaatctgacatgtggtcacgtagatcccgtacaagcatattttc 41423781  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||  || ||||||||||| |||||    
T  41423782 tctttcatc-tcctcttctctcttcct 41423807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 39256023 - 39255955
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgt 484  Q
    |||| |||||||||||||| | ||||||| |||||||||| |||| | ||| |||||||| ||||||||    
T  39256023 gagttatgatacatagacaaccttaggtggcaatacaccacttgatacccatacaaaaatctgacacgt 39255955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 482
Target Start/End: Complemental strand, 10343663 - 10343597
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacac 482  Q
    ||||||||||||||||||| | |||||||  |||||||   |||||| |||||||||||| ||||||    
T  10343663 gagtaatgatacatagacacccttaggtggaaatacacatcttgacacccacacaaaaatctgacac 10343597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 457 - 495
Target Start/End: Complemental strand, 16374883 - 16374845
Alignment:
Q  457 ttgacatccacacaaaaatttgacacgtagtcacgtgga 495  Q
    ||||||||||||||||||| |||||||| ||||||||||    
T  16374883 ttgacatccacacaaaaatctgacacgtggtcacgtgga 16374845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 18207180 - 18207304
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||||||||||||| | ||||||| |||||||||  |||||| ||| |||||||| | |||||| | |||||| ||||  ||||| || | ||||    
T  18207180 gagttatgatacatagacaaccttaggtggcaatacacctcttgacacccatacaaaaatctaacacgt-ggcacgtgaaccccacacaagcacactttc 18207278  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||  || ||||||||||| |||||    
T  18207279 tctttcatc-tcctcttctctcttcct 18207304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 22343361 - 22343486
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||||||||| ||| | ||||||| |||||||||  |||||| |||||||||||| ||||| ||   ||  ||||||| ||||||  | | ||||    
T  22343361 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacactttc 22343460  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    ||||| ||||| ||||||||| |||||    
T  22343461 tctttcttctt-ctcttctctcttcct 22343486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 472
Target Start/End: Original strand, 31735884 - 31735940
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaa 472  Q
    |||| |||||||||||||||| ||||||| ||||||||  ||| ||| |||||||||    
T  31735884 gagttatgatacatagacatccttaggtggcaatacactctttaacacccacacaaa 31735940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 83; Significance: 5e-39; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 416 - 534
Target Start/End: Original strand, 15832577 - 15832694
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||| ||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||| |||||||||| | ||||||    
T  15832577 gagtaatgatacatagacacctttaggtgacaataaatcatttgacacccacacaaaaatttgacacgtagtcacgtggatcctgcacaaatacattttc 15832676  T
Q  516 tcttttttcttcctcttct 534  Q
    ||||||||| |||||||||    
T  15832677 tcttttttc-tcctcttct 15832694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 404 - 542
Target Start/End: Original strand, 17598542 - 17598679
Alignment:
Q  404 tattttaaaaaggagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcac 503  Q
    |||||| |||| ||||||||||||||||||| | ||||||| ||||||| | ||||||| |||||||||||| |||||||| ||||||||||||| ||||    
T  17598542 tattttgaaaatgagtaatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgttgtcacgtggaccccgcac 17598641  T
Q  504 aaacatattttctcttttttcttcctcttctctgttcct 542  Q
    || || | |||||||||| || ||||||||||| |||||    
T  17598642 aagcacactttctcttttctc-tcctcttctctcttcct 17598679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 32869678 - 32869803
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||||| |||||||||||| | ||||||| ||||||||| ||||||| |||||||||||| |||||||||||||||||||||| |||||| || | ||||    
T  32869678 gagtaaagatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 32869777  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || ||||||||||| |||||    
T  32869778 tcttttctc-tcctcttctctcttcct 32869803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 419 - 542
Target Start/End: Complemental strand, 22880755 - 22880633
Alignment:
Q  419 taatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttctct 518  Q
    |||||||||||||||| | ||||||| ||||||||| ||||||| |||||||||| | |||||||||||||||||||||| |||||| || | |||||||    
T  22880755 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcacactttctct 22880656  T
Q  519 tttttcttcctcttctctgttcct 542  Q
    ||| || ||||||||||| |||||    
T  22880655 tttctc-tcctcttctctcttcct 22880633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 6209565 - 6209440
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||| | ||||||| |||||||| ||||||||  ||||||||||| || ||||||||||||||||||| |||| | || | ||||    
T  6209565 gagtaatgatacatagacacccttaggtggcaatacactatttgacactcacacaaaaatctgtcacgtagtcacgtggaccccgcactagcacactttc 6209466  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || ||||||||||| |||||    
T  6209465 tcttttctc-tcctcttctctcttcct 6209440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 415 - 542
Target Start/End: Original strand, 29857826 - 29857952
Alignment:
Q  415 ggagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatatttt 514  Q
    |||||||||||||||||||| |||||| || ||||||||| ||| ||| |||||||||||| ||||||||||| ||||||| || ||| || || | |||    
T  29857826 ggagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacacttt 29857925  T
Q  515 ctcttttttcttcctcttctctgttcct 542  Q
    ||||||| |||| ||||||||| |||||    
T  29857926 ctcttttctctt-ctcttctctcttcct 29857952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 11427616 - 11427743
Alignment:
Q  416 gagtaatgatacatagacatctt--taggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattt 513  Q
    ||||||||||||||||||| | |  |||||| ||||||| | ||||||| |||||||||||| ||||||||||||||||||| || |||||| || | ||    
T  11427616 gagtaatgatacatagacaccctcttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 11427715  T
Q  514 tctcttttttcttcctcttctctgttcct 542  Q
    |||||||| || ||||||||||| |||||    
T  11427716 tctcttttctc-tcctcttctctcttcct 11427743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 416 - 498
Target Start/End: Complemental strand, 31109500 - 31109418
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccc 498  Q
    ||||||||||  ||||||| | ||||||| ||||||||| |||||||||||||||||||| |||||||||||||||| |||||    
T  31109500 gagtaatgattaatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcacgtagaccc 31109418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 31976248 - 31976373
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||||||||||||||| ||||||| ||||| ||| ||| ||| |||||||||||| |||||||| ||||| || |||| |||||| || | ||||    
T  31976248 gagttatgatacatagacatccttaggtggcaatataccctttaacacccacacaaaaatctgacacgtggtcacatgaaccccgcacaagcacactttc 31976347  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || ||||||||||| |||||    
T  31976348 tcttttctc-tcctcttctctcttcct 31976373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 419 - 542
Target Start/End: Complemental strand, 23128224 - 23128102
Alignment:
Q  419 taatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttctct 518  Q
    |||||||| ||||||| ||||| |||| |||||| | ||||||| |||||||||||| ||||||||||||||||||| ||  ||||| || | |||||||    
T  23128224 taatgatatatagacacctttatgtgataatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacactttctct 23128125  T
Q  519 tttttcttcctcttctctgttcct 542  Q
    ||| || ||||||| ||| |||||    
T  23128124 tttctc-tcctcttttctcttcct 23128102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 31110859 - 31110736
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||||||||||||||| ||||||| ||||||||| |||||||  | ||||||||| |||||||||  ||| |||||||||||||| || | ||||    
T  31110859 gagttatgatacatagacatccttaggtggcaatacaccctttgaca--ctcacaaaaatctgacacgtaaccacatggaccctgcacaagcacactttc 31110762  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || | ||||||||| |||||    
T  31110761 tcttttctc-tactcttctctcttcct 31110736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 417 - 492
Target Start/End: Original strand, 946377 - 946452
Alignment:
Q  417 agtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgt 492  Q
    ||||| |||||||||||||| |||||||| |||||||| ||||||| | || ||||||| |||||| |||||||||    
T  946377 agtaacgatacatagacatccttaggtgataatacaccctttgacacctacccaaaaatctgacacctagtcacgt 946452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 421 - 520
Target Start/End: Complemental strand, 9379807 - 9379708
Alignment:
Q  421 atgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttctcttt 520  Q
    |||||||||||||||| |||| |||||||||| |  |||||| ||| ||||||||||||||||| | || ||||| |   |||||||| |||||||||||    
T  9379807 atgatacatagacatccttagatgacaatacatcccttgacacccatacaaaaatttgacacgtggccatgtggatctcacacaaacacattttctcttt 9379708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 31953130 - 31953005
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||| ||||||||| ||||||| |||||||||  |||||| ||||| |||||| ||||| ||  ||| |||||||   |||||||| | ||||    
T  31953130 gagtaatgatagatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaaacacactttc 31953031  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||  |||| ||||||||| |||||    
T  31953030 tctttcatctt-ctcttctctcttcct 31953005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 420 - 527
Target Start/End: Complemental strand, 28536582 - 28536477
Alignment:
Q  420 aatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttctctt 519  Q
    ||||||||||| ||||| ||||||| ||||||| |  |||||| |||||||||||| |||||||  |||| ||||||||  ||||| || | ||||||||    
T  28536582 aatgatacataaacatccttaggtggcaatacaacccttgacacccacacaaaaatctgacacg--gtcatgtggaccccacacaagcacactttctctt 28536485  T
Q  520 ttttcttc 527  Q
    || |||||    
T  28536484 ttatcttc 28536477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 4231548 - 4231673
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| ||||| |||| ||||| ||||||| |||||||||  ||| || |||||||||||| |||||||| | ||  ||||||| ||||||  | | ||||    
T  4231548 gagttatgattcataaacatcattaggtggcaatacaccccttgccacccacacaaaaatctgacacgtggccatatggaccccgcacaagtacactttc 4231647  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    ||||| ||||| ||||||||| |||||    
T  4231648 tctttcttctt-ctcttctctcttcct 4231673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 15508124 - 15507999
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||||||||| ||| | ||||||| |||||||||  |||||| |||||||||||| ||||| || | ||  ||||||| ||||||  | | ||||    
T  15508124 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 15508025  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    ||||| ||||| ||||||||| |||||    
T  15508024 tctttcttctt-ctcttctctcttcct 15507999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 15990142 - 15990017
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||||||||| ||| | ||||||| |||||||||  |||||| |||||||||||| ||||| || | ||  ||||||| ||||||  | | ||||    
T  15990142 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 15990043  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    ||||| ||||| ||||||||| |||||    
T  15990042 tctttcttctt-ctcttctctcttcct 15990017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 30341460 - 30341335
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||||||||| ||| | ||||||| |||||||||  |||||| |||||||||||| ||||| || | ||  ||||||| ||||||  | | ||||    
T  30341460 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 30341361  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    ||||| ||||| ||||||||| |||||    
T  30341360 tctttcttctt-ctcttctctcttcct 30341335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 4e-36; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 413 - 542
Target Start/End: Original strand, 12831044 - 12831172
Alignment:
