View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14723_high_17 (Length: 351)

Name: NF14723_high_17
Description: NF14723
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14723_high_17
NF14723_high_17
[»] chr7 (51 HSPs)
chr7 (8-328)||(47281410-47281730)
chr7 (38-200)||(47274810-47274970)
chr7 (288-334)||(11476834-11476880)
chr7 (288-330)||(30876452-30876494)
chr7 (280-328)||(4923022-4923070)
chr7 (286-330)||(43968541-43968585)
chr7 (286-329)||(39033876-39033919)
chr7 (283-329)||(45723774-45723820)
chr7 (293-330)||(5106071-5106108)
chr7 (289-330)||(40851130-40851171)
chr7 (290-334)||(44551048-44551093)
chr7 (285-330)||(48628998-48629043)
chr7 (291-335)||(38427838-38427882)
chr7 (288-328)||(47119837-47119877)
chr7 (288-328)||(47219340-47219380)
chr7 (287-330)||(11476461-11476504)
chr7 (291-330)||(29739521-29739560)
chr7 (287-330)||(47218961-47219004)
chr7 (289-328)||(47281030-47281069)
chr7 (288-330)||(1469775-1469817)
chr7 (288-330)||(27772982-27773024)
chr7 (288-326)||(31684040-31684078)
chr7 (288-330)||(47294197-47294239)
chr7 (288-329)||(2960546-2960587)
chr7 (290-335)||(11050538-11050583)
chr7 (289-334)||(30798276-30798321)
chr7 (287-328)||(35600027-35600068)
chr7 (291-328)||(41139697-41139734)
chr7 (289-330)||(42888722-42888763)
chr7 (287-328)||(43753059-43753100)
chr7 (288-328)||(3797448-3797488)
chr7 (289-329)||(23842152-23842192)
chr7 (284-328)||(35600406-35600450)
chr7 (288-328)||(45723397-45723437)
chr7 (289-328)||(25801473-25801512)
chr7 (287-330)||(37354188-37354231)
chr7 (287-330)||(37394279-37394322)
chr7 (289-328)||(42979245-42979284)
chr7 (289-328)||(47294546-47294585)
chr7 (288-334)||(4923365-4923411)
chr7 (284-334)||(18353334-18353384)
chr7 (288-330)||(27364621-27364663)
chr7 (286-320)||(31684397-31684431)
chr7 (288-330)||(47271799-47271841)
chr7 (288-330)||(47272174-47272216)
chr7 (289-334)||(1469400-1469445)
chr7 (289-334)||(2960863-2960907)
chr7 (291-328)||(7336254-7336291)
chr7 (284-321)||(31793910-31793947)
chr7 (289-328)||(34378514-34378554)
chr7 (287-330)||(37393902-37393946)
[»] chr8 (44 HSPs)
chr8 (282-334)||(24430850-24430902)
chr8 (288-328)||(24193567-24193607)
chr8 (291-334)||(6016374-6016417)
chr8 (287-330)||(43468908-43468951)
chr8 (287-334)||(43806438-43806485)
chr8 (288-330)||(9884673-9884715)
chr8 (288-334)||(33652030-33652076)
chr8 (289-330)||(22684241-22684282)
chr8 (288-328)||(24430477-24430517)
chr8 (289-328)||(3875786-3875825)
chr8 (286-329)||(5720425-5720468)
chr8 (287-330)||(6016050-6016093)
chr8 (291-330)||(7435055-7435094)
chr8 (291-330)||(10162717-10162756)
chr8 (287-330)||(15846954-15846997)
chr8 (289-332)||(35884337-35884380)
chr8 (287-329)||(18873889-18873931)
chr8 (287-328)||(4648966-4649007)
chr8 (287-328)||(33651657-33651698)
chr8 (285-330)||(38107292-38107337)
chr8 (290-334)||(441029-441073)
chr8 (287-327)||(8137327-8137367)
chr8 (286-330)||(35443504-35443548)
chr8 (288-328)||(41536433-41536473)
chr8 (281-328)||(260172-260219)
chr8 (287-330)||(440656-440699)
chr8 (281-328)||(655702-655749)
chr8 (281-328)||(841437-841484)
chr8 (283-334)||(15847301-15847352)
chr8 (290-329)||(23972580-23972619)
chr8 (288-330)||(36399975-36400018)
chr8 (289-328)||(36739606-36739645)
chr8 (288-330)||(13797281-13797323)
chr8 (288-330)||(22683894-22683936)
chr8 (290-328)||(40302176-40302214)
chr8 (287-328)||(513502-513543)
chr8 (288-329)||(1293304-1293345)
chr8 (289-330)||(12010398-12010438)
chr8 (288-321)||(23972200-23972233)
chr8 (289-330)||(37933835-37933876)
chr8 (285-334)||(38633613-38633662)
chr8 (283-330)||(2533083-2533131)
chr8 (294-330)||(3876101-3876137)
chr8 (289-321)||(9056658-9056690)
[»] chr3 (65 HSPs)
chr3 (287-334)||(52821339-52821386)
chr3 (286-334)||(12748549-12748597)
chr3 (286-329)||(19664356-19664399)
chr3 (287-330)||(21564341-21564384)
chr3 (285-328)||(21656713-21656756)
chr3 (288-330)||(1016890-1016932)
chr3 (288-330)||(8097214-8097256)
chr3 (288-330)||(36315254-36315296)
chr3 (288-329)||(1448641-1448682)
chr3 (289-330)||(1687498-1687539)
chr3 (289-330)||(19229243-19229284)
chr3 (287-328)||(20760355-20760396)
chr3 (288-328)||(38446294-38446334)
chr3 (288-328)||(44152517-44152557)
chr3 (286-330)||(50287381-50287425)
chr3 (290-330)||(53196206-53196246)
chr3 (288-334)||(10618729-10618776)
chr3 (287-330)||(20813723-20813766)
chr3 (287-330)||(31122855-31122898)
chr3 (287-330)||(33151918-33151961)
chr3 (290-329)||(41250736-41250775)
chr3 (281-328)||(47329458-47329505)
chr3 (287-330)||(48651064-48651107)
chr3 (280-330)||(1448985-1449035)
chr3 (287-329)||(1687845-1687887)
chr3 (289-327)||(10618388-10618426)
chr3 (288-330)||(21564689-21564731)
chr3 (288-334)||(35346377-35346423)
chr3 (288-330)||(49799345-49799387)
chr3 (288-334)||(51562351-51562397)
chr3 (289-330)||(29677669-29677710)
chr3 (281-334)||(32650719-32650772)
chr3 (288-329)||(35608384-35608425)
chr3 (293-330)||(45380171-45380208)
chr3 (288-329)||(49799017-49799058)
chr3 (289-330)||(53195832-53195873)
chr3 (288-329)||(55164398-55164439)
chr3 (288-328)||(21890365-21890405)
chr3 (288-328)||(22851813-22851853)
chr3 (288-328)||(32651104-32651144)
chr3 (288-328)||(44152868-44152908)
chr3 (287-330)||(28775383-28775426)
chr3 (289-328)||(34019337-34019376)
chr3 (279-334)||(40922063-40922117)
chr3 (289-328)||(47329082-47329121)
chr3 (287-330)||(47473075-47473118)
chr3 (287-329)||(12748236-12748278)
chr3 (287-329)||(50978038-50978080)
chr3 (287-329)||(51081170-51081212)
chr3 (285-327)||(52820952-52820994)
chr3 (289-330)||(19268720-19268760)
chr3 (289-330)||(21656336-21656377)
chr3 (289-330)||(27071021-27071062)
chr3 (287-328)||(29677351-29677392)
chr3 (289-334)||(50977712-50977756)
chr3 (289-334)||(51080844-51080888)
chr3 (289-330)||(51475501-51475541)
chr3 (287-328)||(53926264-53926305)
chr3 (290-330)||(1017237-1017277)
chr3 (289-329)||(19228887-19228927)
chr3 (288-328)||(20086220-20086260)
chr3 (289-321)||(20914046-20914078)
chr3 (289-321)||(20922164-20922196)
chr3 (289-329)||(28193248-28193288)
chr3 (289-321)||(50365152-50365184)
[»] chr2 (56 HSPs)
chr2 (281-329)||(2094664-2094712)
chr2 (282-330)||(23671712-23671760)
chr2 (287-334)||(8396800-8396847)
chr2 (287-330)||(28650710-28650753)
chr2 (287-330)||(33107251-33107294)
chr2 (285-334)||(37838486-37838535)
chr2 (283-334)||(3430526-3430577)
chr2 (288-330)||(920839-920881)
chr2 (283-329)||(36444511-36444557)
chr2 (290-334)||(19915915-19915959)
chr2 (286-330)||(23673155-23673199)
chr2 (284-328)||(27328779-27328823)
chr2 (288-328)||(36211242-36211282)
chr2 (281-321)||(37654296-37654336)
chr2 (284-328)||(37838093-37838137)
chr2 (284-327)||(2057121-2057164)
chr2 (287-334)||(28650331-28650378)
chr2 (289-328)||(41178303-41178342)
chr2 (284-330)||(771878-771924)
chr2 (285-334)||(27328400-27328450)
chr2 (288-330)||(31214099-31214141)
chr2 (288-330)||(37732099-37732141)
chr2 (288-330)||(41500775-41500817)
chr2 (287-329)||(42629801-42629843)
chr2 (288-330)||(42630155-42630197)
chr2 (289-334)||(9276763-9276808)
chr2 (289-330)||(12759657-12759698)
chr2 (289-326)||(16246479-16246516)
chr2 (288-329)||(17484456-17484497)
chr2 (289-330)||(41500409-41500450)
chr2 (288-328)||(2094317-2094357)
chr2 (289-329)||(2315257-2315297)
chr2 (286-330)||(2456203-2456247)
chr2 (290-334)||(22066670-22066714)
chr2 (290-330)||(33865549-33865589)
chr2 (288-328)||(37732448-37732488)
chr2 (289-328)||(8899876-8899915)
chr2 (286-329)||(22066573-22066616)
chr2 (289-328)||(29737943-29737982)
chr2 (288-330)||(31187424-31187467)
chr2 (288-330)||(31195484-31195527)
chr2 (291-330)||(43249321-43249360)
chr2 (287-321)||(38750863-38750897)
chr2 (285-330)||(772228-772272)
chr2 (285-330)||(9276388-9276433)
chr2 (285-330)||(9331579-9331624)
chr2 (287-328)||(11949331-11949372)
chr2 (287-328)||(12760033-12760074)
chr2 (291-328)||(17484834-17484871)
chr2 (289-330)||(28216872-28216912)
chr2 (281-334)||(36210856-36210909)
chr2 (287-328)||(38751242-38751283)
chr2 (289-330)||(40854802-40854843)
chr2 (291-328)||(45123967-45124004)
chr2 (302-330)||(2056758-2056786)
chr2 (290-330)||(14630806-14630846)
[»] scaffold0184 (1 HSPs)
scaffold0184 (282-329)||(12906-12953)
[»] scaffold0078 (1 HSPs)
scaffold0078 (282-329)||(59891-59938)
[»] chr4 (73 HSPs)
chr4 (287-330)||(12196294-12196337)
chr4 (282-330)||(28264483-28264531)
chr4 (286-334)||(30141355-30141403)
chr4 (287-330)||(17847406-17847449)
chr4 (287-330)||(19169048-19169091)
chr4 (281-328)||(26017262-26017309)
chr4 (287-330)||(28160237-28160280)
chr4 (283-330)||(31208560-31208607)
chr4 (286-328)||(5227585-5227627)
chr4 (284-334)||(28159855-28159905)
chr4 (284-330)||(36444697-36444743)
chr4 (286-328)||(39995451-39995493)
chr4 (282-328)||(48552001-48552047)
chr4 (288-334)||(51371354-51371400)
chr4 (287-328)||(2055101-2055142)
chr4 (287-328)||(19496430-19496471)
chr4 (287-328)||(22298335-22298376)
chr4 (289-334)||(23553253-23553298)
chr4 (289-330)||(25734505-25734546)
chr4 (289-330)||(28812194-28812235)
chr4 (287-328)||(50276419-50276460)
chr4 (288-328)||(8881917-8881957)
chr4 (286-330)||(28264836-28264880)
chr4 (288-328)||(36444588-36444628)
chr4 (290-329)||(14564615-14564654)
chr4 (288-327)||(17847003-17847042)
chr4 (289-332)||(24458538-24458581)
chr4 (290-329)||(49118459-49118498)
chr4 (288-330)||(22298711-22298753)
chr4 (287-329)||(35790787-35790829)
chr4 (286-328)||(48551668-48551710)
chr4 (288-329)||(44490027-44490068)
chr4 (287-328)||(48149694-48149735)
chr4 (290-330)||(17993299-17993339)
chr4 (289-329)||(24622995-24623035)
chr4 (291-327)||(27613280-27613316)
chr4 (287-335)||(31208932-31208979)
chr4 (286-330)||(32118529-32118573)
chr4 (288-328)||(33173926-33173966)
chr4 (288-328)||(33808065-33808105)
chr4 (282-330)||(37381657-37381705)
chr4 (284-328)||(42273997-42274041)
chr4 (289-328)||(9339410-9339449)
chr4 (287-330)||(12196662-12196705)
chr4 (287-330)||(31591268-31591311)
chr4 (289-328)||(33174275-33174314)
chr4 (287-330)||(33496407-33496450)
chr4 (289-328)||(33693618-33693657)
chr4 (291-338)||(36834955-36835002)
chr4 (291-334)||(41355202-41355245)
chr4 (281-328)||(42549876-42549923)
chr4 (288-330)||(56555425-56555468)
chr4 (290-328)||(10588775-10588813)
chr4 (290-328)||(30466910-30466948)
chr4 (284-334)||(33693235-33693285)
chr4 (288-330)||(33807687-33807729)
chr4 (289-330)||(39995073-39995115)
chr4 (284-334)||(40988818-40988868)
chr4 (291-329)||(48707987-48708025)
chr4 (289-330)||(31973784-31973825)
chr4 (292-329)||(33452319-33452356)
chr4 (287-320)||(42273647-42273680)
chr4 (289-330)||(50276045-50276086)
chr4 (291-328)||(50542638-50542675)
chr4 (286-334)||(4544890-4544937)
chr4 (289-321)||(11795060-11795092)
chr4 (290-330)||(11795436-11795476)
chr4 (285-321)||(20534397-20534433)
chr4 (284-328)||(23135261-23135305)
chr4 (287-334)||(23552877-23552925)
chr4 (288-328)||(24623323-24623363)
chr4 (288-328)||(26017618-26017658)
chr4 (290-334)||(48149318-48149362)
[»] chr1 (80 HSPs)
chr1 (286-329)||(9962945-9962988)
chr1 (282-334)||(45670735-45670787)
chr1 (287-330)||(36157959-36158002)
chr1 (291-330)||(44978677-44978716)
chr1 (288-334)||(7609044-7609090)
chr1 (288-330)||(18917717-18917759)
chr1 (288-330)||(34971261-34971303)
chr1 (288-330)||(46051643-46051685)
chr1 (288-330)||(49594868-49594910)
chr1 (286-328)||(50099035-50099077)
chr1 (285-330)||(16508181-16508226)
chr1 (289-330)||(19274377-19274418)
chr1 (289-330)||(41105834-41105875)
chr1 (285-329)||(38473909-38473953)
chr1 (291-334)||(7651509-7651552)
chr1 (287-334)||(12964462-12964509)
chr1 (289-328)||(18781996-18782035)
chr1 (289-328)||(24204754-24204793)
chr1 (287-330)||(34969648-34969691)
chr1 (281-328)||(37217091-37217138)
chr1 (287-334)||(49094989-49095036)
chr1 (286-328)||(6711666-6711708)
chr1 (288-330)||(24204377-24204419)
chr1 (282-328)||(26549199-26549245)
chr1 (282-328)||(28425263-28425309)
chr1 (286-328)||(33325922-33325964)
chr1 (286-328)||(45670390-45670432)
chr1 (287-329)||(48802236-48802278)
chr1 (289-330)||(7651855-7651896)
chr1 (293-330)||(12142916-12142953)
chr1 (293-334)||(16706059-16706100)
chr1 (287-328)||(17990051-17990092)
chr1 (289-330)||(18782371-18782412)
chr1 (285-322)||(19274759-19274796)
chr1 (289-330)||(21965258-21965299)
chr1 (289-330)||(22351032-22351073)
chr1 (289-330)||(25800461-25800502)
chr1 (281-330)||(33673827-33673876)
chr1 (287-328)||(36781077-36781118)
chr1 (289-330)||(52146840-52146881)
chr1 (293-330)||(52147186-52147223)
chr1 (290-334)||(5400690-5400734)
chr1 (288-328)||(7552922-7552962)
chr1 (288-328)||(16705716-16705756)
chr1 (289-329)||(18917343-18917383)
chr1 (284-328)||(24036723-24036767)
chr1 (288-328)||(25800836-25800876)
chr1 (285-329)||(26070086-26070130)
chr1 (289-329)||(37216714-37216754)
chr1 (293-329)||(46825351-46825387)
chr1 (291-334)||(49094619-49094663)
chr1 (284-328)||(52067552-52067596)
chr1 (290-330)||(52350206-52350246)
chr1 (293-328)||(18892180-18892215)
chr1 (289-328)||(21929340-21929379)
chr1 (287-334)||(30281476-30281523)
chr1 (287-330)||(33194576-33194619)
chr1 (291-334)||(43380672-43380715)
chr1 (289-328)||(50533201-50533240)
chr1 (290-328)||(5401065-5401103)
chr1 (287-321)||(9879047-9879081)
chr1 (284-330)||(16505139-16505185)
chr1 (290-328)||(17983806-17983844)
chr1 (287-329)||(30281805-30281847)
chr1 (286-328)||(32373836-32373878)
chr1 (288-330)||(46825724-46825766)
chr1 (287-329)||(49595225-49595267)
chr1 (289-330)||(9878691-9878732)
chr1 (282-326)||(9962613-9962658)
chr1 (289-330)||(12964825-12964866)
chr1 (289-334)||(23767322-23767367)
chr1 (291-328)||(33194906-33194943)
chr1 (288-333)||(42509959-42510004)
chr1 (288-329)||(43396869-43396910)
chr1 (287-328)||(46051295-46051336)
chr1 (291-328)||(46095359-46095396)
chr1 (287-328)||(48669677-48669717)
chr1 (288-328)||(19315835-19315875)
chr1 (290-334)||(21929715-21929758)
chr1 (286-330)||(50690136-50690180)
[»] chr5 (69 HSPs)
chr5 (288-334)||(33003230-33003276)
chr5 (286-335)||(3352278-3352327)
chr5 (286-334)||(27457442-27457490)
chr5 (285-328)||(8689386-8689429)
chr5 (287-330)||(20408726-20408769)
chr5 (288-330)||(11001010-11001052)
chr5 (286-328)||(11935292-11935334)
chr5 (286-328)||(17002440-17002482)
chr5 (288-334)||(20079535-20079581)
chr5 (286-328)||(35861489-35861531)
chr5 (287-328)||(6600420-6600461)
chr5 (285-334)||(16751959-16752008)
chr5 (287-328)||(26035271-26035312)
chr5 (287-328)||(27457102-27457143)
chr5 (285-330)||(33760752-33760797)
chr5 (286-330)||(8215715-8215759)
chr5 (288-328)||(26593564-26593604)
chr5 (290-334)||(33760378-33760422)
chr5 (287-330)||(1827783-1827826)
chr5 (287-330)||(4016155-4016198)
chr5 (287-334)||(23129191-23129238)
chr5 (287-330)||(38964019-38964062)
chr5 (288-330)||(6252165-6252207)
chr5 (284-330)||(8689764-8689810)
chr5 (288-330)||(9919798-9919840)
chr5 (285-330)||(14717418-14717464)
chr5 (288-330)||(19661913-19661955)
chr5 (284-330)||(30863095-30863141)
chr5 (288-330)||(39125942-39125984)
chr5 (286-328)||(39401895-39401937)
chr5 (287-328)||(445129-445170)
chr5 (281-330)||(9919181-9919230)
chr5 (289-330)||(11000635-11000676)
chr5 (285-334)||(27116002-27116051)
chr5 (288-329)||(35341997-35342038)
chr5 (289-330)||(35342373-35342414)
chr5 (289-330)||(41282535-41282576)
chr5 (293-330)||(42263108-42263145)
chr5 (288-328)||(8216095-8216135)
chr5 (286-330)||(27116376-27116420)
chr5 (288-328)||(28078689-28078729)
chr5 (288-328)||(31710099-31710139)
chr5 (282-330)||(41282153-41282201)
chr5 (286-329)||(1052727-1052770)
chr5 (290-329)||(3351910-3351949)
chr5 (289-328)||(14620727-14620766)
chr5 (287-330)||(16095865-16095908)
chr5 (289-328)||(16752291-16752330)
chr5 (289-328)||(35155069-35155108)
chr5 (290-329)||(35155426-35155465)
chr5 (288-330)||(6251810-6251852)
chr5 (285-327)||(6331192-6331234)
chr5 (288-330)||(6600042-6600084)
chr5 (288-330)||(19659407-19659449)
chr5 (289-330)||(20408350-20408392)
chr5 (288-334)||(39824373-39824419)
chr5 (286-328)||(42993333-42993375)
chr5 (287-328)||(14717801-14717842)
chr5 (287-328)||(28078310-28078351)
chr5 (287-328)||(30298033-30298074)
chr5 (281-330)||(31710475-31710524)
chr5 (289-330)||(43166542-43166583)
chr5 (288-328)||(6332971-6333011)
chr5 (286-330)||(8694681-8694725)
chr5 (289-329)||(8695060-8695099)
chr5 (282-330)||(11935638-11935686)
chr5 (290-330)||(30208679-30208718)
chr5 (288-328)||(30863447-30863486)
chr5 (285-329)||(33002875-33002919)
[»] scaffold0117 (1 HSPs)
scaffold0117 (284-329)||(14491-14536)
[»] chr6 (38 HSPs)
chr6 (288-328)||(17942855-17942895)
chr6 (285-328)||(17428527-17428570)
chr6 (288-334)||(1077426-1077472)
chr6 (288-330)||(26393291-26393333)
chr6 (288-334)||(29050089-29050135)
chr6 (287-328)||(3258712-3258753)
chr6 (279-328)||(3259091-3259140)
chr6 (289-330)||(30457506-30457547)
chr6 (290-330)||(30378836-30378876)
chr6 (286-330)||(30379210-30379254)
chr6 (286-330)||(35224173-35224217)
chr6 (287-330)||(2598005-2598048)
chr6 (289-328)||(2643932-2643971)
chr6 (289-328)||(2707306-2707345)
chr6 (288-330)||(3408035-3408077)
chr6 (288-326)||(12626833-12626871)
chr6 (284-334)||(17428174-17428224)
chr6 (289-334)||(26936453-26936499)
chr6 (281-330)||(29050465-29050515)
chr6 (289-330)||(2707652-2707693)
chr6 (287-328)||(6503913-6503954)
chr6 (287-328)||(6785006-6785047)
chr6 (289-330)||(9382712-9382753)
chr6 (285-330)||(12613103-12613148)
chr6 (289-330)||(17943229-17943270)
chr6 (289-329)||(8178525-8178565)
chr6 (287-326)||(2390110-2390149)
chr6 (288-330)||(1915250-1915291)
chr6 (286-328)||(6785382-6785424)
chr6 (287-329)||(26392914-26392956)
chr6 (289-329)||(3408383-3408424)
chr6 (288-329)||(8178155-8178196)
chr6 (287-328)||(9382362-9382403)
chr6 (293-334)||(12612759-12612800)
chr6 (289-330)||(17514934-17514975)
chr6 (288-332)||(26936778-26936823)
chr6 (288-328)||(10256054-10256094)
chr6 (288-328)||(26230839-26230879)
[»] scaffold0727 (2 HSPs)
scaffold0727 (289-334)||(5374-5419)
scaffold0727 (287-334)||(4998-5046)
[»] scaffold0005 (1 HSPs)
scaffold0005 (290-329)||(252721-252760)
[»] scaffold0717 (1 HSPs)
scaffold0717 (285-330)||(2039-2084)
[»] scaffold0338 (1 HSPs)
scaffold0338 (289-330)||(5793-5834)
[»] scaffold0004 (2 HSPs)
scaffold0004 (285-334)||(219075-219124)
scaffold0004 (284-330)||(218669-218714)
[»] scaffold0096 (1 HSPs)
scaffold0096 (285-328)||(47776-47819)
[»] scaffold0031 (1 HSPs)
scaffold0031 (289-328)||(101285-101324)
[»] scaffold0693 (1 HSPs)
scaffold0693 (289-327)||(4935-4973)
[»] scaffold0122 (1 HSPs)
scaffold0122 (288-330)||(11182-11224)
[»] scaffold1986 (1 HSPs)
scaffold1986 (288-321)||(288-321)
[»] scaffold0416 (1 HSPs)
scaffold0416 (288-328)||(6589-6629)


Alignment Details
Target: chr7 (Bit Score: 265; Significance: 1e-148; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 8 - 328
Target Start/End: Complemental strand, 47281730 - 47281410
Alignment:
Q  8 gaatataaggatcaagttacttttgataaactaaggaccatatttattgaatagtagttttcaagtaaacacgcctttctttgttgggaaaaccttcact 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  47281730 gaatctaaggatcaagttacttttgataaactaaggaccatatttattgaacagtagttttcaagtaaacacgcctttctttgttgggaaaaccttcact 47281631  T
Q  108 gaaaaattaccatgcatggccacnnnnnnnntgaaaagtttaaaatctaaggaccatttgaaagtgcttcttatcttgtattgtactactagactactag 207  Q
    |||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47281630 gaaaaattaccatgcatggccacaaaaaaa-tgaaaagtttaaaatctaaggaccatttgaaagtgcttcttatcttgtattgtactactagactactag 47281532  T
