View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14723_low_37 (Length: 205)
Name: NF14723_low_37
Description: NF14723
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14723_low_37 |
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Alignment Details
Target: chr2 (Bit Score: 151; Significance: 4e-80; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 21 - 183
Target Start/End: Complemental strand, 13793323 - 13793161
Alignment:
| Q |
21 |
tacagtgacattacaatggaaaatgttaagaatcctatcatcattgaccaagagtatgaatgctctccaaattgcaaaaagaaggtttgtgtgttcatat |
120 |
Q |
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| T |
13793323 |
tacagtgacattacaatggaaaatgttaagaatcctatcatcattgaccaagagtatgaatgctctccaaattgcaaaaagaaggtttgtgtgttcatat |
13793224 |
T |
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| Q |
121 |
ttctctttatttttaattcattattacaatatgtgataaaacatttaattagatcaacaacct |
183 |
Q |
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| T |
13793223 |
ttctctttatttttaattcattattacaatatgtgctaaaacatttaattcgatcaaccacct |
13793161 |
T |
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