Q  413 aaggagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatatt 512  Q
    |||||||||||||||||||||| | ||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||||| |||||| || | |    
T  12831044 aaggagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 12831143  T
Q  513 ttctcttttttcttcctcttctctgttcct 542  Q
    ||||||||| || ||||||||||| |||||    
T  12831144 ttctcttttctc-tcctcttctctcttcct 12831172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 14547922 - 14548047
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||||| |||||||||||| | ||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||| |||||| || | ||||    
T  14547922 gagtaaagatacatagacacccttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 14548021  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || ||||||||||| |||||    
T  14548022 tcttttctc-tcctcttctctcttcct 14548047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 34012396 - 34012271
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||| | |||||||  |||||||| ||||||| |||||||||||||||||||||||||||||||| || |||||| || | ||||    
T  34012396 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttc 34012297  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || ||||||||||| |||||    
T  34012296 tcttttctc-tcctcttctctcttcct 34012271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 37038479 - 37038604
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||| ||||||||||||||||||| || |||||| || | ||||    
T  37038479 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 37038578  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    | |||  || ||||||||||| |||||    
T  37038579 tatttcctc-tcctcttctctcttcct 37038604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 40424043 - 40423918
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||| | | ||||||| ||||||||| |||||||||||||||||||| ||||||||||||| |||||||| |||||| || | ||||    
T  40424043 gagtaatgatacatagatacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttc 40423944  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || ||||||||||| |||||    
T  40423943 tcttttctc-tcctcttctctcttcct 40423918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 411 - 542
Target Start/End: Complemental strand, 504226 - 504096
Alignment:
Q  411 aaaaggagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacata 510  Q
    |||| ||||||||||||||||||| | ||||||| ||||||||| ||||||| |||||||||||| |||||||||||||||||||||| |||||| || |    
T  504226 aaaatgagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 504127  T
Q  511 ttttctcttttttcttcctcttctctgttcct 542  Q
      ||||||||| || || |||||||| |||||    
T  504126 cattctcttttctc-tcatcttctctcttcct 504096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 417 - 542
Target Start/End: Original strand, 5957831 - 5957955
Alignment:
Q  417 agtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttct 516  Q
    |||||||||||||||||||  ||||||| ||||||||| ||||||| |||||||||||| ||||||||||||||||||| || |||||| || | |||||    
T  5957831 agtaatgatacatagacattcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaatcacactttct 5957930  T
Q  517 cttttttcttcctcttctctgttcct 542  Q
    ||||  || ||||||||||| |||||    
T  5957931 ctttcctc-tcctcttctctcttcct 5957955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 416 - 521
Target Start/End: Original strand, 15197333 - 15197438
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||||||||||||||||||   ||||||| ||||||||| ||||||| |||||||||||| |||||||||||||||||||||| |||||| || | ||||    
T  15197333 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 15197432  T
Q  516 tctttt 521  Q
    ||||||    
T  15197433 tctttt 15197438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 416 - 520
Target Start/End: Complemental strand, 10284731 - 10284627
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||||||||||||| | ||| ||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||| |||||| || | ||||    
T  10284731 gagttatgatacatagacacccttaagtgacaatacactctttgacacccacacaaaaatttgacacgtagtcacgtggaccccgcacaagcacactttc 10284632  T
Q  516 tcttt 520  Q
    |||||    
T  10284631 tcttt 10284627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 15048281 - 15048156
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||||||||||||||| ||||||| ||||||||| ||||||| |||||||||||| |||||||||| ||| ||||||| |||||| || | ||||    
T  15048281 gagttatgatacatagacatccttaggtggcaatacaccctttgaca-ccacacaaaaatctgacacgtagccacatggaccccgcacaagcacactttc 15048183  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||||   ||||||||||| |||||    
T  15048182 tctttttatctcctcttctctcttcct 15048156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 23122697 - 23122572
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||| | ||| ||| ||||||||| ||||||| |||||||||||| |||||||||||||||||||||| ||| || || | ||||    
T  23122697 gagtaatgatacatagacacccttaagtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactttc 23122598  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || |||| |||||| |||||    
T  23122597 tcttttctc-tcctgttctctcttcct 23122572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 1180040 - 1179915
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||| | |||||||  |||||||| ||||||| |||||||||||| ||||||||||||| |||||  | |||||| || | ||||    
T  1180040 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcacactttc 1179941  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || ||||||||||| |||||    
T  1179940 tcttttctc-tcctcttctctcttcct 1179915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 44507187 - 44507062
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||| | |||||||  |||||||  ||| ||| |||||||||||| |||||||||||||||||||||| | |||| |||| ||||    
T  44507187 gagtaatgatacatagacacccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcatactttc 44507088  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || || |||||||| |||||    
T  44507087 tcttttctc-tcatcttctctcttcct 44507062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 421 - 542
Target Start/End: Complemental strand, 10621182 - 10621062
Alignment:
Q  421 atgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttctcttt 520  Q
    |||||||||||||||| |||||||  |||||||| ||||||| |||||||||||| |||||||||| ||| | || || |||||| || | |||||||||    
T  10621182 atgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagccacatcgatcccgcacaagcacactttctcttt 10621083  T
Q  521 tttcttcctcttctctgttcct 542  Q
    | || ||||||||||| |||||    
T  10621082 tctc-tcctcttctctcttcct 10621062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 411 - 542
Target Start/End: Complemental strand, 43414686 - 43414556
Alignment:
Q  411 aaaaggagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacata 510  Q
    |||| |||| |||||||||||||||| |||| || ||| ||||| ||||||| |||||||||||| | |||||| ||||| |||| || |||||| || |    
T  43414686 aaaatgagttatgatacatagacatccttagatggcaacacaccctttgacacccacacaaaaatctaacacgtggtcacatggatcccgcacaagcaca 43414587  T
Q  511 ttttctcttttttcttcctcttctctgttcct 542  Q
     |||||||||| || ||||||||||| |||||    
T  43414586 ctttctcttttctc-tcctcttctctcttcct 43414556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 416 - 536
Target Start/End: Complemental strand, 4854963 - 4854844
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||||| ||||||| ||||||||| ||| ||| | ||| |||||| ||| | || | ||| |||||||||||||| || | ||||    
T  4854963 gagtaatgatacatagacatccttaggtggcaatacaccctttaacacctacataaaaatctgatatgtggccacatggaccctgcacaagcacactttc 4854864  T
Q  516 tcttttttcttcctcttctct 536  Q
    |||||| || |||||||||||    
T  4854863 tcttttctc-tcctcttctct 4854844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 438 - 542
Target Start/End: Complemental strand, 8841510 - 8841407
Alignment:
Q  438 ttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttctcttttttcttcctcttctctg 537  Q
    ||||||| || |||||| ||||||| |||||||||||| | |||||||||||||||||||| |||||| || | |||||||||  || |||||||||||     
T  8841510 ttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctctttcctc-tcctcttctctt 8841412  T
Q  538 ttcct 542  Q
    |||||    
T  8841411 ttcct 8841407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 416 - 498
Target Start/End: Complemental strand, 14055692 - 14055610
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccc 498  Q
    |||| ||||||||| |||| | ||||||||||||||||   ||||||||||||||||||| | ||| ||||||||||||||||    
T  14055692 gagttatgatacattgacacccttaggtgacaatacactccttgacatccacacaaaaatcttacatgtagtcacgtggaccc 14055610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 20075034 - 20074966
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgt 484  Q
    ||||||||||||||||||||| ||||||| ||||||||  ||||||| ||||| |||||| ||||||||    
T  20075034 gagtaatgatacatagacatccttaggtggcaatacactctttgacacccacataaaaatgtgacacgt 20074966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 459 - 542
Target Start/End: Complemental strand, 15258986 - 15258904
Alignment:
Q  459 gacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttctcttttttcttcctcttctctgttcct 542  Q
    |||||||||| |||||| ||||| || |||||||||||||||||||| || |||||||||||  || ||||||||||| |||||    
T  15258986 gacatccacataaaaatctgacatgtggtcacgtggaccctgcacaagcacattttctctttcctc-tcctcttctctcttcct 15258904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 481
Target Start/End: Complemental strand, 30479580 - 30479509
Alignment:
Q  410 aaaaaggagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgaca 481  Q
    |||||||||| |||||||||| ||| | ||||||| ||||||||| ||||||||||||| |||||| |||||    
T  30479580 aaaaaggagttatgatacataaacacccttaggtggcaatacaccctttgacatccacataaaaatctgaca 30479509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 416 - 541
Target Start/End: Original strand, 17443825 - 17443949
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||||||||||||| | ||||||||||||||||   || |||  ||||||||||| ||||| ||||||| ||||||||  |||||| | | ||||    
T  17443825 gagttatgatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaagacactttc 17443924  T
Q  516 tcttttttcttcctcttctctgttcc 541  Q
    |||||  |||| ||||||||| ||||    
T  17443925 tctttcatctt-ctcttctctcttcc 17443949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 410 - 542
Target Start/End: Complemental strand, 16056507 - 16056376
Alignment:
Q  410 aaaaaggagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacat 509  Q
    ||||| |||| |||||||||| ||||| ||| ||||||||||| |  |||||| |||||||||||| ||||| || | ||  ||||||| ||||||  |     
T  16056507 aaaaaagagttatgatacataaacatccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtac 16056408  T
Q  510 attttctcttttttcttcctcttctctgttcct 542  Q
    | ||||||||| ||||| ||||||||| |||||    
T  16056407 actttctctttcttctt-ctcttctctcttcct 16056376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 410 - 542
Target Start/End: Original strand, 16383371 - 16383502
Alignment:
Q  410 aaaaaggagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacat 509  Q
    ||||| |||| |||||||||| ||| | ||||||| |||||||||  |||||| |||||||||||| ||||| || | ||  ||||||| ||||||  |     
T  16383371 aaaaaagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtac 16383470  T
Q  510 attttctcttttttcttcctcttctctgttcct 542  Q
    | ||||||||| ||||| ||||||||| |||||    
T  16383471 actttctctttcttctt-ctcttctctcttcct 16383502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 464 - 542
Target Start/End: Original strand, 9122233 - 9122310
Alignment:
Q  464 ccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttctcttttttcttcctcttctctgttcct 542  Q
    |||||||||||| ||||| ||||||||||||| || |||||| || | |||||||||| || ||||||||||| |||||    
T  9122233 ccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttctcttttctc-tcctcttctctcttcct 9122310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 498
Target Start/End: Original strand, 42221515 - 42221597
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccc 498  Q