Q  208 ttatccaacaagctcacgtttc-tttaatttgttgggaaaacctgcactagaaatttaagggaaaatttggatgtttttataggtcaaatgcatttaaag 306  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||    
T  47281531 ttatccaacaagctcacgtttcttttaatttgttgggaaaacctgcactagaaatttaagggaaaatttgtatgcttttataggtcaaatgcatctaaag 47281432  T
Q  307 gtcctttaagtttttcgttttt 328  Q
    ||||||||||||||||||||||    
T  47281431 gtcctttaagtttttcgttttt 47281410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 38 - 200
Target Start/End: Complemental strand, 47274970 - 47274810
Alignment:
Q  38 ctaaggaccatatttattgaatag-tagttttcaagtaaacacgcctttctttgttgggaaaaccttcactgaaaaattaccatgcatggccacnnnnnn 136  Q
    ||||||||||| ||||||||| |  ||||||||||  |||||||| |||  ||||||||||||||| |||||||||||||||||||||||||||          
T  47274970 ctaaggaccatgtttattgaacatatagttttcaaccaaacacgcgttt--ttgttgggaaaacctgcactgaaaaattaccatgcatggccacaacaaa 47274873  T
Q  137 nntgaaaagtttaaaatctaaggaccatttgaaa-gtgcttcttatcttgtattgtactactaga 200  Q
      |||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||    
T  47274872 --tgaaaagtttaaaatctaaggaccattacaaaagtgcttcttatcttgtattgtactactaga 47274810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 288 - 334
Target Start/End: Complemental strand, 11476880 - 11476834
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||    
T  11476880 aggtcaaatgcatctaaaggtcctttaagtttttcgtttttcctaaa 11476834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 30876494 - 30876452
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  30876494 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 30876452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 280 - 328
Target Start/End: Original strand, 4923022 - 4923070
Alignment:
Q  280 gtttttataggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||    
T  4923022 gtttttttaggtcaaatgcatttaaaggtcctttatgtttttcgttttt 4923070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 286 - 330
Target Start/End: Complemental strand, 43968585 - 43968541
Alignment:
Q  286 ataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||||| |||||||||||||||||||||||||||||    
T  43968585 ataggtcaaatgcatctaaaggtcctttaagtttttcgtttttcc 43968541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 329
Target Start/End: Original strand, 39033876 - 39033919
Alignment:
Q  286 ataggtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  39033876 ataggtcaaatgcatctaaaggtcctttaagtttttcgtttttc 39033919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 283 - 329
Target Start/End: Complemental strand, 45723820 - 45723774
Alignment:
Q  283 tttataggtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    |||||||||||||||||||||||| || |||||||||||||||||||    
T  45723820 tttataggtcaaatgcatttaaagatcatttaagtttttcgtttttc 45723774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 293 - 330
Target Start/End: Original strand, 5106071 - 5106108
Alignment:
Q  293 aaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||||||||||||||||||||||||||||    
T  5106071 aaatgcatttaaaggtcctttaagtttttcgtttttcc 5106108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 40851130 - 40851171
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  40851130 ggtcaaatgcatctaaaggtcctttaagtttttcgtttttcc 40851171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 334
Target Start/End: Complemental strand, 44551093 - 44551048
Alignment:
Q  290 gtcaaatgcatttaaaggtccttt-aagtttttcgtttttcctaaa 334  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  44551093 gtcaaatgcatttaaaggtccttttaagtttttcgtttttcctaaa 44551048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 48629043 - 48628998
Alignment:
Q  285 tataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||    
T  48629043 tataggtcaaatgcatctaaaggtcctttaagtttttcatttttcc 48628998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 335
Target Start/End: Complemental strand, 38427882 - 38427838
Alignment:
Q  291 tcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaat 335  Q
    |||||||||| |||||||||||||||||||| |||||||||||||    
T  38427882 tcaaatgcatctaaaggtcctttaagttttttgtttttcctaaat 38427838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 288 - 328
Target Start/End: Original strand, 47119837 - 47119877
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  47119837 aggtcaaatgcatctaaaggtcctttaagtttttcgttttt 47119877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 288 - 328
Target Start/End: Complemental strand, 47219380 - 47219340
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  47219380 aggtcaaatgcatttaaaggtcctttaagtttttcattttt 47219340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 287 - 330
Target Start/End: Original strand, 11476461 - 11476504
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||||| |||||||||||||||||||| ||||||||    
T  11476461 taggtcaaatgcatctaaaggtcctttaagttttttgtttttcc 11476504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 291 - 330
Target Start/End: Original strand, 29739521 - 29739560
Alignment:
Q  291 tcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  29739521 tcaaatgcatctaaaggtcctttaagtttttcgtttttcc 29739560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 287 - 330
Target Start/End: Original strand, 47218961 - 47219004
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||||| ||||||||||||||||||| |||||||||    
T  47218961 taggtcaaatgcatctaaaggtcctttaagttttacgtttttcc 47219004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 328
Target Start/End: Original strand, 47281030 - 47281069
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  47281030 ggtcaaatgcatctaaaggtcctttaagtttttcgttttt 47281069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 1469817 - 1469775
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||| |||| ||||||||||||||||||||||||    
T  1469817 aggtcaaatgcatctaaatgtcctttaagtttttcgtttttcc 1469775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 330
Target Start/End: Original strand, 27772982 - 27773024
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||| |||||||||||||||||||| ||||||||    
T  27772982 aggtcaaatgcatctaaaggtcctttaagtttttagtttttcc 27773024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 326
Target Start/End: Original strand, 31684040 - 31684078
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgttt 326  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  31684040 aggtcaaatgcatctaaaggtcctttaagtttttcgttt 31684078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 330
Target Start/End: Original strand, 47294197 - 47294239
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||| ||||||||||||||||||||| |||||||    
T  47294197 aggtcaaatgcatctaaaggtcctttaagtttttcatttttcc 47294239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 329
Target Start/End: Original strand, 2960546 - 2960587
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    ||||||||||||| ||||||||||||||||| ||||||||||    
T  2960546 aggtcaaatgcatctaaaggtcctttaagttgttcgtttttc 2960587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 290 - 335
Target Start/End: Complemental strand, 11050583 - 11050538
Alignment:
Q  290 gtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaat 335  Q
    |||||||| || ||||||||||||||||||||||||||||| ||||    
T  11050583 gtcaaatgtatctaaaggtcctttaagtttttcgtttttcccaaat 11050538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 334
Target Start/End: Original strand, 30798276 - 30798321
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    |||||||||||| |||||||| ||| ||||||||||||||||||||    
T  30798276 ggtcaaatgcatataaaggtcttttgagtttttcgtttttcctaaa 30798321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 328
Target Start/End: Original strand, 35600027 - 35600068
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||| ||||||||||||||||||||||||| |||||    
T  35600027 taggtcaaatacatttaaaggtcctttaagtttttcattttt 35600068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 291 - 328
Target Start/End: Complemental strand, 41139734 - 41139697
Alignment:
Q  291 tcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  41139734 tcaaatgcatttaaaggtcatttaagtttttcgttttt 41139697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 42888722 - 42888763
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  42888722 ggtcaaatgcatctaaaggtcatttaagtttttcgtttttcc 42888763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 328
Target Start/End: Complemental strand, 43753100 - 43753059
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||||| ||||||| |||||||||||||||||||    
T  43753100 taggtcaaatgcatctaaaggttctttaagtttttcgttttt 43753059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 328
Target Start/End: Original strand, 3797448 - 3797488
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||||| |||| ||||||||||||||||||||||    
T  3797448 aggtcaaatgcatctaaaagtcctttaagtttttcgttttt 3797488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 329
Target Start/End: Original strand, 23842152 - 23842192
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    |||||||||||| |||| |||||||||||||||||||||||    
T  23842152 ggtcaaatgcatctaaaagtcctttaagtttttcgtttttc 23842192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 328
Target Start/End: Complemental strand, 35600450 - 35600406
Alignment:
Q  284 ttataggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||||||||||||| |||| |||||||||| ||||||    
T  35600450 ttataggtcaaatgcatttaaaagtccattaagttttttgttttt 35600406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 328
Target Start/End: Original strand, 45723397 - 45723437
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||||| ||||||||||||||||||||| |||||    
T  45723397 aggtcaaatgcatctaaaggtcctttaagtttttcattttt 45723437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 328
Target Start/End: Original strand, 25801473 - 25801512
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||| ||||||||||||||||||||| |||||    
T  25801473 ggtcaaatgcatctaaaggtcctttaagtttttcattttt 25801512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 330
Target Start/End: Original strand, 37354188 - 37354231
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||| |||||| |||| ||||||||||||||||||||||||    
T  37354188 taggtcatatgcatctaaaagtcctttaagtttttcgtttttcc 37354231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 330
Target Start/End: Complemental strand, 37394322 - 37394279
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||| |||||||| ||||||| |||||||||||||||||||||    
T  37394322 taggttaaatgcatctaaaggttctttaagtttttcgtttttcc 37394279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 328
Target Start/End: Original strand, 42979245 - 42979284
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||| ||||||||||||||||||||| |||||    
T  42979245 ggtcaaatgcatctaaaggtcctttaagtttttcattttt 42979284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 328
Target Start/End: Complemental strand, 47294585 - 47294546
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||| ||||||||||||||||||||| |||||    
T  47294585 ggtcaaatgcatctaaaggtcctttaagtttttcattttt 47294546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 334
Target Start/End: Complemental strand, 4923411 - 4923365
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    |||| ||||| || ||||| |||||||||||||||||||||||||||    
T  4923411 aggttaaatgtatctaaagatcctttaagtttttcgtttttcctaaa 4923365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 334
Target Start/End: Complemental strand, 18353384 - 18353334
Alignment:
Q  284 ttataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    ||||| ||||||||||| |||| || ||||||||||||||||||| |||||    
T  18353384 ttataagtcaaatgcatctaaaagttctttaagtttttcgttttttctaaa 18353334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 27364663 - 27364621
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||| |||| |||||||||| |||||||||||||    
T  27364663 aggtcaaatgcatctaaatgtcctttaaggttttcgtttttcc 27364621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 320
Target Start/End: Complemental strand, 31684431 - 31684397
Alignment:
Q  286 ataggtcaaatgcatttaaaggtcctttaagtttt 320  Q
    ||||||||||||||| |||||||||||||||||||    
T  31684431 ataggtcaaatgcatctaaaggtcctttaagtttt 31684397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 330
Target Start/End: Original strand, 47271799 - 47271841
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||| |||| |||||||||||||||| |||||||    
T  47271799 aggtcaaatgcatctaaatgtcctttaagtttttcatttttcc 47271841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 47272216 - 47272174
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||| |||| |||||||||||||||| |||||||    
T  47272216 aggtcaaatgcatctaaatgtcctttaagtttttcatttttcc 47272174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 334
Target Start/End: Original strand, 1469400 - 1469445
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    ||||||||| || |||||||| |||||||||||| |||||||||||    
T  1469400 ggtcaaatgtatctaaaggtcttttaagtttttcatttttcctaaa 1469445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 334
Target Start/End: Complemental strand, 2960907 - 2960863
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    ||||||||| || |||||||| ||||||||||||||||||||||||    
T  2960907 ggtcaaatgtatctaaaggtc-tttaagtttttcgtttttcctaaa 2960863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 328
Target Start/End: Complemental strand, 7336291 - 7336254
Alignment:
Q  291 tcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  7336291 tcaaatgcatctaaaggtcctttaagtttttcattttt 7336254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 321
Target Start/End: Complemental strand, 31793947 - 31793910
Alignment:
Q  284 ttataggtcaaatgcatttaaaggtcctttaagttttt 321  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  31793947 ttataggtgaaatgcatctaaaggtcctttaagttttt 31793910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 328
Target Start/End: Original strand, 34378514 - 34378554
Alignment:
Q  289 ggtcaaatgcatttaaaggtcc-tttaagtttttcgttttt 328  Q
    |||||||||||||||||||||| |||||||||||| |||||    
T  34378514 ggtcaaatgcatttaaaggtccttttaagtttttcattttt 34378554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 330
Target Start/End: Original strand, 37393902 - 37393946
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaag-tttttcgtttttcc 330  Q
    |||||||||||||| |||| |||||||||| ||||||||||||||    
T  37393902 taggtcaaatgcatctaaaagtcctttaagttttttcgtttttcc 37393946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 6e-19; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 282 - 334
Target Start/End: Complemental strand, 24430902 - 24430850
Alignment:
Q  282 ttttataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  24430902 ttttataggtcaaatgcatctaaaggtcctttaagtttttcgtttttcctaaa 24430850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 288 - 328
Target Start/End: Complemental strand, 24193607 - 24193567
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  24193607 aggtcaaatgcatttaaaggtcctttaagtttttcgttttt 24193567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 291 - 334
Target Start/End: Complemental strand, 6016417 - 6016374
Alignment:
Q  291 tcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  6016417 tcaaatgcatctaaaggtcctttaagtttttcgtttttcctaaa 6016374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 287 - 330
Target Start/End: Original strand, 43468908 - 43468951
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  43468908 taggtcaaatgcatctaaaggtcctttaagtttttcgtttttcc 43468951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 287 - 334
Target Start/End: Original strand, 43806438 - 43806485
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  43806438 taggtcaaatgcattcaaaggtcctttaagtttttcgtttttcttaaa 43806485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 288 - 330
Target Start/End: Original strand, 9884673 - 9884715
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  9884673 aggtcaaatgcatctaaaggtcctttaagtttttcgtttttcc 9884715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 288 - 334
Target Start/End: Complemental strand, 33652076 - 33652030
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||    
T  33652076 aggtcaaatgcatctaaaggtcctttaagtttttcatttttcctaaa 33652030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 22684282 - 22684241
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  22684282 ggtcaaatgcatctaaaggtcctttaagtttttcgtttttcc 22684241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 288 - 328
Target Start/End: Original strand, 24430477 - 24430517
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  24430477 aggtcaaatgcatctaaaggtcctttaagtttttcgttttt 24430517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 328
Target Start/End: Original strand, 3875786 - 3875825
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  3875786 ggtcaaatgcatctaaaggtcctttaagtttttcgttttt 3875825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 329
Target Start/End: Original strand, 5720425 - 5720468
Alignment:
Q  286 ataggtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    ||||||||||||||| |||||||||||||||||||| |||||||    
T  5720425 ataggtcaaatgcatctaaaggtcctttaagttttttgtttttc 5720468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 287 - 330
Target Start/End: Original strand, 6016050 - 6016093
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  6016050 taggtcaaatgcatttaaaagtcctttaagtttttcatttttcc 6016093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 291 - 330
Target Start/End: Complemental strand, 7435094 - 7435055
Alignment:
Q  291 tcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  7435094 tcaaatgcatctaaaggtcctttaagtttttcgtttttcc 7435055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 291 - 330
Target Start/End: Complemental strand, 10162756 - 10162717
Alignment:
Q  291 tcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  10162756 tcaaatgcatttagaggtcctttaagtttttcgtttttcc 10162717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 287 - 330
Target Start/End: Original strand, 15846954 - 15846997
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||||| ||||||||||||||||| |||||||||||    
T  15846954 taggtcaaatgcatctaaaggtcctttaagttgttcgtttttcc 15846997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 35884337 - 35884380
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttccta 332  Q
    |||||||||||| ||||||||||||||||||||| |||||||||    
T  35884337 ggtcaaatgcatctaaaggtcctttaagtttttcatttttccta 35884380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 329
Target Start/End: Original strand, 18873889 - 18873931
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    ||||| ||||||||||||||||||||||||||||| |||||||    
T  18873889 taggtgaaatgcatttaaaggtcctttaagttttttgtttttc 18873931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 328
Target Start/End: Original strand, 4648966 - 4649007
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||||| |||| ||||||||||||||||||||||    
T  4648966 taggtcaaatgcatctaaaagtcctttaagtttttcgttttt 4649007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 328
Target Start/End: Original strand, 33651657 - 33651698
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||||| |||| ||||||||||||||||||||||    
