View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14726_low_17 (Length: 328)
Name: NF14726_low_17
Description: NF14726
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14726_low_17 |
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Alignment Details
Target: chr3 (Bit Score: 263; Significance: 1e-146; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 1 - 306
Target Start/End: Original strand, 51522546 - 51522849
Alignment:
| Q |
1 |
tcaatagaaactcacacttctctgattctttgaattttccttgtttatttatttattttgaaaatccatgatttatgtaattgattctcgctgcatggtt |
100 |
Q |
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||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
51522546 |
tcaatagaaactctcacttttccgattctttgaattttccttgtttatttatttattttgaaagtccatgatttatgtaattgattctcgctgcatggtt |
51522645 |
T |
|
| Q |
101 |
tgcgatgtcatctgcaatttttgttgtcatgcacacatcctttctccttgcttctcatggaatcaattcatttgaaaacccaaaccttctctggaatcaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |
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| T |
51522646 |
tgcgatgtcatctgcaatttttgttgtcatgcacacatcctttctccttgcttctcatggaatcaatt--tttgaaaacccaaaccttctctagaatcaa |
51522743 |
T |
|
| Q |
201 |
atgcaacgatttcgacgtcgctccactatctgttgagaatcattaccttgtggtttaagatagtgaaattcgataacagagaggaagaagagagaaatat |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||| |
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| T |
51522744 |
atgcaacgatttcgacgtcgctccactatctgttgagaatcattgccttgtggtttaagatagtgaagtttgataacagagaggaagaagagagaaatat |
51522843 |
T |
|
| Q |
301 |
tttggt |
306 |
Q |
| |
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|||||| |
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| T |
51522844 |
tttggt |
51522849 |
T |
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