    ||||||||||||||| ||||| |||||||||||||||    | |||| |||||||||||| ||||||||| |||  |||||||    
T  42221515 gagtaatgatacatatacatccttaggtgacaatacattcctggacacccacacaaaaatctgacacgtaatcatatggaccc 42221597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 34307216 - 34307341
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||||||||| ||| | ||||||| |||||||||  |||||| |||||||||||| ||||| || | ||  || |||| ||||||  | | ||||    
T  34307216 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggacatatgaaccccgcacaagtacactttc 34307315  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    ||||| ||||| ||||||||| |||||    
T  34307316 tctttcttctt-ctcttctctcttcct 34307341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 7e-35; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 410 - 521
Target Start/End: Complemental strand, 8346494 - 8346383
Alignment:
Q  410 aaaaaggagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacat 509  Q
    ||||| |||||||||||||||| || ||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||     
T  8346494 aaaaaagagtaatgatacatagtcacctttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccctgcacaagcac 8346395  T
Q  510 attttctctttt 521  Q
    | ||||||||||    
T  8346394 actttctctttt 8346383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 9474976 - 9474851
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||| | ||||||| ||||||||| ||||||| |||||||||||| |||||||||||||||||||||| ||||||||| | ||||    
T  9474976 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaaacacactttc 9474877  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || ||||||||||| |||||    
T  9474876 tcttttctc-tcctcttctctcttcct 9474851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 48716382 - 48716257
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||| | ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| || | |||     
T  48716382 gagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttta 48716283  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| | |||||||||||| |||||    
T  48716282 tcttttct-ttcctcttctctcttcct 48716257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 419 - 542
Target Start/End: Complemental strand, 44548473 - 44548351
Alignment:
Q  419 taatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttctct 518  Q
    |||||||||||||||||||||||||| ||||||||||||||| | |||||||||||| |||||||||||||||||||||| |||||| || | |||||||    
T  44548473 taatgatacatagacatctttaggtggcaatacaccatttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 44548374  T
Q  519 tttttcttcctcttctctgttcct 542  Q
    ||| || || |||||||| |||||    
T  44548373 tttctc-tcttcttctctcttcct 44548351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 27564835 - 27564710
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||||| ||||||| ||||||||| ||||||| |||||||||||| ||||||||| |||||||||||| |||||| || | ||||    
T  27564835 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttc 27564736  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || ||||||||||| |||||    
T  27564735 tcttttctc-tcctcttctctcttcct 27564710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 2581915 - 2582040
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||| | ||||||| ||||||||| ||||||| |||||||||||| |||||||||||||||||||||| |||||| || | ||||    
T  2581915 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 2582014  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    | |||| || ||||||||||| |||||    
T  2582015 ttttttctc-tcctcttctctcttcct 2582040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 38632421 - 38632296
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||| | ||||||| ||||||||| ||| |||||||||||||||| |||||||||||||||||||||| |||||| || | |||     
T  38632421 gagtaatgatacatagacacccttaggtggcaatacaccttttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttt 38632322  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || ||||||||||| |||||    
T  38632321 tcttttctc-tcctcttctctcttcct 38632296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 51898783 - 51898658
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||| ||||||||||||||||||| || |||||| || | ||||    
T  51898783 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 51898684  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    | |||  || ||||||||||| |||||    
T  51898683 tatttcctc-tcctcttctctcttcct 51898658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 411 - 542
Target Start/End: Original strand, 38595149 - 38595279
Alignment:
Q  411 aaaaggagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacata 510  Q
    |||| ||||||||||||||| ||| ||||||||| ||||||||| ||||||| |||||||||||| |||||||||||||||||||||| | |||| || |    
T  38595149 aaaaagagtaatgatacataaacacctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcaca 38595248  T
Q  511 ttttctcttttttcttcctcttctctgttcct 542  Q
     |||||||||| || || |||||||| |||||    
T  38595249 ctttctcttttctc-tcatcttctctcttcct 38595279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 41758805 - 41758930
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||| | |||  || ||||||||| ||||||| |||||||||||| |||||||||||||| ||||||| ||||||||| | ||||    
T  41758805 gagtaatgatacatagacaccattaaatggcaatacaccctttgacaaccacacaaaaatctgacacgtagtcacatggaccccgcacaaacacactttc 41758904  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || ||||||||||| |||||    
T  41758905 tcttttctc-tcctcttctctcttcct 41758930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 3000319 - 3000444
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||| ||| | ||||||| ||||||||| ||||||| |||||||||||| |||||||||||||||||||||| | |||| || | ||||    
T  3000319 gagtaatgatacataaacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 3000418  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || || |||||||| |||||    
T  3000419 tcttttctc-tcatcttctctcttcct 3000444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 32813247 - 32813372
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||||||||||||||| ||||||| ||||||||| ||| ||| |||||||||||| |||||||| ||||| ||||||| |||||| || | ||||    
T  32813247 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccgcacaagcacactttc 32813346  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || ||||||||||| |||||    
T  32813347 tcttttctc-tcctcttctctcttcct 32813372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 47452420 - 47452295
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||| | |||||||  |||||||| ||||||| |||||||||||| | ||||||||||||||||| || |||||| || | ||||    
T  47452420 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcacactttc 47452321  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || ||||||||||| |||||    
T  47452320 tcttttctc-tcctcttctctcttcct 47452295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 49811627 - 49811502
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||  | ||| | |||||| || | ||||    
T  49811627 gagttatgatagatagacatccttaggtgacaatacaccatttgacatccacacaaaaatctgacacgtagccatatagactccgcacaagcacactttc 49811528  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || ||||||||||| |||||    
T  49811527 tcttttctc-tcctcttctctcttcct 49811502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 415 - 521
Target Start/End: Original strand, 43131 - 43237
Alignment:
Q  415 ggagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatatttt 514  Q
    ||||||||||||||||||||   ||||| ||||||||| | ||||||| |||||||||||| |||||||||||||||||||| | |||||| || | |||    
T  43131 ggagtaatgatacatagacagtcttaggagacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggactccgcacaagcacacttt 43230  T
Q  515 ctctttt 521  Q
    |||||||    
T  43231 ctctttt 43237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 37649198 - 37649323
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||||||||||||| ||||||||  ||||||| |||||||||||| |||||||| |||||||| |  | |||||| || | ||||    
T  37649198 gagtaatgatacatagacatctttaggtggcaatacactctttgacacccacacaaaaatctgacacgtggtcacgtgaattccgcacaagcacactttc 37649297  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
     ||||| || ||||||||||| |||||    
T  37649298 ccttttctc-tcctcttctctcttcct 37649323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 45044660 - 45044535
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||||||||| |  || ||||||| ||||||||||||||||| ||| |||||||| ||||| |||| ||| ||||||| ||||||||| ||||||    
T  45044660 gagttatgatacatacatttccttaggtggcaatacaccatttgacacccatacaaaaatctgacatgtagccacatggaccccgcacaaacacattttc 45044561  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| |||| ||||||||| |||||    
T  45044560 tcttttctctt-ctcttctctcttcct 45044535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 50630458 - 50630583
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||| | | ||||||| ||||||| | ||||  | |||||||||||| |||||||||||||||||||||| |||||| || | ||||    
T  50630458 gagtaatgatacatagatacccttaggtggcaatacatcctttgttacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 50630557  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || ||||||||||| |||||    
T  50630558 tcttttctc-tcctcttctctcttcct 50630583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 419 - 505
Target Start/End: Original strand, 26274435 - 26274521
Alignment:
Q  419 taatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaa 505  Q
    |||||||||||||||| | ||| ||| ||||||| ||||||||||||||| |||||| |||||| |||||||||||| |||||||||    
T  26274435 taatgatacatagacacccttatgtggcaatacatcatttgacatccacagaaaaatctgacacatagtcacgtggatcctgcacaa 26274521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 442 - 521
Target Start/End: Original strand, 13414787 - 13414866
Alignment:
Q  442 gtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttctctttt 521  Q
    ||||||||||||| ||||||| |||||||||||| | ||||||||||||||||||||  ||||| || ||||||||||||    
T  13414787 gtgacaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacattttctctttt 13414866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 23597191 - 23597066
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||||| ||||||| ||||||||  ||||| | ||||| |||||| |||||||| | ||||| |||| |||||||||| | |||     
T  23597191 gagtaatgatacatagacatcattaggtggcaatacactctttgatacccacataaaaatctgacacgtggccacgttgaccttgcacaaacacacttta 23597092  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || |||| |||||| |||||    
T  23597091 tcttttctc-tcctattctctattcct 23597066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 417 - 505
Target Start/End: Complemental strand, 11152476 - 11152389
Alignment:
Q  417 agtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaa 505  Q
    |||||||| ||||||||| ||| ||||| ||||||||| || ||||||||||||||||| ||||||||||||| || ||||| ||||||    
T  11152476 agtaatgaaacatagacacctt-aggtggcaatacacccttcgacatccacacaaaaatctgacacgtagtcatgtagaccccgcacaa 11152389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 411 - 542
Target Start/End: Complemental strand, 5959105 - 5958975
Alignment:
Q  411 aaaaggagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacata 510  Q
    |||| |||| |||||||||| ||| | ||| ||| |||||||||  |||||| |||||||||||| ||||| || ||||  ||||||| ||||||  | |    
T  5959105 aaaaagagttatgatacataaacacccttaagtggcaatacacctcttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtaca 5959006  T
Q  511 ttttctcttttttcttcctcttctctgttcct 542  Q
     ||||||||| ||||| ||||||||| |||||    
T  5959005 ctttctctttcttctt-ctcttctctcttcct 5958975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 457 - 508
Target Start/End: Complemental strand, 44334229 - 44334178
Alignment:
Q  457 ttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaaca 508  Q
    ||||||||||||||||||  |||||||||||||| ||||||| |||||||||    
T  44334229 ttgacatccacacaaaaacctgacacgtagtcacatggacccagcacaaaca 44334178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 423 - 521