T  33651657 taggtcaaatgcatctaaaagtcctttaagtttttcgttttt 33651698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 38107337 - 38107292
Alignment:
Q  285 tataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||||||| |||| |||||||||||||||| |||||||    
T  38107337 tataggtcaaatgcatctaaatgtcctttaagtttttcatttttcc 38107292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 334
Target Start/End: Complemental strand, 441073 - 441029
Alignment:
Q  290 gtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    |||||||| || ||||||||||||||||||||| |||||||||||    
T  441073 gtcaaatgtatctaaaggtcctttaagtttttcatttttcctaaa 441029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 327
Target Start/End: Complemental strand, 8137367 - 8137327
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttt 327  Q
    |||||||||||||| ||||||||||||||||||||| ||||    
T  8137367 taggtcaaatgcatctaaaggtcctttaagtttttcatttt 8137327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 330
Target Start/End: Complemental strand, 35443548 - 35443504
Alignment:
Q  286 ataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||||| ||||||||||||||| ||||| |||||||    
T  35443548 ataggtcaaatgcatctaaaggtcctttaagattttcatttttcc 35443504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 328
Target Start/End: Original strand, 41536433 - 41536473
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||||| ||||||||||||||||||||| |||||    
T  41536433 aggtcaaatgcatctaaaggtcctttaagtttttcattttt 41536473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 328
Target Start/End: Complemental strand, 260219 - 260172
Alignment:
Q  281 tttttataggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||| |||||||||||||| |||| |||||||||||||||| |||||    
T  260219 tttttttaggtcaaatgcatctaaatgtcctttaagtttttcattttt 260172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 330
Target Start/End: Original strand, 440656 - 440699
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||| ||| ||||| |||||||||||||||||||||||    
T  440656 taggtcaaatacatctaaagatcctttaagtttttcgtttttcc 440699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 328
Target Start/End: Original strand, 655702 - 655749
Alignment:
Q  281 tttttataggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||| |||||||||||||| |||| |||||||||||||||| |||||    
T  655702 tttttttaggtcaaatgcatctaaatgtcctttaagtttttcattttt 655749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 328
Target Start/End: Original strand, 841437 - 841484
Alignment:
Q  281 tttttataggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||| |||||||||||||| |||| |||||||||||||||| |||||    
T  841437 tttttttaggtcaaatgcatctaaatgtcctttaagtttttcattttt 841484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 334
Target Start/End: Complemental strand, 15847352 - 15847301
Alignment:
Q  283 tttataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    |||||||||||||||||| | |||||  |||||||||||| |||||||||||    
T  15847352 tttataggtcaaatgcatcttaaggttttttaagtttttcatttttcctaaa 15847301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 329
Target Start/End: Complemental strand, 23972619 - 23972580
Alignment:
Q  290 gtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    ||||||||||| ||||| ||||||||||||||||||||||    
T  23972619 gtcaaatgcatctaaagctcctttaagtttttcgtttttc 23972580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 330
Target Start/End: Original strand, 36399975 - 36400018
Alignment:
Q  288 aggtcaaatgcatttaaaggtcc-tttaagtttttcgtttttcc 330  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  36399975 aggtcaaatgcatctaaaggtccttttaagtttttcgtttttcc 36400018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 328
Target Start/End: Complemental strand, 36739645 - 36739606
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||| ||| |||||||||||||||||||||||||||    
T  36739645 ggtcaaatacatctaaaggtcctttaagtttttcgttttt 36739606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 13797323 - 13797281
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||| |||||||| |||||||||||| |||||||    
T  13797323 aggtcaaatgcatctaaaggtcttttaagtttttcatttttcc 13797281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 330
Target Start/End: Original strand, 22683894 - 22683936
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||| ||||| ||||||||||||||| |||||||    
T  22683894 aggtcaaatgcatctaaagctcctttaagtttttcatttttcc 22683936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 328
Target Start/End: Complemental strand, 40302214 - 40302176
Alignment:
Q  290 gtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||  ||||||||||||||||||||||||||    
T  40302214 gtcaaatgcatcaaaaggtcctttaagtttttcgttttt 40302176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 328
Target Start/End: Complemental strand, 513543 - 513502
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||||| |||| |||||||||||||||| |||||    
T  513543 taggtcaaatgcatctaaaagtcctttaagtttttcattttt 513502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 329
Target Start/End: Original strand, 1293304 - 1293345
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    ||||||||||||| |||| || ||||||||||||||||||||    
T  1293304 aggtcaaatgcatctaaatgttctttaagtttttcgtttttc 1293345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 12010398 - 12010438
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  12010398 ggtcaaatgcatctaaaggtc-tttaagtttttcgtttttcc 12010438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 321
Target Start/End: Original strand, 23972200 - 23972233
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagttttt 321  Q
    ||||||||||||| ||||||||||||||||||||    
T  23972200 aggtcaaatgcatataaaggtcctttaagttttt 23972233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 37933876 - 37933835
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||| |||| |||||||||||||||| |||||||    
T  37933876 ggtcaaatgcatctaaaagtcctttaagtttttcatttttcc 37933835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 334
Target Start/End: Original strand, 38633613 - 38633662
Alignment:
Q  285 tataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    |||||||||||||| | |||||||| ||||||||||| |||||| |||||    
T  38633613 tataggtcaaatgcgtctaaaggtcttttaagttttttgttttttctaaa 38633662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 330
Target Start/End: Original strand, 2533083 - 2533131
Alignment:
Q  283 tttataggtcaaatgcatttaaaggtcctttaag-tttttcgtttttcc 330  Q
    |||| |||| |||||||| ||||||||||||||| ||||||||||||||    
T  2533083 tttaaaggttaaatgcatctaaaggtcctttaagttttttcgtttttcc 2533131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 330
Target Start/End: Complemental strand, 3876137 - 3876101
Alignment:
Q  294 aatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||| ||||||||||||||||||||| |||||||    
T  3876137 aatgcatctaaaggtcctttaagtttttcatttttcc 3876101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 321
Target Start/End: Complemental strand, 9056690 - 9056658
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagttttt 321  Q
    |||||||||||| ||||||||||||||||||||    
T  9056690 ggtcaaatgcatctaaaggtcctttaagttttt 9056658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 287 - 334
Target Start/End: Complemental strand, 52821386 - 52821339
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  52821386 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 52821339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 286 - 334
Target Start/End: Complemental strand, 12748597 - 12748549
Alignment:
Q  286 ataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  12748597 ataggtcaaatgcatttaaaggtcctttaagttttacgtttttcctaaa 12748549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 329
Target Start/End: Original strand, 19664356 - 19664399
Alignment:
Q  286 ataggtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  19664356 ataggtcaaatgcatctaaaggtcctttaagtttttcgtttttc 19664399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 287 - 330
Target Start/End: Original strand, 21564341 - 21564384
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  21564341 taggtcaaatgcatctaaaggtcctttaagtttttcgtttttcc 21564384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 285 - 328
Target Start/End: Complemental strand, 21656756 - 21656713
Alignment:
Q  285 tataggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  21656756 tataggtcaaatgcatctaaaggtcctttaagtttttcgttttt 21656713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 288 - 330
Target Start/End: Original strand, 1016890 - 1016932
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  1016890 aggtcaaatgcatctaaaggtcctttaagtttttcgtttttcc 1016932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 8097256 - 8097214
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  8097256 aggtcaaatgcatctaaaggtcctttaagtttttcgtttttcc 8097214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 36315296 - 36315254
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  36315296 aggtcaaatgcatctaaaggtcctttaagtttttcgtttttcc 36315254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 329
Target Start/End: Original strand, 1448641 - 1448682
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  1448641 aggtcaaatgcatctaaaggtcctttaagtttttcgtttttc 1448682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 1687498 - 1687539
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  1687498 ggtcaaatgcatctaaaggtcctttaagtttttcgtttttcc 1687539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 19229284 - 19229243
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  19229284 ggtcaaatgcatctaaaggtcctttaagtttttcgtttttcc 19229243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 328
Target Start/End: Complemental strand, 20760396 - 20760355
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  20760396 taggtcaaatgcatctaaaggtcctttaagtttttcgttttt 20760355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 288 - 328
Target Start/End: Original strand, 38446294 - 38446334
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  38446294 aggtcaaatgcatctaaaggtcctttaagtttttcgttttt 38446334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 288 - 328
Target Start/End: Original strand, 44152517 - 44152557
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  44152517 aggtcaaatgcatctaaaggtcctttaagtttttcgttttt 44152557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 286 - 330
Target Start/End: Original strand, 50287381 - 50287425
Alignment:
Q  286 ataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||    
T  50287381 ataggtcaaatgcatctaaaggtcctttaagtttttcatttttcc 50287425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 290 - 330
Target Start/End: Complemental strand, 53196246 - 53196206
Alignment:
Q  290 gtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  53196246 gtcaaatgcatctaaaggtcctttaagtttttcgtttttcc 53196206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 288 - 334
Target Start/End: Complemental strand, 10618776 - 10618729
Alignment:
Q  288 aggtcaaatgcatttaaaggtccttt-aagtttttcgtttttcctaaa 334  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||    
T  10618776 aggtcaaatgcatctaaaggtccttttaagtttttcgtttttcctaaa 10618729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 287 - 330
Target Start/End: Complemental strand, 20813766 - 20813723
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||||| |||||||||||||| ||||||||||||||    
T  20813766 taggtcaaatgcatctaaaggtcctttaaatttttcgtttttcc 20813723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 287 - 330
Target Start/End: Complemental strand, 31122898 - 31122855
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||||| |||||||||||||| ||||||||||||||    
T  31122898 taggtcaaatgcatctaaaggtcctttaactttttcgtttttcc 31122855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 287 - 330
Target Start/End: Complemental strand, 33151961 - 33151918
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||||| ||||||||||||||||||||| |||||||    
T  33151961 taggtcaaatgcatctaaaggtcctttaagtttttcatttttcc 33151918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 329
Target Start/End: Original strand, 41250736 - 41250775
Alignment:
Q  290 gtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  41250736 gtcaaatgcatctaaaggtcctttaagtttttcgtttttc 41250775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 328
Target Start/End: Complemental strand, 47329505 - 47329458
Alignment:
Q  281 tttttataggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||| |||||||||||||| ||||||| |||||||||||||||||||    
T  47329505 tttttttaggtcaaatgcatctaaaggttctttaagtttttcgttttt 47329458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 287 - 330
Target Start/End: Original strand, 48651064 - 48651107
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||||| |||| ||||||||||||||||||||||||    
T  48651064 taggtcaaatgcatctaaatgtcctttaagtttttcgtttttcc 48651107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 1449035 - 1448985
Alignment:
Q  280 gtttttataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||| | |||||||||||| ||||||||||||||||||| |||||||||    
T  1449035 gttttttttggtcaaatgcatctaaaggtcctttaagttttccgtttttcc 1448985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 329
Target Start/End: Complemental strand, 1687887 - 1687845
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    |||||||||||||| ||||||||||||||||||||| ||||||    
T  1687887 taggtcaaatgcatctaaaggtcctttaagtttttcatttttc 1687845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 327
Target Start/End: Original strand, 10618388 - 10618426
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttt 327  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  10618388 ggtcaaatgcatctaaaggtcctttaagtttttcgtttt 10618426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 21564731 - 21564689
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  21564731 aggtcaaatgcatctaaagatcctttaagtttttcgtttttcc 21564689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 334
Target Start/End: Original strand, 35346377 - 35346423
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    |||||||| |||| ||||||||||||||||||||| |||||||||||    
T  35346377 aggtcaaacgcatctaaaggtcctttaagtttttcatttttcctaaa 35346423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 49799387 - 49799345
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||| ||||||||||| |||||||||||||||||    
T  49799387 aggtcaaatgcatctaaaggtccttaaagtttttcgtttttcc 49799345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 334
Target Start/End: Complemental strand, 51562397 - 51562351
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    ||||||||||||| |||| || |||||||||||||||||||||||||    
T  51562397 aggtcaaatgcatctaaaagttctttaagtttttcgtttttcctaaa 51562351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 29677710 - 29677669
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||| ||||||||||||||||||||| |||||||    
T  29677710 ggtcaaatgcatctaaaggtcctttaagtttttcatttttcc 29677669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 281 - 334
Target Start/End: Original strand, 32650719 - 32650772
Alignment:
Q  281 tttttataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    ||||||||||||||||| || |||| ||| |||||||||||||||||| |||||    
T  32650719 tttttataggtcaaatggatctaaatgtcatttaagtttttcgttttttctaaa 32650772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 329
Target Start/End: Complemental strand, 35608425 - 35608384
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    ||||||||||||| ||| ||||||||||||||||||||||||    
T  35608425 aggtcaaatgcatctaacggtcctttaagtttttcgtttttc 35608384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 293 - 330
Target Start/End: Original strand, 45380171 - 45380208
Alignment:
Q  293 aaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||||||| |||||||||||||||||||||    
T  45380171 aaatgcatttaaaggttctttaagtttttcgtttttcc 45380208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 329
Target Start/End: Original strand, 49799017 - 49799058
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    ||||||||||||| |||||||||||||||||||| |||||||    
T  49799017 aggtcaaatgcatctaaaggtcctttaagttttttgtttttc 49799058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 53195832 - 53195873
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||| |||||||| |||||||||||||||||||||    
T  53195832 ggtcaaatgcacttaaaggttctttaagtttttcgtttttcc 53195873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 329
Target Start/End: Complemental strand, 55164439 - 55164398
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    ||||||||| ||| ||||||||||||||||||||||||||||    
T  55164439 aggtcaaatacatctaaaggtcctttaagtttttcgtttttc 55164398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 328
Target Start/End: Complemental strand, 21890405 - 21890365
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||||| |||| ||||||||||||||||||||||    
T  21890405 aggtcaaatgcatctaaaagtcctttaagtttttcgttttt 21890365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 328
Target Start/End: Original strand, 22851813 - 22851853
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||||| ||||||||| |||||||||||||||||    
T  22851813 aggtcaaatgcatctaaaggtccgttaagtttttcgttttt 22851853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 328
Target Start/End: Complemental strand, 32651144 - 32651104
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||| |||||||| |||||||||||||||||||||||||||    
T  32651144 aggtgaaatgcatctaaaggtcctttaagtttttcgttttt 32651104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 328
Target Start/End: Complemental strand, 44152908 - 44152868
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||||| ||||||||||||||||||||| |||||    
T  44152908 aggtcaaatgcatctaaaggtcctttaagtttttcattttt 44152868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 330
Target Start/End: Original strand, 28775383 - 28775426
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||||| |||||||| |||||||||| |||||||||    
T  28775383 taggtcaaatgcatctaaaggtcttttaagttttacgtttttcc 28775426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 328
Target Start/End: Original strand, 34019337 - 34019376
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||| ||| |||||||||||||||||||||||||||    
T  34019337 ggtcaaatacatctaaaggtcctttaagtttttcgttttt 34019376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 279 - 334
Target Start/End: Original strand, 40922063 - 40922117
Alignment:
Q  279 tgtttttataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    |||||||  ||||||||||||| ||| ||||||||||||||||| |||||||||||    
T  40922063 tgttttttaaggtcaaatgcatctaa-ggtcctttaagtttttcatttttcctaaa 40922117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 328
Target Start/End: Original strand, 47329082 - 47329121
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||| ||||||| |||||||||||||||||||    
T  47329082 ggtcaaatgcatctaaaggttctttaagtttttcgttttt 47329121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 330
Target Start/End: Original strand, 47473075 - 47473118
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||||| ||||| | |||||||||||||||||||||    
