View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14723_low_33 (Length: 233)
Name: NF14723_low_33
Description: NF14723
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14723_low_33 |
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Alignment Details
Target: chr3 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 7 - 222
Target Start/End: Original strand, 38828109 - 38828324
Alignment:
| Q |
7 |
gcacccatatctcaatcccttcccgatcagcttaaaactctgtatggcaagcagcacgttcaatagttttggttaaggagggtgagtggagtaaatgagg |
106 |
Q |
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| T |
38828109 |
gcacccatatctcaatcccttcccgatcagcttaaaactctgtatggcaagcagcacgttcaatagttttggttaaggagggtgagtggagtaaatgagg |
38828208 |
T |
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| Q |
107 |
tagcataaggaaacagtaatgataatttttctcatttaaataacatatagagaagagttataattagaaaaaagttaaannnnnnngttgctagagtggt |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
38828209 |
tagcataaggaaacagtaatgataatttttctcatttaaataacatatagagaagagttataattagaaaaaagttaattttttttgttgctagagtggt |
38828308 |
T |
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| Q |
207 |
tctagccactgattat |
222 |
Q |
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|||||||||||||||| |
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| T |
38828309 |
tctagccactgattat |
38828324 |
T |
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