Target Start/End: Original strand, 26440741 - 26440839
Alignment:
Q  423 gatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttctctttt 521  Q
    |||| ||||||||| |||| |||||||||||| ||| ||| |||||||||||| |||||||| | ||| |||| || ||| || || | ||||||||||    
T  26440741 gatagatagacatccttagatgacaatacaccctttaacacccacacaaaaatctgacacgtggccacatggatcccgcataagcacactttctctttt 26440839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 37926538 - 37926413
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||||||||||| ||||||||||| ||||||| | ||| ||| ||||| |||||| |||||||| | ||| |||| || | ||||  | | ||||    
T  37926538 gagttatgatacatagatatctttaggtggcaatacatcttttaacacccacataaaaatctgacacgtggccacatggatcccgtacaagtacactttc 37926439  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| |||| ||||||||| |||||    
T  37926438 tcttttctctt-ctcttctctcttcct 37926413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 50591100 - 50590975
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||||||||| ||| | ||||||| |||||||||  |||||| |||||||||||| ||||| || | ||  ||||||| ||||||  | | ||||    
T  50591100 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 50591001  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    ||||| ||||| ||||||||| |||||    
T  50591000 tctttcttctt-ctcttctctcttcct 50590975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 459 - 542
Target Start/End: Original strand, 48489343 - 48489425
Alignment:
Q  459 gacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttctcttttttcttcctcttctctgttcct 542  Q
    ||||||||||||||||| ||||| || |||||||||| || |||||| || ||||||| |||| ||  |||||||||| |||||    
T  48489343 gacatccacacaaaaatctgacatgtggtcacgtggatcccgcacaagcacattttctattttctc-acctcttctctcttcct 48489425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 41608593 - 41608468
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||||||||| ||||| ||||||| |||||||||  ||||||  ||||||||||| ||||| || | ||  ||||||| | ||||  | | ||||    
T  41608593 gagttatgatacataaacatccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgtacaagtacactttc 41608494  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    ||||| ||||| ||||||||| |||||    
T  41608493 tctttcttctt-ctcttctctcttcct 41608468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 3e-34; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 6679698 - 6679823
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||||||||||||||||||||||| ||||||||| ||||||| |||||||||||| |||||||| ||||| ||||||| ||||||||| ||||||    
T  6679698 gagttatgatacatagacatctttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacattttc 6679797  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || ||||||||||| |||||    
T  6679798 tcttttctc-tcctcttctctcttcct 6679823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 40145407 - 40145532
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||| | ||||||| ||||||||| ||| |||||||||||||||| |||||||||||||||||||||| |||||| || | ||||    
T  40145407 gagtaatgatacatagacacccttaggtggcaatacaccctttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 40145506  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || ||||||||||| |||||    
T  40145507 tcttttctc-tcctcttctctcttcct 40145532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 410 - 542
Target Start/End: Complemental strand, 18520990 - 18520859
Alignment:
Q  410 aaaaaggagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacat 509  Q
    ||||| || |||||||||||||||| | ||||||| ||||||||| ||||||| |||||||||||| |||||||||||||||||||||| |||||| ||     
T  18520990 aaaaaagaataatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcac 18520891  T
Q  510 attttctcttttttcttcctcttctctgttcct 542  Q
    | |||||||||| || ||||||||||| |||||    
T  18520890 actttctcttttatc-tcctcttctctcttcct 18520859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 2740274 - 2740399
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||||| ||||||| ||||||||| ||||||| |||||||||||| ||||||||||||||||||| || |||||| || | ||||    
T  2740274 gagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 2740373  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || ||| ||||||| |||||    
T  2740374 tcttttctc-tccccttctctcttcct 2740399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 33149738 - 33149613
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||| | |||||||  |||||||| ||||||| |||||||||||||||||||||||||||||||| || |||||| || | ||||    
T  33149738 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttc 33149639  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || ||||||||||| |||||    
T  33149638 tcttttctc-tcctcttctctcttcct 33149613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 13811652 - 13811777
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||||| |||||||||||| | ||||||| ||||||| ||||||||| |||||||||||| |||||||||||||||||||||| |||||| || | ||||    
T  13811652 gagtaaagatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 13811751  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||| | || ||||||||||| |||||    
T  13811752 tcttctctc-tcctcttctctcttcct 13811777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 28177775 - 28177900
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||||||||||||||| ||||||| ||||||||| ||||||| |||||||||||| |||||||| ||||| ||||||| ||||||||| | ||||    
T  28177775 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacactttc 28177874  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || |||||||| || |||||    
T  28177875 tcttttctc-tcctcttccctcttcct 28177900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 36733042 - 36732917
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||| | ||||||  ||||||||| ||||||| |||||||||||| |||||| ||||||||||||||| |||||| || | ||||    
T  36733042 gagtaatgatacatagacacccttaggtagcaatacaccctttgacacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcacactttc 36732943  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || ||||||||||| |||||    
T  36732942 tcttttctc-tcctcttctctcttcct 36732917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 411 - 542
Target Start/End: Original strand, 14831809 - 14831939
Alignment:
Q  411 aaaaggagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacata 510  Q
    |||| |||||||||||||||||||   ||||||| ||||||||| ||||||| ||||| |||||| ||||||||||||||||||| || |||||| || |    
T  14831809 aaaatgagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcaca 14831908  T
Q  511 ttttctcttttttcttcctcttctctgttcct 542  Q
     ||||| ||||||| ||||||||||| |||||    
T  14831909 ctttcttttttttc-tcctcttctctcttcct 14831939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 35785199 - 35785324
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||| | ||||||| ||||||||| ||||||| |||||||||||| ||||||||||| ||||||| || |||||| || | ||||    
T  35785199 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggatcccgcacaatcacactttc 35785298  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || || |||||||| |||||    
T  35785299 tcttttctc-tcatcttctctcttcct 35785324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 42414402 - 42414277
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||| |  |||||| ||||||||| ||||||| |||||||||||| ||||||||||||| |||||||| |||||| || | |||     
T  42414402 gagtaatgatacatagacaccagtaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacacttta 42414303  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| | |||||||||||| |||||    
T  42414302 tcttttct-ttcctcttctctcttcct 42414277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 15409710 - 15409585
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||||||||||||||| |||||||||||||||   ||||||| |||||||||||| |||||||||| ||| ||||||| |||||| || | | ||    
T  15409710 gagttatgatacatagacatccttaggtgacaatacattctttgacacccacacaaaaatctgacacgtagccacatggaccccgcacaagcacactctc 15409611  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || ||||||||||| |||||    
T  15409610 tcttttctc-tcctcttctctcttcct 15409585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 414 - 520
Target Start/End: Complemental strand, 35943994 - 35943888
Alignment:
Q  414 aggagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattt 513  Q
    |||||| |||||||||||||| | ||||||| ||||||| ||||||||| |||||||||||| ||||||||||| ||||||| ||  ||||| || | ||    
T  35943994 aggagttatgatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagttacgtggatcccacacaagcacactt 35943895  T
Q  514 tctcttt 520  Q
    |||||||    
T  35943894 tctcttt 35943888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 26720516 - 26720641
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||||||||||||||| ||||||| ||||||||| ||| ||| | ||| |||||| |||||||| | ||| |||| || |||||| || | ||||    
T  26720516 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttc 26720615  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| |||| ||||||||| |||||    
T  26720616 tcttttctctt-ctcttctctcttcct 26720641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 26990265 - 26990390
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||||||||||||||| ||||||| ||||||||| ||| ||| | ||| |||||| |||||||| | ||| |||| || |||||| || | ||||    
T  26990265 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttc 26990364  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| |||| ||||||||| |||||    
T  26990365 tcttttctctt-ctcttctctcttcct 26990390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 31008988 - 31009113
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||||||||| ||||| |||||||||||||||   ||  ||| |||||||||||| ||||||||||||||||||| || |||||| || | ||||    
T  31008988 gagttatgatacataaacatccttaggtgacaatacattcttccacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 31009087  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    | |||  |||| ||||||||| |||||    
T  31009088 tatttcctctt-ctcttctctcttcct 31009113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 417 - 542
Target Start/End: Complemental strand, 36875702 - 36875587
Alignment:
Q  417 agtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttct 516  Q
    |||||||||||||||||| | ||||||| ||||||||| ||||||| |||||||||||         |||||||||||| || |||||| || | |||||    
T  36875702 agtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaa---------tagtcacgtggatcccgcacaagcacactttct 36875612  T
Q  517 cttttttcttcctcttctctgttcct 542  Q
    |||||||| ||||||||||| |||||    
T  36875611 cttttttc-tcctcttctctcttcct 36875587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 416 - 505
Target Start/End: Complemental strand, 41470516 - 41470427
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaa 505  Q
    ||||||| ||||||||||| ||||||||| ||||||| | ||| | || || | |||||| |||||||||||||||||||||| ||||||    
T  41470516 gagtaataatacatagacacctttaggtggcaatacatcctttaaaattcatataaaaatctgacacgtagtcacgtggaccccgcacaa 41470427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 2252268 - 2252143
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||||||||| ||||| ||||||| |||||||||  |||||| |||||||||||| ||||| || | ||  ||||||| ||||||  | | ||||    
T  2252268 gagttatgatacataaacatccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 2252169  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    ||||| ||||| ||||||||| |||||    
T  2252168 tctttcttctt-ctcttctctcttcct 2252143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 20073616 - 20073491
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||| ||||||||| |||| |||||||||||| |||||||  |||| |||||| |  |||||   |||||||||||||||||| || | ||||    
T  20073616 gagtaatgatatatagacatcattagatgacaatacaccctttgacactcacataaaaatcttgcacgtgaccacgtggaccctgcacaagcacactttc 20073517  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    | |||  || ||||||||||| |||||    
T  20073516 tatttcctc-tcctcttctctcttcct 20073491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 414 - 542
Target Start/End: Complemental strand, 33825426 - 33825299