T  47473075 taggtcaaatgcatctaaagattctttaagtttttcgtttttcc 47473118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 329
Target Start/End: Original strand, 12748236 - 12748278
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    |||||||||||  | ||||||||||||||||||||||||||||    
T  12748236 taggtcaaatgtctctaaaggtcctttaagtttttcgtttttc 12748278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 329
Target Start/End: Complemental strand, 50978080 - 50978038
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    |||||||||||||| ||||||| |||||||||||| |||||||    
T  50978080 taggtcaaatgcatctaaaggtactttaagttttttgtttttc 50978038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 329
Target Start/End: Complemental strand, 51081212 - 51081170
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    |||||||||||||| ||||||| |||||||||||| |||||||    
T  51081212 taggtcaaatgcatctaaaggtactttaagttttttgtttttc 51081170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 327
Target Start/End: Original strand, 52820952 - 52820994
Alignment:
Q  285 tataggtcaaatgcatttaaaggtcctttaagtttttcgtttt 327  Q
    ||||||| ||||||||| ||||||||||| |||||||||||||    
T  52820952 tataggttaaatgcattcaaaggtccttttagtttttcgtttt 52820994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 19268760 - 19268720
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  19268760 ggtcaaatgcatctaaaggtc-tttaagtttttcgtttttcc 19268720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 21656336 - 21656377
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||| |||||||| ||||||||||| ||||||||    
T  21656336 ggtcaaatgcatctaaaggtcttttaagttttttgtttttcc 21656377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 27071062 - 27071021
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||  ||| |||||||||||||||||||||||||||||    
T  27071062 ggtcaaagacatctaaaggtcctttaagtttttcgtttttcc 27071021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 328
Target Start/End: Original strand, 29677351 - 29677392
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||| || |||||||||||||||||||| ||||||    
T  29677351 taggtcaaatgtatctaaaggtcctttaagttttttgttttt 29677392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 334
Target Start/End: Original strand, 50977712 - 50977756
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    |||||||||||| |||||||| |||||||||||||||||| |||||    
T  50977712 ggtcaaatgcatctaaaggtc-tttaagtttttcgttttttctaaa 50977756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 334
Target Start/End: Original strand, 51080844 - 51080888
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    |||||||||||| |||||||| |||||||||||||||||| |||||    
T  51080844 ggtcaaatgcatctaaaggtc-tttaagtttttcgttttttctaaa 51080888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 51475541 - 51475501
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  51475541 ggtcaaatgcatctaaaggtc-tttaagtttttcgtttttcc 51475501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 328
Target Start/End: Complemental strand, 53926305 - 53926264
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||||| ||||||||| |||| ||||||||||||    
T  53926305 taggtcaaatgcatctaaaggtccattaaatttttcgttttt 53926264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 330
Target Start/End: Complemental strand, 1017277 - 1017237
Alignment:
Q  290 gtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||| |||||||| |||||||||||| |||||||    
T  1017277 gtcaaatgcatctaaaggtcttttaagtttttcatttttcc 1017237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 329
Target Start/End: Original strand, 19228887 - 19228927
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    |||||||||||| |||| ||||||||||||||| |||||||    
T  19228887 ggtcaaatgcatctaaatgtcctttaagttttttgtttttc 19228927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 328
Target Start/End: Original strand, 20086220 - 20086260
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||||| |||||||||||||| ||||| ||||||    
T  20086220 aggtcaaatgcatctaaaggtcctttaaattttttgttttt 20086260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 321
Target Start/End: Complemental strand, 20914078 - 20914046
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagttttt 321  Q
    |||||||||||| ||||||||||||||||||||    
T  20914078 ggtcaaatgcatctaaaggtcctttaagttttt 20914046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 321
Target Start/End: Complemental strand, 20922196 - 20922164
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagttttt 321  Q
    |||||||||||| ||||||||||||||||||||    
T  20922196 ggtcaaatgcatctaaaggtcctttaagttttt 20922164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 329
Target Start/End: Original strand, 28193248 - 28193288
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    ||||||||| || ||||||||||||||||||||| ||||||    
T  28193248 ggtcaaatgtatctaaaggtcctttaagtttttcatttttc 28193288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 321
Target Start/End: Complemental strand, 50365184 - 50365152
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagttttt 321  Q
    ||||||||||||||||||||| |||||||||||    
T  50365184 ggtcaaatgcatttaaaggtcttttaagttttt 50365152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 1e-16; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 2094712 - 2094664
Alignment:
Q  281 tttttataggtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  2094712 ttttaataggtcaaatgcatttaaaggtcctttaagtttttcgtttttc 2094664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 282 - 330
Target Start/End: Original strand, 23671712 - 23671760
Alignment:
Q  282 ttttataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  23671712 ttttataggtcaaatgcatctaaaggtcctttaagtttttcgtttttcc 23671760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 287 - 334
Target Start/End: Complemental strand, 8396847 - 8396800
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  8396847 taggttaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 8396800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 287 - 330
Target Start/End: Complemental strand, 28650753 - 28650710
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  28650753 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 28650710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 287 - 330
Target Start/End: Complemental strand, 33107294 - 33107251
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  33107294 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 33107251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 285 - 334
Target Start/End: Complemental strand, 37838535 - 37838486
Alignment:
Q  285 tataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  37838535 tataggtcaaatgcatctaaaggtcctttaagtttttcatttttcctaaa 37838486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 283 - 334
Target Start/End: Original strand, 3430526 - 3430577
Alignment:
Q  283 tttataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||||||    
T  3430526 tttaaaggtcaaatgcatctaaaggttctttaagtttttcgtttttcctaaa 3430577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 288 - 330
Target Start/End: Original strand, 920839 - 920881
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  920839 aggtcaaatgcatctaaaggtcctttaagtttttcgtttttcc 920881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 283 - 329
Target Start/End: Complemental strand, 36444557 - 36444511
Alignment:
Q  283 tttataggtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||    
T  36444557 tttaaaggtcaaatgcatttaaatgtcctttaagtttttcgtttttc 36444511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 290 - 334
Target Start/End: Original strand, 19915915 - 19915959
Alignment:
Q  290 gtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||    
T  19915915 gtcaaatgcatctaaaagtcctttaagtttttcgtttttcctaaa 19915959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 286 - 330
Target Start/End: Complemental strand, 23673199 - 23673155
Alignment:
Q  286 ataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||    
T  23673199 ataggtcaaatgcatctaaaagtcctttaagtttttcgtttttcc 23673155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 284 - 328
Target Start/End: Complemental strand, 27328823 - 27328779
Alignment:
Q  284 ttataggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||    
T  27328823 ttataggtcaaatgcatctaaaggtcctttaagtttttcattttt 27328779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 288 - 328
Target Start/End: Complemental strand, 36211282 - 36211242
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  36211282 aggtcaaatgcatctaaaggtcctttaagtttttcgttttt 36211242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 281 - 321
Target Start/End: Complemental strand, 37654336 - 37654296
Alignment:
Q  281 tttttataggtcaaatgcatttaaaggtcctttaagttttt 321  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  37654336 tttttataggtcaaatgcatctaaaggtcctttaagttttt 37654296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 284 - 328
Target Start/End: Original strand, 37838093 - 37838137
Alignment:
Q  284 ttataggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||||| || |||||||||||||||||||||||||||    
T  37838093 ttataggtcaaatgtatctaaaggtcctttaagtttttcgttttt 37838137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 284 - 327
Target Start/End: Complemental strand, 2057164 - 2057121
Alignment:
Q  284 ttataggtcaaatgcatttaaaggtcctttaagtttttcgtttt 327  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||    
T  2057164 ttataggtcaaatgcatctaaaggtcctttaagtttttcatttt 2057121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 287 - 334
Target Start/End: Original strand, 28650331 - 28650378
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    |||||||||||||| ||||||||||||||||||||| |||| ||||||    
T  28650331 taggtcaaatgcatctaaaggtcctttaagtttttcattttccctaaa 28650378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 328
Target Start/End: Complemental strand, 41178342 - 41178303
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  41178342 ggtcaaatgcatctaaaggtcctttaagtttttcgttttt 41178303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 330
Target Start/End: Original strand, 771878 - 771924
Alignment:
Q  284 ttataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||| |||||||||||| ||||||||||||||||||||| |||||||    
T  771878 ttattggtcaaatgcatctaaaggtcctttaagtttttcatttttcc 771924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 334
Target Start/End: Original strand, 27328400 - 27328450
Alignment:
Q  285 tataggtcaaatgcatttaaaggtcctttaag-tttttcgtttttcctaaa 334  Q
    |||||||||||||||| |||| |||||||||| ||||||||||||||||||    
T  27328400 tataggtcaaatgcatctaaatgtcctttaagttttttcgtttttcctaaa 27328450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 31214141 - 31214099
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||| |||||||| ||||||||||||||||||||    
T  31214141 aggtcaaatgcatctaaaggtcttttaagtttttcgtttttcc 31214099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 330
Target Start/End: Original strand, 37732099 - 37732141
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||| ||||||||||||||||||||| |||||||    
T  37732099 aggtcaaatgcatctaaaggtcctttaagtttttcatttttcc 37732141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 41500817 - 41500775
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||| |||||||| ||||||||||||||||||||    
T  41500817 aggtcaaatgcatctaaaggtcatttaagtttttcgtttttcc 41500775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 329
Target Start/End: Original strand, 42629801 - 42629843
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  42629801 taggtcaaatgcatctaaagatcctttaagtttttcgtttttc 42629843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 42630197 - 42630155
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||| |||||||| ||||||||||||||||||||    
T  42630197 aggtcaaatgcatctaaaggtcttttaagtttttcgtttttcc 42630155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 334
Target Start/End: Complemental strand, 9276808 - 9276763
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    |||||||||||| |||||||| |||||||||||| |||||||||||    
T  9276808 ggtcaaatgcatctaaaggtcatttaagtttttcatttttcctaaa 9276763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 12759657 - 12759698
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||| ||||||||||||||||||||| |||||||    
T  12759657 ggtcaaatgcatctaaaggtcctttaagtttttcatttttcc 12759698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 326
Target Start/End: Complemental strand, 16246516 - 16246479
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgttt 326  Q
    |||||||||||| |||||||||||||||||||||||||    
T  16246516 ggtcaaatgcatctaaaggtcctttaagtttttcgttt 16246479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 329
Target Start/End: Original strand, 17484456 - 17484497
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    ||||||||||||| ||||||| ||||||||||||||||||||    
T  17484456 aggtcaaatgcatctaaaggttctttaagtttttcgtttttc 17484497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 41500409 - 41500450
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||| ||||||||||||||||||||| |||||||    
T  41500409 ggtcaaatgcatctaaaggtcctttaagtttttcatttttcc 41500450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 328
Target Start/End: Original strand, 2094317 - 2094357
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||||| ||||||||||||||||||||| |||||    
T  2094317 aggtcaaatgcatctaaaggtcctttaagtttttcattttt 2094357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 329
Target Start/End: Complemental strand, 2315297 - 2315257
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    ||||||||| || ||||||||||||||||||||||||||||    
T  2315297 ggtcaaatgtatctaaaggtcctttaagtttttcgtttttc 2315257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 330
Target Start/End: Complemental strand, 2456247 - 2456203
Alignment:
Q  286 ataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||||| |||| |||||||||||||||| |||||||    
T  2456247 ataggtcaaatgcatctaaaagtcctttaagtttttcatttttcc 2456203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 334
Target Start/End: Complemental strand, 22066714 - 22066670
Alignment:
Q  290 gtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    ||||||||||| ||||| || ||||||||||||||||||||||||    
T  22066714 gtcaaatgcatctaaagatcttttaagtttttcgtttttcctaaa 22066670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 330
Target Start/End: Complemental strand, 33865589 - 33865549
Alignment:
Q  290 gtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||| |||||||| ||||||||||||||||||||    
T  33865589 gtcaaatgcatctaaaggtcttttaagtttttcgtttttcc 33865549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 328
Target Start/End: Complemental strand, 37732488 - 37732448
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||||||||||||||||||| ||||||| ||||    
T  37732488 aggtcaaatgcatttaaaggtcctttaattttttcgatttt 37732448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 328
Target Start/End: Complemental strand, 8899915 - 8899876
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||| ||||||||||||||||||||| |||||    
T  8899915 ggtcaaatgcatctaaaggtcctttaagtttttcattttt 8899876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 329
Target Start/End: Original strand, 22066573 - 22066616
Alignment:
Q  286 ataggtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    ||||||||||||||| |||||||||||| |||||||| ||||||    
T  22066573 ataggtcaaatgcatctaaaggtcctttcagtttttcatttttc 22066616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 328
Target Start/End: Complemental strand, 29737982 - 29737943
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||| ||||| |||||||||||||||||||||    
T  29737982 ggtcaaatgcatataaagatcctttaagtttttcgttttt 29737943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 31187467 - 31187424
Alignment:
Q  288 aggtcaaatgcatttaaaggtcc-tttaagtttttcgtttttcc 330  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  31187467 aggtcaaatgcatctaaaggtccttttaagtttttcgtttttcc 31187424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 31195527 - 31195484
Alignment:
Q  288 aggtcaaatgcatttaaaggtcc-tttaagtttttcgtttttcc 330  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  31195527 aggtcaaatgcatctaaaggtccttttaagtttttcgtttttcc 31195484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 291 - 330
Target Start/End: Original strand, 43249321 - 43249360
Alignment:
Q  291 tcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||| ||||||||||||||||||||| |||||||    
T  43249321 tcaaatgcatctaaaggtcctttaagtttttcatttttcc 43249360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 321
Target Start/End: Original strand, 38750863 - 38750897
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagttttt 321  Q
    |||||||||||||| ||||||||||||||||||||    
T  38750863 taggtcaaatgcatctaaaggtcctttaagttttt 38750897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 772272 - 772228
Alignment:
Q  285 tataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||||||| |||| ||| ||||||||||||||||||||    
T  772272 tataggtcaaatgcatctaaatgtc-tttaagtttttcgtttttcc 772228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 9276388 - 9276433
Alignment:
Q  285 tataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||| ||||||||||| |||| |||||||||||||||| |||||||    
T  9276388 tatatgtcaaatgcatataaatgtcctttaagtttttcatttttcc 9276433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 9331579 - 9331624
Alignment:
Q  285 tataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||| ||||||||||| |||| |||||||||||||||| |||||||    
T  9331579 tatatgtcaaatgcatataaatgtcctttaagtttttcatttttcc 9331624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 328
Target Start/End: Original strand, 11949331 - 11949372
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||||| |||| |||||||||||||||| |||||    
T  11949331 taggtcaaatgcatctaaaagtcctttaagtttttcattttt 11949372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 328
Target Start/End: Complemental strand, 12760074 - 12760033
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||| || |||||||| ||||||||||||||||||    
T  12760074 taggtcaaatgtatctaaaggtcatttaagtttttcgttttt 12760033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 328
Target Start/End: Complemental strand, 17484871 - 17484834
Alignment:
Q  291 tcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  17484871 tcaaatgcatctaaagctcctttaagtttttcgttttt 17484834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 28216872 - 28216912
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||||||||| || ||||||||||||||||||||    
T  28216872 ggtcaaatgcatttaaagatc-tttaagtttttcgtttttcc 28216912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 334
Target Start/End: Original strand, 36210856 - 36210909
Alignment:
Q  281 tttttataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    |||||| | ||||||||||| | ||||| ||||||||||||||||||| |||||    
T  36210856 tttttaaatgtcaaatgcatctgaaggttctttaagtttttcgttttttctaaa 36210909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 328
Target Start/End: Complemental strand, 38751283 - 38751242
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||||| ||| | |||||||||||||||||||||    
