View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14724_high_5 (Length: 247)
Name: NF14724_high_5
Description: NF14724
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14724_high_5 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 46145597 - 46145351
Alignment:
| Q |
1 |
gcagtccaacaatttgaaaatactaagtgacaatgataggcgcaaaatgagatgatattttagtgtctgcttgttgaaatttaaaatacatctcttatgt |
100 |
Q |
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| T |
46145597 |
gcagtccaacaatttgaaaatactaagtgacaatgataggcgcaaaatgagatgatattttagtgtctgcttgttgaaatttaaaatacatctcttatgt |
46145498 |
T |
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| Q |
101 |
ttgagagaaactaagataaaaaatttagtatatttgtaggtatcttgttggccttgatcatctttattatatttaattaaatttctagttgtttgtatgg |
200 |
Q |
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| T |
46145497 |
ttgagagaaactaagataaaaaatttagtatatttgtaggtatcttgttggccttgatcatctttattatatttaattaaatttctagttgtttgtatgg |
46145398 |
T |
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| Q |
201 |
ccgtatgagactatgactcataccaaatgtcaaggttatataattca |
247 |
Q |
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| T |
46145397 |
ccgtatgagactatgactcataccaaatgtcaaggttatataattca |
46145351 |
T |
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