Alignment:
Q  414 aggagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattt 513  Q
    |||||||||||| |||||||||  ||||||| ||||||||   |||||| ||||| |||||| ||||||||  ||| ||| ||| | ||||| || | ||    
T  33825426 aggagtaatgatgcatagacattcttaggtggcaatacactccttgacacccacataaaaatctgacacgtgttcatgtgaaccttacacaagcacactt 33825327  T
Q  514 tctcttttttcttcctcttctctgttcct 542  Q
    |||||||| |||| ||||||||| |||||    
T  33825326 tctcttttatctt-ctcttctctcttcct 33825299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 462 - 521
Target Start/End: Original strand, 31132390 - 31132449
Alignment:
Q  462 atccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttctctttt 521  Q
    |||||||||||||| ||||| |||||||||||||||| |||||| |||| ||| ||||||    
T  31132390 atccacacaaaaatctgacaagtagtcacgtggaccccgcacaagcatactttttctttt 31132449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 3921365 - 3921240
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||||||||| ||| | ||||||| |||||||||  |||||| |||||||||||| ||||| || | ||  ||||||| ||||||  | | ||||    
T  3921365 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 3921266  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    ||||| ||||| ||||||||| |||||    
T  3921265 tctttcttctt-ctcttctctcttcct 3921240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 464 - 520
Target Start/End: Original strand, 21370052 - 21370108
Alignment:
Q  464 ccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttctcttt 520  Q
    |||| ||||||| ||||| || ||||||||||||| ||||||||| |||||||||||    
T  21370052 ccactcaaaaatctgacatgtggtcacgtggaccccgcacaaacacattttctcttt 21370108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 497
Target Start/End: Complemental strand, 6260101 - 6260020
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggacc 497  Q
    ||||||||||||||| ||| |  |||||||||||||||| ||| ||| |||| ||||||| | |||| | ||||| ||||||    
T  6260101 gagtaatgatacatacacaaccataggtgacaatacaccctttaacacccacgcaaaaatctaacacatggtcacatggacc 6260020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 3e-34; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 41236347 - 41236472
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||| | ||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||| || | ||||    
T  41236347 gagtaatgatacatagacacccttaggtggcaatacaccttttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 41236446  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || ||||||||||| |||||    
T  41236447 tcttttctc-tcctcttctctcttcct 41236472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 410 - 542
Target Start/End: Complemental strand, 480553 - 480422
Alignment:
Q  410 aaaaaggagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacat 509  Q
    ||||| ||||||||||||||||||| | ||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||||| | |||| ||     
T  480553 aaaaaagagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcac 480454  T
Q  510 attttctcttttttcttcctcttctctgttcct 542  Q
    | |||||||||| || ||||||||||| |||||    
T  480453 actttctcttttctc-tcctcttctctcttcct 480422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 410 - 542
Target Start/End: Complemental strand, 50052534 - 50052403
Alignment:
Q  410 aaaaaggagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacat 509  Q
    ||||| ||||||||||||||||||||| ||||||| ||||||||| ||||||| |||||||||||| |||||||||||||||||||||| |||||| ||     
T  50052534 aaaaaagagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcac 50052435  T
Q  510 attttctcttttttcttcctcttctctgttcct 542  Q
    | |||||||||  || ||||||||||| |||||    
T  50052434 actttctctttcctc-tcctcttctctcttcct 50052403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 54473633 - 54473508
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||| |||||| || | |||     
T  54473633 gagtaatgatacatagacacccttaggtgacaatacaccatttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacacttta 54473534  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || ||||||||||| |||||    
T  54473533 tcttttctc-tcctcttctctcttcct 54473508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 29239886 - 29240011
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||| | ||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||  ||||| || | ||||    
T  29239886 gagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacactttc 29239985  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||  || ||||||||||| |||||    
T  29239986 tctttcctc-tcctcttctctcttcct 29240011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 416 - 536
Target Start/End: Complemental strand, 11511562 - 11511443
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||| | ||||||| ||||||||| ||||||| ||||| |||||| |||||||||||||||||||||| |||||| || | ||||    
T  11511562 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 11511463  T
Q  516 tcttttttcttcctcttctct 536  Q
    |||||| |||| |||||||||    
T  11511462 tcttttctctt-ctcttctct 11511443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 416 - 536
Target Start/End: Complemental strand, 48183149 - 48183030
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||| | ||| ||| ||||||||| ||||||| |||||||||||| |||||||||||||||||||||| |||||| || | ||||    
T  48183149 gagtaatgatacatagacacccttacgtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 48183050  T
Q  516 tcttttttcttcctcttctct 536  Q
    |||||| || |||||||||||    
T  48183049 tcttttctc-tcctcttctct 48183030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 407 - 542
Target Start/End: Complemental strand, 42044476 - 42044342
Alignment:
Q  407 tttaaaaaggagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaa 506  Q
    |||||||| ||||||||||||||||||| | ||||||| ||||||| | ||  ||| |||||||||||| |||||||||||||||||||||| ||||||     
T  42044476 tttaaaaaagagtaatgatacatagacacccttaggtggcaatacatccttgtacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaag 42044377  T
Q  507 catattttctcttttttcttcctcttctctgttcct 542  Q
    || | |||||||||| || ||||||||||| |||||    
T  42044376 cacactttctcttttctc-tcctcttctctcttcct 42044342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 6034044 - 6034169
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||| | ||||||| ||||||||| ||||||| |||||||||||| ||||| ||||||||||||| || |||||| || | ||||    
T  6034044 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttc 6034143  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || ||||||||||| |||||    
T  6034144 tcttttctc-tcctcttctctcttcct 6034169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 416 - 536
Target Start/End: Complemental strand, 24995207 - 24995088
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||| || |||| | |||| || ||||||||| ||||||| ||||| ||||||||||||||||||||||||||||| |||||| || ||||||    
T  24995207 gagtaatgatatatggacacccttagatggcaatacaccctttgacacccacataaaaatttgacacgtagtcacgtggaccccgcacaagcacattttc 24995108  T
Q  516 tcttttttcttcctcttctct 536  Q
    |||||| || |||||||||||    
T  24995107 tcttttctc-tcctcttctct 24995088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 416 - 495
Target Start/End: Complemental strand, 50526271 - 50526192
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtgga 495  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||| |||||||| ||||||||||    
T  50526271 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacgtgga 50526192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 23608235 - 23608360
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||| ||||||| | |||| |||||||||||||||||||| |||||||||||| ||||||||||||||||| || |  ||||| || | ||||    
T  23608235 gagtaatgatatatagacacccttagatgacaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtgaactccacacaagcacactttc 23608334  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || ||||||||||| |||||    
T  23608335 tcttttatc-tcctcttctctcttcct 23608360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 416 - 520
Target Start/End: Original strand, 3481654 - 3481758
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||| ||||||||| ||||||||  ||||||| |||||||||||| |||||| |||||||||||||||  ||||| || | ||||    
T  3481654 gagtaatgatacatagacacctttaggtggcaatacactctttgacacccacacaaaaatctgacacatagtcacgtggaccccacacaagcacactttc 3481753  T
Q  516 tcttt 520  Q
    |||||    
T  3481754 tcttt 3481758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 29234345 - 29234220
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||| | |||| || ||||||||| ||||| | |  ||||||||| |||||||||||||||||||||| |||||| || | ||||    
T  29234345 gagtaatgatacatagacacccttagatggcaatacaccctttgataccttcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 29234246  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || ||||||||||| |||||    
T  29234245 tcttttctc-tcctcttctctcttcct 29234220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 31910192 - 31910317
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||||||||||||||| ||||||||||||||||  ||||||| |||||||||||| |||||| ||| ||| ||||||| |||||| || | ||||    
T  31910192 gagttatgatacatagacatccttaggtgacaatacactctttgacacccacacaaaaatctgacacatagccacatggaccccgcacaagcacactttc 31910291  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || || |||||||| |||||    
T  31910292 tcttttctc-tcatcttctctcttcct 31910317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 55475191 - 55475316
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||||||||| ||||| ||||||| ||||||||| ||||||| |||||||||||| ||||| || | ||  ||||||||||| ||  | | ||||    
T  55475191 gagttatgatacataaacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtggccatatggaccctgcataagtacactttc 55475290  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    ||||| ||||| ||||||||| |||||    
T  55475291 tctttcttctt-ctcttctctcttcct 55475316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 421 - 542
Target Start/End: Complemental strand, 53352660 - 53352541
Alignment:
Q  421 atgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttctcttt 520  Q
    |||||||||||||| | ||||||| |||||||   ||| ||| | |||||||||| ||||||||||| | |||||||| |||||| |||| |||||||||    
T  53352660 atgatacatagacacccttaggtg-caatacattctttaacacctacacaaaaatctgacacgtagttaagtggaccccgcacaagcatactttctcttt 53352562  T
Q  521 tttcttcctcttctctgttcct 542  Q
    | || ||||||||||| |||||    
T  53352561 tctc-tcctcttctctcttcct 53352541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 416 - 483
Target Start/End: Original strand, 40574779 - 40574846
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacg 483  Q
    |||| |||||||||||||||| |||||||  |||||||| ||||||| |||||||||||| |||||||    
T  40574779 gagttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacg 40574846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 47104544 - 47104612
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgt 484  Q
    ||||||||||| ||||||||  |||| |||||||||||  | ||||| |||||||||||||||||||||    
T  47104544 gagtaatgatatatagacattcttagatgacaatacactctctgacacccacacaaaaatttgacacgt 47104612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 542
Target Start/End: Complemental strand, 28480360 - 28480243
Alignment:
Q  424 atacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttctctttttt 523  Q
    ||||||||||| | ||||||||||||||||   || |||  ||||||||||| ||||| ||||||| ||||||||  |||||||| | |||||| ||  |    
T  28480360 atacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttctccttcat 28480261  T
Q  524 cttcctcttctctgttcct 542  Q
    | ||||||||||| |||||    
T  28480260 c-tcctcttctctcttcct 28480243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 542
Target Start/End: Complemental strand, 28481235 - 28481118
Alignment:
Q  424 atacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttctctttttt 523  Q
    ||||||||||| | ||||||||||||||||   || |||  ||||||||||| ||||| ||||||| ||||||||  |||||||| | |||||| ||  |    
T  28481235 atacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttctccttcat 28481136  T
