View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14726_low_18 (Length: 320)
Name: NF14726_low_18
Description: NF14726
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14726_low_18 |
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Alignment Details
Target: chr8 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 301
Target Start/End: Original strand, 10804710 - 10805012
Alignment:
| Q |
1 |
tcaacatcaagaaatgttttcaaggagaagaatttcgacatggatgcaccagaaaggagaagagcaatagcaccggctataaagatgaaaatataaacac |
100 |
Q |
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| T |
10804710 |
tcaacatcaagaaatgatttcaaggagaagaatttcgacatggatgcaccagaaaggagaagagcaatagcaccagctataaagatgaaaatataaacac |
10804809 |
T |
|
| Q |
101 |
ttctccatctttttaactttgtgttaacattctgttttggcatttttctatcttcaggacttacaatatccaaagatttcatgtg--nnnnnnnnacatn |
198 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
10804810 |
ttctccatctttttaactttgtgttaacattctgttttggcatttttctatcttcaggacttacaatatccaaagatttcatgtgttttttttttacata |
10804909 |
T |
|
| Q |
199 |
nnnnnnnnnnnnctacctaaagacaaaattctcaaaatgaacacatgaaattttagattaagaaataactaaccatatgcatctcaaagagaagatattc |
298 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10804910 |
aaaagaaaaaaactagctaaagacaaaattctcaaaatgaacacatgaaattttagattaagaaataactaaccatatgcatctcaaagagaagatattc |
10805009 |
T |
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| Q |
299 |
att |
301 |
Q |
| |
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||| |
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| T |
10805010 |
att |
10805012 |
T |
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