T  38751283 taggtcaaatgcatctaatgatcctttaagtttttcgttttt 38751242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 40854843 - 40854802
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||| |||||| ||||||||||||||||||||| |||||||    
T  40854843 ggtcagatgcatctaaaggtcctttaagtttttcatttttcc 40854802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 328
Target Start/End: Original strand, 45123967 - 45124004
Alignment:
Q  291 tcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||| ||||||| |||||||||||||||||||    
T  45123967 tcaaatgcatctaaaggttctttaagtttttcgttttt 45124004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 330
Target Start/End: Original strand, 2056758 - 2056786
Alignment:
Q  302 taaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||||||||||||||||||||    
T  2056758 taaaggtcctttaagtttttcgtttttcc 2056786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 330
Target Start/End: Complemental strand, 14630846 - 14630806
Alignment:
Q  290 gtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||| |||| |||||||||||||||| |||||||    
T  14630846 gtcaaatgcatgtaaaagtcctttaagtttttcatttttcc 14630806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 282 - 329
Target Start/End: Original strand, 12906 - 12953
Alignment:
Q  282 ttttataggtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||    
T  12906 ttttctaggtcaaatgcatttaaaggtcctttaagtttttcgtttttc 12953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 282 - 329
Target Start/End: Complemental strand, 59938 - 59891
Alignment:
Q  282 ttttataggtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||    
T  59938 ttttctaggtcaaatgcatttaaaggtcctttaagtttttcgtttttc 59891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 5e-16; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 287 - 330
Target Start/End: Original strand, 12196294 - 12196337
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  12196294 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 12196337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 282 - 330
Target Start/End: Original strand, 28264483 - 28264531
Alignment:
Q  282 ttttataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  28264483 ttttaaaggtcaaatgcatctaaaggtcctttaagtttttcgtttttcc 28264531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 286 - 334
Target Start/End: Complemental strand, 30141403 - 30141355
Alignment:
Q  286 ataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    ||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  30141403 ataggtcaaatgcatctaaaggtcctttaagtttttcgttttttctaaa 30141355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 287 - 330
Target Start/End: Complemental strand, 17847449 - 17847406
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  17847449 taggtcaaatgcatctaaaggtcctttaagtttttcgtttttcc 17847406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 287 - 330
Target Start/End: Complemental strand, 19169091 - 19169048
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  19169091 taggtcaaatgcatctaaaggtcctttaagtttttcgtttttcc 19169048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 328
Target Start/End: Original strand, 26017262 - 26017309
Alignment:
Q  281 tttttataggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||    
T  26017262 tttttttaggtcaaatgcatctaaaggtcctttaagtttttcgttttt 26017309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 287 - 330
Target Start/End: Complemental strand, 28160280 - 28160237
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  28160280 taggtcaaatgcatctaaaggtcctttaagtttttcgtttttcc 28160237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 283 - 330
Target Start/End: Original strand, 31208560 - 31208607
Alignment:
Q  283 tttataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||||    
T  31208560 tttattggtcaaatgcatctaaaggtcctttaagtttttcgtttttcc 31208607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 286 - 328
Target Start/End: Complemental strand, 5227627 - 5227585
Alignment:
Q  286 ataggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  5227627 ataggtcaaatgcatctaaaggtcctttaagtttttcgttttt 5227585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 284 - 334
Target Start/End: Original strand, 28159855 - 28159905
Alignment:
Q  284 ttataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    |||||| |||||||||| |||||||||||||||||||||||||||| ||||    
T  28159855 ttatagatcaaatgcatctaaaggtcctttaagtttttcgtttttcttaaa 28159905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 284 - 330
Target Start/End: Complemental strand, 36444743 - 36444697
Alignment:
Q  284 ttataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||    
T  36444743 ttataggtcaaatgcatctaaatgtcctttaagtttttcgtttttcc 36444697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 286 - 328
Target Start/End: Complemental strand, 39995493 - 39995451
Alignment:
Q  286 ataggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  39995493 ataggtcaaatgcatttaaaggtcttttaagtttttcgttttt 39995451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 282 - 328
Target Start/End: Complemental strand, 48552047 - 48552001
Alignment:
Q  282 ttttataggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||    
T  48552047 ttttataggtcaaatgcatctaaaggttctttaagtttttcgttttt 48552001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 288 - 334
Target Start/End: Complemental strand, 51371400 - 51371354
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||    
T  51371400 aggtcaaatgcatctaaaggtcctttaagtttttcgttttttctaaa 51371354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 328
Target Start/End: Original strand, 2055101 - 2055142
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  2055101 taggtcaaatgcatctaaaggtcctttaagtttttcgttttt 2055142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 328
Target Start/End: Complemental strand, 19496471 - 19496430
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  19496471 taggtcaaatgcatctaaaggtcctttaagtttttcgttttt 19496430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 328
Target Start/End: Original strand, 22298335 - 22298376
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  22298335 taggtcaaatgcatctaaaggtcctttaagtttttcgttttt 22298376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 334
Target Start/End: Complemental strand, 23553298 - 23553253
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||    
T  23553298 ggtcaaatgcatctaaaggtcctttaagtttttcgttttttctaaa 23553253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 25734546 - 25734505
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  25734546 ggtcaaatgcatctaaaggtcctttaagtttttcgtttttcc 25734505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 28812194 - 28812235
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  28812194 ggtcaaatgcatctaaaggtcctttaagtttttcgtttttcc 28812235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 328
Target Start/End: Complemental strand, 50276460 - 50276419
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  50276460 taggtcaaatgcatctaaaggtcctttaagtttttcgttttt 50276419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 288 - 328
Target Start/End: Original strand, 8881917 - 8881957
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  8881917 aggtcaaatgcatttaaaggtcctttaagtttttcattttt 8881957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 286 - 330
Target Start/End: Complemental strand, 28264880 - 28264836
Alignment:
Q  286 ataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||    
T  28264880 ataggtcaaatgcatctaaaggtcctttaagtttttcatttttcc 28264836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 288 - 328
Target Start/End: Original strand, 36444588 - 36444628
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  36444588 aggtcaaatgcatctaaaggtcctttaagtttttcgttttt 36444628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 329
Target Start/End: Original strand, 14564615 - 14564654
Alignment:
Q  290 gtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  14564615 gtcaaatgcatttaaatgtcctttaagtttttcgtttttc 14564654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 288 - 327
Target Start/End: Original strand, 17847003 - 17847042
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttt 327  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  17847003 aggtcaaatgcatctaaaggtcctttaagtttttcgtttt 17847042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 24458538 - 24458581
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttccta 332  Q
    |||||||||||| ||||||||||||||||||||| |||||||||    
T  24458538 ggtcaaatgcatctaaaggtcctttaagtttttcatttttccta 24458581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 329
Target Start/End: Original strand, 49118459 - 49118498
Alignment:
Q  290 gtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  49118459 gtcaaatgcatctaaaggtcctttaagtttttcgtttttc 49118498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 22298753 - 22298711
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||| |||| ||||||||||||||||||||||||    
T  22298753 aggtcaaatgcatctaaatgtcctttaagtttttcgtttttcc 22298711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 329
Target Start/End: Original strand, 35790787 - 35790829
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    ||||||||||||||||||| ||||||||| |||||||||||||    
T  35790787 taggtcaaatgcatttaaatgtcctttaaatttttcgtttttc 35790829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 328
Target Start/End: Original strand, 48551668 - 48551710
Alignment:
Q  286 ataggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  48551668 ataggtcaaatgcatctaaatgtcctttaagtttttcgttttt 48551710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 329
Target Start/End: Original strand, 44490027 - 44490068
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    ||||||||||||| ||||||| ||||||||||||||||||||    
T  44490027 aggtcaaatgcatctaaaggttctttaagtttttcgtttttc 44490068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 328
Target Start/End: Complemental strand, 48149735 - 48149694
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||| |||||||| |||||||||||||||||||||||||||    
T  48149735 taggtgaaatgcatctaaaggtcctttaagtttttcgttttt 48149694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 330
Target Start/End: Complemental strand, 17993339 - 17993299
Alignment:
Q  290 gtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||| |||||||||||||||||||| ||||||||    
T  17993339 gtcaaatgcatctaaaggtcctttaagttttttgtttttcc 17993299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 329
Target Start/End: Original strand, 24622995 - 24623035
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    |||||||||||| |||||||||||||||||||| |||||||    
T  24622995 ggtcaaatgcatctaaaggtcctttaagttttttgtttttc 24623035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 327
Target Start/End: Original strand, 27613280 - 27613316
Alignment:
Q  291 tcaaatgcatttaaaggtcctttaagtttttcgtttt 327  Q
    |||||||||| ||||||||||||||||||||||||||    
T  27613280 tcaaatgcatctaaaggtcctttaagtttttcgtttt 27613316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 335
Target Start/End: Complemental strand, 31208979 - 31208932
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaat 335  Q
    |||||||||||||| ||| ||||||||||||||||| ||||||||||||    
T  31208979 taggtcaaatgcatctaa-ggtcctttaagtttttcatttttcctaaat 31208932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 330
Target Start/End: Original strand, 32118529 - 32118573
Alignment:
Q  286 ataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||| ||| ||| |||||||||||||||||||||||||    
T  32118529 ataggtcaaatacatctaatggtcctttaagtttttcgtttttcc 32118573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 328
Target Start/End: Original strand, 33173926 - 33173966
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||||| ||||||||||||||||||||| |||||    
T  33173926 aggtcaaatgcatctaaaggtcctttaagtttttcattttt 33173966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 328
Target Start/End: Complemental strand, 33808105 - 33808065
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||||| ||||||| |||||||||||||||||||    
T  33808105 aggtcaaatgcatctaaaggttctttaagtttttcgttttt 33808065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 330
Target Start/End: Original strand, 37381657 - 37381705
Alignment:
Q  282 ttttataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||| ||||||||||  || |||||||||||||||||||||||||||||    
T  37381657 ttttttaggtcaaatttatctaaaggtcctttaagtttttcgtttttcc 37381705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 328
Target Start/End: Complemental strand, 42274041 - 42273997
Alignment:
Q  284 ttataggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||||||||  |||||||||||||||||||| |||||    
T  42274041 ttataggtcaaatgcatcaaaaggtcctttaagtttttcattttt 42273997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 328
Target Start/End: Complemental strand, 9339449 - 9339410
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||| ||||||||||||||||||||| |||||    
T  9339449 ggtcaaatgcatctaaaggtcctttaagtttttcattttt 9339410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 330
Target Start/End: Complemental strand, 12196705 - 12196662
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||| |||||||| ||||||||||||||||||||| |||||||    
T  12196705 taggtgaaatgcatctaaaggtcctttaagtttttcatttttcc 12196662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 330
Target Start/End: Complemental strand, 31591311 - 31591268
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||||| |||| |||||||||||||||| |||||||    
T  31591311 taggtcaaatgcatctaaaagtcctttaagtttttcatttttcc 31591268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 328
Target Start/End: Complemental strand, 33174314 - 33174275
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||  ||||||||||||||||||||||||||||||    
T  33174314 ggtcaaatatatttaaaggtcctttaagtttttcgttttt 33174275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 330
Target Start/End: Complemental strand, 33496450 - 33496407
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||| |||||||| ||||||||| |||||||||||||||||||    
T  33496450 taggttaaatgcatctaaaggtcccttaagtttttcgtttttcc 33496407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 328
Target Start/End: Complemental strand, 33693657 - 33693618
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||| |||| ||||||||||||||||||||||    
T  33693657 ggtcaaatgcatctaaatgtcctttaagtttttcgttttt 33693618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 291 - 338
Target Start/End: Original strand, 36834955 - 36835002
Alignment:
Q  291 tcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaatgat 338  Q
    |||||||||| ||||   ||||||||||||||||||||||||||||||    
T  36834955 tcaaatgcatctaaacaccctttaagtttttcgtttttcctaaatgat 36835002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 291 - 334
Target Start/End: Original strand, 41355202 - 41355245
Alignment:
Q  291 tcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    |||||||||| |||||||||||||| |||||| |||||||||||    
T  41355202 tcaaatgcatctaaaggtcctttaaatttttcatttttcctaaa 41355245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 328
Target Start/End: Complemental strand, 42549923 - 42549876
Alignment:
Q  281 tttttataggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||| |||||||||| ||| ||||||| |||||||||||||||||||    
T  42549923 tttttttaggtcaaatacatctaaaggttctttaagtttttcgttttt 42549876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 56555468 - 56555425
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagt-ttttcgtttttcc 330  Q
    ||||||||||||| |||||||||||||||| |||||||||||||    
T  56555468 aggtcaaatgcatctaaaggtcctttaagttttttcgtttttcc 56555425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 328
Target Start/End: Complemental strand, 10588813 - 10588775
Alignment:
Q  290 gtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||| |||||||||||||| ||||||||||||    
T  10588813 gtcaaatgcatctaaaggtcctttaaatttttcgttttt 10588775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 328
Target Start/End: Original strand, 30466910 - 30466948
Alignment:
Q  290 gtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||| |||||||| ||||||||||||||||||    
T  30466910 gtcaaatgcatctaaaggtcttttaagtttttcgttttt 30466948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 334
Target Start/End: Original strand, 33693235 - 33693285
Alignment:
Q  284 ttataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    |||||| |||||||||| ||||| | ||||| |||||||||||||||||||    
T  33693235 ttatagatcaaatgcatctaaagattctttacgtttttcgtttttcctaaa 33693285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 330
Target Start/End: Original strand, 33807687 - 33807729
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||| |||||||| |||||||||||| |||||||    
T  33807687 aggtcaaatgcatctaaaggtcatttaagtttttcatttttcc 33807729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 39995073 - 39995115
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaag-tttttcgtttttcc 330  Q
    |||||||||||| ||||||||||||||| ||||||||||||||    
T  39995073 ggtcaaatgcatctaaaggtcctttaagttttttcgtttttcc 39995115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 334
Target Start/End: Complemental strand, 40988868 - 40988818
Alignment:
Q  284 ttataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    |||| ||||||||| || |||| ||||||||||||||| ||||||||||||    
T  40988868 ttattggtcaaatgtatctaaaagtcctttaagttttttgtttttcctaaa 40988818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 329
Target Start/End: Complemental strand, 48708025 - 48707987
Alignment:
Q  291 tcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    |||||||||| ||||| ||||||||||||||||||||||    
T  48708025 tcaaatgcatctaaagatcctttaagtttttcgtttttc 48707987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 31973825 - 31973784
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||| |||| ||||||||| ||||||||||||||    
T  31973825 ggtcaaatgcatctaaatgtcctttaaatttttcgtttttcc 31973784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 329
Target Start/End: Original strand, 33452319 - 33452356
Alignment:
Q  292 caaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    ||||||||| ||||||||||| ||||||||||||||||    
T  33452319 caaatgcatctaaaggtccttaaagtttttcgtttttc 33452356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 320
Target Start/End: Original strand, 42273647 - 42273680
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttt 320  Q
    |||||||||||||| |||||||||||||||||||    
T  42273647 taggtcaaatgcatctaaaggtcctttaagtttt 42273680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 50276045 - 50276086
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||| |||| |||||||||||||||| |||||||    
T  50276045 ggtcaaatgcatctaaatgtcctttaagtttttcatttttcc 50276086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 328
Target Start/End: Complemental strand, 50542675 - 50542638
Alignment:
Q  291 tcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||| || |||||||||||||||||||||||||||    
T  50542675 tcaaatgtatctaaaggtcctttaagtttttcgttttt 50542638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 334
Target Start/End: Original strand, 4544890 - 4544937