Q  524 cttcctcttctctgttcct 542  Q
    | ||||||||||| |||||    
T  28481135 c-tcctcttctctcttcct 28481118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 542
Target Start/End: Complemental strand, 28482110 - 28481993
Alignment:
Q  424 atacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttctctttttt 523  Q
    ||||||||||| | ||||||||||||||||   || |||  ||||||||||| ||||| ||||||| ||||||||  |||||||| | |||||| ||  |    
T  28482110 atacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttctccttcat 28482011  T
Q  524 cttcctcttctctgttcct 542  Q
    | ||||||||||| |||||    
T  28482010 c-tcctcttctctcttcct 28481993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 464 - 542
Target Start/End: Original strand, 41823930 - 41824007
Alignment:
Q  464 ccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttctcttttttcttcctcttctctgttcct 542  Q
    |||||||||||| |||||||||||||| ||||||| |||||| || | |||||||||| || || |||||||| |||||    
T  41823930 ccacacaaaaatctgacacgtagtcacatggaccccgcacaagcacactttctcttttctc-tcttcttctctcttcct 41824007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 48647826 - 48647701
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||| ||||| ||||| |||||| ||||||||||  || ||| ||||| |||||| | |||||| ||||||||||| | |||||| || | ||||    
T  48647826 gagttatgacacataaacatccttaggtaacaatacacctcttaacacccacataaaaatctaacacgtggtcacgtggactccgcacaagcacaatttc 48647727  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||  || ||||||||||| |||||    
T  48647726 tctttcctc-tcctcttctctcttcct 48647701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 520
Target Start/End: Original strand, 29977885 - 29977989
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||| | | |  |||||| |||||||||  || ||| |||||||||||| |||||||||||||  |||||||  ||||| || | ||||    
T  29977885 gagtaatgatacatacagaaccataggtggcaatacaccccttaacacccacacaaaaatctgacacgtagtcatatggaccccacacaagcacactttc 29977984  T
Q  516 tcttt 520  Q
    |||||    
T  29977985 tcttt 29977989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 448 - 520
Target Start/End: Complemental strand, 56300233 - 56300161
Alignment:
Q  448 atacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttctcttt 520  Q
    ||||| |||||||||||||||||||||| ||||| || ||||  || | |||||||||||| | |||||||||    
T  56300233 atacatcatttgacatccacacaaaaatctgacatgtggtcatatgaatcctgcacaaacacactttctcttt 56300161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 19670816 - 19670691
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||||||||| ||| | ||||||| |||||||||  ||||||  ||||||||||| ||||| || | ||  ||||||| ||||||  | | ||||    
T  19670816 gagttatgatacataaacacccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 19670717  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    ||||| ||||| ||||||||| |||||    
T  19670716 tctttcttctt-ctcttctctcttcct 19670691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 47986208 - 47986333
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||||||||| ||| | ||||||| ||||||| |  ||||||||||||||||||| ||||| || | ||  ||||||| ||||||  | | ||||    
T  47986208 gagttatgatacataaacacccttaggtggcaatacatcccttgacatccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 47986307  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    ||||| || || ||||||||| |||||    
T  47986308 tctttcttatt-ctcttctctcttcct 47986333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 481
Target Start/End: Complemental strand, 29548059 - 29547994
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgaca 481  Q
    |||| |||||||||| ||||| ||||||| ||||||| |  |||||| |||||||||||| |||||    
T  29548059 gagttatgatacataaacatccttaggtggcaatacatcccttgacacccacacaaaaatctgaca 29547994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 481
Target Start/End: Complemental strand, 44536845 - 44536781
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgaca 481  Q
    |||| |||||||||| |||  |||||||| ||||||||| || ||||||||||||||||| |||||    
T  44536845 gagttatgatacataaacacttttaggtggcaatacaccctt-gacatccacacaaaaatctgaca 44536781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 438 - 542
Target Start/End: Complemental strand, 17983821 - 17983718
Alignment:
Q  438 ttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttctcttttttcttcctcttctctg 537  Q
    ||||||| |||||||||  |||||| |||||||||||| ||||| || | ||  ||||||| ||||||  | | ||||||||| ||||| |||||||||     
T  17983821 ttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttctt-ctcttctctc 17983723  T
Q  538 ttcct 542  Q
    |||||    
T  17983722 ttcct 17983718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 2e-32; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 419 - 542
Target Start/End: Complemental strand, 19930917 - 19930795
Alignment:
Q  419 taatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttctct 518  Q
    |||||||||||||||| | ||||||| ||||||||| |||||||||||||||||||| ||||||||||||| |||||||| ||||||||| | |||||||    
T  19930917 taatgatacatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaaacacactttctct 19930818  T
Q  519 tttttcttcctcttctctgttcct 542  Q
    ||| || ||||||||||| |||||    
T  19930817 tttctc-tcctcttctctcttcct 19930795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 10249482 - 10249357
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||| | ||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||||| |||||| || | ||||    
T  10249482 gagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 10249383  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || ||||||| ||| |||||    
T  10249382 tcttttctc-tcctcttttctcttcct 10249357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 13438343 - 13438468
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||| | ||||||||||||||| | ||||||| |||||||||||| |||||||||||||||||||||| |||||| || | ||||    
T  13438343 gagtaatgatacatagacacccttaggtgacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 13438442  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || ||||||||||| |||||    
T  13438443 tcttttctc-tcctcttctctcttcct 13438468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 416 - 536
Target Start/End: Complemental strand, 32505748 - 32505629
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||| | ||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||||| |||||| || | ||||    
T  32505748 gagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 32505649  T
Q  516 tcttttttcttcctcttctct 536  Q
    | |||| || |||||||||||    
T  32505648 tattttctc-tcctcttctct 32505629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 419 - 542
Target Start/End: Original strand, 28863458 - 28863580
Alignment:
Q  419 taatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttctct 518  Q
    |||||||||||||||| | ||||||| ||||||||| ||||||| |||||||||||| |||||||||||||||||||||| |||||| || | |||||||    
T  28863458 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 28863557  T
Q  519 tttttcttcctcttctctgttcct 542  Q
    ||| || ||||||||||| |||||    
T  28863558 tttatc-tcctcttctctcttcct 28863580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 9058480 - 9058605
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||| | ||||||| ||||||||| ||||||| |||||||||||| ||||||||||||| |||||||| |||||| || | ||||    
T  9058480 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttc 9058579  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || ||||||||||| |||||    
T  9058580 tcttttctc-tcctcttctctcttcct 9058605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 414 - 542
Target Start/End: Original strand, 17473018 - 17473145
Alignment:
Q  414 aggagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattt 513  Q
    ||||||||||||||||||||| | |||| || ||||||||| ||||||| |||||||||||| ||||||||||||||||||| || |||||| || | ||    
T  17473018 aggagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 17473117  T
Q  514 tctcttttttcttcctcttctctgttcct 542  Q
    |||||||| || ||||||||||| |||||    
T  17473118 tctcttttctc-tcctcttctctcttcct 17473145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 40701478 - 40701603
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||| | ||||||| ||||||||| ||||||| |||||||||||| ||||||||||| |||||||||| |||||| || | ||||    
T  40701478 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactttc 40701577  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || || |||||||| |||||    
T  40701578 tcttttctc-tcatcttctctcttcct 40701603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 416 - 520
Target Start/End: Complemental strand, 33436200 - 33436096
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||| | ||||||| ||||||||| ||||||| |||||||||||| | |||||||||||||||||||| |||||| || | ||||    
T  33436200 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttc 33436101  T
Q  516 tcttt 520  Q
    |||||    
T  33436100 tcttt 33436096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 416 - 495
Target Start/End: Original strand, 4060685 - 4060764
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtgga 495  Q
    ||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||    
T  4060685 gagtaatgatacatagacacccttaggtgacaatacaccttttgacatccacacaaaaatctgacacgtagttacgtgga 4060764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 7465835 - 7465710
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||| | |||| || ||||||||| ||||||| |||||||||||| ||||||||||||||||||||||  ||||| || | ||||    
T  7465835 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttc 7465736  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || || |||||||| |||||    
T  7465735 tcttttatc-tcttcttctctcttcct 7465710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 416 - 529
Target Start/End: Complemental strand, 5574588 - 5574475
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||||||||||||||||||   ||||||| ||||||||| ||||||| ||||| |||||| ||||||||||||||||||| || |||||| || | ||||    
T  5574588 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 5574489  T
Q  516 tcttttttcttcct 529  Q
    |||||| |||||||    
T  5574488 tcttttctcttcct 5574475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 416 - 520
Target Start/End: Original strand, 27864704 - 27864808
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||| | ||| ||| ||||||||| |||||||||||||||||||| ||||||||| |||||||||||| ||| || || | ||||    
T  27864704 gagtaatgatacatagacacccttatgtggcaatacaccctttgacatccacacaaaaatctgacacgtaatcacgtggaccccgcaaaagcacactttc 27864803  T
Q  516 tcttt 520  Q
    |||||    
T  27864804 tcttt 27864808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 20700815 - 20700940
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||||| ||| ||| ||||||||| ||||||  | |||||||||| |||||||||||||||||||||| ||| || || | ||||    
T  20700815 gagtaatgatacatagacatccttatgtggcaatacaccctttgactcctacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactttc 20700914  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||  || ||||||||||| |||||    
T  20700915 tctttcctc-tcctcttctctcttcct 20700940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 28381755 - 28381630
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||| | ||||||| ||||||||| || |||| |||||||||||| |||||||||||||| ||||| | |||||| || | ||||    
T  28381755 gagtaatgatacatagacacccttaggtggcaatacacctttcgacacccacacaaaaatctgacacgtagtcacatggactccgcacaagcacactttc 28381656  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || || |||||||| |||||    
T  28381655 tcttttctc-tcatcttctctcttcct 28381630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 30915463 - 30915588
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||| | ||||||| ||||||||| ||||||  ||||| |||||| |||||||||||||||||||||| | |||| || | ||||    
T  30915463 gagtaatgatacatagacacccttaggtggcaatacaccctttgacccccacataaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 30915562  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || || |||||||| |||||    
