View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14726_high_11 (Length: 405)
Name: NF14726_high_11
Description: NF14726
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14726_high_11 |
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Alignment Details
Target: chr8 (Bit Score: 352; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 352; E-Value: 0
Query Start/End: Original strand, 17 - 395
Target Start/End: Complemental strand, 36291323 - 36290944
Alignment:
| Q |
17 |
acctttcaatt-ctcaaacattgaagacccttctagtaagtaactgccaaattgtaactccaattcccctgtaaacctcaactaaactccattagctaca |
115 |
Q |
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||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
36291323 |
acctttcaattgctcaaacattgaagaccctcctagtaagtaactgccaaattgtaactccaattcccctgtaaacctcaactaaactccattaactaca |
36291224 |
T |
|
| Q |
116 |
agataccaatcgaccctctttcccttcatttcattttccccttaattaggcactctataaatatgcatttcagctaaacctctattcattcattcatctt |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36291223 |
agataccaatcgaccctctttcccttcatttcattttccccttaattaggcactctataaatatgcatttcagctaaacctctattcattcattcatctt |
36291124 |
T |
|
| Q |
216 |
ataaacctcacaaaaggctttttgtattcactttcttctatcattgtcataacttgtgctgtgtcctcaaaatggttgtgacttcaaagagaaccactac |
315 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36291123 |
ataaacctcacaaaaggctttttgtattcactttcttctatcattgtcataacttgtgctgtgtcctcaaaatggttgtgacttcaaagagaaccactac |
36291024 |
T |
|
| Q |
316 |
aaaatcatctgttagtgctaaccaacgtgatgattcatcactttcattagtccatgttgagcaagctctacccatctctg |
395 |
Q |
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|||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
36291023 |
aaaatcttctgttagtgctaaccaacgtgatgaatcatcactttcattagtccatgttgagcaagctctacccatttctg |
36290944 |
T |
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