Alignment:
Q  286 ataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    ||||||||||||||| ||||||| ||||||||||||| ||||| |||||    
T  4544890 ataggtcaaatgcatctaaaggt-ctttaagtttttcattttttctaaa 4544937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 321
Target Start/End: Original strand, 11795060 - 11795092
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagttttt 321  Q
    |||||||||||| ||||||||||||||||||||    
T  11795060 ggtcaaatgcatctaaaggtcctttaagttttt 11795092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 330
Target Start/End: Complemental strand, 11795476 - 11795436
Alignment:
Q  290 gtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||| ||| |||||| ||||||||||||||||||    
T  11795476 gtcaaatgcatctaagggtcctataagtttttcgtttttcc 11795436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 321
Target Start/End: Complemental strand, 20534433 - 20534397
Alignment:
Q  285 tataggtcaaatgcatttaaaggtcctttaagttttt 321  Q
    |||||||||||||||| |||||||| |||||||||||    
T  20534433 tataggtcaaatgcatctaaaggtcatttaagttttt 20534397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 328
Target Start/End: Complemental strand, 23135305 - 23135261
Alignment:
Q  284 ttataggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||||||||| |||| | |||||||||||||| |||||    
T  23135305 ttataggtcaaatgcatctaaatggcctttaagtttttcattttt 23135261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 334
Target Start/End: Original strand, 23552877 - 23552925
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaag-tttttcgtttttcctaaa 334  Q
    |||||||||||||| ||||| ||||| ||| ||||||||||||||||||    
T  23552877 taggtcaaatgcatctaaagatccttgaagttttttcgtttttcctaaa 23552925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 328
Target Start/End: Complemental strand, 24623363 - 24623323
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||||| | |||||| ||||||||||||||||||    
T  24623363 aggtcaaatgcatcttaaggtcttttaagtttttcgttttt 24623323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 328
Target Start/End: Complemental strand, 26017658 - 26017618
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||||| |||||||||||| |||||||| |||||    
T  26017658 aggtcaaatgcatctaaaggtcctttgagtttttcattttt 26017618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 334
Target Start/End: Original strand, 48149318 - 48149362
Alignment:
Q  290 gtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    ||||||| ||| ||||||||||||||||||||| ||||| |||||    
T  48149318 gtcaaatacatctaaaggtcctttaagtttttcattttttctaaa 48149362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 5e-16; HSPs: 80)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 286 - 329
Target Start/End: Complemental strand, 9962988 - 9962945
Alignment:
Q  286 ataggtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  9962988 ataggtcaaatgcatttaaaggtcctttaagtttttcgtttttc 9962945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 282 - 334
Target Start/End: Complemental strand, 45670787 - 45670735
Alignment:
Q  282 ttttataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||| |||||    
T  45670787 ttttataggacaaatgcatctaaaggtcctttaagtttttcgttttttctaaa 45670735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 287 - 330
Target Start/End: Complemental strand, 36158002 - 36157959
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  36158002 taggtcaaatgcatctaaaggtcctttaagtttttcgtttttcc 36157959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 291 - 330
Target Start/End: Original strand, 44978677 - 44978716
Alignment:
Q  291 tcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  44978677 tcaaatgcatttaaaggtcctttaagtttttcgtttttcc 44978716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 288 - 334
Target Start/End: Complemental strand, 7609090 - 7609044
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||    
T  7609090 aggtcaaatgtatttaaaggtcctttaagtttttcgttttttctaaa 7609044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 18917759 - 18917717
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  18917759 aggtcaaatgcatttaaaggttctttaagtttttcgtttttcc 18917717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 34971303 - 34971261
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  34971303 aggtcaaatgcatctaaaggtcctttaagtttttcgtttttcc 34971261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 46051685 - 46051643
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  46051685 aggtcaaatgcatctaaaggtcctttaagtttttcgtttttcc 46051643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 288 - 330
Target Start/End: Original strand, 49594868 - 49594910
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  49594868 aggtcaaatgcatctaaaggtcctttaagtttttcgtttttcc 49594910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 286 - 328
Target Start/End: Original strand, 50099035 - 50099077
Alignment:
Q  286 ataggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  50099035 ataggtcaaatacatttaaaggtcctttaagtttttcgttttt 50099077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 16508226 - 16508181
Alignment:
Q  285 tataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||    
T  16508226 tataggtcaaatgcatctaaaggtcctttaagtttttagtttttcc 16508181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 19274377 - 19274418
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  19274377 ggtcaaatgcatctaaaggtcctttaagtttttcgtttttcc 19274418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 41105834 - 41105875
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  41105834 ggtcaaatgcatctaaaggtcctttaagtttttcgtttttcc 41105875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 285 - 329
Target Start/End: Complemental strand, 38473953 - 38473909
Alignment:
Q  285 tataggtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    |||||||||||||||| |||| |||||||||||||||||||||||    
T  38473953 tataggtcaaatgcatctaaatgtcctttaagtttttcgtttttc 38473909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 291 - 334
Target Start/End: Original strand, 7651509 - 7651552
Alignment:
Q  291 tcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    |||||||||| ||||||||||||||||||||||||||| |||||    
T  7651509 tcaaatgcatctaaaggtcctttaagtttttcgttttttctaaa 7651552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 287 - 334
Target Start/End: Original strand, 12964462 - 12964509
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    ||||| |||||||||||||| |||||||||||||||||||||| ||||    
T  12964462 taggtgaaatgcatttaaagatcctttaagtttttcgtttttcttaaa 12964509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 328
Target Start/End: Original strand, 18781996 - 18782035
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  18781996 ggtcaaatgcatctaaaggtcctttaagtttttcgttttt 18782035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 328
Target Start/End: Complemental strand, 24204793 - 24204754
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  24204793 ggtcaaatgcatctaaaggtcctttaagtttttcgttttt 24204754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 287 - 330
Target Start/End: Original strand, 34969648 - 34969691
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||| ||| |||||||||||||||||||||||||||||    
T  34969648 taggtcaaatacatataaaggtcctttaagtttttcgtttttcc 34969691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 328
Target Start/End: Complemental strand, 37217138 - 37217091
Alignment:
Q  281 tttttataggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||| |||||||||||||| ||||||||||||||||||||| |||||    
T  37217138 tttttttaggtcaaatgcatctaaaggtcctttaagtttttcattttt 37217091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 287 - 334
Target Start/End: Complemental strand, 49095036 - 49094989
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    ||||||||||||||  |||||| |||||||||||||||||||||||||    
T  49095036 taggtcaaatgcatccaaaggttctttaagtttttcgtttttcctaaa 49094989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 328
Target Start/End: Complemental strand, 6711708 - 6711666
Alignment:
Q  286 ataggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||||||| ||||||||||||||||||||| |||||    
T  6711708 ataggtcaaatgcatctaaaggtcctttaagtttttcattttt 6711666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 330
Target Start/End: Original strand, 24204377 - 24204419
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||| ||||||||||||||||||||| |||||||    
T  24204377 aggtcaaatgcatctaaaggtcctttaagtttttcatttttcc 24204419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 328
Target Start/End: Original strand, 26549199 - 26549245
Alignment:
Q  282 ttttataggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||| |||||||||||||| |||||||||||||||||||| ||||||    
T  26549199 ttttttaggtcaaatgcatctaaaggtcctttaagttttttgttttt 26549245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 328
Target Start/End: Original strand, 28425263 - 28425309
Alignment:
Q  282 ttttataggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||| ||||||||||||| ||||||||||||||||||||| |||||    
T  28425263 ttttaaaggtcaaatgcatctaaaggtcctttaagtttttcattttt 28425309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 328
Target Start/End: Complemental strand, 33325964 - 33325922
Alignment:
Q  286 ataggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||| ||||||| |||||||||||||||||||||||||||    
T  33325964 ataggtcgaatgcatctaaaggtcctttaagtttttcgttttt 33325922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 328
Target Start/End: Original strand, 45670390 - 45670432
Alignment:
Q  286 ataggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||||||| ||||| |||||||||||||||||||||    
T  45670390 ataggtcaaatgcatctaaagatcctttaagtttttcgttttt 45670432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 329
Target Start/End: Original strand, 48802236 - 48802278
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    |||||||||||||| ||||||||||||||||||||| ||||||    
T  48802236 taggtcaaatgcatctaaaggtcctttaagtttttcatttttc 48802278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 7651896 - 7651855
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||| ||||||||||||||||||||| |||||||    
T  7651896 ggtcaaatgcatctaaaggtcctttaagtttttcatttttcc 7651855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 293 - 330
Target Start/End: Original strand, 12142916 - 12142953
Alignment:
Q  293 aaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||| |||||||||||||||||||||||||||||    
T  12142916 aaatgcatctaaaggtcctttaagtttttcgtttttcc 12142953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 293 - 334
Target Start/End: Complemental strand, 16706100 - 16706059
Alignment:
Q  293 aaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    |||||||| ||||||| |||||||||||||||||||||||||    
T  16706100 aaatgcatctaaaggttctttaagtttttcgtttttcctaaa 16706059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 328
Target Start/End: Complemental strand, 17990092 - 17990051
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||| |||| ||||||||||||||||||||||||||||||    
T  17990092 taggtctaatgtatttaaaggtcctttaagtttttcgttttt 17990051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 18782412 - 18782371
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||| |||| ||||||||||||||||||||||||    
T  18782412 ggtcaaatgcatctaaaagtcctttaagtttttcgtttttcc 18782371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 322
Target Start/End: Complemental strand, 19274796 - 19274759
Alignment:
Q  285 tataggtcaaatgcatttaaaggtcctttaagtttttc 322  Q
    |||||||||||||||| |||||||||||||||||||||    
T  19274796 tataggtcaaatgcatctaaaggtcctttaagtttttc 19274759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 21965299 - 21965258
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||| ||| |||||||||||||||||||||||||||||    
T  21965299 ggtcaaatacatctaaaggtcctttaagtttttcgtttttcc 21965258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 22351032 - 22351073
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||| |||||||||||||||||||| ||||||||    
T  22351032 ggtcaaatgcatctaaaggtcctttaagtttttagtttttcc 22351073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 25800461 - 25800502
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||| || |||||||||||||||||||||||||||||    
T  25800461 ggtcaaatgtatctaaaggtcctttaagtttttcgtttttcc 25800502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 281 - 330
Target Start/End: Original strand, 33673827 - 33673876
Alignment:
Q  281 tttttataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||| ||||||||||||| |||||||||||| ||||||| ||||||||    
T  33673827 tttttaaaggtcaaatgcatctaaaggtcctttgagttttttgtttttcc 33673876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 328
Target Start/End: Original strand, 36781077 - 36781118
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||||| |||||||| ||||||||||||||||||    
T  36781077 taggtcaaatgcatctaaaggtcttttaagtttttcgttttt 36781118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 52146840 - 52146881
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||| |||| ||||||||||||||||||||||||    
T  52146840 ggtcaaatgcatctaaatgtcctttaagtttttcgtttttcc 52146881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 293 - 330
Target Start/End: Complemental strand, 52147223 - 52147186
Alignment:
Q  293 aaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||| |||||||||||||||||||||||||||||    
T  52147223 aaatgcatctaaaggtcctttaagtttttcgtttttcc 52147186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 334
Target Start/End: Original strand, 5400690 - 5400734
Alignment:
Q  290 gtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    ||||||||||| |||||| | ||||||||||||||||||||||||    
T  5400690 gtcaaatgcatctaaaggacttttaagtttttcgtttttcctaaa 5400734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 328
Target Start/End: Original strand, 7552922 - 7552962
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||||||||||| |||||||||||||| |||||    
T  7552922 aggtcaaatgcatttaaagggcctttaagtttttcattttt 7552962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 328
Target Start/End: Original strand, 16705716 - 16705756
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||| |||||||| |||||||||||||||||||||||||||    
T  16705716 aggtgaaatgcatctaaaggtcctttaagtttttcgttttt 16705756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 329
Target Start/End: Original strand, 18917343 - 18917383
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  18917343 ggtcaaatgcatctaaagatcctttaagtttttcgtttttc 18917383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 328
Target Start/End: Complemental strand, 24036767 - 24036723
Alignment:
Q  284 ttataggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||||||||| |||| |||||||||||||||| |||||    
T  24036767 ttataggtcaaatgcatctaaaagtcctttaagtttttcattttt 24036723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 328
Target Start/End: Complemental strand, 25800876 - 25800836
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||||| ||||||||||||||||||||| |||||    
T  25800876 aggtcaaatgcatctaaaggtcctttaagtttttctttttt 25800836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 329
Target Start/End: Complemental strand, 26070130 - 26070086
Alignment:
Q  285 tataggtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    ||||||||||||| ||||||||||||||||| |||||| ||||||    
T  26070130 tataggtcaaatgtatttaaaggtcctttaaatttttcatttttc 26070086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 329
Target Start/End: Original strand, 37216714 - 37216754
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  37216714 ggtcaaatgcatctaaagttcctttaagtttttcgtttttc 37216754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 329
Target Start/End: Original strand, 46825351 - 46825387
Alignment:
Q  293 aaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    |||||||| ||||||||||||||||||||||||||||    
T  46825351 aaatgcatctaaaggtcctttaagtttttcgtttttc 46825387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 334
Target Start/End: Original strand, 49094619 - 49094663
Alignment:
Q  291 tcaaatgcatttaaaggtcctttaag-tttttcgtttttcctaaa 334  Q
    |||||||||||||||||||||||||| |||||| |||||||||||    
T  49094619 tcaaatgcatttaaaggtcctttaagttttttcatttttcctaaa 49094663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 328
Target Start/End: Original strand, 52067552 - 52067596
Alignment:
Q  284 ttataggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||||  || |||||||||||||||||||||||||||    
T  52067552 ttataggtcaaatatatctaaaggtcctttaagtttttcgttttt 52067596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 330
Target Start/End: Complemental strand, 52350246 - 52350206
Alignment:
Q  290 gtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||| |||||||||||||||||||| ||||||||    
T  52350246 gtcaaatgcatctaaaggtcctttaagttttttgtttttcc 52350206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 293 - 328
Target Start/End: Original strand, 18892180 - 18892215
Alignment:
Q  293 aaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||| |||||||||||||||||||||||||||    
T  18892180 aaatgcatctaaaggtcctttaagtttttcgttttt 18892215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 328
Target Start/End: Original strand, 21929340 - 21929379
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||| |||||||||||||| ||||||||||||    
T  21929340 ggtcaaatgcatctaaaggtcctttaaatttttcgttttt 21929379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 334
Target Start/End: Original strand, 30281476 - 30281523
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    ||||||||||| |||||||| |||||||||||||| ||||||| ||||    
T  30281476 taggtcaaatgtatttaaagatcctttaagttttttgtttttcttaaa 30281523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 330
Target Start/End: Original strand, 33194576 - 33194619
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||||| | ||| |||||||||||||||||||||||    
T  33194576 taggtcaaatgcatctgaagatcctttaagtttttcgtttttcc 33194619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 291 - 334
Target Start/End: Original strand, 43380672 - 43380715
Alignment:
Q  291 tcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    |||||||||| |||| ||| ||||||||||||||||||||||||    
T  43380672 tcaaatgcatctaaatgtcatttaagtttttcgtttttcctaaa 43380715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 328
Target Start/End: Original strand, 50533201 - 50533240
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||| |||||||||||||||||||||||| |||||    
T  50533201 ggtcaaatgtatttaaaggtcctttaagtttttcattttt 50533240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 328
Target Start/End: Complemental strand, 5401103 - 5401065
Alignment:
Q  290 gtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||| |||| ||||||||||||||||||||||    
T  5401103 gtcaaatgcatctaaaagtcctttaagtttttcgttttt 5401065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 321
Target Start/End: Complemental strand, 9879081 - 9879047
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagttttt 321  Q
    |||||||||||||||||||| ||||||||||||||    
T  9879081 taggtcaaatgcatttaaagatcctttaagttttt 9879047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 330
Target Start/End: Original strand, 16505139 - 16505185