T  30915563 tcttttctc-tcatcttctctcttcct 30915588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 416 - 498
Target Start/End: Complemental strand, 38882913 - 38882832
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccc 498  Q
    ||||||||||||||||||| | ||||||| ||||| ||| |||||||||||||||||||| ||||||||||||||||||||||    
T  38882913 gagtaatgatacatagacacccttaggtggcaata-accctttgacatccacacaaaaatctgacacgtagtcacgtggaccc 38882832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 416 - 534
Target Start/End: Original strand, 42257193 - 42257310
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||||||||||||||||||||||| ||||||| ||||||||| ||||| |||||| |||||||| | ||| ||||||| |||||| || | ||||    
T  42257193 gagttatgatacatagacatctttaggtggcaatacatcatttgacacccacataaaaatctgacacgtggccacatggaccccgcacaagcacactttc 42257292  T
Q  516 tcttttttcttcctcttct 534  Q
    |||||| || |||||||||    
T  42257293 tcttttctc-tcctcttct 42257310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 416 - 521
Target Start/End: Complemental strand, 40614002 - 40613897
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||||||||||||||| ||||||| ||||||||| ||||||| |||||||||||| |||||||| | ||| ||||||| |||||| || | ||||    
T  40614002 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcacactttc 40613903  T
Q  516 tctttt 521  Q
    ||||||    
T  40613902 tctttt 40613897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 17820104 - 17819979
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||||||||||||| || |||||| |||||||||  |||||| |||||||||||| ||||| || || ||||||||||  |||||||| ||||||    
T  17820104 gagttatgatacatagacaactataggtggcaatacaccccttgacacccacacaaaaatctgacatgtggttacgtggaccccacacaaacacattttc 17820005  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||  || ||||||||||| |||||    
T  17820004 tctttcatc-tcctcttctctcttcct 17819979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 36168836 - 36168961
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||||||||||||||| |||| |||||||||| | ||| ||  ||||||||||||||||||||| | ||| ||||||| |||||| |||| ||||    
T  36168836 gagttatgatacatagacatccttagatgacaatacatcctttaactcccacacaaaaatttgacacgtggccacatggaccccgcacaagcatactttc 36168935  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || |||| |||||| |||||    
T  36168936 tcttttctc-tcctattctctcttcct 36168961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 417 - 498
Target Start/End: Original strand, 41575138 - 41575219
Alignment:
Q  417 agtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccc 498  Q
    |||||||||||||||||||| |||| ||  |||||||| |||||||| ||||||||||||||||| || |||| ||||||||    
T  41575138 agtaatgatacatagacatccttagatggtaatacaccctttgacattcacacaaaaatttgacatgtggtcatgtggaccc 41575219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 38273242 - 38273117
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||||||||||||||  |||| || ||||||||| ||| ||| |||||||||||| |||||||||| ||| ||||||| |||| | || | ||||    
T  38273242 gagttatgatacatagacattcttagatggcaatacaccctttaacacccacacaaaaatctgacacgtagccacatggaccccgcactagcacactttc 38273143  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || |||| |||||| |||||    
T  38273142 tcttttctc-tcctattctctcttcct 38273117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 416 - 541
Target Start/End: Original strand, 2533124 - 2533247
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||||||||||||||| ||| ||| ||||||| | ||||||| |||||||||||| |||||||||| ||| | ||||| |||||| || | |||     
T  2533124 gagttatgatacatagacatccttaagtggcaatacatcctttgaca-ccacacaaaaatctgacacgtagccacatagaccccgcacaagcacactttt 2533222  T
Q  516 tcttttttcttcctcttctctgttcc 541  Q
    |||||| || ||||||||||| ||||    
T  2533223 tcttttatc-tcctcttctctcttcc 2533247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 33436211 - 33436279
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgt 484  Q
    ||||||||||||||||||||| |||| || ||||||||| ||||||| ||||| |||||| ||||||||    
T  33436211 gagtaatgatacatagacatccttagatggcaatacaccttttgacacccacataaaaatctgacacgt 33436279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 26891604 - 26891479
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| ||||||||||| || | ||||||| |||||||||  | |||| |||||||||||| ||||| || ||||||||||||  | |||| || ||||||    
T  26891604 gagttatgatacatagccacccttaggtggcaatacacccctagacacccacacaaaaatctgacatgtggtcacgtggacctcgaacaagcacattttc 26891505  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||  |||| ||||||||| |||||    
T  26891504 tctttcctctt-ctcttctctcttcct 26891479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 414 - 542
Target Start/End: Original strand, 38732352 - 38732479
Alignment:
Q  414 aggagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattt 513  Q
    |||||| |||||||||| ||| | ||| ||||||||||| |  |||||| |||||||||||| ||||| || ||||  ||||||| ||||||  | | ||    
T  38732352 aggagttatgatacataaacacccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactt 38732451  T
Q  514 tctcttttttcttcctcttctctgttcct 542  Q
    ||||||| ||||| ||||||||| |||||    
T  38732452 tctctttcttctt-ctcttctctcttcct 38732479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 43490121 - 43490246
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||||||||| ||| | |||||||||||||||||  |||||| |||||||||||| ||||| || | ||  ||||||| ||||||  | | |||     
T  43490121 gagttatgatacataaacacccttaggtgacaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttta 43490220  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    ||||| ||||| ||||||||| |||||    
T  43490221 tctttcttctt-ctcttctctcttcct 43490246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 438 - 542
Target Start/End: Complemental strand, 2997565 - 2997462
Alignment:
Q  438 ttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttctcttttttcttcctcttctctg 537  Q
    ||||||| |||||||||  |||||| |||||||||||| ||||| || | ||  ||||||| ||||||  | | ||||||||| ||||| |||||||||     
T  2997565 ttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttctt-ctcttctctc 2997467  T
Q  538 ttcct 542  Q
    |||||    
T  2997466 ttcct 2997462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 7e-32; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 53982011 - 53982136
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||| | ||||||| ||||||||| ||||||| |||||||||||| |||||||||||||||||||||| |||||| || | ||||    
T  53982011 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 53982110  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || ||||||||||| |||||    
T  53982111 tcttttctc-tcctcttctctcttcct 53982136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 33644200 - 33644325
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||| | || |||| ||||||||| ||||||| |||||||||||| |||||||||||||||||||||| |||||| || | ||||    
T  33644200 gagtaatgatacatagacacccttgggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 33644299  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || ||||||||||| |||||    
T  33644300 tcttttctc-tcctcttctctcttcct 33644325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 11348022 - 11347897
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||||||||||||||| ||||||||||||||| | |||||||||||||||||||| |||||||| | ||| ||||||||||| || || | ||||    
T  11348022 gagttatgatacatagacatccttaggtgacaatacatcctttgacatccacacaaaaatctgacacgtggccacatggaccctgcataagcacactttc 11347923  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || ||||||||||| |||||    
T  11347922 tcttttctc-tcctcttctctcttcct 11347897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 17470405 - 17470530
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||| ||||||||| ||||||||| ||| ||| |||||||||||| ||||||||||||||||||||||  ||||| || | ||||    
T  17470405 gagtaatgatacatagacacctttaggtggcaatacaccttttaacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttc 17470504  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || || |||||||| |||||    
T  17470505 tcttttctc-tcatcttctctcttcct 17470530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 54868995 - 54868870
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||| | ||||||| ||||||||| ||||||| |||||||||||| ||||||||||| |||||||||| |||||| || | ||||    
T  54868995 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactttc 54868896  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || || |||||||| |||||    
T  54868895 tcttttctc-tcatcttctctcttcct 54868870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 416 - 528
Target Start/End: Complemental strand, 27714991 - 27714879
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||| |||||||||  |||||||| ||||||| |||||||||||| ||||||||||||| |||||||| |||||| || | ||||    
T  27714991 gagtaatgatacatagacacctttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttc 27714892  T
Q  516 tcttttttcttcc 528  Q
    |||| | ||||||    
T  27714891 tcttctctcttcc 27714879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 416 - 520
Target Start/End: Complemental strand, 33118951 - 33118847
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||||||||||||| | ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||  || ||||| | ||||    
T  33118951 gagttatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatccctcagaaacacactttc 33118852  T
Q  516 tcttt 520  Q
    |||||    
T  33118851 tcttt 33118847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 9562999 - 9563124
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||| ||| | |||| |||||||||| | ||||||||||| | |||||| ||||||||||||||||||| |||||||||||| | ||||    
T  9562999 gagtaatgatacataaacaccattagatgacaatacaacctttgacatccatataaaaatctgacacgtagtcacgtggatcctgcacaaacacactttc 9563098  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    ||| || || ||||||||||| |||||    
T  9563099 tctcttctc-tcctcttctctcttcct 9563124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 416 - 529
Target Start/End: Complemental strand, 11095453 - 11095342
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||| | ||||||| ||||||||| ||||||| |||||||||||| ||||||||||||||||  |||| ||| ||||| | ||||    
T  11095453 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgt--accccgcataaacacactttc 11095356  T
Q  516 tcttttttcttcct 529  Q
    |||||| |||||||    
T  11095355 tcttttctcttcct 11095342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 49607414 - 49607539
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||| | ||||||| ||||||||| ||||||| |||||||||||| ||||||||||||||||||| ||  ||||| || | ||||    
T  49607414 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacactttc 49607513  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || ||||||| ||| |||||    
T  49607514 tcttttctc-tcctcttttctcttcct 49607539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 421 - 542
Target Start/End: Original strand, 52629305 - 52629425
Alignment:
Q  421 atgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttctcttt 520  Q
    |||||||||||||| | ||||||| ||||||||| ||||||| |||||||||||| |||||||||||||||||||||| | |||| || | |||||||||    
T  52629305 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctcttt 52629404  T
Q  521 tttcttcctcttctctgttcct 542  Q
    | || || |||||||| |||||    
T  52629405 tctc-tcatcttctctcttcct 52629425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 416 - 495
Target Start/End: Complemental strand, 36707524 - 36707445
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtgga 495  Q
    ||||||||||||||||| | | ||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||    
T  36707524 gagtaatgatacatagatacccttaggtgacaatacaccctttgacatccacacaaaaatctgacacgtagttacgtgga 36707445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 8076393 - 8076518
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||| ||| | ||||||| || |||||| ||||||| |||||||||||| | |||||||||||||||||||| |||||| || | ||||    
T  8076393 gagtaatgatacataaacacccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttc 8076492  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||  || ||||||||||| |||||    
T  8076493 tctttcctc-tcctcttctctcttcct 8076518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 24700054 - 24699929
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||||| |||| || ||||||||| ||||||| ||||| |||||| || ||||| | ||||||||||||| ||||||| | ||||    
T  24700054 gagtaatgatacatagacatccttagttggcaatacaccttttgacacccacataaaaatctggcacgtggccacgtggaccctgtacaaacacactttc 24699955  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||  || ||||||||||| |||||    
T  24699954 tctttcctc-tcctcttctctcttcct 24699929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 417 - 542
Target Start/End: Original strand, 31456690 - 31456814
Alignment:
Q  417 agtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttct 516  Q
    |||||||||||||||||| |  |||| | ||||||||| ||||||| |||||||||||| ||||||||||||| |||||||| |||||| || | |||||    
T  31456690 agtaatgatacatagacacccataggcggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttct 31456789  T
Q  517 cttttttcttcctcttctctgttcct 542  Q
    ||||| || ||||||| ||| |||||    
T  31456790 cttttctc-tcctcttttctcttcct 31456814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 416 - 534
Target Start/End: Complemental strand, 26141632 - 26141515
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||||||||||||||| ||||||| ||||||||| ||| ||| |||||||||||| |||||||| ||||| |||||||  ||||| || | ||||    
T  26141632 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccacacaagcacactttc 26141533  T
Q  516 tcttttttcttcctcttct 534  Q
    |||||| || |||||||||    
T  26141532 tcttttctc-tcctcttct 26141515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 35536626 - 35536751
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||||| ||| ||| ||||||||||||||||| ||||| |||||| |||||||| |||| ||||||| | ||||| || | || |    
T  35536626 gagtaatgatacatagacatccttatgtggcaatacaccatttgacacccacataaaaatgtgacacgtggtcatgtggaccttacacaagcacacttcc 35536725  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||  |||| ||||||||| |||||    
T  35536726 tctttcatctt-ctcttctctcttcct 35536751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 416 - 534
Target Start/End: Complemental strand, 41189864 - 41189747
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||||||||| ||||| ||||||| ||||||| ||||||||| ||||| ||||||||||||||| | ||| ||||||| |||||| || | ||||    
T  41189864 gagttatgatacatatacatccttaggtggcaatacatcatttgacacccacataaaaatttgacacgtggccacatggaccccgcacaagcacactttc 41189765  T
Q  516 tcttttttcttcctcttct 534  Q
    |||||| || |||||||||    
T  41189764 tcttttctc-tcctcttct 41189747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 421 - 542
Target Start/End: Original strand, 26754700 - 26754820
Alignment:
Q  421 atgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttctcttt 520  Q
    ||||| |||||||| | ||||||| ||||||||| || ||||||||||||||||| ||||| || ||||| ||||||| |||||| || |||||||||||    
T  26754700 atgattcatagacacccttaggtggcaatacacccttggacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctcttt 26754799  T
Q  521 tttcttcctcttctctgttcct 542  Q
      || ||||||||||| |||||    
T  26754800 cctc-tcctcttctctcttcct 26754820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 420 - 520
Target Start/End: Complemental strand, 30801829 - 30801729
Alignment:
Q  420 aatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttctctt 519  Q
    ||||||||||||||| | |||||||| |||||||| ||||| | |||||||||||| ||||| |||||||  |||||||  ||||| || ||||||||||    
T  30801829 aatgatacatagacacccttaggtgataatacaccctttgatacccacacaaaaatatgacatgtagtcatatggaccccacacaagcacattttctctt 30801730  T
Q  520 t 520  Q
    |    
T  30801729 t 30801729  T

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Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 423 - 481
Target Start/End: Original strand, 35093592 - 35093650
Alignment:
Q  423 gatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgaca 481  Q
    |||||||||||| ||||||||||||||||| |||||||||||||| ||||||| |||||    
T  35093592 gatacatagacaactttaggtgacaatacaacatttgacatccacgcaaaaatctgaca 35093650  T

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Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 51419460 - 51419335
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||||||||||||||| |||| |||||||||| | ||| ||| |||||||||||| |||||||| | ||| | ||||| |||||| || | ||||    
T  51419460 gagttatgatacatagacatccttagatgacaatacatcctttaacacccacacaaaaatctgacacgtggccacatagaccccgcacaagcacactttc 51419361  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || |||| |||||| |||||    
T  51419360 tcttttctc-tcctattctctcttcct 51419335  T

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Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 420 - 505
Target Start/End: Complemental strand, 48587187 - 48587102
Alignment:
Q  420 aatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaa 505  Q
    ||||||||||||| | | ||||||| ||||||||| ||||||| | ||| |||||| ||||||||||||||||||| || ||||||    
T  48587187 aatgatacatagatacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggatcccgcacaa 48587102  T

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Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 414 - 481
Target Start/End: Complemental strand, 14623941 - 14623874
Alignment:
Q  414 aggagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgaca 481  Q
    ||||||||||||||||||||||| ||||||| |||||||||  |||||| ||||| |||||| |||||    
T  14623941 aggagtaatgatacatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgaca 14623874  T

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Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 8956762 - 8956887
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||||| ||| ||| ||||||| | ||||||| ||||| |||||| ||||||||  ||| ||||||| | ||||| || | || |    
T  8956762 gagtaatgatacatagacatccttatgtggcaatacatcctttgacacccacataaaaatgtgacacgtgttcatgtggaccttacacaagcacacttcc 8956861  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||  |||| ||||||||| |||||    
T  8956862 tctttcatctt-ctcttctctcttcct 8956887  T

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Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 47531865 - 47531990
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||||||||||||||| |||| || ||||||||| ||| |||||||||||| ||| |||||||| | ||  || |||| |||||| || | ||||    
T  47531865 gagttatgatacatagacatccttagatggcaatacaccttttaacatccacacaagaatctgacacgtggccatatgaaccccgcacaagcacactttc 47531964  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || |||| |||||| |||||    
T  47531965 tcttttctc-tcctattctctcttcct 47531990  T

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Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 20765015 - 20764890
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||| ||||||||||| |||||||  |||||||  ||| ||| |||||||||||| |||||||| | ||| ||||||| | |||| || | ||||    
T  20765015 gagttatgagacatagacatccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtggccacatggaccccgtacaagcacactttc 20764916  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||| || || |||||||| |||||    
T  20764915 tcttttctc-tcatcttctctcttcct 20764890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 48375806 - 48375681
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| ||||| |||||||| | |||||||||||||||||  |  | ||||| |||||||| ||||  || ||||| ||||||| |||||| || ||||||    
T  48375806 gagttatgattcatagacacccttaggtgacaatacacccctgaaaatccatacaaaaatctgacgtgtggtcacatggaccccgcacaagcacattttc 48375707  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||  || ||||||||||| |||||    
T  48375706 tctttcctc-tcctcttctctcttcct 48375681  T

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Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 35965874 - 35965806
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgt 484  Q
    ||||||||||||||| ||||| ||| |||| |||||| | ||||||| ||||| |||||| ||||||||    
T  35965874 gagtaatgatacatatacatccttaagtgataatacatcctttgacacccacataaaaatctgacacgt 35965806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 542
Target Start/End: Original strand, 41080700 - 41080832
Alignment:
Q  407 tttaaaaaggagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaa 506  Q
    ||||| || ||||||||||||||||||||| ||| ||  ||| ||||| ||||||| |||| ||||||| ||| | || |||| ||||||||  |||||     
T  41080700 tttaacaacgagtaatgatacatagacatcctta-gtagcaaaacaccctttgacacccacgcaaaaatctgatatgtggtcatgtggaccc-acacaag 41080797  T
Q  507 catattttctcttttttcttcctcttctctgttcct 542  Q
    || |||||||||||  || ||||||||||| |||||    
T  41080798 cacattttctctttcatc-tcctcttctctcttcct 41080832  T

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Target: scaffold1268 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 1029 - 904
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||  ||||||||||||||||| | || |||||| || | ||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttc 930  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||  || ||||||||||| |||||    
T  929 tctttcctc-tcctcttctctcttcct 904  T

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Target: scaffold1267 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 416 - 542
Target Start/End: Complemental strand, 1029 - 904
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    ||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||  ||||||||||||||||| | || |||||| || | ||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttc 930  T
Q  516 tcttttttcttcctcttctctgttcct 542  Q
    |||||  || ||||||||||| |||||    
T  929 tctttcctc-tcctcttctctcttcct 904  T

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Target: scaffold0321 (Bit Score: 61; Significance: 6e-26; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 406 - 542
Target Start/End: Complemental strand, 10218 - 10084
Alignment:
Q  406 ttttaaaaaggagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaa 505  Q
    |||||||||| ||| |||||||||||||| ||||||||| ||||||| | ||||||||||||| |||||| |||||||||||||||||||||  | ||||    
T  10218 ttttaaaaag-agttatgatacatagacacctttaggtggcaatacatcctttgacatccacataaaaatctgacacgtagtcacgtggaccgcgtacaa 10120  T
Q  506 acatattttctcttttttcttcctcttctctgttcct 542  Q
     || | |||||||||| || ||||||||||| |||||    
T  10119 gcacactttctcttttctc-tcctcttctctcttcct 10084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 416 - 520
Target Start/End: Complemental strand, 8963 - 8859
Alignment:
Q  416 gagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttc 515  Q
    |||| |||||| ||||||||| ||| |||||||||||| |||||||||| ||||||||||||||||| |||||||||||||||  |||||  | ||||||    
T  8963 gagttatgatatatagacatccttaagtgacaatacactatttgacatctacacaaaaatttgacacatagtcacgtggaccccacacaagtacattttc 8864  T
Q  516 tcttt 520  Q
    |||||    
T  8863 tcttt 8859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 415 - 542
Target Start/End: Original strand, 4028 - 4154
Alignment:
Q  415 ggagtaatgatacatagacatctttaggtgacaatacaccatttgacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatatttt 514  Q
    |||||||||||||||||||| |||||| || ||||||||| ||| ||| |||||||||||| ||||||||||| ||||||| || ||| || || | |||    
T  4028 ggagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacacttt 4127  T
Q  515 ctcttttttcttcctcttctctgttcct 542  Q
    ||||||| |||| ||||||||| |||||    
T  4128 ctcttttctctt-ctcttctctcttcct 4154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 459 - 520
Target Start/End: Original strand, 17097 - 17158
Alignment:
Q  459 gacatccacacaaaaatttgacacgtagtcacgtggaccctgcacaaacatattttctcttt 520  Q
    ||||||||||||||||| ||||| || ||||| ||||||| |||||| || |||||||||||    
T  17097 gacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctcttt 17158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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