View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14726_low_28 (Length: 261)
Name: NF14726_low_28
Description: NF14726
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14726_low_28 |
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Alignment Details
Target: chr3 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 39542766 - 39543009
Alignment:
| Q |
1 |
gtttgttgatatgctggatgggatgttctcatttgtgcttcttgatactcgagataaaagtttcattgctgctcgtgatgctattggcattacccctctt |
100 |
Q |
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| T |
39542766 |
gtttgttgatatgctggatgggatgttctcatttgtgcttcttgatactcgagataaaagtttcattgctgctcgtgatgctattggcattacccctctt |
39542865 |
T |
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| Q |
101 |
tacttgggttggggccatgatggtatgtggcttcttcttattgtaacatttttacgttttaacctcaacctcgttggtgtctaagccactcaaattgaac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
39542866 |
tacttgggttggggccatgatggtatgtggcttcttcttattgtaacatttttacgttttaacctcaacctcgttggtttctaagccactcaaattgaac |
39542965 |
T |
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| Q |
201 |
cgtgtattgttaagtcaattccagagatgcatgagtttagacat |
244 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39542966 |
cgtgtattgttaagtcaattccagagatgcatgagtttagacat |
39543009 |
T |
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