Alignment:
Q  284 ttataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||| |||||||||||| ||||| |||||||||||||| ||||||||    
T  16505139 ttattggtcaaatgcatctaaagatcctttaagtttttagtttttcc 16505185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 328
Target Start/End: Original strand, 17983806 - 17983844
Alignment:
Q  290 gtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||| |||||||| ||||||||||||||||||    
T  17983806 gtcaaatgcatctaaaggtcttttaagtttttcgttttt 17983844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 329
Target Start/End: Complemental strand, 30281847 - 30281805
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    ||||||||||| || |||||||||||||| |||||||||||||    
T  30281847 taggtcaaatgtatctaaaggtcctttaaatttttcgtttttc 30281805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Complemental strand, 32373878 - 32373836
Alignment:
Q  286 ataggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||||||| ||||| |||||||||||||| ||||||    
T  32373878 ataggtcaaatgcatctaaagatcctttaagttttttgttttt 32373836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 46825766 - 46825724
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||| ||| ||||||||||||||||||||| |||||||    
T  46825766 aggtcaaatacatctaaaggtcctttaagtttttcctttttcc 46825724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 329
Target Start/End: Complemental strand, 49595267 - 49595225
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    |||||||||||||| |||| ||||||||||||||| |||||||    
T  49595267 taggtcaaatgcatctaaaagtcctttaagttttttgtttttc 49595225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 9878691 - 9878732
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||| |||  ||||||||||||||||||||||||    
T  9878691 ggtcaaatgcatctaactgtcctttaagtttttcgtttttcc 9878732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 9962613 - 9962658
Alignment:
Q  282 ttttataggtcaaatgcatttaaaggtcc-tttaagtttttcgttt 326  Q
    ||||||||||||||||||| |||| |||| ||||||||||||||||    
T  9962613 ttttataggtcaaatgcatctaaatgtccttttaagtttttcgttt 9962658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 12964866 - 12964825
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||| |||| |||||||||||||||| |||||||    
T  12964866 ggtcaaatgcatctaaaagtcctttaagtttttcatttttcc 12964825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 334
Target Start/End: Original strand, 23767322 - 23767367
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    ||||||||| || ||||| ||||||||||||||| |||||||||||    
T  23767322 ggtcaaatgtatctaaagatcctttaagtttttcatttttcctaaa 23767367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 328
Target Start/End: Complemental strand, 33194943 - 33194906
Alignment:
Q  291 tcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||| |||| ||||||||||||||||||||||    
T  33194943 tcaaatgcatctaaaagtcctttaagtttttcgttttt 33194906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 42510004 - 42509959
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaa 333  Q
    ||||||| |||||  |||||||||||||||||||||||||| ||||    
T  42510004 aggtcaactgcatccaaaggtcctttaagtttttcgttttttctaa 42509959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 329
Target Start/End: Complemental strand, 43396910 - 43396869
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    ||||||||||||| |||| |||||||||||||||| ||||||    
T  43396910 aggtcaaatgcatctaaaagtcctttaagtttttcatttttc 43396869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 328
Target Start/End: Original strand, 46051295 - 46051336
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||||| |||| ||||||||||||||| ||||||    
T  46051295 taggtcaaatgcatctaaatgtcctttaagttttttgttttt 46051336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 328
Target Start/End: Complemental strand, 46095396 - 46095359
Alignment:
Q  291 tcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||| |||||||||||||| ||||||||||||    
T  46095396 tcaaatgcatctaaaggtcctttaaatttttcgttttt 46095359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 328
Target Start/End: Complemental strand, 48669717 - 48669677
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||||| |||||||| ||||||||||||||||||    
T  48669717 taggtcaaatgcatctaaaggtc-tttaagtttttcgttttt 48669677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 328
Target Start/End: Complemental strand, 19315875 - 19315835
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||||| |||| |||||||||||||||| |||||    
T  19315875 aggtcaaatgcatctaaaagtcctttaagtttttcattttt 19315835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 334
Target Start/End: Complemental strand, 21929758 - 21929715
Alignment:
Q  290 gtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    ||||||||||| |||||||| |||||||||||||||||| |||||    
T  21929758 gtcaaatgcatctaaaggtc-tttaagtttttcgttttttctaaa 21929715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 330
Target Start/End: Complemental strand, 50690180 - 50690136
Alignment:
Q  286 ataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||| |||||||| |||||||| |||||||||||| |||||||    
T  50690180 ataggttaaatgcatctaaaggtcttttaagtttttcatttttcc 50690136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 69)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 288 - 334
Target Start/End: Complemental strand, 33003276 - 33003230
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||    
T  33003276 aggtcaaatgcatctaaaggtcctttaagtttttcgtttttcctaaa 33003230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 3352327 - 3352278
Alignment:
Q  286 ataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaat 335  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  3352327 ataggtcaaatgcatctaaaggtcctttaaatttttcgtttttcctaaat 3352278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 286 - 334
Target Start/End: Complemental strand, 27457490 - 27457442
Alignment:
Q  286 ataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  27457490 ataggtcaaatgcatttaaaggtccattaagtttttcgttttttctaaa 27457442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 285 - 328
Target Start/End: Original strand, 8689386 - 8689429
Alignment:
Q  285 tataggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  8689386 tataggtcaaatgcatttaaaggttctttaagtttttcgttttt 8689429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 287 - 330
Target Start/End: Complemental strand, 20408769 - 20408726
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  20408769 taggtcaaatgcatctaaaggtcctttaagtttttcgtttttcc 20408726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 11001052 - 11001010
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  11001052 aggtcaaatgcatctaaaggtcctttaagtttttcgtttttcc 11001010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 286 - 328
Target Start/End: Original strand, 11935292 - 11935334
Alignment:
Q  286 ataggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  11935292 ataggtcaaatgcatctaaaggtcctttaagtttttcgttttt 11935334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 286 - 328
Target Start/End: Complemental strand, 17002482 - 17002440
Alignment:
Q  286 ataggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  17002482 ataggtcaaatgcatctaaaggtcctttaagtttttcgttttt 17002440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 288 - 334
Target Start/End: Complemental strand, 20079581 - 20079535
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||    
T  20079581 aggtcaaatacatctaaaggtcctttaagtttttcgtttttcctaaa 20079535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 286 - 328
Target Start/End: Complemental strand, 35861531 - 35861489
Alignment:
Q  286 ataggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  35861531 ataggtcaaatgcatctaaaggtcctttaagtttttcgttttt 35861489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 328
Target Start/End: Complemental strand, 6600461 - 6600420
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  6600461 taggtcaaatgcatctaaaggtcctttaagtttttcgttttt 6600420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 285 - 334
Target Start/End: Original strand, 16751959 - 16752008
Alignment:
Q  285 tataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    |||||||||||||||| |||||||||||||| |||||||||||| |||||    
T  16751959 tataggtcaaatgcatctaaaggtcctttaaatttttcgttttttctaaa 16752008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 328
Target Start/End: Original strand, 26035271 - 26035312
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  26035271 taggtcaaatgcatctaaaggtcctttaagtttttcgttttt 26035312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 328
Target Start/End: Original strand, 27457102 - 27457143
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  27457102 taggtcaaatgcatttaaaggttctttaagtttttcgttttt 27457143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 33760797 - 33760752
Alignment:
Q  285 tataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||    
T  33760797 tataggtcaaatgcatctaaaagtcctttaagtttttcgtttttcc 33760752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 286 - 330
Target Start/End: Original strand, 8215715 - 8215759
Alignment:
Q  286 ataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||    
T  8215715 ataggtcaaatgcatctaaaggtcctttaagtttttcatttttcc 8215759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 288 - 328
Target Start/End: Complemental strand, 26593604 - 26593564
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  26593604 aggtcaaatgcatctaaaggtcctttaagtttttcgttttt 26593564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 290 - 334
Target Start/End: Original strand, 33760378 - 33760422
Alignment:
Q  290 gtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    |||||||||| |||||||||||||||||||||| |||||||||||    
T  33760378 gtcaaatgcacttaaaggtcctttaagtttttcatttttcctaaa 33760422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 287 - 330
Target Start/End: Original strand, 1827783 - 1827826
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||||||||||| ||||||||||||||| |||||||    
T  1827783 taggtcaaatgcatttaaagatcctttaagtttttcatttttcc 1827826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 287 - 330
Target Start/End: Complemental strand, 4016198 - 4016155
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||||| ||||||||||||||||| |||||||||||    
T  4016198 taggtcaaatgcatctaaaggtcctttaagttattcgtttttcc 4016155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 287 - 334
Target Start/End: Complemental strand, 23129238 - 23129191
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    ||||||||||| ||||| ||||| ||||||||||||||||||||||||    
T  23129238 taggtcaaatggatttataggtcatttaagtttttcgtttttcctaaa 23129191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 287 - 330
Target Start/End: Original strand, 38964019 - 38964062
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||||| ||||||||||||||||||||| |||||||    
T  38964019 taggtcaaatgcatctaaaggtcctttaagtttttcatttttcc 38964062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 6252207 - 6252165
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||| ||||||||||||||||||||| |||||||    
T  6252207 aggtcaaatgcatctaaaggtcctttaagtttttcatttttcc 6252165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 330
Target Start/End: Complemental strand, 8689810 - 8689764
Alignment:
Q  284 ttataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||| |||||||||| ||||||| |||||||||||||||||||||    
T  8689810 ttatagatcaaatgcatctaaaggttctttaagtttttcgtttttcc 8689764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 9919840 - 9919798
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||||  ||||||||||||||||||||||||||||    
T  9919840 aggtcaaatgcatccaaaggtcctttaagtttttcgtttttcc 9919798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 14717418 - 14717464
Alignment:
Q  285 tataggtcaaatgcatttaaaggtcctttaag-tttttcgtttttcc 330  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||    
T  14717418 tataggtcaaatgcatctaaaggtcctttaagttttttcgtttttcc 14717464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 19661955 - 19661913
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||| |||||||| ||||||||||||||||||||    
T  19661955 aggtcaaatgcatctaaaggtcgtttaagtttttcgtttttcc 19661913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 330
Target Start/End: Original strand, 30863095 - 30863141
Alignment:
Q  284 ttataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||| |||||||||||| |||||||| ||||||||||||||||||||    
T  30863095 ttattggtcaaatgcatctaaaggtcttttaagtttttcgtttttcc 30863141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 330
Target Start/End: Original strand, 39125942 - 39125984
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  39125942 aggtcaaatgcatctaaagatcctttaagtttttcgtttttcc 39125984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 328
Target Start/End: Original strand, 39401895 - 39401937
Alignment:
Q  286 ataggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||| |||||||||||||||||||||||| |||||    
T  39401895 ataggtcaaatggatttaaaggtcctttaagtttttcattttt 39401937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 328
Target Start/End: Complemental strand, 445170 - 445129
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||||| ||||| |||||||||||||||||||||    
T  445170 taggtcaaatgcatctaaagttcctttaagtttttcgttttt 445129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 281 - 330
Target Start/End: Original strand, 9919181 - 9919230
Alignment:
Q  281 tttttataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||| ||||||||||||||  ||||||||||||| ||||||||||||||    
T  9919181 tttttttaggtcaaatgcatccaaaggtcctttaaatttttcgtttttcc 9919230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 11000635 - 11000676
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||| | |||||||||||||||||||||||||||    
T  11000635 ggtcaaatgcatcttaaggtcctttaagtttttcgtttttcc 11000676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 334
Target Start/End: Original strand, 27116002 - 27116051
Alignment:
Q  285 tataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    ||||||||||||| || ||||||| ||||||||||||||||||| |||||    
T  27116002 tataggtcaaatgtatctaaaggttctttaagtttttcgttttttctaaa 27116051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 329
Target Start/End: Original strand, 35341997 - 35342038
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    |||||||||||||||||| || ||||||||||||||||||||    
T  35341997 aggtcaaatgcatttaaatgttctttaagtttttcgtttttc 35342038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 35342414 - 35342373
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||| ||||||||||||||||||||| |||||||    
T  35342414 ggtcaaatgcatctaaaggtcctttaagtttttcatttttcc 35342373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 41282576 - 41282535
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||| ||||||||||||||||||||| |||||||    
T  41282576 ggtcaaatgcatctaaaggtcctttaagtttttcatttttcc 41282535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 293 - 330
Target Start/End: Complemental strand, 42263145 - 42263108
Alignment:
Q  293 aaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||| |||||||||||||||||||||||||||||    
T  42263145 aaatgcatctaaaggtcctttaagtttttcgtttttcc 42263108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 328
Target Start/End: Complemental strand, 8216135 - 8216095
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||||||||||||||||||| |||||| |||||    
T  8216135 aggtcaaatgcatttaaaggtcctttaaatttttcattttt 8216095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 330
Target Start/End: Complemental strand, 27116420 - 27116376
Alignment:
Q  286 ataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||||| |||| ||||||||||||||| ||||||||    
T  27116420 ataggtcaaatgcatctaaaagtcctttaagttttttgtttttcc 27116376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 328
Target Start/End: Complemental strand, 28078729 - 28078689
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||||| |||| ||||||||||||||||||||||    
T  28078729 aggtcaaatgcatctaaaagtcctttaagtttttcgttttt 28078689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 328
Target Start/End: Original strand, 31710099 - 31710139
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||| ||| |||||||||||||||||||||||||||    
T  31710099 aggtcaaatacatctaaaggtcctttaagtttttcgttttt 31710139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 330
Target Start/End: Original strand, 41282153 - 41282201
Alignment:
Q  282 ttttataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||| ||||||||||||| |||| ||||||||||||||| ||||||||    
T  41282153 ttttaaaggtcaaatgcatctaaacgtcctttaagttttttgtttttcc 41282201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 329
Target Start/End: Complemental strand, 1052770 - 1052727
Alignment:
Q  286 ataggtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    |||||||||||| ||||||||||||| |||||||||| ||||||    
T  1052770 ataggtcaaatgtatttaaaggtcctctaagtttttcatttttc 1052727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 329
Target Start/End: Original strand, 3351910 - 3351949
Alignment:
Q  290 gtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    ||||||||||| ||||||||||||||||||||| ||||||    
T  3351910 gtcaaatgcatctaaaggtcctttaagtttttcatttttc 3351949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 328
Target Start/End: Original strand, 14620727 - 14620766
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||||| ||| ||||||||||||||||||||||    
T  14620727 ggtcaaatgcattcaaatgtcctttaagtttttcgttttt 14620766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 330
Target Start/End: Original strand, 16095865 - 16095908
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||||| |||| |||||||||||||||| |||||||    
T  16095865 taggtcaaatgcatctaaaagtcctttaagtttttcatttttcc 16095908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 328
Target Start/End: Complemental strand, 16752330 - 16752291
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||| |||||| ||||||||||||||||||||    
T  16752330 ggtcaaatgcatctaaaggccctttaagtttttcgttttt 16752291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 328
Target Start/End: Original strand, 35155069 - 35155108
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||| ||| |||||||||||||||||||||||||||    
T  35155069 ggtcaaatacatctaaaggtcctttaagtttttcgttttt 35155108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 329
Target Start/End: Complemental strand, 35155465 - 35155426
Alignment:
Q  290 gtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  35155465 gtcaaatgcatttaaaggttctttaagttttttgtttttc 35155426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 330
Target Start/End: Original strand, 6251810 - 6251852
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||||  |||||||||||||||||||| |||||||    
T  6251810 aggtcaaatgcatccaaaggtcctttaagtttttcatttttcc 6251852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 327
Target Start/End: Original strand, 6331192 - 6331234
Alignment:
Q  285 tataggtcaaatgcatttaaaggtcctttaagtttttcgtttt 327  Q
    |||||||||||||||| |||| |||||||||||||||| ||||    
T  6331192 tataggtcaaatgcatctaaatgtcctttaagtttttcatttt 6331234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 330
