View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14725_low_2 (Length: 399)
Name: NF14725_low_2
Description: NF14725
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14725_low_2 |
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Alignment Details
Target: chr5 (Bit Score: 301; Significance: 1e-169; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 12 - 383
Target Start/End: Original strand, 36528718 - 36529090
Alignment:
| Q |
12 |
agcagagaccaagtagtagtaattggagattatcaaatagattgtgtttgtttgactaaaaagttgagaaagaaattttgttatgttaatcttcttagtg |
111 |
Q |
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| T |
36528718 |
agcagagaccaagtagtagtaattggagattatcaaatagactgtgtttgtttgactaaaaagttgagaaagaaattttgttatgttaatcttttaagtg |
36528817 |
T |
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| Q |
112 |
ttgaagatgcaaacgtttctgctagtaatgaaggtggtgaagctaaagaggaagaaaaagatgttaaagtaactataaattcaacagaaaatttatcggt |
211 |
Q |
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| T |
36528818 |
ttgaagatgcaaacgtttctgctagttatgaaggtgatgaagctaaagaggaagaaaaagatgttgaagtaaccataaattcaacagaaaattcatcggt |
36528917 |
T |
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| Q |
212 |
tgtttgtaattgtgagaaaaattatcctccaccttgtcccttgtattacatagttgatcatgaaccataccctagtagttgttctatccaatgaaaatat |
311 |
Q |
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| T |
36528918 |
tgtttgtaattgtgagaaaaattatcctccaccttgtcccttgtattacatagttgatcatgagccataccctagtagttgctctatccaatgaaaatat |
36529017 |
T |
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| Q |
312 |
aatgtgtcactatgataaatatttcaatgtttaaatttcaataatttaag-ttcttaatttgatatggttttt |
383 |
Q |
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||||||| |||||||| || |||| ||||||||||||| || |||||||| |||||||||||||||||||||| |
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| T |
36529018 |
aatgtgttactatgatcaacattttaatgtttaaatttaaagaatttaagtttcttaatttgatatggttttt |
36529090 |
T |
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