Target Start/End: Original strand, 6600042 - 6600084
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||| |||| || |||||||||||||||||||||    
T  6600042 aggtcaaatgcatctaaacgttctttaagtttttcgtttttcc 6600084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 330
Target Start/End: Original strand, 19659407 - 19659449
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||| ||||||||||||||||||||  |||||||    
T  19659407 aggtcaaatgcatctaaaggtcctttaagttttttatttttcc 19659449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 20408350 - 20408392
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaag-tttttcgtttttcc 330  Q
    |||||||||||| ||||||||||||||| ||||||||||||||    
T  20408350 ggtcaaatgcatctaaaggtcctttaagttttttcgtttttcc 20408392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 334
Target Start/End: Original strand, 39824373 - 39824419
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    |||||||||| || ||||||||||||||||||| ||||||| |||||    
T  39824373 aggtcaaatgtatctaaaggtcctttaagttttgcgttttttctaaa 39824419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Original strand, 42993333 - 42993375
Alignment:
Q  286 ataggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||||||| ||||||||| |||| ||||||||||||    
T  42993333 ataggtcaaatgcatctaaaggtcccttaaatttttcgttttt 42993375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 328
Target Start/End: Complemental strand, 14717842 - 14717801
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||||| |||| |||||||||||||||| |||||    
T  14717842 taggtcaaatgcatctaaaagtcctttaagtttttcattttt 14717801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 328
Target Start/End: Original strand, 28078310 - 28078351
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||||| |||||||| ||||||||||| ||||||    
T  28078310 taggtcaaatgcatctaaaggtcttttaagttttttgttttt 28078351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 328
Target Start/End: Complemental strand, 30298074 - 30298033
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||||| |||| ||| ||||||||||||||||||    
T  30298074 taggtcaaatgcatctaaaagtcatttaagtttttcgttttt 30298033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 330
Target Start/End: Complemental strand, 31710524 - 31710475
Alignment:
Q  281 tttttataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||| ||| |||||||||| ||||| |||||||||||||| ||||||||    
T  31710524 tttttttagatcaaatgcatctaaagatcctttaagtttttagtttttcc 31710475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 43166583 - 43166542
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||| || |||||||| ||||||||||||||||||||    
T  43166583 ggtcaaatgtatctaaaggtcttttaagtttttcgtttttcc 43166542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 328
Target Start/End: Complemental strand, 6333011 - 6332971
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||||| |||| |||||||||||||||| |||||    
T  6333011 aggtcaaatgcatctaaatgtcctttaagtttttcattttt 6332971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 330
Target Start/End: Original strand, 8694681 - 8694725
Alignment:
Q  286 ataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||||||||||| || |||||||||| | |||||||    
T  8694681 ataggtcaaatgcatttaaagttcttttaagttttgcatttttcc 8694725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 329
Target Start/End: Complemental strand, 8695099 - 8695060
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  8695099 ggtcaaatgcatataaaggtc-tttaagtttttcgtttttc 8695060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 330
Target Start/End: Complemental strand, 11935686 - 11935638
Alignment:
Q  282 ttttataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||| ||| ||||||| || ||||||||||||||||||||| |||||||    
T  11935686 ttttttagatcaaatgtatctaaaggtcctttaagtttttcatttttcc 11935638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 330
Target Start/End: Complemental strand, 30208718 - 30208679
Alignment:
Q  290 gtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||| |||||||| ||||||||||||||||||||    
T  30208718 gtcaaatgcatctaaaggtc-tttaagtttttcgtttttcc 30208679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 328
Target Start/End: Complemental strand, 30863486 - 30863447
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||| ||||||||||||||||| ||||||||||||||||||    
T  30863486 aggttaaatgcatttaaaggtc-tttaagtttttcgttttt 30863447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 329
Target Start/End: Original strand, 33002875 - 33002919
Alignment:
Q  285 tataggtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    |||| ||||||||||| ||||| |||||||||||||| |||||||    
T  33002875 tatatgtcaaatgcatctaaagatcctttaagttttttgtttttc 33002919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 284 - 329
Target Start/End: Original strand, 14491 - 14536
Alignment:
Q  284 ttataggtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  14491 ttataggtcaaatgcatctaaaggtcctttaagtttttcgtttttc 14536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 288 - 328
Target Start/End: Original strand, 17942855 - 17942895
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  17942855 aggtcaaatgcatttaaaggtcctttaagtttttcgttttt 17942895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 285 - 328
Target Start/End: Complemental strand, 17428570 - 17428527
Alignment:
Q  285 tataggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  17428570 tataggtcaaatgcatttaaaggtcttttaagtttttcgttttt 17428527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 288 - 334
Target Start/End: Complemental strand, 1077472 - 1077426
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||    
T  1077472 aggtcaaatgcgtctaaaggtcctttaagtttttcgtttttcctaaa 1077426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 26393333 - 26393291
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  26393333 aggtcaaatgcatctaaaggtcctttaagtttttcgtttttcc 26393291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 288 - 334
Target Start/End: Original strand, 29050089 - 29050135
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||    
T  29050089 aggtcaaatgcatctaaaagtcctttaagtttttcgtttttcctaaa 29050135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 328
Target Start/End: Original strand, 3258712 - 3258753
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  3258712 taggtcaaatgcatataaaggtcctttaagtttttcgttttt 3258753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 328
Target Start/End: Complemental strand, 3259140 - 3259091
Alignment:
Q  279 tgtttttataggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||| |||  |||||||||||||||||||||||||||||||||||||    
T  3259140 tgtttttctagtacaaatgcatttaaaggtcctttaagtttttcgttttt 3259091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 30457547 - 30457506
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  30457547 ggtcaaatgcatctaaaggtcctttaagtttttcgtttttcc 30457506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 290 - 330
Target Start/End: Original strand, 30378836 - 30378876
Alignment:
Q  290 gtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  30378836 gtcaaatgcatctaaaggtcctttaagtttttcgtttttcc 30378876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 286 - 330
Target Start/End: Complemental strand, 30379254 - 30379210
Alignment:
Q  286 ataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||| || |||||||||||||||||||||||||||||    
T  30379254 ataggtcaaatgtatctaaaggtcctttaagtttttcgtttttcc 30379210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 286 - 330
Target Start/End: Complemental strand, 35224217 - 35224173
Alignment:
Q  286 ataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||    
T  35224217 ataggtcaaatgcatctaaaagtcctttaagtttttcgtttttcc 35224173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 287 - 330
Target Start/End: Original strand, 2598005 - 2598048
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||||| ||||||||||||||||||||| |||||||    
T  2598005 taggtcaaatgcatctaaaggtcctttaagtttttcatttttcc 2598048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 328
Target Start/End: Original strand, 2643932 - 2643971
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  2643932 ggtcaaatgcatctaaaggtcctttaagtttttcgttttt 2643971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 328
Target Start/End: Original strand, 2707306 - 2707345
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  2707306 ggtcaaatgcatataaaggtcctttaagtttttcgttttt 2707345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 330
Target Start/End: Original strand, 3408035 - 3408077
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||| |||| ||||||||||||||||||||||||    
T  3408035 aggtcaaatgcatctaaaagtcctttaagtttttcgtttttcc 3408077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 326
Target Start/End: Complemental strand, 12626871 - 12626833
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgttt 326  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  12626871 aggtcaaatgcatctaaaggtcctttaagtttttcgttt 12626833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 334
Target Start/End: Original strand, 17428174 - 17428224
Alignment:
Q  284 ttataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    ||||||||||||||||| ||||| | ||||||||||||||||||| |||||    
T  17428174 ttataggtcaaatgcatctaaagattctttaagtttttcgttttttctaaa 17428224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 334
Target Start/End: Original strand, 26936453 - 26936499
Alignment:
Q  289 ggtcaaatgcatttaaaggtccttt-aagtttttcgtttttcctaaa 334  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||    
T  26936453 ggtcaaatgcatttaaaggtcctttaaattttttcgtttttcctaaa 26936499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 330
Target Start/End: Complemental strand, 29050515 - 29050465
Alignment:
Q  281 tttttataggtcaaatgcatttaaaggtcc-tttaagtttttcgtttttcc 330  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||||||||    
T  29050515 tttttattggtcaaatgcatctaaaggtccttttaagtttttcgtttttcc 29050465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 2707693 - 2707652
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||| ||||||||||||||||||||| |||||||    
T  2707693 ggtcaaatgcatctaaaggtcctttaagtttttcatttttcc 2707652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 328
Target Start/End: Complemental strand, 6503954 - 6503913
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||||||||||||||||| ||||||||| |||||    
T  6503954 taggtcaaatgcatttaaaggtccttcaagtttttcattttt 6503913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 328
Target Start/End: Original strand, 6785006 - 6785047
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||||| ||||||| |||||||||||||||||||    
T  6785006 taggtcaaatgcatctaaaggttctttaagtttttcgttttt 6785047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 9382753 - 9382712
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||| |||||||||||||||||||| ||||||||    
T  9382753 ggtcaaatgcatctaaaggtcctttaagttttttgtttttcc 9382712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 12613148 - 12613103
Alignment:
Q  285 tataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||||||| ||||||| ||||||||||||| |||||||    
T  12613148 tataggtcaaatgcatctaaaggttctttaagtttttcatttttcc 12613103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 17943270 - 17943229
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||| |||||||||||||||||||| ||||||||    
T  17943270 ggtcaaatgcatctaaaggtcctttaagttttttgtttttcc 17943229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 329
Target Start/End: Complemental strand, 8178565 - 8178525
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    |||||||||||| |||||||||||||||||||| |||||||    
T  8178565 ggtcaaatgcatctaaaggtcctttaagttttttgtttttc 8178525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 326
Target Start/End: Original strand, 2390110 - 2390149
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgttt 326  Q
    |||||||||||||| |||||||| ||||||||||||||||    
T  2390110 taggtcaaatgcatctaaaggtcttttaagtttttcgttt 2390149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 330
Target Start/End: Original strand, 1915250 - 1915291
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||||| |||||||||||||||||||| |||||||    
T  1915250 aggtcaaatgcatt-aaaggtcctttaagtttttcatttttcc 1915291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Complemental strand, 6785424 - 6785382
Alignment:
Q  286 ataggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||| ||| |||||||||||||||||||| ||||||    
T  6785424 ataggtcaaatacatctaaaggtcctttaagtttttagttttt 6785382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 329
Target Start/End: Original strand, 26392914 - 26392956
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    ||||||||||| || ||||||||||||||||||||| ||||||    
T  26392914 taggtcaaatgtatctaaaggtcctttaagtttttcatttttc 26392956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 329
Target Start/End: Complemental strand, 3408424 - 3408383
Alignment:
Q  289 ggtcaaatgcatttaaaggtcc-tttaagtttttcgtttttc 329  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  3408424 ggtcaaatgcatttaaaggtccttttaagttttttgtttttc 3408383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 329
Target Start/End: Original strand, 8178155 - 8178196
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    |||||||||||||  |||||||||||||||||||| ||||||    
T  8178155 aggtcaaatgcatccaaaggtcctttaagtttttcatttttc 8178196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 328
Target Start/End: Original strand, 9382362 - 9382403
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||  || |||||||||||||||||||||||||||    
T  9382362 taggtcaaatatatctaaaggtcctttaagtttttcgttttt 9382403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 334
Target Start/End: Original strand, 12612759 - 12612800
Alignment:
Q  293 aaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    |||||||| |||||||||||||||||||| |||||| |||||    
T  12612759 aaatgcatctaaaggtcctttaagttttttgttttttctaaa 12612800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 17514934 - 17514975
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||| ||||| | |||||||||||||||||||||    
T  17514934 ggtcaaatgcatctaaagatactttaagtttttcgtttttcc 17514975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 332
Target Start/End: Complemental strand, 26936823 - 26936778
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagt-ttttcgtttttccta 332  Q
    ||||||| ||||| |||||||||||||||| |||||||||||||||    
T  26936823 aggtcaactgcatctaaaggtcctttaagttttttcgtttttccta 26936778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 328
Target Start/End: Original strand, 10256054 - 10256094
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||||| |||| |||| |||||||||||||||||    
T  10256054 aggtcaaatgcatctaaatgtcccttaagtttttcgttttt 10256094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 328
Target Start/End: Original strand, 26230839 - 26230879
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    ||||||||||||| |||| ||| ||||||||||||||||||    
T  26230839 aggtcaaatgcatctaaaagtcgtttaagtttttcgttttt 26230879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 334
Target Start/End: Complemental strand, 5419 - 5374
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||    
T  5419 ggtcaaatgcatctaaaggtcctttaagtttttcgttttttctaaa 5374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 334
Target Start/End: Original strand, 4998 - 5046
Alignment:
Q  287 taggtcaaatgcatttaaaggtcctttaag-tttttcgtttttcctaaa 334  Q
    |||||||||||||| ||||| ||||| ||| ||||||||||||||||||    
T  4998 taggtcaaatgcatctaaagatccttgaagttttttcgtttttcctaaa 5046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 329
Target Start/End: Complemental strand, 252760 - 252721
Alignment:
Q  290 gtcaaatgcatttaaaggtcctttaagtttttcgtttttc 329  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  252760 gtcaaatgcatttaaatgtcctttaagtttttcgtttttc 252721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 2084 - 2039
Alignment:
Q  285 tataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||||||  ||||||||||||| ||||||||||||||    
T  2084 tataggtcaaatgcatcaaaaggtcctttaaatttttcgtttttcc 2039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 5834 - 5793
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    |||||||||||| |||||||||||||||||||| ||||||||    
T  5834 ggtcaaatgcatctaaaggtcctttaagtttttagtttttcc 5793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 334
Target Start/End: Complemental strand, 219124 - 219075
Alignment:
Q  285 tataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaa 334  Q
    ||||| |||||||||| ||||||||||||||||||||| |||||| ||||    
T  219124 tatagatcaaatgcatctaaaggtcctttaagtttttcatttttcttaaa 219075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 330
Target Start/End: Original strand, 218669 - 218714
Alignment:
Q  284 ttataggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||||||| ||||||| |||||||||||| ||||||||    
T  218669 ttataggtcaaatgcatctaaaggt-ctttaagttttttgtttttcc 218714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 328
Target Start/End: Original strand, 47776 - 47819
Alignment:
Q  285 tataggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||||||| |||||| | ||||||||||||||||||    
T  47776 tataggtcaaatgcatctaaaggacttttaagtttttcgttttt 47819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 328
Target Start/End: Complemental strand, 101324 - 101285
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||| |||||||| ||||||||||||||||||    
T  101324 ggtcaaatgcatctaaaggtcatttaagtttttcgttttt 101285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0693 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0693
Description:

Target: scaffold0693; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 327
Target Start/End: Original strand, 4935 - 4973
Alignment:
Q  289 ggtcaaatgcatttaaaggtcctttaagtttttcgtttt 327  Q
    |||||||||||| |||| |||||||||||||||||||||    
T  4935 ggtcaaatgcatctaaaagtcctttaagtttttcgtttt 4973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 330
Target Start/End: Original strand, 11182 - 11224
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcc 330  Q
    ||||||||||||| |||| ||| ||||||||||||||||||||    
T  11182 aggtcaaatgcatctaaaagtcttttaagtttttcgtttttcc 11224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1986 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1986
Description:

Target: scaffold1986; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 321
Target Start/End: Complemental strand, 321 - 288
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagttttt 321  Q
    ||||||||||||| ||||||||||||||||||||    
T  321 aggtcaaatgcatctaaaggtcctttaagttttt 288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0416 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0416
Description:

Target: scaffold0416; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 328
Target Start/End: Original strand, 6589 - 6629
Alignment:
Q  288 aggtcaaatgcatttaaaggtcctttaagtttttcgttttt 328  Q
    |||||||||||||  ||| ||||||||||||||||||||||    
T  6589 aggtcaaatgcatccaaatgtcctttaagtttttcgttttt 6629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University